# This output was generated with AUGUSTUS (version 3.1.0). # AUGUSTUS is a gene prediction tool written by Mario Stanke (mario.stanke@uni-greifswald.de), # Oliver Keller, Stefanie König and Lizzy Gerischer. # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # Sources of extrinsic information: M RM # Initializing the parameters using config directory /home/mario/augustus/trunks/config/ ... # zebrafish version. Using default transition matrix. # admissible start codons and their probabilities: ATG(0.999), CTG(0.000667), TTG(0) # Looks like chr2L.sm.fa is in fasta format. # We have hints for 0 sequences and for 0 of the sequences in the input set. # # ----- prediction on sequence number 1 (length = 1000000, name = chr2L) ----- # # Constraints/Hints: chr2L softmask nep 2 154 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 313 408 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 457 612 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 771 866 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 915 1070 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 1229 1324 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 1373 1528 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 1687 1782 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 1831 1986 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 2145 2240 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 2289 2444 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 2603 2698 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 2747 2902 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 3061 3156 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 3205 3360 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 3519 3614 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 3663 3818 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 3977 4072 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 4121 4276 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 4435 4530 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 4579 4734 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 4893 4988 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 5037 5192 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 5223 5375 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 5465 5510 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 5555 5709 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 5856 6015 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 9726 9859 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 9889 9993 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 15866 15955 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 17217 17266 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 17730 17763 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 20535 20568 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 21531 21584 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 24236 24484 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 27529 27771 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 31744 31772 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 33539 33571 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 33852 33899 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 34968 35067 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 35221 35248 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 39193 39223 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 44165 44187 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 44564 44597 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 47514 52519 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 52535 52560 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 54423 54484 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 57571 57610 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 60106 60137 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 60251 60631 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 60656 60786 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 64316 64914 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 64996 65035 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 65785 65825 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 66107 66155 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 80013 80052 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 86917 86949 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 88377 88421 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 92417 92443 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 100930 101002 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 110959 111002 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 111180 111203 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 112619 112668 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 116520 116980 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 123547 123635 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 131282 131316 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 134978 135024 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 138132 138166 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 138421 138480 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 143548 143581 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 150284 150310 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 160983 161011 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 162888 162993 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 163026 163071 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 164490 164527 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 167437 167485 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 167554 167600 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 167665 167703 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 170658 170690 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 171407 171452 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 172310 172327 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 172569 172724 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 173743 173778 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 173967 174001 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 175329 175356 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 176393 176512 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 178184 178401 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 178436 178483 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 179751 180001 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 182093 182114 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 183526 183565 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 187141 187174 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 192396 192431 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 193299 193343 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 197246 197274 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 198449 198497 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 201589 201632 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 202855 202880 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 203341 203386 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 212382 212411 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 215151 215207 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 215594 215628 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 217326 217380 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 219723 219756 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 221054 221099 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 224598 224620 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 225240 225271 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 225864 225896 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 227203 227280 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 227617 227677 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 228226 228279 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 228396 228420 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 228576 228627 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 229571 229609 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 230443 230484 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 231293 231334 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 239481 239620 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 239711 239811 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 240274 240306 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 240406 240588 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 241069 241294 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 241535 241665 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 242082 242121 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 243603 243629 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 244629 244662 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 245580 245626 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 246858 246916 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 247598 247667 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 248997 249020 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 255084 255147 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 257456 257477 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 263730 263763 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 266718 266746 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 272177 272223 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 273335 273367 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 273766 273820 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 276504 276541 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 277401 277443 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 277620 277667 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 289147 289199 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 290581 290604 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 291901 291966 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 293632 293663 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 294902 294962 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 303125 303157 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 303838 303867 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 303935 303973 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 304461 304497 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 304624 304690 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 304943 304976 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 305064 305096 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 308942 308982 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 312553 312582 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 315128 315149 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 316869 316908 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 317678 317705 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 321836 321872 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 324774 324800 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 327969 328065 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 328250 328306 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 328427 328473 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 328484 328573 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 334693 334732 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 335570 335608 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 335673 335699 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 335829 335852 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 335882 335932 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 336703 336742 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 337300 337323 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 337801 337842 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 339351 339380 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 341090 341108 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 342168 342190 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 343877 343925 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 346527 346560 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 347941 355383 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 358848 358887 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 358984 359013 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 359444 359471 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 359500 365912 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 368740 368847 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 371487 371520 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 372398 372431 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 375335 375370 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 376556 376583 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 377907 377942 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 379696 379725 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 380040 380088 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 381267 381334 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 381661 381697 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 382026 382075 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 382187 382214 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 382559 382592 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 388996 389021 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 392986 393016 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 393256 393348 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 393471 393612 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 394465 394494 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 396382 396428 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 398197 398245 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 403761 403786 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 408271 408326 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 408404 408428 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 408931 408979 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 413707 413740 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 414247 414319 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 420424 420478 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 420484 420513 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 421716 421740 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 423600 423651 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 426249 426285 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 427900 427940 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 428129 428169 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 428310 428334 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 428846 428889 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 429714 429762 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 431644 431713 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 432054 432084 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 434027 434073 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 435454 435476 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 437487 437517 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 437643 437672 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 437968 437998 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 438869 438910 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 439195 439242 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 440837 440880 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 441188 441204 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 441313 441381 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 441414 441468 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 445246 445270 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 447209 447246 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 448459 448535 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 451600 451692 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 456852 456879 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 457788 457868 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 463256 463311 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 463761 463812 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 464641 464676 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 464805 464833 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 464839 464885 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 465050 465090 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 467858 467915 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 469340 469377 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 470243 470306 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 470548 470575 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 471145 471179 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 471538 471609 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 473374 473403 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 474416 474462 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 479715 479739 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 481388 481454 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 482103 482138 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 484806 484850 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 485447 485497 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 487053 487107 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 490722 490783 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 491169 491201 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 492021 492042 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 492923 492963 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 493197 493218 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 493463 493495 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 494577 494603 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 497032 497080 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 499249 499284 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 501111 501153 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 501234 501285 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 501369 501410 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 501838 501862 0 . . src=RM 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src=RM "1.15;1;0:0" chr2L softmask nep 523255 523289 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 523645 523674 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 524856 524882 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 526643 526672 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 527500 527525 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 527657 527714 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 527848 527885 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 528773 528795 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 529707 529748 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 531297 531329 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 531492 531553 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 531629 531689 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 531709 531760 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 531879 531931 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 533885 533911 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 534891 534960 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 535679 535704 0 . 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src=RM "1.15;1;0:0" chr2L softmask nep 792675 792703 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 793158 793178 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 796563 796601 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 796608 796638 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 797008 797033 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 797935 797976 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 800558 800577 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 803168 803209 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 804973 805015 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 805303 805339 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 806796 806867 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 806964 806989 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 811451 811492 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 826185 826231 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 826419 826460 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 826557 826629 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 827078 827118 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 828953 829010 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 829246 829302 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 829592 829686 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 829861 829905 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 830419 830468 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 832431 832466 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 832920 832991 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 833945 834004 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 835061 835108 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 835187 835217 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 836621 836663 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 837882 837934 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 838043 838079 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 838465 838483 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 839383 839434 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 839440 839516 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 840676 840709 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 841053 841100 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 841292 841315 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 842531 842574 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 842716 842747 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 844548 844581 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 847739 847769 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 847848 847892 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 848064 848111 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 850607 850657 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 850660 850698 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 850943 850978 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 856022 856043 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 857043 857078 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 857951 857985 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 858997 859026 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 862955 862987 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 868414 868451 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 872780 872808 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 872986 873016 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 873052 873088 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 876504 876539 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 880922 880956 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 887491 887521 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 888057 888094 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 888388 888429 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 888922 888974 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 890008 890067 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 891865 891922 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 893168 893206 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 893959 893992 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 894786 894823 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 895143 895172 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 896347 896381 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 896898 896916 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 897340 897377 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 897764 897787 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 898194 898228 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 902370 902403 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 902734 902751 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 904531 904555 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 905645 905718 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 906283 906318 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 907178 907221 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 908508 908536 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 910880 910957 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 918634 918662 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 922014 922066 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 923071 923131 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 925304 925343 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 925954 926007 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 926067 926111 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 927803 927843 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 929126 929167 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 930083 930136 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 930354 930413 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 932441 932470 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 933332 933411 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 935652 935736 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 938134 938183 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 939979 940012 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 940033 940055 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 941052 941167 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 941334 941355 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 941939 941975 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 942643 942706 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 944180 944228 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 945191 945312 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 946359 946413 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 946465 946509 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 946832 946889 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 948246 948264 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 948867 948894 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 950679 950698 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 952872 952957 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 955569 955986 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 956982 957009 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 957667 957733 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 957941 957958 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 958388 958423 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 958868 958900 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 960553 960606 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 961198 961226 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 964257 964284 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 966382 966436 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 966919 966961 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 968660 968684 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 969233 969265 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 970250 970305 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 970778 970799 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 972610 972650 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 973377 973446 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 974132 974152 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 975639 976057 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 976935 984512 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 984992 985011 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 985569 985606 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 985841 985874 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 986757 986832 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 987918 987966 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 988108 988156 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 988645 988685 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 989865 989905 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 991130 991163 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 993888 993942 0 . . src=RM "1.15;1;0:0" chr2L softmask nep 996780 1000000 0 . . src=RM "1.15;1;0:0" # Predicted genes for sequence number 1 on both strands # start gene g1 chr2L AUGUSTUS gene 1 9276 0.82 + . g1 chr2L AUGUSTUS transcript 1 9276 0.82 + . g1.t1 chr2L AUGUSTUS CDS 7574 8116 0.98 + 1 transcript_id "g1.t1"; gene_id "g1"; chr2L AUGUSTUS CDS 8193 8589 0.85 + 1 transcript_id "g1.t1"; gene_id "g1"; chr2L AUGUSTUS CDS 8668 9273 0.93 + 0 transcript_id "g1.t1"; gene_id "g1"; chr2L AUGUSTUS stop_codon 9274 9276 . + 0 transcript_id "g1.t1"; gene_id "g1"; # protein sequence = [NREENPRLNKYRRVDNSYPRFITNEAAEDLIYKKSMGERDQPQSSERISIFNPPVYTQHQVRNEAPYIPTTFDLLSDD # EESSQRVANAGPSFRPLTYSDAVRLSQNGFANSRVSGHSSYTVRRPPALVDRSILSQEMERMDQEQYIYLIRTAAQSNSVGSHYAEPVTDNSEVKKVS # ETNKSDAPQPLTPQPTRLTRTESLHRRFASCVNLNDDFAEQFKARAADCEEKSKHRLRLAEEQRLFSNFSAIKNIDELRAYERKVVENIFQSCIAHKP # IFVLGPLDKPNVKKVTKLIPLTEEHHDRFNEITQDDKSTEIIFKFNLHITTEDICTFINGKWLNDEVINFYMSLLTERSEKRSGVLPATYAINTFFVP # RLLQAGHAGIKRWTRKVDLFSKDIIPVPVHCNGVHWCMAIIHLRNKTIRYYDSKGKPNRPVLDALEKYLREESIFKPKKQFDTSDFVIESVQNIPRQL # DGSDCGIFSCMFAEYITCDVPITFTQSEMLYFRKKMALEIVDGEL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 27 # RM: 27 # incompatible hint groups: 0 # end gene g1 ### # start gene g2 chr2L AUGUSTUS gene 21919 22410 0.5 - . g2 chr2L AUGUSTUS transcript 21919 22410 0.5 - . g2.t1 chr2L AUGUSTUS stop_codon 21919 21921 . - 0 transcript_id "g2.t1"; gene_id "g2"; chr2L AUGUSTUS CDS 21922 22410 0.5 - 0 transcript_id "g2.t1"; gene_id "g2"; chr2L AUGUSTUS start_codon 22408 22410 . - 0 transcript_id "g2.t1"; gene_id "g2"; # protein sequence = [MFLLMALGYFLGATALVSEIVGGITNKCRQIIKRSRKSAASSWSSASSGSMLRTNAEQLSHDKRKANRREAAEVAQKM # SFGMRELNLTRATLREIYGSYGAPETDHGQLDIVHTEFPNSSAKLNNIEDEESREALESLQRLDEFMDQMDNDGNPSSHTFRIDN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g2 ### # start gene g3 chr2L AUGUSTUS gene 26020 40784 0.04 - . g3 chr2L AUGUSTUS transcript 26020 40784 0.04 - . g3.t1 chr2L AUGUSTUS stop_codon 26020 26022 . - 0 transcript_id "g3.t1"; gene_id "g3"; chr2L AUGUSTUS CDS 26023 26023 0.26 - 1 transcript_id "g3.t1"; gene_id "g3"; chr2L AUGUSTUS CDS 27053 27490 0.94 - 1 transcript_id "g3.t1"; gene_id "g3"; chr2L AUGUSTUS CDS 34558 34604 0.81 - 0 transcript_id "g3.t1"; gene_id "g3"; chr2L AUGUSTUS CDS 34720 34912 0.93 - 1 transcript_id "g3.t1"; gene_id "g3"; chr2L AUGUSTUS CDS 35746 38015 0.76 - 0 transcript_id "g3.t1"; gene_id "g3"; chr2L AUGUSTUS CDS 39301 39857 0.91 - 2 transcript_id "g3.t1"; gene_id "g3"; chr2L AUGUSTUS CDS 40757 40784 0.76 - 0 transcript_id "g3.t1"; gene_id "g3"; chr2L AUGUSTUS start_codon 40782 40784 . - 0 transcript_id "g3.t1"; gene_id "g3"; # protein sequence = [MSYLSPLPEAPTEAQNKRTSRVTSSRSFGTNIKTDTSNGPSFDCPEEFGYYPHPSDCTQYYVCVFGGALLESCTGGLM # YSHDLQTCDWPRNVGCELADTSSERNLAQSQVQRQREPHAQHVPSRVRFGAAFSSQGGTQKTATVPPQYHRSPPQVIQAQVQNIPPPPPELRVSPNPV # ITSRGQPKPLIDSQEDIAKLKSENAMEFDYKEIPGEDSQLMEGYEDEDDVATGESKRRPRQLRPISHTSLKWPGQNYRAIDAPPLPQVSQQAGYSFGN # YNPYLTPPNTNPVHNQQPYGNPNYNHLPGYHSYVHQQQQLASAGPFSQKKHKLAYTGYNLSLPPPPLEDDFRPIAGSYYEAAGAAQTSPRSPNSKQHH # SNAGDLLPYLIQQLKELKEQRKHQSDNFAYFRLDNQPISPVPNQAVTPVPTISTTYYSPVDPSKLSQQVTSNGQYSTMGGFYNNQKPGQASFNPNYPG # KLISQYSIASNGHDSTTESNYFQYNIVANQKMKGVFSTAPPNQIDHSAVKVRPPVTPLHVTQSINVVSAPNLTYRIPNRLQQAPFALFPEGISYAINS # TIPESYQTFTKSVSTSATLLADMLTTTPKSKLTNFQFNINEFMANLKESDLASVNPAVNPLIKYLKDLSTDDNGNKNLPNPLVNRRPVTGSTSTLNST # ATTPQVDITPNTPAYKKRIRPEPTLPTQSTPTTMRILKGYEHFIKGIQNQLNSRNSSQSTVYNTSTTLIRMPTTTTIKSVDYYDEDYEEDDDILPPSQ # MPPYMPVSETMAPPRRHLATVRPNTESPGKGPANFQTGFLEATTTRRPFPNFTQEKQAAAEADVPSFISFPSDIFQELKQRLPKLPESNAPQSSTKIL # TTPRSVRPTSHPRPIASSTEQQSTRVRYTTIRPRIRGQQKWNTTSPVQEQKEINNHTESNTVVLNSSKQSNPGGIPLNSIHAGSSPERHRDIEYHQQQ # SQEQQKTPTPQYQSAVRQQQAHPTYRPLELPATPKPPSYENQPAYNTDYDEDINSQIEQDNAYDHPTRTPQSHSFGEQFSQKKWTREIAGQREILAAY # GGVKMSDVRGMRAPFLSVGGNKMYKMLYDSNFTYDSSMPVYENRPPSWPYTLDYKIFHDCMIPPCPTRSYPGVWQVPMVMWQDLNGGRCSMGDACSNP # SDADGVTKMIMKNFERHYTTNS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/7 # CDS introns: 0/6 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 7 # RM: 7 # incompatible hint groups: 0 # end gene g3 ### # start gene g4 chr2L AUGUSTUS gene 42763 76828 0.01 + . g4 chr2L AUGUSTUS transcript 42763 76828 0.01 + . g4.t1 chr2L AUGUSTUS start_codon 42763 42765 . + 0 transcript_id "g4.t1"; gene_id "g4"; chr2L AUGUSTUS CDS 42763 42774 0.24 + 0 transcript_id "g4.t1"; gene_id "g4"; chr2L AUGUSTUS CDS 44604 44627 0.35 + 0 transcript_id "g4.t1"; gene_id "g4"; chr2L AUGUSTUS CDS 68085 70549 0.1 + 0 transcript_id "g4.t1"; gene_id "g4"; chr2L AUGUSTUS CDS 75078 75366 0.99 + 1 transcript_id "g4.t1"; gene_id "g4"; chr2L AUGUSTUS CDS 76404 76614 0.34 + 0 transcript_id "g4.t1"; gene_id "g4"; chr2L AUGUSTUS CDS 76740 76825 0.12 + 2 transcript_id "g4.t1"; gene_id "g4"; chr2L AUGUSTUS stop_codon 76826 76828 . + 0 transcript_id "g4.t1"; gene_id "g4"; # protein sequence = [MPKRNNIILLNLPKNAREAAAAQLSVPATQIPHRHDEVQAEIDEFRPILLTHVPESGNTASKPQPANCLELAPKTGEN # YLAASSSSSSLSKPAGSVKSYLNTGRRNSVFTDTRYGSAPLSIAQRTMQCLPSLVPLNTESLGSNAMRKSPDTKLSPKGVINFIQTHGRITGNIPEVQ # AEDNTGNINVTDSRNTVTASVLISSNVSNPGTKSQDSNLFLQKSRNLKNTLNNIKAMRTGQVSLLKGAQNRNPIEDVRPLVTTTLVPQYGGEPSVEEA # LPEHMIFAAPKKKREDEEQFLQTALPQLKKTVPSQSKTKSTKLDLTISVDSHVSPPSTSISNVKSLTDAIFLGSVIRDPDLLMLILKALKWPVTAENC # DEQMSRLKSSKFAVIMSDTNLLQDTDLTQLLGPYLAPMLPVVQQQDQHPLSSAIGSASSNHSSQATKDVLKLADLSSAMPYKLPPETSVQLVPSSPTE # QEPQPVRHKKAVSVPTVKRHQRKMRALDLPAVDKTRRIISLSTSKAAYVSNELSNINSVLFSQFESNPADAINEALISLLKQQQQETKDQRKTRQSCI # GSDSAVNLEDIVLIDPQPPLAVDPHNVKYLEDDYVSPQSQPGSQYNFKRRKTDIRSSEPSEVVVLDNSGSPNEKNSKEVFPSTKQTLSRETKKSAVTV # RKESLGQLKQAPTSTVPEDICDPKARAINAKENPEVCEPVPDNGGSDDIDDSKAGSVSVRKSEVKAALGQKLLEAIGLSQLGADAAPENSRDTLRSAL # KRSIKQAQEQQLQLKRGNHEEPVKQLADSTTKLSAAESADEHKKAIAERELALLNRGFKAGEENTISLKEFSINLVYNNDSRDVALHINPRLPQNYIV # RNTKVQDIWGNEEVSSALPFLLSRGEEFSIQVLVTEACYMISVNGQHFAAYTHRIPYRDVRILEVKGDFLSLLLPYKMESKCMSVYPGACTVALRRVM # DAMSLFYEKRSEAHRRKHFKVIQCPRPGLCFVFHGMILMAWKMGTRGKFFIFNLPAEPGKVFLDANIAY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 13 # RM: 13 # incompatible hint groups: 0 # end gene g4 ### # start gene g5 chr2L AUGUSTUS gene 83268 92232 0.37 - . g5 chr2L AUGUSTUS transcript 83268 92232 0.37 - . g5.t1 chr2L AUGUSTUS stop_codon 83268 83270 . - 0 transcript_id "g5.t1"; gene_id "g5"; chr2L AUGUSTUS CDS 83271 83641 0.47 - 2 transcript_id "g5.t1"; gene_id "g5"; chr2L AUGUSTUS CDS 84029 84277 0.62 - 2 transcript_id "g5.t1"; gene_id "g5"; chr2L AUGUSTUS CDS 92139 92232 0.86 - 0 transcript_id "g5.t1"; gene_id "g5"; chr2L AUGUSTUS start_codon 92230 92232 . - 0 transcript_id "g5.t1"; gene_id "g5"; # protein sequence = [MTASTSSVVVAVGLRLIRTTKNTDRAKNEDADSPNSNDRDAGFCSASSESEGGDDLVVEHARSGSPDIRPKGTDSADS # KPIALVRNKRKSSEPFKVVGLTTPNSKSMPGPPSSATSLSDEDLNKTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAVPAY # ASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQSVPSIATCLEAVTSTIQTEGKVKRKKDE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 2 # RM: 2 # incompatible hint groups: 0 # end gene g5 ### # start gene g6 chr2L AUGUSTUS gene 95292 103442 0.21 + . g6 chr2L AUGUSTUS transcript 95292 103442 0.21 + . g6.t1 chr2L AUGUSTUS start_codon 95292 95294 . + 0 transcript_id "g6.t1"; gene_id "g6"; chr2L AUGUSTUS CDS 95292 96649 0.4 + 0 transcript_id "g6.t1"; gene_id "g6"; chr2L AUGUSTUS CDS 102554 102906 0.83 + 1 transcript_id "g6.t1"; gene_id "g6"; chr2L AUGUSTUS CDS 103006 103439 0.6 + 2 transcript_id "g6.t1"; gene_id "g6"; chr2L AUGUSTUS stop_codon 103440 103442 . + 0 transcript_id "g6.t1"; gene_id "g6"; # protein sequence = [MRICMYAPNLYNSYIATVSFRSDLPHHVQECVNCYTRPWKVVEYAQRHLSSSCYIRERIDRGTISPSAYQQEFEIDKD # FSSFEEAFAYKSESCTPSSRQSIASLASVSSCTDTLTPRGSWASFDLRRSVNDPLIPNLLDNVPPEHIDQSNEARRQQDRQMALFSLYPESEAEENIE # RRLLAEIPVEHMGHRIQVNCLQLRLELEVEPIFASMAIYDAKERQKISENFYFDMNADSLKRMLSSHVQCADISTQSHSAIFEISYPSNDLFLVIRLE # KVLQGDINNSVEPYLKEDKDKYREKVKSNAVDYCERLGKYRMPFAWTGIYLTNVFNGDNFESKDAGAAERDSFGNACGSSLGTAPSSNSLDRKSSTSS # FDQLRRKANDMSGTLTRRGSLERKEKHRSWSPDDFANVVENFRPITITVPSFFKQEADKMKDEDLYKILPELKRPSSVMKKACTQLVSSFRAGLERTK # RGHAGGDTAWEEEKLRSYKNSEVRLVEIQEKLCSEGEVINKDHCHNLANEHEALLEDWFIHKQTESPDLQSWLCIDQLTVCCPLNTYGPDCLTCTECN # GNGKCKGDGTRKGNGKCKCDPGYAGPNCNECGPEHYESFRDEKKLLCTQCHAACGEGGCTGGGPKSCRKCKKGWSMDSEAGCVDINECLEQQRPNPCR # PQQFCVNNEGSFSCLECDRSCDGCDGDGPDMCRKCADGYELKEGKCHGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 0 # end gene g6 ### # start gene g7 chr2L AUGUSTUS gene 104473 105809 0.36 - . g7 chr2L AUGUSTUS transcript 104473 105809 0.36 - . g7.t1 chr2L AUGUSTUS stop_codon 104473 104475 . - 0 transcript_id "g7.t1"; gene_id "g7"; chr2L AUGUSTUS CDS 104476 104918 0.47 - 2 transcript_id "g7.t1"; gene_id "g7"; chr2L AUGUSTUS CDS 105512 105809 0.36 - 0 transcript_id "g7.t1"; gene_id "g7"; chr2L AUGUSTUS start_codon 105807 105809 . - 0 transcript_id "g7.t1"; gene_id "g7"; # protein sequence = [MLVFGESILNDAISIVLTASITQSANVNAEASTGEAMFSALKTFCAMFFASAGIGVIFALISALLLKHIDLRKHPSLE # FAMMLMFTYAPYVLAEGIHLSVLGGSTMPLLKYLKPGKKRRARGSGRNAAEEGGRRNGSGRKRSKSISLSKTREWGQAIDSEHLSELTEEEDVTFTQA # RDRFGRMDRKYFIPFFTRRFNSQELHECKSQMADLTNKWYQAIRVSPLDSDESDEEIGLAASTSQIHLTRS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g7 ### # start gene g8 chr2L AUGUSTUS gene 105959 106642 0.98 - . g8 chr2L AUGUSTUS transcript 105959 106642 0.98 - . g8.t1 chr2L AUGUSTUS stop_codon 105959 105961 . - 0 transcript_id "g8.t1"; gene_id "g8"; chr2L AUGUSTUS CDS 105962 106642 0.98 - 0 transcript_id "g8.t1"; gene_id "g8"; chr2L AUGUSTUS start_codon 106640 106642 . - 0 transcript_id "g8.t1"; gene_id "g8"; # protein sequence = [MRVWVAYSAAALLLLVHAGPESISGQEVPQSKTSSNTTTTDNSSSIHTVSDVFVNSPLGNVTPSISASGNASTTKRGN # ASTLVTDPPLIDSHAVEQEHNSSLSLFFVICVIMLGILLIHSMLQTGFQYLPESIVVVFLGAFIGLSLNVMSGQNGSWKREEVFSPMGFFLVLLPPII # FESGYNLHKGNFFQNIGSILVFAIFGTTISALVIGAGIYLLGLGEVAFRQV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g8 ### # start gene g9 chr2L AUGUSTUS gene 108686 113542 0.37 + . g9 chr2L AUGUSTUS transcript 108686 113542 0.37 + . g9.t1 chr2L AUGUSTUS start_codon 108686 108688 . + 0 transcript_id "g9.t1"; gene_id "g9"; chr2L AUGUSTUS CDS 108686 108809 0.88 + 0 transcript_id "g9.t1"; gene_id "g9"; chr2L AUGUSTUS CDS 110755 110877 0.99 + 2 transcript_id "g9.t1"; gene_id "g9"; chr2L AUGUSTUS CDS 111005 111117 0.77 + 2 transcript_id "g9.t1"; gene_id "g9"; chr2L AUGUSTUS CDS 112690 113369 1 + 0 transcript_id "g9.t1"; gene_id "g9"; chr2L AUGUSTUS CDS 113434 113539 1 + 1 transcript_id "g9.t1"; gene_id "g9"; chr2L AUGUSTUS stop_codon 113540 113542 . + 0 transcript_id "g9.t1"; gene_id "g9"; # protein sequence = [MPQKTNGHSANGCNGSNGNSYDMEDGATFLFTSESVGEGHPETVAKTGMILLCGEITSKAVVDYQKVVRETVQHIGYD # DSSKGFDWKTLNLLVAIEQQSPNIANGVHINREEEDVGAGDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFN # QGSAVPKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFTK # VDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDYGTSHKSQKELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSW # EEAKPLEIDN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 3 # RM: 3 # incompatible hint groups: 0 # end gene g9 ### # start gene g10 chr2L AUGUSTUS gene 115713 121049 0.15 - . g10 chr2L AUGUSTUS transcript 115713 121049 0.15 - . g10.t1 chr2L AUGUSTUS stop_codon 115713 115715 . - 0 transcript_id "g10.t1"; gene_id "g10"; chr2L AUGUSTUS CDS 115716 116095 0.84 - 2 transcript_id "g10.t1"; gene_id "g10"; chr2L AUGUSTUS CDS 118136 118292 0.8 - 0 transcript_id "g10.t1"; gene_id "g10"; chr2L AUGUSTUS CDS 118361 118827 0.48 - 2 transcript_id "g10.t1"; gene_id "g10"; chr2L AUGUSTUS CDS 119007 119076 0.63 - 0 transcript_id "g10.t1"; gene_id "g10"; chr2L AUGUSTUS CDS 121047 121049 0.37 - 0 transcript_id "g10.t1"; gene_id "g10"; chr2L AUGUSTUS start_codon 121047 121049 . - 0 transcript_id "g10.t1"; gene_id "g10"; # protein sequence = [MIDEILGMLRLKDTLNTMAQKLSGVLAAGGRTVICSIHTPSAKIFEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLC # CPITYNPADFIIEVACLEYGGSYHEPMVEAVGNGKVARWSPPAVEGETTTTKTDTTSGASSFYERDQFDEEISPKLLEAKCSWWLQYKLLLVRMLIQM # WRDKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMFTIVIAYLYLPMMPVLLYLQVQTEHTIVEEWSWQDHHSNRDLGSYNYYTALDYDQNFDGD # ENSNDNEYEEDDGRATAAGLDRDEDPCERSCPRYYRPVCILRNGRNMTFATLCEFHNQVRCANDLRRQGHGYVVPIFQYQHDGGC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 0 # end gene g10 ### # start gene g11 chr2L AUGUSTUS gene 123129 124872 0.89 - . g11 chr2L AUGUSTUS transcript 123129 124872 0.89 - . g11.t1 chr2L AUGUSTUS stop_codon 123129 123131 . - 0 transcript_id "g11.t1"; gene_id "g11"; chr2L AUGUSTUS CDS 123132 123512 0.93 - 0 transcript_id "g11.t1"; gene_id "g11"; chr2L AUGUSTUS CDS 124087 124872 0.96 - 0 transcript_id "g11.t1"; gene_id "g11"; chr2L AUGUSTUS start_codon 124870 124872 . - 0 transcript_id "g11.t1"; gene_id "g11"; # protein sequence = [MTRNLSGGQKKRLSIALELVSNPPIMFFDEPTSGLDSSTCFQCIHLLKMLAAGGRTVICTIHQPSARLFEMFDQLYTL # ADGQCVYQGSTKQLVPFLSTLNLECPSYHNPASYVIEVSCGEHGDHTRKLVDAIDNGKRDVRSSADYAGLKARNDLVKVQNLKAILDKNDASSVSGRK # YEDNLTLNNGLLNGMVNDIVKEGNVSSALVTTNERGDAMIDVEKSVNCTTALLTEEITSPERYPTSQFHQFWVVLKRTLLFSYRDWSVGLVVGAAMNV # QNGVFLAPVMSVPFLLFSGFFVSFDAIPVYLRWITYLSYIRYGFEGTALATYGYGREKLRCFQTYCHFKSPITTLEELDMVNANFTLDIVALIVIFVV # LRISAYLFLRWKLKTVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 0 # end gene g11 ### # start gene g12 chr2L AUGUSTUS gene 125068 128983 0.95 - . g12 chr2L AUGUSTUS transcript 125068 128983 0.95 - . g12.t1 chr2L AUGUSTUS stop_codon 125068 125070 . - 0 transcript_id "g12.t1"; gene_id "g12"; chr2L AUGUSTUS CDS 125071 125266 0.98 - 1 transcript_id "g12.t1"; gene_id "g12"; chr2L AUGUSTUS CDS 126110 126227 0.99 - 2 transcript_id "g12.t1"; gene_id "g12"; chr2L AUGUSTUS CDS 128800 128983 0.99 - 0 transcript_id "g12.t1"; gene_id "g12"; chr2L AUGUSTUS start_codon 128981 128983 . - 0 transcript_id "g12.t1"; gene_id "g12"; # protein sequence = [MTKNDNANLLNDNRLGTAGAGQLKAQIVPAQPKTLQHLPKRPAVDLAFHNLTYRVKEGNRSNAKTILKGVSGRLRSGE # LTAIMGPSGAGKSTLLNILSGYKTSSIEGSVTMNGAERNLSAFRKLSAYIMQDNQLHGNLTVQEAMTVATNLKLSKKFSKPEKHSMAS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g12 ### # start gene g13 chr2L AUGUSTUS gene 132483 133682 1 + . g13 chr2L AUGUSTUS transcript 132483 133682 1 + . g13.t1 chr2L AUGUSTUS start_codon 132483 132485 . + 0 transcript_id "g13.t1"; gene_id "g13"; chr2L AUGUSTUS CDS 132483 133679 1 + 0 transcript_id "g13.t1"; gene_id "g13"; chr2L AUGUSTUS stop_codon 133680 133682 . + 0 transcript_id "g13.t1"; gene_id "g13"; # protein sequence = [MALRVAGLFLKKELVAPATQQLRLLRTGNTTRSQFLANSPNTALDKSILQRYRNLETPANRVQATYLWIDGTGENIRL # KDRVLDKVPSSVEDLPDWQYDGSSTYQAHGENSDTTLKPRAIYRDPFKPGKNDVIVLCDTYSADGKPTASNKRAAFQAAIDLISDQEPWFGIEQEYTL # LDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEAHVVACLYAGIDFAGTNAEVMPAQWEFQIGPAGIKACDDLWVSRYILQRIAEEYGVVVTF # DPKPMEGQWNGAGAHTNFSTKEMRADGGIKAIEEAIEKLSKRHERHIKAYDPKEGKDNERRLVGRLETSSIDKFSWGVANRAVSVRVPRGVATAGKGY # LEDRRPSSNCDPYAVCNAIVRTCLLNE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g13 ### # start gene g14 chr2L AUGUSTUS gene 138695 139132 0.93 - . g14 chr2L AUGUSTUS transcript 138695 139132 0.93 - . g14.t1 chr2L AUGUSTUS stop_codon 138695 138697 . - 0 transcript_id "g14.t1"; gene_id "g14"; chr2L AUGUSTUS CDS 138698 139132 0.93 - 0 transcript_id "g14.t1"; gene_id "g14"; chr2L AUGUSTUS start_codon 139130 139132 . - 0 transcript_id "g14.t1"; gene_id "g14"; # protein sequence = [MTFSNQTGIGSVTTINEEIASPVSRILILQHSGRGKPRTIYNASTKLCDLQNVFNSVPLFKPAKDNMLKQSNYTLSCP # LVKGTYVMINMRVSPKNPLLSLLYQPKQTFSVSGGLFEELSRGRRLRALSTYFMTGKVVKKYCGSNE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g14 ### # start gene g15 chr2L AUGUSTUS gene 139737 140933 0.58 - . g15 chr2L AUGUSTUS transcript 139737 140933 0.58 - . g15.t1 chr2L AUGUSTUS stop_codon 139737 139739 . - 0 transcript_id "g15.t1"; gene_id "g15"; chr2L AUGUSTUS CDS 139740 139954 0.73 - 2 transcript_id "g15.t1"; gene_id "g15"; chr2L AUGUSTUS CDS 140114 140933 0.7 - 0 transcript_id "g15.t1"; gene_id "g15"; chr2L AUGUSTUS start_codon 140931 140933 . - 0 transcript_id "g15.t1"; gene_id "g15"; # protein sequence = [MGVDKLPEIRALSEVVEPHVSGSRLLNYHTSSLTKPGDNYGSVLLAIHARLQKSNGESFEEQLVAKVPPIDPKYWQFF # QPEQTCLTENAVYKILAPALATLQDEAGVPDESQFKGFPRFYGCRESLESNSSKVDQNAVLVLENLRSSGYVSGQRLKAFDLAHTLLALKYMAEFHAL # SLALRILRPEVFREQVRPFFKKFDWHAEAPEWKSVMKAETLEDIRRATNNDSRLVARMKELSDQFFEFLAAAPDRPDGPFTSIIHCDFWINNIMFRYG # PTGTPVELKIIDFQTAQYDSVVHDIISFLLSSVDTAILEVEFEHMLEAYYEAFERCLRRVGAKLEVHTFKE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g15 ### # start gene g16 chr2L AUGUSTUS gene 141657 142487 0.83 - . g16 chr2L AUGUSTUS transcript 141657 142487 0.83 - . g16.t1 chr2L AUGUSTUS stop_codon 141657 141659 . - 0 transcript_id "g16.t1"; gene_id "g16"; chr2L AUGUSTUS CDS 141660 142487 0.83 - 0 transcript_id "g16.t1"; gene_id "g16"; chr2L AUGUSTUS start_codon 142485 142487 . - 0 transcript_id "g16.t1"; gene_id "g16"; # protein sequence = [MGEVPKIKNLPQVIEPHLPEGCTLDSYSTSYLTKPGDNYGSIMLSVQAKIRSADGGIRDLPLIAKLPPLTNDLYWQIF # QPERTCITENAVYQYLSPELDKLQLESGILPAQIFDGFPRYYGSRVSLDNRATKVDRDAVLVQENVTTRGYRPGNRHRPYNLAETVLILHYLAQYHAL # PIALRLKKPQVYEEYVRPYFKKFDMNSNIDQAETEIMNKEILKDIKLVTSDERDVNRVKELLDIFQAFQASNDVDDGPFTTLVHGDLWINNMMLKYGM # RG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g16 ### # start gene g17 chr2L AUGUSTUS gene 143426 144094 0.57 + . g17 chr2L AUGUSTUS transcript 143426 144094 0.57 + . g17.t1 chr2L AUGUSTUS start_codon 143426 143428 . + 0 transcript_id "g17.t1"; gene_id "g17"; chr2L AUGUSTUS CDS 143426 144091 0.57 + 0 transcript_id "g17.t1"; gene_id "g17"; chr2L AUGUSTUS stop_codon 144092 144094 . + 0 transcript_id "g17.t1"; gene_id "g17"; # protein sequence = [MTISETNIDGYRYGIPSGQHQEQPIYPFLPNENGDQLVGQLEDDDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAG # PIEGVRIPTDNNGRPRNFGFVTYQRLCAVPFALDLYQGLELFQKKVTIKQQGGKQLPAYNQSRLRNQFMMEALPQPSPLRHARHSLHNGKPYDRNPFG # HNADQRRRSDSSVMERNRLKPQQHHQHMQGGSRRSDQRSNNKRRLL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g17 ### # start gene g18 chr2L AUGUSTUS gene 144374 145795 0.95 - . g18 chr2L AUGUSTUS transcript 144374 145795 0.95 - . g18.t1 chr2L AUGUSTUS stop_codon 144374 144376 . - 0 transcript_id "g18.t1"; gene_id "g18"; chr2L AUGUSTUS CDS 144377 145795 0.95 - 0 transcript_id "g18.t1"; gene_id "g18"; chr2L AUGUSTUS start_codon 145793 145795 . - 0 transcript_id "g18.t1"; gene_id "g18"; # protein sequence = [MGKRPFSSTGLWNDCKVEVLNREHNPNEAFGELVVDAIKVQTESEPTAHEELLKLNGSLNSLHSKTESIKTQLEETTP # QLSRAQSVKSLLIEEDIESSNSFVVVEEVENELESSPAKGEEEVPLQEELATPVKATKLENHTFGPKLVPTHDEIVIHSRSVSLDSLYGTRPASKQGS # MDTSTSTAENTSQTGSQIGNTSVPAKAQHTPLKHKSKTSYFLRAQRRISPSKQPIKMSQAELFPQNMVRFDRPREALLKTFDQLDSSNWEVNVSGLKS # MVRLIRYHAETLDNQMHMTCIQLTRSVRNLRSQVARASCQAAAELFSLKSTSLQQECDDLVCALLHRTADTNRFLRADANRALESMVDHAQPQKILNI # LATKGAQHQNALVRTTSAKLLFRLVERLGSDRIYAMGRESRDKFFVVGANLLLEGSLETRSYAKSLFRALSENHNYQRLLLEVIPPRTYRNVEKTLRS # ITR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g18 ### # start gene g19 chr2L AUGUSTUS gene 147506 152911 0.15 - . g19 chr2L AUGUSTUS transcript 147506 152911 0.15 - . g19.t1 chr2L AUGUSTUS stop_codon 147506 147508 . - 0 transcript_id "g19.t1"; gene_id "g19"; chr2L AUGUSTUS CDS 147509 147659 0.73 - 1 transcript_id "g19.t1"; gene_id "g19"; chr2L AUGUSTUS CDS 148338 148825 0.64 - 0 transcript_id "g19.t1"; gene_id "g19"; chr2L AUGUSTUS CDS 148969 149226 0.49 - 0 transcript_id "g19.t1"; gene_id "g19"; chr2L AUGUSTUS CDS 151115 152911 0.56 - 0 transcript_id "g19.t1"; gene_id "g19"; chr2L AUGUSTUS start_codon 152909 152911 . - 0 transcript_id "g19.t1"; gene_id "g19"; # protein sequence = [MKIQRRAEAPIGAVQLTPLWEHILRTRRLPETIFPSAMYAEFHERLQDPEWQVRQHALRVLVDVLVVMQDEADGHMER # EQLIGLLVENLGHQAPTVRKGALDCLRVYLAETAIPETVMLGILDAGLTKQVPADSEHMGRLSCGVLLSVPALLQSIMHTAQRHRIVHSTVERVVAHM # DQVVQQEITVKVLSKIRELLGVHEFEEIMGNVGRGDTLSRYYQLSQVYGVSGKSKTGGEVKAGAWRALPREQGWRNGNAVQNLDTTLQIQSNCLDMGK # IIMETEIKINDDTVTMRILEADTETEESDSPTRIFSNEEDGTDLICHPLSSSGSTHQEPNIGAGIVKVISDSELDEPHIKAGSVSEPGTPSRGLKRVT # FGGEIVKMRTPDSDAASSTNNSRSPTQTNQSITVSSSEDAAISDLVSSDEKSTLSRPVNDKRTTALVLEIPFDNTKPLPQDRSLCSQPHRHQSNAQSE # PSSNSPRNRQENKARLSPSPSSPGFRSRSTSPTGSNNISPKVPHKQIEVLHNLQRDPSPRSQRRSEDMDGNGDGKALHATGNPSSSPTQPLISRTRSA # STMSPVSPATPKSWEDLDIVNLKTLLELRSGDWRNRLMGIGQLELALSSSSNLALVQPYLDSLLRTLLSSERHFEVSDLKRELLVNLISRLPLDNLEE # RTPQILSGLCRQGNAGANRFRDHALQMSIFALMTFPGTCFDISLLTTQAVYSLLNRKRRVRQAALEVLAVLADISSIKEVLTIVSETTDGVELGPMVL # EATSVRLSRLQLPIVTPDSGVLFVFNQTDPPGARRFGADVDWIHQGEGSASPNTIKRRRMRAASSQRNVLGGAEAKNKNDPFPSMQRGSKSHSVERPN # YPKVSYSIPKSQQMIRKKFQHKDSFTKLGDEPPGQS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 0 # end gene g19 ### # start gene g20 chr2L AUGUSTUS gene 153677 154849 0.97 - . g20 chr2L AUGUSTUS transcript 153677 154849 0.97 - . g20.t1 chr2L AUGUSTUS stop_codon 153677 153679 . - 0 transcript_id "g20.t1"; gene_id "g20"; chr2L AUGUSTUS CDS 153680 154849 0.97 - 0 transcript_id "g20.t1"; gene_id "g20"; chr2L AUGUSTUS start_codon 154847 154849 . - 0 transcript_id "g20.t1"; gene_id "g20"; # protein sequence = [MSLQLRQLAMWFALRRRFGPSIDENNPPDVPIKEAVKLILHPIICEKLAKVYDANGLMINIDLTHSLEGEEVEKLVKL # NKEAFPAKASHQKRIEISRGLLEKQYQPSKVKAETYEKYFQIPCSNVEESIKLTSIDLQGPLICVAGRYRKLSRELSHTPWILNGQRLMEDSIEEIII # RHVGPHFTEKLGKITFMSSGREDVDVRCLGKGRPFVLEIPNAKRSCLTKDEAFAMERAVDASGMVSIHHLQVVPREELTHIKTGEEQKKKFYRALCAL # QEPVSVKILEQLQISASFNIQQKTPIRVLHRRPLHTRPRTIYSVTAKVHRGNPKALIIDIVTQAGTYIKELVHGEFGRTTPSLSSIIGKPMDIQALDV # VGIDLDWPHEVDNSKHKE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g20 ### # start gene g21 chr2L AUGUSTUS gene 155611 155950 0.42 + . g21 chr2L AUGUSTUS transcript 155611 155950 0.42 + . g21.t1 chr2L AUGUSTUS start_codon 155611 155613 . + 0 transcript_id "g21.t1"; gene_id "g21"; chr2L AUGUSTUS CDS 155611 155784 0.42 + 0 transcript_id "g21.t1"; gene_id "g21"; chr2L AUGUSTUS CDS 155858 155947 0.99 + 0 transcript_id "g21.t1"; gene_id "g21"; chr2L AUGUSTUS stop_codon 155948 155950 . + 0 transcript_id "g21.t1"; gene_id "g21"; # protein sequence = [LTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKRECADLISDFQECVGMQKQLMRFHAMRNERYKQWLKGERKGQEF # FADPPRVDAY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g21 ### # start gene g22 chr2L AUGUSTUS gene 156732 157388 0.75 - . g22 chr2L AUGUSTUS transcript 156732 157388 0.75 - . g22.t1 chr2L AUGUSTUS stop_codon 156732 156734 . - 0 transcript_id "g22.t1"; gene_id "g22"; chr2L AUGUSTUS CDS 156735 157388 0.75 - 0 transcript_id "g22.t1"; gene_id "g22"; chr2L AUGUSTUS start_codon 157386 157388 . - 0 transcript_id "g22.t1"; gene_id "g22"; # protein sequence = [MPIGGTRCYFIASRRPSASQQILLKIVLMALEYLHTSFPGCIRSHVPHPQGVIHGICQDKVSFGGQGHSGNRIRMPSQ # MVQDSLFSNVPDFDFVVDPAANYLFSSVTKTNSCDLKRGFQSVCRVFFPGVPDFYGAIIASRAEELLTPTRALNAVHEVAMPLEPPLPLARGYVPKGQ # SFISGAGKNVRSIRRKVSFHNSTAVSRHGHHILAVFVHLPDV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g22 ### # start gene g23 chr2L AUGUSTUS gene 179215 204717 0.03 + . g23 chr2L AUGUSTUS transcript 179215 204717 0.03 + . g23.t1 chr2L AUGUSTUS start_codon 179215 179217 . + 0 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 179215 179252 0.42 + 0 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 183761 185082 0.94 + 1 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 185152 186123 0.62 + 2 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 186193 187016 0.65 + 2 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 187482 195747 0.69 + 0 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 196477 199575 0.37 + 2 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 199637 199743 0.6 + 2 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 199903 199983 0.56 + 0 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 200120 200315 0.98 + 0 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 200376 200675 0.91 + 2 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS CDS 203993 204714 0.84 + 2 transcript_id "g23.t1"; gene_id "g23"; chr2L AUGUSTUS stop_codon 204715 204717 . + 0 transcript_id "g23.t1"; gene_id "g23"; # protein sequence = [MYWNSESASAIRWSTEEPPTNSFERNYYDRTTSRLVTQYQANNSTSLANSNSSPSSVSASASVFATAAGGSSERSRNR # DRPYRNGSASVQGGGINSSNTTTTTAACTAGGSGSGAIGTGTGGLVGSGPGGVPQALGDRSSTQNIHQNHQSARVAPPQSWYEAATAATTAQLKSSGG # SGNAGASAAVGFTMSSSPINHHPHQHPHLQNPQHPHYTSSPVVGAGSCPSAAQGQPQIQSQSQTTAVHRSVAYAGSAADDLLNTATSRNMLLHSSKLN # KLLKGAGATGSGGERSGSESPGRAGGATPLTTTSTITNNSFSSNSLNNTITTATPTMPTIASGAAGSVGLGSGAEAGVCSNSGTASGDILNVAAVLAA # AVDNGVPTHPIRTRHNLHGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTVNSVTVTSNSSNPSGTAVTVSSAG # VGGGCGSSSSSSSSSSSSGSSCLTANPVVHSEDNRPLAIRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVS # HDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKSTRTLFIGNLEKDITAGELRSHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKM # DGEHLGSNRIKLGFGKSMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFASRECQDA # FYDKQEKQQQQSSGSNPRFSRYESSASSLQSRSRASSFSRHQNNSNDDCSPINTPGGASSGISSASNLINQSTSINISNIGTNACSAMPAPSLASAVV # SCNVNASGTVPASTSMPSGVSSSSSSLPMSPAALAQRHRMVRNARQTVDCDFNEVGRLRFRSSEEVSGGAGNSTQFEDVRCDSPVTARQGSAVNCFTG # PTAAVGESIDGTLNNNQITGGAEGFTGSGGSILSRRRCGKTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKRIKMDYHHHHHHSNASGVESTGE # HSSINKPSPLLLSNCDVIHDPLNRKSEIRRVSETPSGSPSIKFPGHLPSAPQSLMLSCRRPSIDVGALSALSSSSAFRHGIVGASSMDQQHMMNASAA # AKRRRVTTTMQQPSSSSTTNSSSGSGLGGISSLTPADEYHHHVSRGRGHQLHSHHSHEASGGESADGSRPGTPLCDERPEVLPTEPRRLPPPRERVRE # RTRDVMWLPLPKFGVLFFQQQQSRSSGGGGAGNSYLQQQLGGGSTGGLGCIGAASSSACSLNNSSLNASQGMGSCSGSTFLPSPSSRYWRSSSHHQNQ # QNNHQQQSQQLHGSSSSNTCLMASPARPRSLSSNSSDSDVPGQNAGGSPSLDERLRNFEENYERWSGGSSREHISGHTPSSATPSWQLSMHMNLSTGL # NSHQTSSASGNSNSSSGTVSSSASNSRHKFLDIDELQPSDIVKSVLAKKSVFDDDFQRLNKNQWYDPSSSDFALGSSSNIVTGSSLVANVSRHPGGPC # SGNTSPALPNLAATKATPIIGNCSGGLGNSTGSKSAGLLQRLSSLSPMNSPQASMSPYNSPSPSPSVGGVTACLGQLTKPAAPGTASAGLSGGTAASS # SSPAANSGPTKGLQYPFPSHPPLPNTAAPPPAVQPAPPPLPEMGKQSRLTGQSSGNNLTKSLSVPDGPQSSPARVQLQKSASVPGSTNVGAPSSLSLD # STTASVETSASISSSTSNGNSSLTSAAIHVQKPQQSTFVEEEHTKKSGTSTSQSSSSSSKKISSTHDKLHSKHNNRSESDKKIKKSDKNASSSDKRKN # SSTSQSSKSATPRIEDDSSEADDTADKAEKNQRHEKEKKERQEKREKDLRKQVEREEKDRKAQQEEREKEDRKAKEEEKEREREKKAQEDREKKEREE # RELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQREREHREKEQSRRAMDVEQEGRGGRMRELSSYQK # SKMDIAGEASSLTAIDCQHNKENAMDTIAQGTPGASPSTPSDNTPKERSRKLSRNSPVRLHKRRLSSQESNHSAGGGGSCGGSSHQIHHEDYVKRIRM # ENSQNISVHSSNQRLNDRRDSKEHKSSSFKEDKNSSSHISRPHGCGGSSASSSKHHHRRDKHHQKGSASSIETNSSIEVVVDPISQTKHNLNTSEEEL # QSHQPKREKEREHFSSHANSSSSRHKSKRDHHHHREKKRHSVAESTNTDEEHTPQQHNPHRRISAAGSGSAGELSSAATNTSSGKLHHQHHRRSVERK # SSRGSDEGHHSSSKSLRAKLMMLSSADSDDTDDASKKHSIFDIPDDCPNVSMYDKVKARSCKNMQRQAEEKKIKAKFSQLKQSRAKKKRSTSYDGDSD # TEFEDRQHRNSGSSSFHGRYPGLSSSDDDDDEETHQRRISSDSDAEHGGQDNQGASTLADANRVRQMQQNLRRLCDGDDSSEDEIRRNVMKHSHFGKR # NSNSTRIASDSESQSQPAPDLTIKQEHPIAPAQEIKREQLSDEEQKFKSRHDSNSSIEERKLKTEREIKTELGDFYNSSEYTYTGKLKEYSPETRKKH # KKSKRRLKSSSTADTSAAQTPLVMTPLTPSIFDVHSSSECKTKFDNFDDLKTECSSIPLEISAGERRKHKERKEKKREKLRNMTEATVPNSPTTNDTS # SEKLSKEERHRLKKSKKSKSMDNSCNTKIYNSSGAHPSTSPSLPATPTSAPSTAQTSKRGEDKMEFIFGIISDEEESQFPEQAETNKDIIPSSVSTTG # PIVSAALQTYKQEPSTPNSKNEEAHIQLTVHEPEQQQQLERSRLSGGSSSSSHADRERHRREKREKKRREKSQREQQNQIHQKSSKVETKVDDDNSVD # MDEAGRALEAQLMSDFDTKPISEEATPSTAATYRSDMTDVFRFSDNEDNNSVDMTKQGVKSEQQEQHKSKDKKKKKKRSKEEKQEKLLQQQRRESLPN # VASTSSAPPTPGKLTVNVQAASKHADLQLDAKHISSPPVCKPSPSLPCLIGDDDDDALHTPKAKPTTPSSRGNDGLTPSREKPRLISPIPKTPTIANS # STLSTQSAETPVSSGTVISSSALATTPTSSTAAGVSAAPGLDNSPTSASAQCKKKESFIPGFDGQLDDRISESAVQSISAEFNSTSLLDNIADEPKIP # VASPPRATKPLDKLEESKSRVTISQEETESAVSALLGESFGTSSTTDYSLDGMDEMSSVNELETPTLVIAEPDEEAALAAKAIETAGEPASILEEPEM # EPEREAEPDPDPEAEIESEPVVEVLDPEELNKAVQSLKHEDMMDIKADTPQSERDLQIDTDTEENPDEADSSGPSLKIDETVQSSSSPEKSISNNSPT # PRETANIDIPNVESQPKLSNESTPQPSVITKLPFLDTPKTVPAGLPPSPVKIEPPTISKLQQPLVQPVQTVLPAPHSTGSGISANSVINLDLSNVISS # CSNTSAASATASASASISFGSPTASQNAMPQASTPKQGPITPQQAIRTQSLIMQPPTISIPEQTPHFAVPQMVLSPQSHHPQQPGTYMVGIRAPSPHS # PLHSPGRGVAQSRLVGQLSPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNSPTTSKVNSYQPRNQQVPQQPSPKSVAEVQ # TTPQLMTIPLQKMTPIQVPHHPTIISKVVTVQPQQATQSQVASSPPLGSLPPHKNVHLNAHQNQQQPQVIAKMTAHQHQQHMQQFMHQQMIQRQQHMQ # QQQLHVPPPQTQGNAIHYPQNQGKDSTPPGHVEPTPAMSAQKTSESVSVIRTPTPTTGLAVISANTVGSLLTEENLIKISQPKQDELIEQDSKEVDSD # YWSAKEVNIDSVIKKLDTPLASKDAKRAVEMQAIAPAPIPNPQPGNQSMAQETALPTTSMSVNNSNDHDTEDETETRQLPPAKPPIPTVGRPPGRGGS # AKRGRQPRGAKKVGGFPLNSVTAAPPGVDSLVVQPGDNGVQTRLRKPVTAPVTRGRKGRPPRNLLLQQQQLQQQQLDIQRKGMEMVTSATSSTPLPTP # IPTSSVLTAAEKKARNQALTQAQEQNQVASQVGTGQDIYEFHEDGGEEPKPKTISSVAPSAEDQRPRLILTINKTQPSIKNISEMEQTIQQQQQQQSE # VISNTDPIGGDNSESCNTRKSRRLQEKEDRSTVDDIIEDVVRNTNTPTGTGPHLPKGAQTPPRRSGRNAQAKKTDAVQIINAVGRPRRSKDRKTIGEQ # TANLIEEVTASNATVAASHLAPPEGAGVESHVPQLDAKEVEPVSVVTPISTPAPVSVAAPVTVPVPAMVPVKPTMPQHPKKKAIAAAEIESYQAINSS # IPSGGLPMHQTAAPATQKITGGVADAVSKALVDPVTGVITAGMPQGKEGNLPAATAAAPANSSNEDGQAAPPPQLQHQQQQQHPQQPPQQQANLQINT # TLIPSGLPNPITALGKSVQLETSAAALLNKPVSVLVKGNASQVIQQQQPQIVAPAKQPIILQQNPLPTVLHHAQHTTVRPPQPLKAHVLNREKNIQQQ # LTPTKQAVAQPPQHAPHSGHMLLTDTAGNQQLVQPQIIARHLQQQQHLQVNVPPPTAHSPHSPRIPSQQQQLGPGASISPQQQQPQTVVIKQAASAAQ # PQILHVVSSKASVVPQPQQQQLPPTSSTGPHLQLAKPNYSYAPTVLTPTLPAVQQQQQQHLYKQNNQQKGAQIQMPPHGIIMPTHPGMLLQQKLPAHL # QPQQHQLNPSPPPGKPNPVLHGLQSGQIMPGSVGSPPPVSAAVLKTAQQQVNSVVPVAGIRTAIPNISPQSQPRVSPLVLPPGISGVPPFDASLHDLG # AYVSGRRTQSPPPAHQQASPITPNDSTYRGVTASRDFMLYQHHLMRGGDYDDKMGSSPPLELRRPGSGPPRTIAVPHSLQSPQDRTAADSPQMAQVYV # HNTRIPPAHFSEIASRGLYDSGALQLEPPPAHRPTATISVVVPQQMPAVSSGSPFIGRDGSVQPGSHHHPGKAMDMQLDEMDRMSMIAAVGLSLAKSS # TPALQFLRFRGKINIQRPKAPHYERARVVAVTQPKYPELPKAKSCFKTRAERTQQQQENPYNEIIAREVRNWLDHSRLVAFFHLSSITADDIFRVRVQ # LHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFHSNHCIVFSPDPEKTAALLRIVRRVPQMVLLGGIVEETMLSRNQLVAYAQMPGLHAVQAQLVQTLS # QAPGHLIQQLQAHQNSFVQVLDVHAKNQMNEETPKST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/11 # CDS introns: 0/10 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 7 # RM: 7 # incompatible hint groups: 4 # RM: 4 # end gene g23 ### # start gene g24 chr2L AUGUSTUS gene 205044 205864 0.57 - . g24 chr2L AUGUSTUS transcript 205044 205864 0.57 - . g24.t1 chr2L AUGUSTUS stop_codon 205044 205046 . - 0 transcript_id "g24.t1"; gene_id "g24"; chr2L AUGUSTUS CDS 205047 205212 0.74 - 1 transcript_id "g24.t1"; gene_id "g24"; chr2L AUGUSTUS CDS 205272 205864 0.58 - 0 transcript_id "g24.t1"; gene_id "g24"; chr2L AUGUSTUS start_codon 205862 205864 . - 0 transcript_id "g24.t1"; gene_id "g24"; # protein sequence = [MLKDWLIRRRENPYPSREEKKQLAAETGLTYTQICNWFANWRRKLKNSEREKAKKSWGHLIKNYNHNARGNVEQFSIS # SEDSIWEEEMHSCPAEDDEGDDNEEFSSHSTGSDGNANNEPSSPYKPILFVGSAGLTERISAQTGGKTKYKHQMMEKYMRDSSTAKTTSQQGTQLNKW # LESAAKFTPDRNNYHIEWNMTRQKASSNSSCGQAIFTTDVSGAGRGGRWMLHHKDELEAAEALANLAFNCRQRWHHI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g24 ### # start gene g25 chr2L AUGUSTUS gene 207512 209858 1 + . g25 chr2L AUGUSTUS transcript 207512 209858 1 + . g25.t1 chr2L AUGUSTUS start_codon 207512 207514 . + 0 transcript_id "g25.t1"; gene_id "g25"; chr2L AUGUSTUS CDS 207512 207631 1 + 0 transcript_id "g25.t1"; gene_id "g25"; chr2L AUGUSTUS CDS 207711 208608 1 + 0 transcript_id "g25.t1"; gene_id "g25"; chr2L AUGUSTUS CDS 208729 209855 1 + 2 transcript_id "g25.t1"; gene_id "g25"; chr2L AUGUSTUS stop_codon 209856 209858 . + 0 transcript_id "g25.t1"; gene_id "g25"; # protein sequence = [MDESVRYDRCHQVQLGVFNESQLSSVEEDVQNLPQQGTGNILFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAE # MPRRRLLLEWQPNDSIMIADDSQDQGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQTIRFMRKGANGVHSEF # FFQHGNADLFVRSMRDQHLIENAETSRSGGEVYAILTTENQKLKKTFAELDIGQIKASQLPRESWLPNKLAGILGNIPDYVQPPFQRSPKSRPGVLIS # GDRQTSPDNYQIIGLSGSTNSACSSNGQSRGGSAEKSPADSELETLNAQDEKIVNNLPDRQRVERGHPLTETQWLEFQTPDGRISDSARIKELIFRGG # VVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNMKAQWLAMTTTQEANFCGYRERKCQIEKDVKRTDRSLQFFAGEDNPNLTLLQGILMTYV # MYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVWYKRELNS # EDVLKLWECLWTRLPCPNFHLLFSVAILDQETRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVAEGIYLQLKGSETLPNDIRSIIGEPLLPAAAGEE # IDGGMVDEEPTYSDDGFDELVKELTPEEKVRQQALLEEACERSLFLQFH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g25 ### # start gene g26 chr2L AUGUSTUS gene 212185 218864 0.55 - . g26 chr2L AUGUSTUS transcript 212185 218864 0.55 - . g26.t1 chr2L AUGUSTUS stop_codon 212185 212187 . - 0 transcript_id "g26.t1"; gene_id "g26"; chr2L AUGUSTUS CDS 212188 214942 1 - 1 transcript_id "g26.t1"; gene_id "g26"; chr2L AUGUSTUS CDS 215034 215676 1 - 2 transcript_id "g26.t1"; gene_id "g26"; chr2L AUGUSTUS CDS 215773 216007 1 - 0 transcript_id "g26.t1"; gene_id "g26"; chr2L AUGUSTUS CDS 216077 216275 0.96 - 1 transcript_id "g26.t1"; gene_id "g26"; chr2L AUGUSTUS CDS 216345 216573 0.99 - 2 transcript_id "g26.t1"; gene_id "g26"; chr2L AUGUSTUS CDS 216632 218864 0.57 - 0 transcript_id "g26.t1"; gene_id "g26"; chr2L AUGUSTUS start_codon 218862 218864 . - 0 transcript_id "g26.t1"; gene_id "g26"; # protein sequence = [MELAAKERESQRLQLIPKKWNRREEYEFLRVLTGYGVDLHVSTPMASSNGSSLSPDWTKFKQMAHLERKSDETLTDYY # KVFVAMCKRQAGLKLSESERGLEGIIEEIEKEHAKLILDRLEVLAKLREVARNPMLEERLKLCTKNADTPDWWEPGRHDKELITAVLKHGLYRSETFI # FNDPNFSFGESEKRFIRELEAQIQRTIKLEAFNAEKAEKLAAAEKDAATEKAAATEKAAAEKAASVKNEVIDLDDELMTNESVIKKESPVTPIKEEIK # SEESPEKHDTADNLEDKNSDAEESTKIKGKEDFNPETTEKEALDESTNLNKDKSSTETLVPEIEDSKPSEDKMEVEELPVAENGEKEGSPEKCSDAED # KKFSEEKPSSPAVPDGKVSEMEADEAAPNTEENCSGDSESPEKECEDKVVEKVEEEKGENSYEKAEEQKEETEKLEKSSIESEPSEKSETVLEPEVAV # PKKSTGDQDILDLVAGPSDPDDDEVMKEKEKAVEEECKKQAAELKARFPDLEVIQPATVKQQKLEKPKLEMCMIRWFKDFALERRIAHIVACVESGNW # PVDSKYSAFATCKGATDLSIALHESIPHLSSLERRSTTPDVITITTDQGVTKHLQTSHMQQVASSASAASTSSGVPQVTQSKPSSSNSLPGLDAKSIN # AAVAAAVAAAAAGGNATSLSSLLPGMSLSAATGSSAGGVSGLSVPSAGSGVGKKRKRHIAIDVETERAKLHALLNSSTMAPKDWESEIANMEALSGSS # GRGRGGNSSASSGMQPPPAHQHASLSRQSSGQFSKPAVPAMKTPPPSMGAPMDLSSSLPKMNMTEMLKSASSSGAIDLSEVQDFSMPSKKSSVHAALS # SAFPSMGNKSKLDDTLNKLMKKNNCTIEEPVIGKEKKRKKLDEIVLGLSAAKEQKTFPDPSLPSSKKPQIPPSVSVTPANLQSSSNQQSNQKPFTITV # TTVPGKSKSGSSNSGSGTGGSSSASGGGAGGSGLSALQNMAMGGLSSKDSLNALLAQTMATDPQTFLKQQQKMMQFLPPAQRKAYENMLAEMEQAMKI # SSKFSTNSPHDVKVNKWLSDMTSPLGDQLSIDYVGGGGASGSGSGNSRRSNRQQGNSQQSSSAAQLQKQQQQQQQQQQQQQQHSMPGPQNLTGEEPVP # VINKQTGKRLGGNKAPQLKRLMQWLTENPNYEVDPKWLEQMQNPMSTPSPRPASMESGYGSSAVKSHGGRPLSNLSSTSSSSHTQQQSSAAQSQAGGN # SGSSKKNSRQQTAASAALDQAALQFGSLAGLNPSLLANLPGLGAFDPKNPLAAFDPKNPLLSMSFGGMPGMGNIPGLGNLNNMNLFASLAGMGGLGNL # AGMDTQSLAALMAAAGPTLGGLTGASGGAGSGKSQAQSQSSATSSSSSASKKKQQQQQQQAQNEAAQLAAAISASTGGSGASGGKNAAASASQLAAGF # PFLFPNPSLLYPPMGLGGLNPYSLGSSGLGSAYDQLAQQYNLLNGATSSASNTSSTQSKSHQSQSKSSQSRNTTASANSAASLMNAMASMGGGASTVT # TPSTSASGSGRGRQSSSRNQSQTTPTAADMAQLSSLLMPGADPHLLESLSRMSNMDLAQATRLMSSLGMPPLSGTPSSSGGGNTSTSKRSSQAANEAN # VQAKEQQKWLESLARGALPTDLAALQAFSQGKMPSTSGSNTGTSTSSSKSSKAAATAAAAQLPQIPGMSSDFPQAFLAEMAAQAMAAAGGSLPLSGPG # SLASLAGLTGGSAGGGGSSASGSTSHSSSKRQREQDAFKQQMDYYTKTLGLGSGISLIPTSSAGGSSASSSAANAAAAAYAAALDAEQQHQQQQKALS # KRARGDLHPTKEELAALAAGLPLNLGASMSSIEKSLRGGSSSSSSSTPAPMTAEQDKVTLTPLNASGGGSGSSSSSAAAAGLAANLPSQTTITIAPPI # SSGASTSSERSERSESRISLTITNAADAAKLPPPYEEADELIIQPILKKPTAANPGSSHGGSVDDLDTAENTSAANLSGSSSSSAAAAAAAAAEENRR # SSNRLKRPRSGNEQGSGSVEGQPPEKRRELRSTRHTRSSADASTLNLSTGSESGAEERNE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 4 # RM: 4 # end gene g26 ### # start gene g27 chr2L AUGUSTUS gene 226107 232524 0.07 - . g27 chr2L AUGUSTUS transcript 226107 232524 0.07 - . g27.t1 chr2L AUGUSTUS stop_codon 226107 226109 . - 0 transcript_id "g27.t1"; gene_id "g27"; chr2L AUGUSTUS CDS 226110 226508 0.62 - 0 transcript_id "g27.t1"; gene_id "g27"; chr2L AUGUSTUS CDS 227372 228281 1 - 1 transcript_id "g27.t1"; gene_id "g27"; chr2L AUGUSTUS CDS 229173 229382 0.5 - 1 transcript_id "g27.t1"; gene_id "g27"; chr2L AUGUSTUS CDS 230758 231034 0.88 - 2 transcript_id "g27.t1"; gene_id "g27"; chr2L AUGUSTUS CDS 231948 232101 0.4 - 0 transcript_id "g27.t1"; gene_id "g27"; chr2L AUGUSTUS CDS 232292 232379 0.38 - 1 transcript_id "g27.t1"; gene_id "g27"; chr2L AUGUSTUS CDS 232511 232524 0.39 - 0 transcript_id "g27.t1"; gene_id "g27"; chr2L AUGUSTUS start_codon 232522 232524 . - 0 transcript_id "g27.t1"; gene_id "g27"; # protein sequence = [MYFDRWGRWSELLELGQFKRGWRDVDVEDCARIILLYCLQVYKGDEKIKTFIWDLITPTEDGEVQKISRDHSGLHNLV # PRGRNAKGRNGGKSNKESTGVSTPAPGSASGSNSGNTTPAHKSSALDGSDKDSGGINASAVAAAVTSIHDPNHWSKKEKYDADAYLEGAYKKHLGRHA # NNELPIRPPPTPDQVPSSWWNPICCDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGAAGDDLAVTSLPINEDDANSKHDDGDEVDDDGTTTTKDS # DSTKLTGGDNKDSLLDPERPSSSGKSSSENASGGNDKTESENDATTVSESSYKSEVLPGKGSDLDVSVAQQDALSATPELANTSDPKMNKNDAQVSAS # VSCDPADSSSPEAAGKAQGTGVQTGDAGELDIESEKKDNEKETKESTGDAPAVEAKKDSAAIARAEGDKTESCTNNATTNISTTTTTTTITNTTTTTN # NPSSKAANSNNTTDHANSNSHLGLDEEESVAGSYPPTVAAVEDATTMWPSMQDLNTRLRRVITAYQRNYKKEELKLQQKAKLQALVSSTPPLSVPTTP # TLQSMQMQLQSGSGSGGSGIGSSAQHDASGRSLQALMQSQGASTSAAAAAAASSAGGSCSGSGQVGMGGAGVMPAMPTAADISLMLSILNTTDVNQLA # NLDINKLAMYLVSMNNVR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/7 # CDS introns: 0/6 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 6 # RM: 6 # incompatible hint groups: 2 # RM: 2 # end gene g27 ### # start gene g28 chr2L AUGUSTUS gene 232575 233965 0.49 + . g28 chr2L AUGUSTUS transcript 232575 233965 0.49 + . g28.t1 chr2L AUGUSTUS start_codon 232575 232577 . + 0 transcript_id "g28.t1"; gene_id "g28"; chr2L AUGUSTUS CDS 232575 233154 0.49 + 0 transcript_id "g28.t1"; gene_id "g28"; chr2L AUGUSTUS CDS 233217 233962 0.93 + 2 transcript_id "g28.t1"; gene_id "g28"; chr2L AUGUSTUS stop_codon 233963 233965 . + 0 transcript_id "g28.t1"; gene_id "g28"; # protein sequence = [MSTSGHSLKTDTQSRRSVKSHPSKLHVFEYAAPQDLDVVAIIYKFYLEDFRNFTEEERQLRLSSLDAIDMLHTIEQVH # NDVATLRLENHIMVEFLEKNDPKLLLGLRQRRTSILRKLQTKRGSAQGSHGVNSRHSSSKRSIPMSVNQLVSISGISAPEKRRGMDYKLNFKAKAEMA # EKRAAEVEKRVADIERNAMTEVKQLRAKIEELRFRSEETIETENNFMLHFLRDENDVAFLESATERQIERKLRKFTSNWFKNARALLGTMKLTIVSLQ # ETCQQHRADLITKSDLSGILTAVDFEKLIIKRTELVNQLEEKNIHMAGLKGVTGKTSLAMTEEKQAMMNLETEMRTVLNRTDEVTRAIQKLEKEVAAV # QMHNTKDYVTLDELRAQLQDYEAPSVSEYIERKEEAHVLEKEEKMLQRKIYILNMKLNNAIRRRNRLEEN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g28 ### # start gene g29 chr2L AUGUSTUS gene 233993 242287 0.64 - . g29 chr2L AUGUSTUS transcript 233993 242287 0.64 - . g29.t1 chr2L AUGUSTUS stop_codon 233993 233995 . - 0 transcript_id "g29.t1"; gene_id "g29"; chr2L AUGUSTUS CDS 233996 234174 1 - 2 transcript_id "g29.t1"; gene_id "g29"; chr2L AUGUSTUS CDS 234237 239396 1 - 2 transcript_id "g29.t1"; gene_id "g29"; chr2L AUGUSTUS CDS 241311 242143 0.82 - 1 transcript_id "g29.t1"; gene_id "g29"; chr2L AUGUSTUS CDS 242244 242287 0.67 - 0 transcript_id "g29.t1"; gene_id "g29"; chr2L AUGUSTUS start_codon 242285 242287 . - 0 transcript_id "g29.t1"; gene_id "g29"; # protein sequence = [MDGNAQNMFHGNHQGDPYYRYDAAAAAAAAAAANPRAMGPPGGYPPRHRPPHPLQQQPQYPSYQPTAENLYGLGAADH # QAAMGLGVGVGVGAGMGDLSGWGAAPSVPGQAAAYPGAGLGAYGHPQAAPPSQQQRQSNASAYRQHMPAYGQQDQQKLASYGAQQSMMAGYGSLAPQQ # QQQQQPPTPQQQQQAQQVQQQAQQQQQQQQQQSQQQARLPQHYPQAPGQHPLYPGVGAPTVQAGQPPTPQAYAHSPYGSPMQHQPSRGAPQHVGYGHT # GLDQASAYGQHVPGGAPPAAVAAVASNAASAAAALLDSNSQSSNAEFEKNQSEGEGLGVVEGVIANETDLPQDENSVSKTQDITLSTELPTIQDDLQE # KPTAEMEQTQLGQSLGDLSKSLLEEPKTVEESGEDKSQSAPGVAPPADPIIPVTQPPQQQMPPIGMPMHPIAPGYEAQAQGQGHMPPMMPPYGGAPGM # YPPYPMLHQQEIAALQQQIQELYCMPPGHELQHQDKLMRMQERLNLLTQHEVNDQCAGGPQCLLFQNVPPMYGPPGNPLLNQQMVESPQVSSTTGRGR # GKSANKPRKPRAKKGEKAQVGQQQDLMDISGNVAMGAANAVSSIPTTQLPVSEDCVTQGAGDTSVVGMLEYSEGMGDLSQDVHSANELDTSTDGSGKK # KKPRKPRTPKDPNKPPRDRTPKAKKPKDPNDPNSTETPAAVKKRAGASKRRKQYGEDGAEQTGEGSEVEDNKPLVPKAGSADGEAETTSGGTGVDGES # PDYDDIPVSKIPRGSNEDEKEAEAGDETVDSVPDSAGDPASTPSRRDRKRSTARSRRNANSEEGGSARKNRGSLSAKALKKRRNRGRIVPESDGEDDT # LDRTPPPSPPPDSEMDSNKRRSSRNTQRKKYIDDVMLRFSDDENSLLVASPVKKDKKPSANASNSNAGSDVEKTEPQSGAEGDAAQEVGEEKSNLPLD # ESSQLEASSSTSAVAEKERQISTDAANAAMSSKPNYVYINTGDEDSMVVQLVLAMRMGKRELILDKPKEKAPEPKQDEEKSELDEATTDKPEGDEKFK # TEGESKKDLTDSEETKLESSAMEVDSKEESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPET # VLEKMEVDEKANDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKESLEIEGEKERVKEGEESVKKENDEKTEADMENKPEPVFIDVEEYFVKYRNFSYL # HCEWRTEEELLKGDRRVAAKIRRFQQKQSQQLNIFENIEDEPFNQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQ # YLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLST # IPNWQREFEGWTDMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLN # LEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILE # QNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDIL # EDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTY # EREMFDKASMKLGLDKAVLQSMNTQGSKDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITMESEKGSTFSKASFAASGN # RSDITIDDPDFWTKWAKKVDIDPDACERDETEDLVLSEPRRRTQIKRYGHEDVMELNSEESSNENSDEEGGIGLRSRRRKEKRDRAREKKGNDEYIPR # ERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 5 # RM: 5 # incompatible hint groups: 2 # RM: 2 # end gene g29 ### # start gene g30 chr2L AUGUSTUS gene 251194 251696 0.44 - . g30 chr2L AUGUSTUS transcript 251194 251696 0.44 - . g30.t1 chr2L AUGUSTUS stop_codon 251194 251196 . - 0 transcript_id "g30.t1"; gene_id "g30"; chr2L AUGUSTUS CDS 251197 251464 0.93 - 1 transcript_id "g30.t1"; gene_id "g30"; chr2L AUGUSTUS CDS 251527 251696 0.46 - 0 transcript_id "g30.t1"; gene_id "g30"; chr2L AUGUSTUS start_codon 251694 251696 . - 0 transcript_id "g30.t1"; gene_id "g30"; # protein sequence = [MFFEIKYAPSICDSNNRKDMIKIAQNYCTKGKSKNVIFSSGAAHEFQLRGPYDVANLAFIFGLSEDQGKNAVDGHCRE # LFLKAEARRLGKTIMFLKGNGPIIYSDSSEDEKSTEDEMKGLKPQIGKADAFEVKDGTEHAIKRLKVA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g30 ### # start gene g31 chr2L AUGUSTUS gene 251955 252212 0.78 - . g31 chr2L AUGUSTUS transcript 251955 252212 0.78 - . g31.t1 chr2L AUGUSTUS stop_codon 251955 251957 . - 0 transcript_id "g31.t1"; gene_id "g31"; chr2L AUGUSTUS CDS 251958 252212 0.78 - 0 transcript_id "g31.t1"; gene_id "g31"; chr2L AUGUSTUS start_codon 252210 252212 . - 0 transcript_id "g31.t1"; gene_id "g31"; # protein sequence = [MTIQKIPTTSDILVAAGYKTVAIDQSFDHSKKDPGKRGSEMFPEPHKIEHLRKEFQDKLRILQRITILYVDVNVAHAM # VGTLDDG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g31 ### # start gene g32 chr2L AUGUSTUS gene 252663 254379 0.86 - . g32 chr2L AUGUSTUS transcript 252663 254379 0.86 - . g32.t1 chr2L AUGUSTUS stop_codon 252663 252665 . - 0 transcript_id "g32.t1"; gene_id "g32"; chr2L AUGUSTUS CDS 252666 253145 0.92 - 0 transcript_id "g32.t1"; gene_id "g32"; chr2L AUGUSTUS CDS 253220 253385 1 - 1 transcript_id "g32.t1"; gene_id "g32"; chr2L AUGUSTUS CDS 253446 253890 0.97 - 2 transcript_id "g32.t1"; gene_id "g32"; chr2L AUGUSTUS CDS 253956 254379 0.97 - 0 transcript_id "g32.t1"; gene_id "g32"; chr2L AUGUSTUS start_codon 254377 254379 . - 0 transcript_id "g32.t1"; gene_id "g32"; # protein sequence = [MVNDEDAAHQRPSKPTGYNFYRSSLGSPRYVVAPMVDQSELAWRMLCRRYGAELCYSPMYHANLFATDPKYRKDALQT # CPEDRPLIIQFCGNDAQQILDAALLAQDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEIVSTLHAKLAVPVTCKIRIFEDLEKTIRYAKMLEAA # GCQLLTVHGRTREQKGPLTGVANWNYIKNVRQHIKIPMLANGNILALDDVHRCLTETGVDGVMSAEGNLHNPAIFKGVSPPVWQMAHEYLELVQLHPC # PSSFIRGHLFKLFHHIMNIRQNSELRQYLATANQLVQFQAVVQQVRAKYEPFHKGEVPYEPEQMAAGSEEDLPLSPWLCQPYIRASPESHRQKIAEKV # REAEDPNRTKRQYFDKDGKEISRKRMKKLRRRQRRPNKTEAQIQHRHERRLEYCSECANPQGSKCEFQLCRVCCKDRCYNNDRDCPGHGIFIKSRRAR # AKLFEEHIAPQDHQKVTRTSDDDLTIAPTDAQEPL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g32 ### # start gene g33 chr2L AUGUSTUS gene 263782 266688 1 - . g33 chr2L AUGUSTUS transcript 263782 266688 1 - . g33.t1 chr2L AUGUSTUS stop_codon 263782 263784 . - 0 transcript_id "g33.t1"; gene_id "g33"; chr2L AUGUSTUS CDS 263785 266688 1 - 0 transcript_id "g33.t1"; gene_id "g33"; chr2L AUGUSTUS start_codon 266686 266688 . - 0 transcript_id "g33.t1"; gene_id "g33"; # protein sequence = [MSTTAAGLKSGPKGAYGVRSETDHIITISTAGLTESHSESPAKGVVTPVRKPHSLGSEDSPENIIPGEQAETNKKPLH # LCRLSQLVSYQSNIADVQHRKGRRLHGLQLPLHPLQIFGWLVLLLFGVASYWVLIPAFHARIQGPLYGLITGLYLVHIASHLTALLTDPADKELRRVH # RNDRIVPEFDRSKHSHVIENGRCHLCNIRTSSNRTKHCSVCNKCVGKFDHHCKWLNHCIGSRNYVAFLMCVVSAVVATLVIVAAVVAQIVFYYIQPDW # LSFYWCPTESSHTIESGDFINITLSLSNGTMMLIEQHTSEEDVHQEMWDEEQANMTISTLPTLLENFTAIIEASATRPGISPTNHTETQPVVTGIGLN # ETIFMFLLGVLGLLAAVSAGLLLHLCFFHIYISFLGLTTYEYIRNHRQAQDAKTKQLLEGAPGVRAPKNGNVHFSASLPEPHNPSKSLPGGQQLYCCS # SAPHPSQHSQESVGQTEQSLRLHCCASSREFHQSGQAIYVCSLLEEAVPQIQVEPDTLSSFHCCSSFAASSLQRRVSLAKGSLISAEPRHLRPATYLQ # YTEQCTLCTFRLRRGSGPGTGSSGAVSSAGGSSSTRTLTSQTGGSSASATAAGNISKHQRWRRKWNCCAAVPDSPDLPNDLLAALTFRESEEAAAAAK # LNAQELPIQFIRTLNGGLDQELPLKATTATPTPPRSSRLRYMLRLLGRYRRPRCRHGAHHGIAAKEHQNIGGSAIKQNQIRPLQLQAAGRGYANSTAT # PTPPASSPSRSSLESSDLSTSTSPSCGKKELMLLPTSVIRDDSVTTYTLTLPPALPPPTRRKMNQTTQELAELAETLGFASNLQHSQHNSQTNSRTLP # SFGNVYRRQRRKHFLRTRSPTLSPIHESGLSNPTSPQPLRHHHQNLANSNSNPAKAMSSPMLNRNSGSANSSALLVQNLCSLAGETLRNSASNSSLQS # LSSNSSST] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g33 ### # start gene g34 chr2L AUGUSTUS gene 269192 271314 0.45 + . g34 chr2L AUGUSTUS transcript 269192 271314 0.45 + . g34.t1 chr2L AUGUSTUS start_codon 269192 269194 . + 0 transcript_id "g34.t1"; gene_id "g34"; chr2L AUGUSTUS CDS 269192 269389 0.97 + 0 transcript_id "g34.t1"; gene_id "g34"; chr2L AUGUSTUS CDS 269458 270606 0.55 + 0 transcript_id "g34.t1"; gene_id "g34"; chr2L AUGUSTUS CDS 270661 271311 0.83 + 0 transcript_id "g34.t1"; gene_id "g34"; chr2L AUGUSTUS stop_codon 271312 271314 . + 0 transcript_id "g34.t1"; gene_id "g34"; # protein sequence = [MIDILSLPRRNKVSGNPALLKMISYKTGLPINSLPGWELIPLNCKLPMLKCPGNQVIFSKNKIGQDFKSGKQEFECSV # TEHIPEYNPLHDSNLKTFYSNERNLKRLRENGEITQDNDVICNLKDFNQHRQELHKSQLYYILQAYKRRESEQYDRMLIANAESITKKDHQNLAARHQ # CTEEVLARKKLQEQERHERKVHLLNITYEKFKRLENLATMQNMLLEHRKMLTNMRVAAHISMCQDLMRKLLIKQKKLFQFKKDRFNKNMRILRKQRLV # KNTEHQIQSWRKRLDERIANQRRIEYLLQEVEKEREAFIDRHKAHYREKWQRIQDEIKERAQKAITARQPKRKRRKKKKSTLQERKPSFCDEYQATFE # GLLDSDLCYALNAAIAMEGQTALSFAPDDPIYKAAQYILDYIISGLNDDLSEDECALQVLISRIKDFVCDAKKYVHYKAYQIIGFARDHKAMEVPPSM # AKQPKNHSRASHVSFSGVASTIGVGSYEIHPFVDVRPCSERRATPAGSLASLVVSQIGEQVIQDKVRLPHLNRNQIVFIEHYLVKFKRDLLVGLDKLV # FAAIQCHFENRMMEVREELLLLDRNYLFEQIARGILSYAVNPLNYQSVLKLAVSVQSCEIIWELQQTMLKPGIDPRGQNHPVSCGTEQERETLALCIP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g34 ### # start gene g35 chr2L AUGUSTUS gene 271967 273634 0.56 - . g35 chr2L AUGUSTUS transcript 271967 273634 0.56 - . g35.t1 chr2L AUGUSTUS stop_codon 271967 271969 . - 0 transcript_id "g35.t1"; gene_id "g35"; chr2L AUGUSTUS CDS 271970 272401 0.56 - 0 transcript_id "g35.t1"; gene_id "g35"; chr2L AUGUSTUS CDS 272555 273634 0.93 - 0 transcript_id "g35.t1"; gene_id "g35"; chr2L AUGUSTUS start_codon 273632 273634 . - 0 transcript_id "g35.t1"; gene_id "g35"; # protein sequence = [MHNSGGQSGWNLSGEERKPFSNYGRNNQQRRSSGGGGRGSHSQNRAANGNWPDAGSEGGQNGNAFNKFRDPQQELDNH # QPNKRGGRRNRGGGGGGGGWGGRRGNRGRDSNRRGGRNNSWQPKDQHVSPGQSNMLYFDNVGDFTEDPPLPRSSPAPSSLRQESLPPVTFAADLTPPP # PVSVAPPDVAVTPEEPTVPLINIKKEKEMEHKSKIKQFVKAEPKSPKKKKVNSSRSSSTSGEESEPEPGEMVVNTKAVVVPSPKAKAIKTPVASTPKP # KAVKPVSSSDSSTSDSDTDDEQSHPPAKSKKMEKNTEEDVVCMGSQERQFTITDEEESTEPEDDKKARKQKNKGKTVDVCGICDKKSFVEFAMQQMTA # FHCEQGFGFPAGTVTAPVSAKPKKDKKASIKKIKKSSQKRMKVEPKDHDEEDDEEDDDEDEDDSSESDDSESSEEPHPAPVSKQKRKRGTKASVSAAA # SLPPQVFPFPLLGAPGAPFNSMMYSYRAPFNFSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 2 # RM: 2 # end gene g35 ### # start gene g36 chr2L AUGUSTUS gene 273986 274651 0.95 + . g36 chr2L AUGUSTUS transcript 273986 274651 0.95 + . g36.t1 chr2L AUGUSTUS start_codon 273986 273988 . + 0 transcript_id "g36.t1"; gene_id "g36"; chr2L AUGUSTUS CDS 273986 274648 0.95 + 0 transcript_id "g36.t1"; gene_id "g36"; chr2L AUGUSTUS stop_codon 274649 274651 . + 0 transcript_id "g36.t1"; gene_id "g36"; # protein sequence = [MNSTNPKKTEDNDRHERQLQSRTKDWGKTKFKPKKYVQPKPALVPQATATPWQHVKNDIITDSSDRGHQDVDSEDARQ # FMQQRQKNHRRNVIEANRSQDTTWEPFNDEKPSTERKQQLSTDVENFTFKERNFFRKQLTLGFNLTKKNATLKSALKDLKYRQLTKDKFELERSNHTR # RNVKSSNAKEAKGSHPFQKMRDNAHPYRKKGPNRRNPFQKGPHNE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g36 ### # start gene g37 chr2L AUGUSTUS gene 274947 277142 0.9 - . g37 chr2L AUGUSTUS transcript 274947 277142 0.9 - . g37.t1 chr2L AUGUSTUS stop_codon 274947 274949 . - 0 transcript_id "g37.t1"; gene_id "g37"; chr2L AUGUSTUS CDS 274950 275251 1 - 2 transcript_id "g37.t1"; gene_id "g37"; chr2L AUGUSTUS CDS 275319 276497 1 - 2 transcript_id "g37.t1"; gene_id "g37"; chr2L AUGUSTUS CDS 276739 276903 0.91 - 2 transcript_id "g37.t1"; gene_id "g37"; chr2L AUGUSTUS CDS 276974 277142 0.9 - 0 transcript_id "g37.t1"; gene_id "g37"; chr2L AUGUSTUS start_codon 277140 277142 . - 0 transcript_id "g37.t1"; gene_id "g37"; # protein sequence = [MDVAPAPPASSGGDHSTQQAPISPNQNANQAPVALAKATTIENGVQTGGAKKPESCAVEPTHSTDASQKDDDEGKPKT # ELADKVLITICSADRKIKKTFMSLPTRKDVIDKAHKYGLCGNTIVLESNGCEICEDDVLLFAAKEKILLMLLAESEEYVVLPPPSPLNRSERAGSSVD # PSFYANNSIVSNPNDSTVSNDETMSLSSVTPSSAKSSALFKEFSIPWSKVPGDIMKLLKGKGSLGKRLNTLANVLVEALREISAHIPIRIFRQVAQQA # AEKYPDSLLEKDREGQFIATTPQSLISKMINRNNALNKPQKRGSSGTFEIHIPNKKRKFGGGASNGDAKSLALNRDLEHKKELLISSYRGSSPLEQSV # IIEYMKECFPLQRSFFNNSEKIPDITAIKDNWPYIFDKAVLYQHFELLMSIDPRALEKRLATEKDRFFRFFKSSKNKKISSLDETNANFLRGIAYYFN # EDPDYIFKHLENSSLSKESLQSTNPTNAPWVALVNSPITTADGVESQMEAKVYIEGQIMATFAAKDEDLPDILAQLICYYYTFNMMYPKEANQTLEFI # VVYFLQHSPEQVRSAKKSVTTNGKFNHLIAKLANVHG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 0 # end gene g37 ### # start gene g38 chr2L AUGUSTUS gene 277931 281514 0.72 + . g38 chr2L AUGUSTUS transcript 277931 281514 0.72 + . g38.t1 chr2L AUGUSTUS start_codon 277931 277933 . + 0 transcript_id "g38.t1"; gene_id "g38"; chr2L AUGUSTUS CDS 277931 278323 0.95 + 0 transcript_id "g38.t1"; gene_id "g38"; chr2L AUGUSTUS CDS 278667 279067 0.96 + 0 transcript_id "g38.t1"; gene_id "g38"; chr2L AUGUSTUS CDS 279185 279805 0.92 + 1 transcript_id "g38.t1"; gene_id "g38"; chr2L AUGUSTUS CDS 280110 281511 0.94 + 1 transcript_id "g38.t1"; gene_id "g38"; chr2L AUGUSTUS stop_codon 281512 281514 . + 0 transcript_id "g38.t1"; gene_id "g38"; # protein sequence = [MFLEVAILCLWVVADASASSAKFGSTTPASAQQSDVELEPINGTLNYRLYAKKGRDDKPWFDGLDSRHIQCVRRARCY # PTSNATNTCFGSKLPYELSSLDLTDFHTEKELNDKLNDYYALKHVPKCWAAIQPKCEKINGEDMVYLPSYEMCRITMEPCRILYNTTFFPKFLRCNET # LFPTKCTNGARGMKFNGTGQCLSPLVPTDTSASYYPGIEGCGVRCKDPLYTDDEHRQIHKLIGWAGSICLLSNLFVVSTFFIDWKNANNWLLQFTSGS # REDIVCRKDGTLRHSEPTAGENLSCIVIFVLVYYFLTAGMVWFVFLTYAWHWRAMGHVQDRIDKKGSYFHLVAWSLPLVLTITTMAFSEVDGNSIVGI # CFVGYINHSMRAGLLLGPLCGVILIGGYFITRGMVMLFGLKHFANDIKSTSASNKIHLIIMRMGVCALLTLVFILVAIACHVTEFRHADEWAQSFRQF # IIKCGKEVVEEVKMPKHKVIAQTWAKRKDFEDKGRLSITLYNTHTDPVGLNFDVNDLNSSETNDISSTWAAYLPQCVKRRMALTGAATGNSSSHGPRK # NSLDSEISVSVRHVSVESRRNSVDSQVSVKIAEMKTKVASRSRGKHGGSSSNRRTQRRRDYIAAATGKSSRRRESSTSVESQVIALKKTTYPNASHKV # GVFAHHSSKKQHNYTSSMKRRTANAGLDPSILNEFLQKNGDFIFPFLQNQDMSSSSEEDNSRASQKIQDLNVVVKQQEISEDDHDGIKIEELPNSKQV # ALENFLKNIKKSNESNSNRHSRNSARSQSKKSQKRHLKNPAADLDFRKDCVKYRSNDSLSCSSEELDVALDVGSLLNSSFSGISMGKPHSRNSKTSCD # VGIQANPFELVPSYGEDELQQAMRLLNAASRQRTEAANEDFGGTELQGLLGHSHRHQREPTFMSESDKLKMLLLPSK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g38 ### # start gene g39 chr2L AUGUSTUS gene 282172 283147 0.49 - . g39 chr2L AUGUSTUS transcript 282172 283147 0.49 - . g39.t1 chr2L AUGUSTUS stop_codon 282172 282174 . - 0 transcript_id "g39.t1"; gene_id "g39"; chr2L AUGUSTUS CDS 282175 282505 0.62 - 1 transcript_id "g39.t1"; gene_id "g39"; chr2L AUGUSTUS CDS 282582 283147 0.49 - 0 transcript_id "g39.t1"; gene_id "g39"; chr2L AUGUSTUS start_codon 283145 283147 . - 0 transcript_id "g39.t1"; gene_id "g39"; # protein sequence = [MGKSKKQVREFNAAKEAVEATKAQLNTCNDAYTSGAFKYLRFLVHLLAAAQFSYGIYFHYFRVHWPTDLLDEDELKAR # WGGKFKYLTFLDVILQAIYHSLALLNDLFGDNNVSGDSKSMLRSVRDYVFAAFAFPVAHNVCLSFWVIYVWDRELIFPSALDAIFPRQVFMFFRRFNL # RTMHNVSLLESLFWLNHVVHTNVALLAIMDLFTCFRRYPSRLAGITGNVSFILLYIIWLHIVRYFSGEWVYPILEVLPAYLRYVFLALLVGFNLVCYL # LGEFANNVVWGPEFKLLNQQKLKQG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g39 ### # start gene g40 chr2L AUGUSTUS gene 283886 285633 0.98 - . g40 chr2L AUGUSTUS transcript 283886 285633 0.98 - . g40.t1 chr2L AUGUSTUS stop_codon 283886 283888 . - 0 transcript_id "g40.t1"; gene_id "g40"; chr2L AUGUSTUS CDS 283889 284210 1 - 1 transcript_id "g40.t1"; gene_id "g40"; chr2L AUGUSTUS CDS 284748 284968 0.98 - 0 transcript_id "g40.t1"; gene_id "g40"; chr2L AUGUSTUS CDS 285433 285633 0.98 - 0 transcript_id "g40.t1"; gene_id "g40"; chr2L AUGUSTUS start_codon 285631 285633 . - 0 transcript_id "g40.t1"; gene_id "g40"; # protein sequence = [MASVRGNSVYQGVYGALRTLLHLTAVVQFGYGIYYDYNYVQFPTSEPEMRIHHPWGGKFKYLTFLDAIIQALYYIVSL # VNDFVGTNELTPKKPPAVRRFKDWLMATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTNIVVFIILELFISYRSYPKRSQGLAGL # AIFMGAYLVWIHVVKHYSGVWVYPVLEVLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g40 ### # start gene g41 chr2L AUGUSTUS gene 287402 288919 1 - . g41 chr2L AUGUSTUS transcript 287402 288919 1 - . g41.t1 chr2L AUGUSTUS stop_codon 287402 287404 . - 0 transcript_id "g41.t1"; gene_id "g41"; chr2L AUGUSTUS CDS 287405 288919 1 - 0 transcript_id "g41.t1"; gene_id "g41"; chr2L AUGUSTUS start_codon 288917 288919 . - 0 transcript_id "g41.t1"; gene_id "g41"; # protein sequence = [MGLHWQWLIWALVGLHVALATKWYGGGMDFNDPTAWLDDHLPCAQDLVVFPEYYPALLPLPEDISIDGLVFPREGAIL # LAEESTITFGSDKQPSCESDENKAYLKPPKSSKWFDPGTWTDKSKEFSTFTPELERIPCDDEQVIIKGHGPLAFDLENVQYLRLGQLILAGSSISKTY # LEQLISRDLGQFLFYNAEYVQVEYYRGELCGCHKDFERLLEPVCHNVQEQCETPHCLSPVRPLGSCCLICGAILSTPTTHCTEGSRKELVAQISNLIS # QESLKDQIGLHVEFVGSQKFGNCLQAVVTDRHKYSERSLEFLQQNEHNWNKTGTTLKVSGRPYNPNVSFSSIVLILFCMALVGLVSVVILAHFMPENP # YLNRIPQWIHDPRLWRWRHLGLRLRRNLLFNRFDNGGAEGGSSEGGASGVDRLGIMAYDPESGEVRERAFDNPMFEQGGALEEAAKESQEQDEILSVP # KMETGDLDARSVVDEQELTEINLETCEADTDEETI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g41 ### # start gene g42 chr2L AUGUSTUS gene 290410 293002 0.86 + . g42 chr2L AUGUSTUS transcript 290410 293002 0.86 + . g42.t1 chr2L AUGUSTUS start_codon 290410 290412 . + 0 transcript_id "g42.t1"; gene_id "g42"; chr2L AUGUSTUS CDS 290410 290540 0.86 + 0 transcript_id "g42.t1"; gene_id "g42"; chr2L AUGUSTUS CDS 292717 292999 1 + 1 transcript_id "g42.t1"; gene_id "g42"; chr2L AUGUSTUS stop_codon 293000 293002 . + 0 transcript_id "g42.t1"; gene_id "g42"; # protein sequence = [MCIAIREKCSANEEIRRAQLPYLADTPPYSTVVDPAWPIKRACNLRLHDGVLRDVEQQQRRKHENTYTLQQQIDMTKQ # LKAREASSNSSDTPVPPSTHRAQSNLQAEKPAVQNEGEAFRGVPQGGTTNHDGSPPTDIA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 2 # RM: 2 # incompatible hint groups: 0 # end gene g42 ### # start gene g43 chr2L AUGUSTUS gene 293622 294484 0.83 - . g43 chr2L AUGUSTUS transcript 293622 294484 0.83 - . g43.t1 chr2L AUGUSTUS stop_codon 293622 293624 . - 0 transcript_id "g43.t1"; gene_id "g43"; chr2L AUGUSTUS CDS 293625 294372 1 - 1 transcript_id "g43.t1"; gene_id "g43"; chr2L AUGUSTUS CDS 294441 294484 0.83 - 0 transcript_id "g43.t1"; gene_id "g43"; chr2L AUGUSTUS start_codon 294482 294484 . - 0 transcript_id "g43.t1"; gene_id "g43"; # protein sequence = [MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSHLVANVSDEEMQE # HYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHL # KPISRELRRYLYSRRRRARSRSRSPGRRRGSRSRSRSPGRRGGGRGDGVGGGNYLNNERDNMRGNDRGNDRDRRKGGGGGGGGGGGRY] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g43 ### # start gene g44 chr2L AUGUSTUS gene 295272 296815 0.29 + . g44 chr2L AUGUSTUS transcript 295272 296815 0.29 + . g44.t1 chr2L AUGUSTUS start_codon 295272 295274 . + 0 transcript_id "g44.t1"; gene_id "g44"; chr2L AUGUSTUS CDS 295272 295280 1 + 0 transcript_id "g44.t1"; gene_id "g44"; chr2L AUGUSTUS CDS 295346 295628 0.57 + 0 transcript_id "g44.t1"; gene_id "g44"; chr2L AUGUSTUS CDS 295704 296812 0.29 + 2 transcript_id "g44.t1"; gene_id "g44"; chr2L AUGUSTUS stop_codon 296813 296815 . + 0 transcript_id "g44.t1"; gene_id "g44"; # protein sequence = [MDKVNELKEKGNQALSAEKFDEAVAAYTEAIALDDQNHVLYSNRSAAFAKAGKFQEALEDAEKTIQLNPTWPKGYSRK # GAAAAGLNDFMKAFEAYNEGLKYDPTNAILLQGRMETTASALSFMQSQGDIPMDVDPQQARSRRAPSPPPAKPAEPPKPAEPRVEDMTEEQKNKYFAR # KEKELGNAAYKKKDFETALKHYHAAIEHDPTDITFYNNIAAVHFERKEYEECIKQCEKGIEVGRESRADFKLIAKSFARIGNTYRKLENYKQAKVYYE # KAMSEHRTPEIKTSLSEVEAKIKEEERMAYINPEKAEEEKEQGNLFFKKGDYSTAVKHYTEAIKRNPDDPKLYSNRAACYTKLAAFDLGLKDCDTCIK # LDEKFIKGYIRKGKILQGMQQQSKAQAAYQKALELDPNNAEAIEGYRQCSMNFQRNPQEVLKNAMSDPEIQQILKDPAMRMILEQMQSDPNAVKE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g44 ### # start gene g45 chr2L AUGUSTUS gene 299062 302659 1 + . g45 chr2L AUGUSTUS transcript 299062 302659 1 + . g45.t1 chr2L AUGUSTUS start_codon 299062 299064 . + 0 transcript_id "g45.t1"; gene_id "g45"; chr2L AUGUSTUS CDS 299062 299918 1 + 0 transcript_id "g45.t1"; gene_id "g45"; chr2L AUGUSTUS CDS 302026 302656 1 + 1 transcript_id "g45.t1"; gene_id "g45"; chr2L AUGUSTUS stop_codon 302657 302659 . + 0 transcript_id "g45.t1"; gene_id "g45"; # protein sequence = [MRPQAPGSLVDPNEDELRMAPWYWGRISREEAKSILHGKPDGSFLVRDALSMKGEYTLTLMKDGCEKLIKICHMDRKY # GFIETDLFNSVVEMINYYKENSLSMYNKTLDITLSNPIVRAREDEESQPHGDLCLLSNEFIRTCQLLQNLEQNLENKRNSFNAIREELQEKKLHQSVF # GNTEKIFRNQIKLNESFMKAPADAPSTEAGGAGDGANAAASAAANANARRSLQEHKQTLLNLLDALQAKGQVLNHYMENKKKEELLLERQINALKPEL # QILQLRKDKYIERLKGFNLKDDDLKMILQMGFDKWQQLYETVSNQPHSNEALWLLKDAKRRNAEEMLKGAPSGTFLIRARDAGHYALSIACKNIVQHC # LIYETSTGFGFAAPYNIYATLKSLVEHYANNSLEEHNDTLTTTLRWPVLYWKNNPLQVQMIQLQEEMDLEYEQAATLRPPPMMGSSAPIPTSRSREHD # VVDGTGSLEAEAAPASISPSNFSTSQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g45 ### # start gene g46 chr2L AUGUSTUS gene 318418 319233 0.9 - . g46 chr2L AUGUSTUS transcript 318418 319233 0.9 - . g46.t1 chr2L AUGUSTUS stop_codon 318418 318420 . - 0 transcript_id "g46.t1"; gene_id "g46"; chr2L AUGUSTUS CDS 318421 319233 0.9 - 0 transcript_id "g46.t1"; gene_id "g46"; chr2L AUGUSTUS start_codon 319231 319233 . - 0 transcript_id "g46.t1"; gene_id "g46"; # protein sequence = [MKQFAVIFALALASVSAISVPQPGFPEGRIINGYEAAKGEAPYIVSLQTTSNSHFCAGSLLDEVTIVTAAHCLTYNQG # QAVAGAHSRTDQENVQIRKFTNAQYVIHENYGGGVGPNDIGLILLKEEDAFDLNAVARDGSNPVSAVSLPSKTFQGTSDGYLYGWGRDNSGLLPLNLQ # KLDAIIVDYNECKAALPSNNSLAETNVCTHTPGKADGSCNGDSGGPLVSQSSSRGAELIGIVSWGYTPCLSTTYPSVYTSVSSFLPWIDENRKAK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g46 ### # start gene g47 chr2L AUGUSTUS gene 320388 321221 0.95 - . g47 chr2L AUGUSTUS transcript 320388 321221 0.95 - . g47.t1 chr2L AUGUSTUS stop_codon 320388 320390 . - 0 transcript_id "g47.t1"; gene_id "g47"; chr2L AUGUSTUS CDS 320391 321221 0.95 - 0 transcript_id "g47.t1"; gene_id "g47"; chr2L AUGUSTUS start_codon 321219 321221 . - 0 transcript_id "g47.t1"; gene_id "g47"; # protein sequence = [MKLITVTLVIALVAAAQGAKLSDKLAKLVPSFATGFVINGTEAEPHSAPYIVSLATNYLKHSHICGGTLINKDWIVTA # AHCISEPVGMSIIAGLHTRAEVDELTQQRQVDFGRVHEKYTGGVGPYDIALLHVNESFIFNEWVQPATLPSREQVHEGETHLYGWGQPKSYIFSGAKT # LQTVTTQILNYEECKEELPESAPIAESNICSSSLQQSKSACNGDSGGPLVVEFTNAPSELIGIVSWGYIPCGLANMPSIYTKVSAYIDWITNIQSAYY # KLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g47 ### # start gene g48 chr2L AUGUSTUS gene 322131 322985 0.95 + . g48 chr2L AUGUSTUS transcript 322131 322985 0.95 + . g48.t1 chr2L AUGUSTUS start_codon 322131 322133 . + 0 transcript_id "g48.t1"; gene_id "g48"; chr2L AUGUSTUS CDS 322131 322982 0.95 + 0 transcript_id "g48.t1"; gene_id "g48"; chr2L AUGUSTUS stop_codon 322983 322985 . + 0 transcript_id "g48.t1"; gene_id "g48"; # protein sequence = [MLSPLFLLPLLALAGAAKLPHIQHLTLRDTEQVHAEIQPLIIDGYDVQGVDNVPYLVSLSLTRATYTHLCGASIIGKR # WLLTAAHCVDELRTFNGDAVGTPVYAGIINRSNVTAAQVRYVDFASTHRSFNGNAGSDNIALLHVSESFEYNARVQQIALPDINDDYSNKTAAAYGWG # LTDPDGDEYSKELQYAFAPLLNSTGCKELLPADAPLTAQQVCSQVKTCYGDGGTPLIYWPITGPAELVGLGSWSYMPCGYANRPTVYTSVPPYIGWIH # QTIGAYYQLN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g48 ### # start gene g49 chr2L AUGUSTUS gene 323245 326832 0.47 + . g49 chr2L AUGUSTUS transcript 323245 326832 0.47 + . g49.t1 chr2L AUGUSTUS start_codon 323245 323247 . + 0 transcript_id "g49.t1"; gene_id "g49"; chr2L AUGUSTUS CDS 323245 323343 0.86 + 0 transcript_id "g49.t1"; gene_id "g49"; chr2L AUGUSTUS CDS 325678 325824 0.84 + 0 transcript_id "g49.t1"; gene_id "g49"; chr2L AUGUSTUS CDS 326803 326829 0.52 + 0 transcript_id "g49.t1"; gene_id "g49"; chr2L AUGUSTUS stop_codon 326830 326832 . + 0 transcript_id "g49.t1"; gene_id "g49"; # protein sequence = [MGKFGKIIVTANLVTDPDESETHSYHDSAVVCQDSGTGTPVTMRVDAKGFFLYWVDQNNELDILDIATIRDVRTGQYA # KRPKGNAHRSRPR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 0 # end gene g49 ### # start gene g50 chr2L AUGUSTUS gene 327574 329625 0.79 - . g50 chr2L AUGUSTUS transcript 327574 329625 0.79 - . g50.t1 chr2L AUGUSTUS stop_codon 327574 327576 . - 0 transcript_id "g50.t1"; gene_id "g50"; chr2L AUGUSTUS CDS 327577 329625 0.79 - 0 transcript_id "g50.t1"; gene_id "g50"; chr2L AUGUSTUS start_codon 329623 329625 . - 0 transcript_id "g50.t1"; gene_id "g50"; # protein sequence = [MMGTRAAEPRGSRRSLAGQSIQELSVCQEPDPLNTFLEKPLTLYQWMRWRNCKTHKPHLEETYPSILPPISKCDDAKT # LKYVENAMEANKCKEYVKEDVLTVWNYSPQKESLVWYGVKSQYPSPQAVLYDRALKKSLKAASLAPKPPKKSNIKPKWQLQKKPPQPGAFVLNRKCLK # AKLERMPNIKRQLKSNNVFSWLHCPQPADPSNPFDDSAVYPAISIEQAMDMAKPEKPPKHGLRRKHWYCPPKCGEAESKCTDYEWAKYKMDPRPDNEA # FQREMANQKAFKQPEPRNYDELYKSLVTCFVQDPNGKNDLCEALEKCCRDPKDPPAQGCSEFVPDGAGGDGESAVDKDKGRDKDVDIDIHVDIDKDVD # IDKDKRKDKGKTGDGDNENEGIGDGDGEKGGQNDKGKHEKGDGEGNKGSEKDGGEKKPAKQNEVKENDKEKGMEKGKEKGKEKGKEKKTKEPNFRSSE # DRPPVPQSKDTTHGTEESHHGDGDFGGPDGDREKGKNQPDGKSGIVDQNQGKDKDKGKGKEKGMNKKGKGKKKPKDKDEDKNTKDNRSEKDCPCEICC # PPKEEDTPLIKEMRRRDRERQVRDYLRQMRHRQYMECKDLKYPSPHHKCDPIQCNNQFCSNPRMQTHFARVQAVRSLQQILQRRNRQGDVKISKDLDS # LLARLCNSLTISDGHCR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 4 # RM: 4 # end gene g50 ### # start gene g51 chr2L AUGUSTUS gene 329991 332132 1 - . g51 chr2L AUGUSTUS transcript 329991 332132 1 - . g51.t1 chr2L AUGUSTUS stop_codon 329991 329993 . - 0 transcript_id "g51.t1"; gene_id "g51"; chr2L AUGUSTUS CDS 329994 332132 1 - 0 transcript_id "g51.t1"; gene_id "g51"; chr2L AUGUSTUS start_codon 332130 332132 . - 0 transcript_id "g51.t1"; gene_id "g51"; # protein sequence = [MSNKQSIDSRRGSHNKRTIRTSDIGTLDTDIIHTPYELMRQRNCKAEKIIKWERYPSIRPPVSKCSNDQTRNYLSESV # DQGGCLDPSTKGQDAVRIWKLSPHKSTLKFYGVADGLKLPEAVKFDRTLTTSLKHANGSRRPVPKPPVPLEPKRPPQPVSLCQPYILNRQTLKEELQR # MPIALQKLNPKEAFNTLFCEKREDPMDPLGVEAATNQIVSLREALDMAKPETPSKHGLRRKHWYCPSKCGEPENKCTVFEWAQYKLNPPPYDKAFFKW # FQEQKVQLEREPHDYDELYKRFQACFEEKGQPDPECVAMAKCCPDMIKETKDEYGVGEGGTGGGGGTHNTKEGDGQTGSGVSGPEGVSQSGKDKEKGR # VKKSDDLGDTEKDKETDKSKSTGKDNEKNKEDKEKEKDKGKDKVKDNEKEKDKGKDKVKDKDKDADTDKGKSTDEDKGKHNAKDKDKSKEKDKNNDTN # QNNKKKNIADPDHEQLKPKHPGKQPKPPIENTTDTSTHNISSFISRDSDKISIQEDIIKEKGDPSAKDGVEDKPTQPSSTKPHNKKPASKKPPKGKTG # EEKPQKVDEKEVKESCPPCPPVGCACTICDCLYGTKIPISPKMQSIMAEEKLREKREYLRRMRHRAYMDCTSEKPLVPQHKVDPISCDNCFCLDPKIS # EYCECLRALQHLQRLLGKERHRIVNNELIFNLDDLRQRIANRMCKCF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g51 ### # start gene g52 chr2L AUGUSTUS gene 332873 343737 0.27 + . g52 chr2L AUGUSTUS transcript 332873 343737 0.27 + . g52.t1 chr2L AUGUSTUS start_codon 332873 332875 . + 0 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 332873 332911 0.62 + 0 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 334120 334257 0.89 + 0 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 335415 335548 0.67 + 0 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 336018 336203 0.44 + 1 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 336349 336546 1 + 1 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 337016 337198 1 + 1 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 337938 338118 1 + 1 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 339207 339441 0.88 + 0 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 340710 340855 0.88 + 2 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 342579 342792 1 + 0 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS CDS 342866 343734 1 + 2 transcript_id "g52.t1"; gene_id "g52"; chr2L AUGUSTUS stop_codon 343735 343737 . + 0 transcript_id "g52.t1"; gene_id "g52"; # protein sequence = [MTLADKRNLQPGGDNKLRQIVTLGPQDTLEEKTVTVCHGSDFVNMTFVNFCCTRRDIAQLWTDGLIKLAYSLAQLNGS # AIMFLQKAHTKLCLQVDKSGRIPVKNIIKLFAQNKEDRKRVEKALDVTGLPSGKVDSISVSKFQFEDFYNLYKYLTQRSEVERLFDSIVGNSKRKCMS # IAQLVEFLNKTQRDPRLNEILYPYANPARAKELIQQYEPNKFNAQKGQLSLDGFLRYLMGDDNPIMAPSKLDLCDDMDQPMSHYFINSSHNTYLTGHQ # LTGKSSVEIYRQCLLAGCRCVELDFWNGRTEEPVIVHGYTFVPEIFAKDVLEAIAESAFKTSEYPVILSFENHCNPRQQAKIANYCREIFGDMLLDKP # LDSHPLEPNMDLPPPAMLRRKIIIKNKKKHHHHHHHHHHKKPAQVGTPAANNKLTTANSVDAKAAQQVGLSASHEDGGVTRSTANGDVATGTGTGSAA # GTAGHAPPLQQIRQSSKDSTGSSDSDSSSEDESLPNTTPNLPSGNEPPPEKAQKETEAGAEISALVNYVQPIHFSSFENAEKKNRCYEMSSFDEKQAT # TLLKERPIEFVNYNKHQLSRVYPAGTRFDSSNFMPQLFWNAGCQLVALNFQTLDLAMQLNLGIFEYNARSGYLLKPEFMRRSDRRLDPFAESTVDGII # AGTVSITVLSGQFLTDKRANTFVEVDMYGLPADTVRKKFRTKTVRDNGMNPLYDEEPFVFKKVVLPELASIRIAAYEEGGKLIGHRVLPVIGLCPGYR # HVNLRSEVGQPIALASLFLCVVVKDYVPDDLSNFAEALANPIKYQSELEKRDIQLSVLTDEAEALGSADEDLSKSCE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/11 # CDS introns: 0/10 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 10 # RM: 10 # incompatible hint groups: 1 # RM: 1 # end gene g52 ### # start gene g53 chr2L AUGUSTUS gene 344125 345448 0.79 + . g53 chr2L AUGUSTUS transcript 344125 345448 0.79 + . g53.t1 chr2L AUGUSTUS start_codon 344125 344127 . + 0 transcript_id "g53.t1"; gene_id "g53"; chr2L AUGUSTUS CDS 344125 344489 1 + 0 transcript_id "g53.t1"; gene_id "g53"; chr2L AUGUSTUS CDS 344576 344947 0.91 + 1 transcript_id "g53.t1"; gene_id "g53"; chr2L AUGUSTUS CDS 345009 345153 0.91 + 1 transcript_id "g53.t1"; gene_id "g53"; chr2L AUGUSTUS CDS 345215 345445 0.88 + 0 transcript_id "g53.t1"; gene_id "g53"; chr2L AUGUSTUS stop_codon 345446 345448 . + 0 transcript_id "g53.t1"; gene_id "g53"; # protein sequence = [MSVDVTVDRTDGGRGEDSISIVAPSIQHQHSLDQSVSTSIRQVESSQFDVDLVLAEPLEKILDHKSVKEKRLEMEKKL # ESLRKKHDKEKIKIAGQKSSPLEGKKPKFAITNKLVKRLSNKSLEPGVEIPACPLDLGDSSEESAAADAGEDLAGGSSSLDGRTQESRLRSACREYTS # QYRELQEKYHEAIYSAAEKVLKTSQTGQTKQLKASLDKVTGEVMHQLQEARRNEVKNLATVHRDRDELIRMKREVASSVVERGVAERVRLKQTFDRRT # DELQKQHDSVRNALAEHRSKARQILDKEAESRSCVSSNGFLVLFHGPHHHGCTGSGSSALSGNNLTLNLDAGAAGSHSAISPAKSHNSIAAAAEMKT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g53 ### # start gene g54 chr2L AUGUSTUS gene 353644 357686 0.45 - . g54 chr2L AUGUSTUS transcript 353644 357686 0.45 - . g54.t1 chr2L AUGUSTUS stop_codon 353644 353646 . - 0 transcript_id "g54.t1"; gene_id "g54"; chr2L AUGUSTUS CDS 353647 353663 0.68 - 2 transcript_id "g54.t1"; gene_id "g54"; chr2L AUGUSTUS CDS 356367 356837 0.67 - 2 transcript_id "g54.t1"; gene_id "g54"; chr2L AUGUSTUS CDS 356891 357191 0.83 - 0 transcript_id "g54.t1"; gene_id "g54"; chr2L AUGUSTUS CDS 357423 357686 0.96 - 0 transcript_id "g54.t1"; gene_id "g54"; chr2L AUGUSTUS start_codon 357684 357686 . - 0 transcript_id "g54.t1"; gene_id "g54"; # protein sequence = [MPGTSDTRRLVDALDEDDEILGTEGSFVPAFRPQDHHADEQCLMERQQDEVVLVSNEPESGRLFTYLVFYLLGIGTMT # PWNFFVTAEDYWKYKFRNASINNTDLEEELTPLQKSFTCDLALTATISGTTFLLLNAIFGHHVSLRTKMLGTLWMILILFGVTTGFVEINTDTWQEQF # FLITLIIVVLLNISAATMSGALYGVAGLFPSEFITAVVSGQALGGILTALAFILVLAFDTGPNTTAFIFFIVGGVLILLCIVCYVILARKPFFRYYLE # GGDKYKVIRAVPSHNRNGSAEGLPLEPILRQVMSKIYLHAISLALLYTTTLSVYPAVTVLMQSEYGHSVWTVILSAF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g54 ### # start gene g55 chr2L AUGUSTUS gene 368416 376932 0.22 - . g55 chr2L AUGUSTUS transcript 368416 376932 0.22 - . g55.t1 chr2L AUGUSTUS stop_codon 368416 368418 . - 0 transcript_id "g55.t1"; gene_id "g55"; chr2L AUGUSTUS CDS 368419 368462 0.23 - 2 transcript_id "g55.t1"; gene_id "g55"; chr2L AUGUSTUS CDS 376662 376932 0.55 - 0 transcript_id "g55.t1"; gene_id "g55"; chr2L AUGUSTUS start_codon 376930 376932 . - 0 transcript_id "g55.t1"; gene_id "g55"; # protein sequence = [MRRSPSSIADRNRDWSRSWIESAALLPISRFIYGRNANKRPATIDRRRTRSDHLSDEFNGQQTRTGIGNIWYRARYLS # SPCGRVNQPVAQADSDKIPFVFDIARH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 5 # RM: 5 # incompatible hint groups: 0 # end gene g55 ### # start gene g56 chr2L AUGUSTUS gene 383530 383832 0.35 + . g56 chr2L AUGUSTUS transcript 383530 383832 0.35 + . g56.t1 chr2L AUGUSTUS start_codon 383530 383532 . + 0 transcript_id "g56.t1"; gene_id "g56"; chr2L AUGUSTUS CDS 383530 383829 0.35 + 0 transcript_id "g56.t1"; gene_id "g56"; chr2L AUGUSTUS stop_codon 383830 383832 . + 0 transcript_id "g56.t1"; gene_id "g56"; # protein sequence = [MMKMKLPPNLIKIPNDLHMKSAVAGKRNKPNSAPDERRVDGRDQLADSPMRWSSSICIEASSSAAATGQRKPQPEDES # ENEVEAMTTRHASKPQKTPSTD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g56 ### # start gene g57 chr2L AUGUSTUS gene 384551 387270 0.68 + . g57 chr2L AUGUSTUS transcript 384551 387270 0.68 + . g57.t1 chr2L AUGUSTUS start_codon 384551 384553 . + 0 transcript_id "g57.t1"; gene_id "g57"; chr2L AUGUSTUS CDS 384551 384894 0.68 + 0 transcript_id "g57.t1"; gene_id "g57"; chr2L AUGUSTUS CDS 385701 385746 1 + 1 transcript_id "g57.t1"; gene_id "g57"; chr2L AUGUSTUS CDS 386308 386576 1 + 0 transcript_id "g57.t1"; gene_id "g57"; chr2L AUGUSTUS CDS 386703 387267 1 + 1 transcript_id "g57.t1"; gene_id "g57"; chr2L AUGUSTUS stop_codon 387268 387270 . + 0 transcript_id "g57.t1"; gene_id "g57"; # protein sequence = [MGISEEIKLEELPQEAKLAHPDAVVLVDRAPGSSAASAGAALTVSMSVSGGAPSGASGASGGTNSPVSDGNSDCEADE # YAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAATMQTVVGAALPPNP # FTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNH # MLASPPTSPASGHASQHQQHPTAHPPPPQAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPPPSHQAPPPPPRAATPP # EDRRTSSIAALRLKAREHELKLELLRQNGHGNDVVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g57 ### # start gene g58 chr2L AUGUSTUS gene 396734 400894 0.26 - . g58 chr2L AUGUSTUS transcript 396734 400894 0.26 - . g58.t1 chr2L AUGUSTUS stop_codon 396734 396736 . - 0 transcript_id "g58.t1"; gene_id "g58"; chr2L AUGUSTUS CDS 396737 398866 0.96 - 0 transcript_id "g58.t1"; gene_id "g58"; chr2L AUGUSTUS CDS 399848 400456 0.98 - 0 transcript_id "g58.t1"; gene_id "g58"; chr2L AUGUSTUS CDS 400523 400667 0.69 - 1 transcript_id "g58.t1"; gene_id "g58"; chr2L AUGUSTUS CDS 400725 400894 0.36 - 0 transcript_id "g58.t1"; gene_id "g58"; chr2L AUGUSTUS start_codon 400892 400894 . - 0 transcript_id "g58.t1"; gene_id "g58"; # protein sequence = [MKIMSNNLRQEYERQLVNIRQLRQLYEERQRVAAAEYENLQRLISIKRDELTAEQDKNKSLEDRNHSLLKEVEMANEE # LAKLREECGEHKFEKRLLSEQVGAVNMLFSQLIMGFNGKSSMNIDRVNRMLEENRHLLNQMTQAEGNCSDGATLPKLLFDLVEQATGHGDSAEESDKS # RSATPTPKATPTKEDTTDGCQPGGEVEKCRKGSSRSGSGVDATAASLKSHEPEIMGKVASAQEIIGNLPKVWKVLMELLSHHKIERVQLEELPSSSAA # FPSSSASNASGKDEGESHRKPPELSVSKTYIKLKDLILEKKSLVKETTRLKTLNSHLDYRLNQQEKRLSGVSLELTKTWHLVGKMQRQHRQLHTQEQI # LRYQLQQKRRLLSELKDELEYCRRKWALARAKNDESQEQCDEWRREFARRKLEDANHSAESGYSDSGPQSDEERDLGTVDPVEAPTSSSTCRRKLLRD # QFEHTRKIKRMQSTSPGRQGFEGEEAEADNIVLRWNSAPPTCGWREEAEEGEDVDELEEEGAHGLLPKSLHSSRSRQRSVEGSSETAGTASRIQKLEE # QCKNLIQQVLETSGNRERLEIQLCQFQDDIAPAQHAVPLEEFINRKRMERMTRASSAPATGSLTPREEEYTRKRSERLGRLEEESRQLMSRIRRTADR # GHYLKKSLDRIRRAPSREASFESNTEEEAIPASKSESCPATSPLTAEEEEYTSRRAARIQRMERESRQLISQLTRNSERGENFATKLDTLHEQYGPNP # QLDQDRSSTSMSQTLEQRLEDIERVSATRAERLRILELQGNELIARLSSTSERGTAMINRIAEREATRRQEAELVEQTVSSEEATSSEASTRIVRHPE # EEAEGADCFVTVTTTASQVALKLQSTGAIPKTTTRHVMPQTKLCAATRQDDAAKKRSSGREAIQKEAPETLEDMVQRLRALPFPEKTQENESEQSETE # TSNQNTYSFTEYTNQEDILDLEDNPHNKVEDENTEGQESGQPTTSNQLDEQKHMNTEH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g58 ### # start gene g59 chr2L AUGUSTUS gene 400998 401663 0.33 - . g59 chr2L AUGUSTUS transcript 400998 401663 0.33 - . g59.t1 chr2L AUGUSTUS stop_codon 400998 401000 . - 0 transcript_id "g59.t1"; gene_id "g59"; chr2L AUGUSTUS CDS 401001 401663 0.33 - 0 transcript_id "g59.t1"; gene_id "g59"; chr2L AUGUSTUS start_codon 401661 401663 . - 0 transcript_id "g59.t1"; gene_id "g59"; # protein sequence = [MGNAESTQSADDTQMQMQQSTDDEPWWNNIEHEDLILEQAPRATTQKEAEEVLPENRVKYRENKVAIEMEDKGNETHQ # REQTLEEFREELRQKKEVRQNAVQGLRDEIASLKEQLAIEKSENQRLRKVTATDGQADNQHDHSNSPSKPDADPDDENPSSRSRHANIELANAQLALQ # QAQAENLSLRGEVEVVQRQVGTLKEVISCCKQMLSVKEEQCAQVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g59 ### # start gene g60 chr2L AUGUSTUS gene 404581 407894 0.91 + . g60 chr2L AUGUSTUS transcript 404581 407894 0.91 + . g60.t1 chr2L AUGUSTUS start_codon 404581 404583 . + 0 transcript_id "g60.t1"; gene_id "g60"; chr2L AUGUSTUS CDS 404581 406035 0.91 + 0 transcript_id "g60.t1"; gene_id "g60"; chr2L AUGUSTUS CDS 406095 407891 0.97 + 0 transcript_id "g60.t1"; gene_id "g60"; chr2L AUGUSTUS stop_codon 407892 407894 . + 0 transcript_id "g60.t1"; gene_id "g60"; # protein sequence = [MLTVGLDNSAKHMIPNHWLSPAGEKISMKVESIWIAKPKVPQDVIDVRTREIYPTDSRQLHVSYSGMCSVRLGWSVNG # VQKTPINMDLGEVPIMLRSKACNLGQATPEEMVKHGEHDSEWGGIFVIRGNEKIVRMLIMTRRNHPICVKRSSWKDRGQNFSDLGMLVQTVREDESSL # SNVVHYLNNGTAKFMFSHVKRLSYVPVCLILKCLMDYTDEEIYNRLVQGYESDQYYVSCVQAMLREVQNENVYTHAQCKSFIGNLFRARFPEVPEWQP # DDDVTDFILRERVMIHLDTYEDKFQLIVFMIQKLFQCAQGKYKVENVDSAMMQEVLLPGHLYQKYLSERVESWVSQVRRCLQKKLTSPDALVTSAVMT # QCMRQAGGVGRAIESFLATGNIASRTGLGLMQNSGLVIMAENINRMRYMSHFRAIHRGSYFTTMRTTEARQLLPDAWGFICPVHTPDGTPCGLLNHLT # LTCEISMRPDPKLVKAIPKHLIDMGMMPLSNRRYLGEKLYVVFLDGKHLGHIHQSEAEKIVDELRYGKIFGTLPQMMEIGFIPFKKNGQFPGLYIATG # PARMMRPVWNLKWKRVEYIGTLEQLYMEIAIDAKEMYPDFTTHLELAKTHFMSNLANLIPMPDYNQSPRNMYQCQMGKQTMGTPCLNWPKQAANKLYR # LQTPGTPLFRPVHYDNIQLDDFAMGTNAIVAVISYTGYDMEDAMIINKAAYERGFAYGSIYKTKFLTLDKKSSYFARHPHMPELIKHLDTDGLPHPGS # KLSYGSPLYCYFDGEVATYKVVKMDEKEDCIVESIRQLGSFDLSPKKMVAITLRVPRPATIGDKFASRAGQKGICSQKYPAEDLPFTESGLIPDIVFN # PHGFPSRMTIAMMIETMAGKGAAIHGNVYDATPFRFSEENTAIDYFGKMLEAGGYNYYGTERLYSGVDGREMTADIFFGVVHYQRLRHMVFDKWQVRS # TGAVEARTHQPIKGRKRGGGVRFGEMERDALISHGAAFLLQDRLFHNSDKTHTLVCHKCGSILAPLQRIVKRNETGGLSSQPDTCRLCGDNSSVSMIE # IPFSFKYLVTELSSVNINARFKLNEI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g60 ### # start gene g61 chr2L AUGUSTUS gene 409388 413459 0.31 - . g61 chr2L AUGUSTUS transcript 409388 413459 0.31 - . g61.t1 chr2L AUGUSTUS stop_codon 409388 409390 . - 0 transcript_id "g61.t1"; gene_id "g61"; chr2L AUGUSTUS CDS 409391 409465 0.97 - 0 transcript_id "g61.t1"; gene_id "g61"; chr2L AUGUSTUS CDS 409532 409736 0.83 - 1 transcript_id "g61.t1"; gene_id "g61"; chr2L AUGUSTUS CDS 409790 410073 0.81 - 0 transcript_id "g61.t1"; gene_id "g61"; chr2L AUGUSTUS CDS 410127 411060 0.94 - 1 transcript_id "g61.t1"; gene_id "g61"; chr2L AUGUSTUS CDS 411129 411718 1 - 0 transcript_id "g61.t1"; gene_id "g61"; chr2L AUGUSTUS CDS 411782 412237 1 - 0 transcript_id "g61.t1"; gene_id "g61"; chr2L AUGUSTUS CDS 412447 412658 0.72 - 2 transcript_id "g61.t1"; gene_id "g61"; chr2L AUGUSTUS CDS 413396 413459 0.46 - 0 transcript_id "g61.t1"; gene_id "g61"; chr2L AUGUSTUS start_codon 413457 413459 . - 0 transcript_id "g61.t1"; gene_id "g61"; # protein sequence = [MAPVRGDGMRGLAVFISDIRNCKSKEAEVKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEA # VNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVHVNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFR # SSPDIIPGGEWTSRIIHLLNDQHMGVVTAATSLIDALVKRNPDEYKGCVNLAVSRLSRIVTASYTDLQDYTYYFVPAPWLSVKLLRLLQNYNPVTEEA # GVRARLNETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATSEFSHEEVKKHQEV # VILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVI # NREEVQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHSKYHLCSPMTRALLLSTYIKFINLFPEIRTNIQDVFRQHSN # LRSADAELQQRASEYLQLSIVASTDVLATVLEEMPSFPERESSILAVLKKKKPGRVPENEIRESKSPAPLTSAAQNNALVNNSHSKLNNSNANTDLLG # LSTPPSNNIGSGSNSNSTLIDVLGDMYGSNSNNNSSAVYNTKKFLFKNNGVLFENEMLQIGVKSEFRQNLGRLGLFYGNKTQVPLTNFNPVLQWSAED # ALKLNVQMKVVEPTLEAGAQIQQLLTAECIEDYADAPTIEISFRYNGTQQKFSIKLPLSVNKFFEPTEMNAESFFARWKNLSGEQQRSQKVFKAAQPL # DLPGARNKLMGFGMQLLDQVDPNPDNMVCAGIIHTQSQQVGCLMRLEPNKQAQMFRLTVRASKETVTREICDLLTDQF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/8 # CDS introns: 0/7 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g61 ### # start gene g62 chr2L AUGUSTUS gene 415389 417634 0.99 + . g62 chr2L AUGUSTUS transcript 415389 417634 0.99 + . g62.t1 chr2L AUGUSTUS start_codon 415389 415391 . + 0 transcript_id "g62.t1"; gene_id "g62"; chr2L AUGUSTUS CDS 415389 415446 0.99 + 0 transcript_id "g62.t1"; gene_id "g62"; chr2L AUGUSTUS CDS 415512 416710 0.99 + 2 transcript_id "g62.t1"; gene_id "g62"; chr2L AUGUSTUS CDS 416789 417631 1 + 0 transcript_id "g62.t1"; gene_id "g62"; chr2L AUGUSTUS stop_codon 417632 417634 . + 0 transcript_id "g62.t1"; gene_id "g62"; # protein sequence = [MSFSSDEVNFLVYRYLQESGFLHSAYVFGIESHISQSNINGALVPPAALLTILQKGLLYTEVEWSVGEDGEVARPIEG # LSLIDAVMPEVKPLKPIVKTEPGKPGAVDSSAPAGGNQNNNAKPEIKIEPGTGVAGSAGGNKIAGSTTGTSTPTDQSASEVDSSGNAANNAGGTYAGN # NGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGNAGNANATSTDDAASSTSTNGNSSTSSSVEQPTSGLTPAGGTVSTSNPDAAA # SGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTSGGAGTPAALVPMDIDENIEIPESKARVLRGHESEVFICAWNPSRDLLAS # GSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKWNKCGNYILSAG # VDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRC # CHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYK # GTGGIFEVCWNSKGTKVGASASDGSVFVLDLRKF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g62 ### # start gene g63 chr2L AUGUSTUS gene 418557 419600 1 - . g63 chr2L AUGUSTUS transcript 418557 419600 1 - . g63.t1 chr2L AUGUSTUS stop_codon 418557 418559 . - 0 transcript_id "g63.t1"; gene_id "g63"; chr2L AUGUSTUS CDS 418560 419600 1 - 0 transcript_id "g63.t1"; gene_id "g63"; chr2L AUGUSTUS start_codon 419598 419600 . - 0 transcript_id "g63.t1"; gene_id "g63"; # protein sequence = [MSDQEDVVVKKEKKCIENIDENDEEPDDVDFKDSGKISSLKALGPFIAGKENSRNTVYLSDVPDICKDKPCMLGVDEA # GRGPVLGPMVYGISYCPLESNKALEDLGCADSKQLTEGKRDIIFNDINTKEYATSCVGWAVEIISPNTISTSMYRRSKCSLNEVSMDSAMGLIQQAID # AGVNIAEVYVDTVGPPEKYQEKLLKRFPSFKITVAKKADSTYPIVSAASICAKVTRDHALKVWSFPEGLVIKDNEFGSGYPGDPVTRRFLTEYIDLVF # GFPRLVRFSWSTAENALADKAYDMEFDEPDSEKPKYAGTKLTKFFKGTTKSGEIIREECRFFKQRHLESVMEF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g63 ### # start gene g64 chr2L AUGUSTUS gene 420075 420558 1 + . g64 chr2L AUGUSTUS transcript 420075 420558 1 + . g64.t1 chr2L AUGUSTUS start_codon 420075 420077 . + 0 transcript_id "g64.t1"; gene_id "g64"; chr2L AUGUSTUS CDS 420075 420146 1 + 0 transcript_id "g64.t1"; gene_id "g64"; chr2L AUGUSTUS CDS 420292 420555 1 + 0 transcript_id "g64.t1"; gene_id "g64"; chr2L AUGUSTUS stop_codon 420556 420558 . + 0 transcript_id "g64.t1"; gene_id "g64"; # protein sequence = [MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPA # AAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 2 # RM: 2 # end gene g64 ### # start gene g65 chr2L AUGUSTUS gene 420941 421366 1 - . g65 chr2L AUGUSTUS transcript 420941 421366 1 - . g65.t1 chr2L AUGUSTUS stop_codon 420941 420943 . - 0 transcript_id "g65.t1"; gene_id "g65"; chr2L AUGUSTUS CDS 420944 421366 1 - 0 transcript_id "g65.t1"; gene_id "g65"; chr2L AUGUSTUS start_codon 421364 421366 . - 0 transcript_id "g65.t1"; gene_id "g65"; # protein sequence = [MNHTANKPRQIGFDRQFSADVNGVPTEIVFHCFAKKWFLVITQLGKIPGIYNVHFDVKKDERVVPYLHGPVDNPEFHV # SVPITMNCCLGLDTDETRSAIQFLVNRTGLHKCPTEFVVGLGLKKIDGPNLRALAKVLEETLF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g65 ### # start gene g66 chr2L AUGUSTUS gene 421800 422435 0.63 + . g66 chr2L AUGUSTUS transcript 421800 422435 0.63 + . g66.t1 chr2L AUGUSTUS start_codon 421800 421802 . + 0 transcript_id "g66.t1"; gene_id "g66"; chr2L AUGUSTUS CDS 421800 422188 0.63 + 0 transcript_id "g66.t1"; gene_id "g66"; chr2L AUGUSTUS CDS 422243 422432 1 + 1 transcript_id "g66.t1"; gene_id "g66"; chr2L AUGUSTUS stop_codon 422433 422435 . + 0 transcript_id "g66.t1"; gene_id "g66"; # protein sequence = [MSTCICLGPKRAGKTHLLKALQDPESIDETTFSMPTIGTGIYRIHFPTKSPNGDKNKPPPSEAPANIPHGGKNLPKSI # QILEIGGSMAPLWRQYFEDVKKLIYVVDTSNLCQISAAGVLFYSILTEPRLQHNTKILLVLAKMDYSYRQMRNEALLMLQMQKLQKQIRQQVTIVEAS # AVTKVGLDPIYDWLQRP] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g66 ### # start gene g67 chr2L AUGUSTUS gene 423452 447249 0.19 + . g67 chr2L AUGUSTUS transcript 423452 447249 0.19 + . g67.t1 chr2L AUGUSTUS start_codon 423452 423454 . + 0 transcript_id "g67.t1"; gene_id "g67"; chr2L AUGUSTUS CDS 423452 423845 1 + 0 transcript_id "g67.t1"; gene_id "g67"; chr2L AUGUSTUS CDS 423916 424763 0.89 + 2 transcript_id "g67.t1"; gene_id "g67"; chr2L AUGUSTUS CDS 425073 425246 0.75 + 0 transcript_id "g67.t1"; gene_id "g67"; chr2L AUGUSTUS CDS 435365 435435 0.22 + 0 transcript_id "g67.t1"; gene_id "g67"; chr2L AUGUSTUS CDS 438582 438727 0.87 + 1 transcript_id "g67.t1"; gene_id "g67"; chr2L AUGUSTUS CDS 443082 443161 1 + 2 transcript_id "g67.t1"; gene_id "g67"; chr2L AUGUSTUS CDS 443226 446583 0.95 + 0 transcript_id "g67.t1"; gene_id "g67"; chr2L AUGUSTUS CDS 446642 447246 0.95 + 2 transcript_id "g67.t1"; gene_id "g67"; chr2L AUGUSTUS stop_codon 447247 447249 . + 0 transcript_id "g67.t1"; gene_id "g67"; # protein sequence = [MASAMLATLELDYFRAVSLYRRRSYERCAELCNALLQAGHDGHVQLFTTKEEEEEEQHQQQQAEHSRFGSNLQRIGPR # PRGAAGGGAGAVDSGPSIMMPTWLMEGVWQLKMRALTQRVYVDDLDEDDGGNEATEEVEFERIATAARPGSSIKTAFQPRPLTSQRAQQARSRGAGVA # HSSDGRLNSSRPGSAAVARPGTSLSRPGSSLGSRCGTASRIRATSAAAFNVGDATSKLYQASRLNPTIYAERETLVKALFQFLYYHEADVQKAHSLCQ # AVLEVERQKPSGSTGCTLSWWWQQQMGRCLLALHYPRRAEPFLQQSLTSFPHPDTYLLLSRVYQRIKQPERALLVIGEVVDSRPFDVTYRLEQARIHQ # AMEQQEDALQLYRLAAKLHPINVESLASIAVGYFYDNNPEMATSGDFNLAKRCLQLCLTSDAQNGAALNNLAVLAAQSGDILGAKSYLNAAKDVMPDA # AEVLVPAPPTAPPAPRYVVRSWTSVRLLGQQQPKTLYFLVDAKSRVREVYTQTCLHFATQGMLDTELFGLAVLIDGEYMFADPESKLSKYGPKSWRSS # HTHGLDANGRPLLELHFRVQFYIESPFMLKDETSRHNYYLQLRHNILQRDLPREQAEQALVFLAGLALQADLGDAPPGTSNSKDDSGEETSASPSNGG # RGLSATTTLPKISKRANERMLRLSTYVASTSKRETIPLPPSLPPNGADYYRIEDYLPSGLHTPWARSAMRACHREHLGMATAEAELLYIQQACSLHET # INAHTYRMRLAKSEQGSGSAWFVVYAKGIKILGGESTNSSSNPETTTFLWPNITKLSFERKKFEIRSGESRITLYAASDEKNKLLLTLCKDTHQWSMK # LAARLKEVSKREEEEAAESQRLHASYACSRSLLLPYKSKNEQRISVISSTSSNTTSGIVSDRVHSEDELEIMINTPPAPLAAPSTESLALAHLLDRPS # VSRQTSSVGQMSLKDLEEQLAALSVRPQDASSNGATIVTNSSVQRNSMGTTANDSSTATDSPSSQHNIGSQCSSTCSTVVVTSPVNGAGASSSGAPIP # VHSTSSSLELGFSHTAQNSALSETSPDDFLSTSAREETESVSGASGVYTLAHGAPPTETSGVYTMHSSELTGQSSEIAESEKSSHYGMFQPQKLEETH # VQHSDSVDGKKKEDFRPRSDSNVSTGSSFRGDGSDPTDNKHSLLSAEELTNLIVGRGTYPSRKTVSSSLHSDCDYVTLPLGDQGEEEVDQPPAPPPPY # SARHEKTGLCGPPIAKPIPKPIAVVAPKPDSPPCSPPVPPAPIPAPPPAIRRRDPPPYSISSKPRPTSLISVSSSAHPAPSAAGSMSSLKSEEVTARF # ITTRPQISILKAHTSLIPDGAKPSYAAPHHCSSVASSNGSVCSHQLSQQSLHNSNYAGGSQASLHHHHVPSHHRHSGSAAIGIVPYGLHKSTASLHHQ # QSCVLLPVIKPRQFLAPPPPSLPRQPPPPPPPNHPHLASHLYEREMARKQLELYQQQLYSDVDYVIYPIQDPAVSQQEYLDAKQGSLLAAMAQAAPPP # PHHPYLAMQVSPAIYRSTPYLPLTLSTHSRYASTQNLSDTYVQLPGPGYSPLYSPSMASLCSSYEPPPPPPLHPAALAAAAAAGAGSSSSSMFARSRS # DDNILNSLDLLPKGKRLPPPPPPPYVNRRLKKPPMPAPSEKPPPIPSKPIPSRMSPIPPRKPPTLNPHHANSPLTKTSSGAQWAGERPRPDLGLGLGL # NRGNNSILAQLQASMVAQSHAQAQAQALDIALLREKSKHLDLPLISALCNDRSLLKQTKVVINPKTGQEMPTSSAQPSGATTNGVANSSAGAGTLSKA # RKGSTVSHRHPQDKLPPLPVQQLAEANNYVIDPAVMMKQQQQQQQHNKTS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/8 # CDS introns: 0/7 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 19 # RM: 19 # incompatible hint groups: 3 # RM: 3 # end gene g67 ### # start gene g68 chr2L AUGUSTUS gene 449431 450794 0.61 - . g68 chr2L AUGUSTUS transcript 449431 450794 0.61 - . g68.t1 chr2L AUGUSTUS stop_codon 449431 449433 . - 0 transcript_id "g68.t1"; gene_id "g68"; chr2L AUGUSTUS CDS 449434 450540 0.62 - 0 transcript_id "g68.t1"; gene_id "g68"; chr2L AUGUSTUS CDS 450666 450794 0.81 - 0 transcript_id "g68.t1"; gene_id "g68"; chr2L AUGUSTUS start_codon 450792 450794 . - 0 transcript_id "g68.t1"; gene_id "g68"; # protein sequence = [MCCKCCGETQRKVWVFGLGSVFLLLGILIVVFWPGIADNLVEDGLTLKPGTDAYESWLEAPIPIYLSFYMFNWTNPED # IRNPDIKPNFVEMGPYTFLEKHKKENYTFYDNATVAYYERRTWFFDPERSNGTLDDMVTAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTK # PVGEWIFEGYQDNITDFLNLFNTTKIDIPYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFYEMPCGIVNGTTGDMFPPKMNVN # DEITIFATDACRFMNLRPRGTYENHGLTATKWVGTEETLDSGENYPNQACFCDEARFDECPKTGVVECKACRDKAPIYSSFPHFYLADQSYVDAVSGM # KPEKEKHEFFLAVEPITGVPVQVHGRIQINMMIEPDDDFE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g68 ### # start gene g69 chr2L AUGUSTUS gene 453262 454934 0.67 + . g69 chr2L AUGUSTUS transcript 453262 454934 0.67 + . g69.t1 chr2L AUGUSTUS start_codon 453262 453264 . + 0 transcript_id "g69.t1"; gene_id "g69"; chr2L AUGUSTUS CDS 453262 454270 0.84 + 0 transcript_id "g69.t1"; gene_id "g69"; chr2L AUGUSTUS CDS 454810 454931 0.82 + 2 transcript_id "g69.t1"; gene_id "g69"; chr2L AUGUSTUS stop_codon 454932 454934 . + 0 transcript_id "g69.t1"; gene_id "g69"; # protein sequence = [MQLIKCLVIIQLSLLLVEESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLS # NPDKRKTYDRCGEECLKKEGMMDHGGDPFSSFFGDFGFHFGGDGQQQDAPRGADIVMDLYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNCRQEMVT # RNLGPGRFQMIQQTVCDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRKNDDLYTNVTISLQDALVGFSM # EIKHLDGHLVPVTREKVTWPGARIRKKGEGMPNFENNNLTGNLYITFDVEFPKKDLTEEDKEGIRKKGEGMPNFENNNLTGNLYITFDVEFPKKDLTE # EDKEG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g69 ### # start gene g70 chr2L AUGUSTUS gene 456196 458390 0.63 + . g70 chr2L AUGUSTUS transcript 456196 458390 0.63 + . g70.t1 chr2L AUGUSTUS start_codon 456196 456198 . + 0 transcript_id "g70.t1"; gene_id "g70"; chr2L AUGUSTUS CDS 456196 456468 0.96 + 0 transcript_id "g70.t1"; gene_id "g70"; chr2L AUGUSTUS CDS 456539 456729 0.97 + 0 transcript_id "g70.t1"; gene_id "g70"; chr2L AUGUSTUS CDS 456797 457338 0.83 + 1 transcript_id "g70.t1"; gene_id "g70"; chr2L AUGUSTUS CDS 457414 458387 0.68 + 2 transcript_id "g70.t1"; gene_id "g70"; chr2L AUGUSTUS stop_codon 458388 458390 . + 0 transcript_id "g70.t1"; gene_id "g70"; # protein sequence = [MDSHSGQASGKSTTSEFPRFKPALPRQINLKVKLPLECPLHPFRDVFAPRQDAKQRDRPTQWTCRKCGKSFYQEKHLD # LHFDTRHKSIINEAEDAVCLADFCDIMRCEVFETEDASSLKFGDQHIVTDIEVWGDSLGQNSALAKANAAYLSLIPRTSTLGASRAAKVQNRQLLQDK # PSQASKQNQSPAGERTHPQSHHHPRDRASTTANPLRLDPSPEDGSAARPRSAGEKLLNKLKELGKAHLKPAADPEASRQNETGEEEDEKGSGQPEGSG # QSADEVKTEEGSGANGNGNKARANCKPEELSKLKNRCEILLRSCIGGLLLSMSDQAFKEMEGGVLVLDLRSILGGWSLGAPSLSLGSNRDPDLRTLHW # DLLLLLHYLDPVRVSVSWPPVSSIEIERTQVTCFSSEETTINANHYYGQGSIGAGGSIYMPGAAAGHHYHVDYATRHDLDLDAGGIAGQQQQQQHLLQ # EQQYYYQQQQQQQQQAASVRDLYPEQVQYHRHSPRHYIADQRPVGPTVGTPTQGAVRSSSSNANTPLHHRVQHSGQHPHLQHRHSTSLAYPQDILDRR # DYTSSSSRQIATNIVAGSGSGQGAGAPGDTQRHYNTHPRPLETRHRHVGSSQQSLRASASTHEIVQQEAGLGQNEHYIYVTYPPDLKKRYFE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 2 # RM: 2 # end gene g70 ### # start gene g71 chr2L AUGUSTUS gene 460515 464933 0.79 - . g71 chr2L AUGUSTUS transcript 460515 464933 0.79 - . g71.t1 chr2L AUGUSTUS stop_codon 460515 460517 . - 0 transcript_id "g71.t1"; gene_id "g71"; chr2L AUGUSTUS CDS 460518 464933 0.79 - 0 transcript_id "g71.t1"; gene_id "g71"; chr2L AUGUSTUS start_codon 464931 464933 . - 0 transcript_id "g71.t1"; gene_id "g71"; # protein sequence = [MQAVMDTAAMAIAMGSSGSGSVSGLSSGSSSGPGSSSSGSSSSGYGSATTTPTSGGHYDNSPTSMPMATIATVAPFYS # EALTSLDAQQRQQQQQQQQQNPSHYYPQNYGYGNSLPLDPAYNYSGAPYNSYSSGAVGQQLSGNSYPVSGTRYEKLTPAAGAKYGGNPIGATGTGIKP # QATATPFYAQPLSGGAAGSGGYVSQSNAAYDPYKYKIPSAQAATHPMMPSNMAGSAVPGTSYGLPLNPGAVPQKQTQMSQQTQLTQLEPNYAAIKPSR # SYQGMSTAAVYGGTGGNSSGVMNNPTSAQYYDKYGMAMSMYSPNGGLPMYSQPDMGPDSAGLQSYRKPTNNCHWGVDYNSPNYRSLPPATGPNSTYHH # PHPAPGPGPGPGPGPGHGTINSELYYGSTKYDKYGSTGVSPYVSNPYGVPSITQSYASRNLWSGTENAPLSSRQNCCSQGYPLNQQNCYYPRGNGYGY # GTSGSAPQSQPQYPGTGPPAAAMKLKHPTDMYVGHGPYEATPSQLGYGYSPQALSGSTTSNNLNNQRYTAPMGLGMGGMGIGMGMGMGMDPGSGGYYN # DLSLNTLDSYVSPTMPQQSLRTQPYQDYRKRSGIVGPTSSGNCYLGQTGNSVGGSLTNLDAQVENYVGFNLHAAAPSNITYTVESTKGTQNYNIRDFL # STWKVDDEDETSAVLEMDPPAVAVVAPVPSTPNFMYESLPPTGPQATAVVDHQGINLPDIIIDIEKANGNGSGPVDDSFGSFDVEKELDELRLKTNAS # DQQPVNESDALAEILRQPDPDSLIEQSADPPMPSPILNCNESYENLPQPPVPMDFDQNNSSNSNESTFAKEYETFIHKIDGSESDPGEATGRVEGEYR # ENPKRFKFYKRKRRTTDPQDRLDQKDEEQQVGICQNQNEISLSAKTLARASKKLLAKKRRNRINLLKILEFESPKIKYRHYFRILKVLRKKTAYSKNR # ELRSILMKKQLNILKEKRLPLIKRLMKKYDATPDLRNPPSLKGLSVSALNSSEFRSSILSGTDRETVIKSAYSYKDKTEEVHEEPNLEEQGMDTSSLE # LQSNFKGFDDIENTNMSPKIKLRVELDDEGSEKSPIKRAVEHEVQNKEEQIQAWLKNSVVPTPEPEIEAEIPKQEAGVAESSSSSSSSSSSSSSSSSD # EDSSSSSSQEDEGVSSSSSSSSSTSSLSSLAGEESDFNELAALEKELSQSQTGEHMGELSPREMIVKKETPEKLHQEVEVSNHDIAKLKQILESDGEA # KPSDLSKIALNSSLKSNELVVREEMETDLLEASESPDRCGSAPTPRELSVEEALAEMYQLSDLEGKEEDEEPNTNGQDVLLINLAEIFDSSSDLYVVQ # CDMNENILGVVANEDQEAEVQPNQASLGQVSPAAEEQADTLQLIQLLAEPQPEFDATPLIHHEEVIHDEKPDPQKDRRELLKYLHGKYVQSRISRFYH # AHRVLRKYKRQRAGKKRLGKVK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 5 # RM: 5 # end gene g71 ### # start gene g72 chr2L AUGUSTUS gene 473428 475802 0.35 + . g72 chr2L AUGUSTUS transcript 473428 475802 0.35 + . g72.t1 chr2L AUGUSTUS start_codon 473428 473430 . + 0 transcript_id "g72.t1"; gene_id "g72"; chr2L AUGUSTUS CDS 473428 473937 0.38 + 0 transcript_id "g72.t1"; gene_id "g72"; chr2L AUGUSTUS CDS 474054 474765 0.99 + 0 transcript_id "g72.t1"; gene_id "g72"; chr2L AUGUSTUS CDS 475036 475178 0.99 + 2 transcript_id "g72.t1"; gene_id "g72"; chr2L AUGUSTUS CDS 475233 475799 0.92 + 0 transcript_id "g72.t1"; gene_id "g72"; chr2L AUGUSTUS stop_codon 475800 475802 . + 0 transcript_id "g72.t1"; gene_id "g72"; # protein sequence = [MGGGQNMMQDPLNALQNLASQGNRNPQMMPMGAGGGAPVPGGPGTASNLLQSLNQQRPGQQQMQPMSNIRGQMPMGAG # GAGAQQMMQVQQMQQGGNAPGVMNVMGAGGGQNQGQIVGNPGQQMGVGVGMPNQMVGPGPNSGPAVGGAGGPNAAPGAGGPGPNQMQGGPMNMGMNPM # MRMGQGNGMGGPQGMPGQGMQGMPQGPHNVVGGPAGQQQVGGAGLPPNAVQQGGMNPMGGMGVNMPPNLQQKPNMPMGQAGQMFPGNRGGVGVGGQQP # GQPFMRSSPSPADAQQLQQQAQLQQMQQQQQQLVVGNQTPTQQPPTPQMPTPNMIPSPALVPQSSPQMMQMQNSQRNIRQQSPSASINTPGQVTGNSP # FNPQEEALYREKYKQLTKYIEPLKRMLAKISNDGTNVEKMTKMSKLLEILCNPTQRVPLETLLKCEKALEKMDLISYSGQQFGKSSNPLLEVINTTLQ # SPVANHTLYRTFRPTLELLFGTDITAPVPAKRPRVEEKSTSFEQEVPHVLQGEIARLDTKFKVKLDTTSQINNKAIRLICCLDDKRLPSVPPVSVSVP # EEYPWQAPDCSLAEQEYSATPFLQTVQQALIARISKLPKNYSLSHLLDTWEMAVRQACSPQSKPRAVCELSTLLGV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g72 ### # start gene g73 chr2L AUGUSTUS gene 476987 479475 0.58 - . g73 chr2L AUGUSTUS transcript 476987 479475 0.58 - . g73.t1 chr2L AUGUSTUS stop_codon 476987 476989 . - 0 transcript_id "g73.t1"; gene_id "g73"; chr2L AUGUSTUS CDS 476990 478204 1 - 0 transcript_id "g73.t1"; gene_id "g73"; chr2L AUGUSTUS CDS 479407 479475 0.58 - 0 transcript_id "g73.t1"; gene_id "g73"; chr2L AUGUSTUS start_codon 479473 479475 . - 0 transcript_id "g73.t1"; gene_id "g73"; # protein sequence = [MDMDTLLPSPPATPPLRENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNGGIITPNPSDTEDEAPEIAVPNKKPRLE # QPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVSSSSQDENSSSSTSCCSSSSNTNTSTSSVPPTVEDDYPEANVWRNLKFKMNRKRAAEVALPPV # QTPETPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQSPTPVPKTPTMSEEKLTTRITAAQAAATRSRIYECSFPDCGKNY # FKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKANGVNRHVSLANNNTSASVAASL # CDASLHLRAIAPAGSSASSSPISSASLQVYSAQDLLRLQQQASSFTFGGTLLQVQR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g73 ### # start gene g74 chr2L AUGUSTUS gene 533607 539956 0.47 + . g74 chr2L AUGUSTUS transcript 533607 539956 0.47 + . g74.t1 chr2L AUGUSTUS start_codon 533607 533609 . + 0 transcript_id "g74.t1"; gene_id "g74"; chr2L AUGUSTUS CDS 533607 533745 0.47 + 0 transcript_id "g74.t1"; gene_id "g74"; chr2L AUGUSTUS CDS 536023 536966 0.99 + 2 transcript_id "g74.t1"; gene_id "g74"; chr2L AUGUSTUS CDS 537037 537431 1 + 0 transcript_id "g74.t1"; gene_id "g74"; chr2L AUGUSTUS CDS 537549 537749 1 + 1 transcript_id "g74.t1"; gene_id "g74"; chr2L AUGUSTUS CDS 537863 539452 1 + 1 transcript_id "g74.t1"; gene_id "g74"; chr2L AUGUSTUS CDS 539518 539953 1 + 1 transcript_id "g74.t1"; gene_id "g74"; chr2L AUGUSTUS stop_codon 539954 539956 . + 0 transcript_id "g74.t1"; gene_id "g74"; # protein sequence = [MNKGSILGICSFIWLPSISFPGRDRDLGQIVRLFMAANNAHRVKLPNSKDLSAQDIGEQKQQQMEDQLEDQLNDSRDP # QNNNNNIDDDADEDAEFEEPEKANPQQDQDLGETEMEQEHDLQQEDLQQELPANSPSTPPRSPSSPQLIPKLEQPATPPSEPEASPCPSPSPCPTPKY # PKVRLNALLASDPALKPDAKELTLPDSRLLAPPPLVKPDTQAQPEVAEPLLKPARFMCLPCGIAFSSPSTLEAHQAYYCSHRIKDTDEAGSDKSGAGG # SGATAGDAAGLTGGSTEPPAKMARTGKQYGCTQCSYSADKKVSLNRHMRMHQTSPAAPTLAGLPSLLQNGIAPPGVTPNPMEDSSSQQTDRYCSHCDI # RFNNIKTYRAHKQHYCSSRRPEGQLTPKPDASPGAGSGPGSAGGSIGVSAQAATPGKLSPQARNKTPTPAMVAVAAAAAAAAASLQATPHSHPPFLAL # PTHPIIIVPCSLIRAASFIPGPLPTPNSGIVNPETTCFTVDNGTIKPLATALVGATLEPERPSAPSSAAEATEAKSSPPEPKRKEAGLTRESAPLDLS # LRRSPITLNSLSLRQRQLRNALLDVEEVLLAGVGTGKENVETPRGGGSVTPEQIVCAPSLPSSPSMSPSPKRRAISPRSSGAGSASSMSPPGLNVAVP # HLLDMRSMLPADFGLSESLLAKTNPELALKLAAAAAAAAVAGSSGAAAFPPASLPAQTSSGNPGSGGSAGGAQQPQIYVKKGVSKCMECNIVFCKYEN # YLAHKQHYCSARSQEGASEVDVKSAVSPSIAGAGGLGAGAAEAASSVETTPVAYQQLICAACGIKYTSLDNLRAHQNYYCPKGGAVAAPAATPTDPGQ # LGMPKEKCGKCKTLHEIGLPCPPPVANPLAAPTVNPQPATNSLNKCPVCGVVSPTAALAKKHMEMHGTVKAYRCSICQYKGNTLRGMRTHIRTHFDKK # TSDVNEELYMTCIFEEDASALSQELVTPTGASTTTGHDSMDHPSQMFNCDYCNYVSTYKGNVVRTPFYCCQTKELTIAFSLQLRHMKLMHPHVAINSP # SISPDTRDQDVTSNPTTNQHSNSDVSNGEAPSFHIKSEPLDPPPTVNLVHENNNSPIATPHIKAEPIEVGADAAPGGLVPPMTSPLGNSSSVAAAAAA # AAEVMKKYCSTCDISFNYVKTYLAHKQFYCKNKPIRPEASDSPSPNHLGGGVAVGLGIGGLVGGHGQQKNKENLQEAAI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 3 # RM: 3 # incompatible hint groups: 3 # RM: 3 # end gene g74 ### # start gene g75 chr2L AUGUSTUS gene 541768 542247 1 - . g75 chr2L AUGUSTUS transcript 541768 542247 1 - . g75.t1 chr2L AUGUSTUS stop_codon 541768 541770 . - 0 transcript_id "g75.t1"; gene_id "g75"; chr2L AUGUSTUS CDS 541771 542247 1 - 0 transcript_id "g75.t1"; gene_id "g75"; chr2L AUGUSTUS start_codon 542245 542247 . - 0 transcript_id "g75.t1"; gene_id "g75"; # protein sequence = [MSGIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFKDDYPTSPPKCKFE # PPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIYCQNRLEYEKRVRAQARAMAATE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g75 ### # start gene g76 chr2L AUGUSTUS gene 543241 544542 0.98 - . g76 chr2L AUGUSTUS transcript 543241 544542 0.98 - . g76.t1 chr2L AUGUSTUS stop_codon 543241 543243 . - 0 transcript_id "g76.t1"; gene_id "g76"; chr2L AUGUSTUS CDS 543244 543349 1 - 1 transcript_id "g76.t1"; gene_id "g76"; chr2L AUGUSTUS CDS 543416 544266 0.99 - 0 transcript_id "g76.t1"; gene_id "g76"; chr2L AUGUSTUS CDS 544333 544542 0.99 - 0 transcript_id "g76.t1"; gene_id "g76"; chr2L AUGUSTUS start_codon 544540 544542 . - 0 transcript_id "g76.t1"; gene_id "g76"; # protein sequence = [MAEEVIGTVKEVLKGIIENVNAPKNESAPGEKKPSTPEGMAVAYSSLVVMAMLPIIFGSIRSVKLHKLKKSTGEKADT # MTKKDAMYFPLIASAALFGLYLFFKIFQKVHINYLLTGYFFVLGVIALAHLLSPVINSLMPAAVPKVPFHILFTKGEGKHKEDIVNYKFSTHDIVCLV # ISSAIGVWYLLKKHWIANNLFGLAFAINGVEMLHLNNFVTGVILLSGLFFYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLIENGLNASNFAMLGLGD # IVIPGIFIALLLRFDDSKKRKTRIYFYSTLIAYFLGLLATIFVMHVFKHAQPALLYLVPACMGTPLLVALIRGELKVLFAYEDHPEEKPEKKEKKEKD # EGVSSSGSKKKESKKGK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g76 ### # start gene g77 chr2L AUGUSTUS gene 545192 546953 0.38 + . g77 chr2L AUGUSTUS transcript 545192 546953 0.38 + . g77.t1 chr2L AUGUSTUS start_codon 545192 545194 . + 0 transcript_id "g77.t1"; gene_id "g77"; chr2L AUGUSTUS CDS 545192 545306 0.38 + 0 transcript_id "g77.t1"; gene_id "g77"; chr2L AUGUSTUS CDS 545371 545564 1 + 2 transcript_id "g77.t1"; gene_id "g77"; chr2L AUGUSTUS CDS 545816 546443 1 + 0 transcript_id "g77.t1"; gene_id "g77"; chr2L AUGUSTUS CDS 546565 546950 1 + 2 transcript_id "g77.t1"; gene_id "g77"; chr2L AUGUSTUS stop_codon 546951 546953 . + 0 transcript_id "g77.t1"; gene_id "g77"; # protein sequence = [MTTTPKIKAPVSGPGLPLLLQMLMGMLLMGLTSVPGATATADPKNANVKALDRLHAGLFTNYDSDVQPVFQGTPTNVS # LEMVVTYIDIDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQITLKSSEVWTPQITLFNGDEGGLMAETQVTLSHDGHFRWMPPAVYTAYCELNML # NWPHDKQSCKLKIGSWGLKVVLPENGTARGESLDHDDLVQSPEWEIVDSRAHFVSQDYYGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPP # HMGGEKIMINGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVLYLATGKHKRRLPEALRKLLHGHLGTWLLLSVFSTTGES # QAEKTKEMDEHPYEEADEQESSPLGINHTEVPGAKANQFDWALLATAVDRISFVSFSLAFLILAIRCSV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 2 # RM: 2 # incompatible hint groups: 0 # end gene g77 ### # start gene g78 chr2L AUGUSTUS gene 547414 548249 0.81 - . g78 chr2L AUGUSTUS transcript 547414 548249 0.81 - . g78.t1 chr2L AUGUSTUS stop_codon 547414 547416 . - 0 transcript_id "g78.t1"; gene_id "g78"; chr2L AUGUSTUS CDS 547417 547900 1 - 1 transcript_id "g78.t1"; gene_id "g78"; chr2L AUGUSTUS CDS 547978 548249 0.81 - 0 transcript_id "g78.t1"; gene_id "g78"; chr2L AUGUSTUS start_codon 548247 548249 . - 0 transcript_id "g78.t1"; gene_id "g78"; # protein sequence = [MPRPPLLSLSDPYQLLNAASHRLVAQGSGGQIQLWQFLLELLADSSNANAISWEGQSGEFRLIDPDEVARRWGERKAK # PNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGLMAACQAQAQGGDPASSMLGSYNHHAGGAMQLGRHPPPLHHHPQHSHPHHQLGQPHFLHPH # HSSPASNSSSLGFPSSSTASSQASPGQAPASSSASTSNFTAPFQGGTAGVDPARTSTSSAGNYDQGPVTPTTNAFN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g78 ### # start gene g79 chr2L AUGUSTUS gene 548838 550103 0.34 + . g79 chr2L AUGUSTUS transcript 548838 550103 0.34 + . g79.t1 chr2L AUGUSTUS start_codon 548838 548840 . + 0 transcript_id "g79.t1"; gene_id "g79"; chr2L AUGUSTUS CDS 548838 549216 0.34 + 0 transcript_id "g79.t1"; gene_id "g79"; chr2L AUGUSTUS CDS 549958 550100 0.75 + 2 transcript_id "g79.t1"; gene_id "g79"; chr2L AUGUSTUS stop_codon 550101 550103 . + 0 transcript_id "g79.t1"; gene_id "g79"; # protein sequence = [MSDRWTHHPVPFVHSYFLGPRHRSPEMPEISWLPLSNLLVPLILRLAAGICPAEIPMNFGALTIEDHRGVRMLVVLVV # VVVVVVHGTVVRMGVLPNWRGRLHPEAKAPVEVLREAPHDAHVHADAHGTYYWWLWHCEQGMALIQFVPCKGGGDSDMGATTVAHNKCNLRDGDDA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 1 # RM: 1 # end gene g79 ### # start gene g80 chr2L AUGUSTUS gene 551141 551857 0.95 - . g80 chr2L AUGUSTUS transcript 551141 551857 0.95 - . g80.t1 chr2L AUGUSTUS stop_codon 551141 551143 . - 0 transcript_id "g80.t1"; gene_id "g80"; chr2L AUGUSTUS CDS 551144 551857 0.95 - 0 transcript_id "g80.t1"; gene_id "g80"; chr2L AUGUSTUS start_codon 551855 551857 . - 0 transcript_id "g80.t1"; gene_id "g80"; # protein sequence = [MAILQNSRQSHKQLPIISQTIRSAWCQQRPINAMHQDVRQKSIGSGNETKLEAKETEVPTNRRRRRRRCSSSSTSDSS # ASSYSSTDSDSGSSTSSSSIRSQLPALNLPVPLPLATPTPPAVSSPHQAPSPRRNSSDSNRSVSPVEVPVDPHAWTPEDIASWVRWATRKFKLDPEPD # IDRFPKDAQELCDLSRADFWVCAGSRRGGMLLAQHFAISLYHATGRETSPMLNDDEPSECLR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g80 ### # start gene g81 chr2L AUGUSTUS gene 553937 558762 0.71 - . g81 chr2L AUGUSTUS transcript 553937 558762 0.71 - . g81.t1 chr2L AUGUSTUS stop_codon 553937 553939 . - 0 transcript_id "g81.t1"; gene_id "g81"; chr2L AUGUSTUS CDS 553940 554274 0.99 - 2 transcript_id "g81.t1"; gene_id "g81"; chr2L AUGUSTUS CDS 554336 555446 0.9 - 0 transcript_id "g81.t1"; gene_id "g81"; chr2L AUGUSTUS CDS 555510 557665 0.99 - 2 transcript_id "g81.t1"; gene_id "g81"; chr2L AUGUSTUS CDS 557722 557882 0.99 - 1 transcript_id "g81.t1"; gene_id "g81"; chr2L AUGUSTUS CDS 557943 558541 0.8 - 0 transcript_id "g81.t1"; gene_id "g81"; chr2L AUGUSTUS CDS 558616 558762 1 - 0 transcript_id "g81.t1"; gene_id "g81"; chr2L AUGUSTUS start_codon 558760 558762 . - 0 transcript_id "g81.t1"; gene_id "g81"; # protein sequence = [MTLYFDTKIEFLDSDAVSTISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVHATSQATALCWHPEKALL # ASGWEHGDIHVWFAGHREFASVNAPHKAAIVLLQFSEQGGRMVTADAMGLVTGWRCDGQYQFLTMFSHDLREVLLLICFRLTVESEVREEMANLAKAA # VAGDENALDTLTNWRPRTAARSMTHSGVRDNHCFYACTQGGVVYYINQGGACVEVMKCGSLPPIVQMLWHPRKDAVICLMEDLTVTLFLVESTGILTE # LDRVKMSGRGGGRQGGIAWSGNSLAIITGDFFVRIWDIERSDNYLLKMDLPSGNQPGSSMTTLSNGTMSSSNQFFSHDSSESSGVLRKTPKYGQLNGE # MFTCLAYSSTGQTLCAGTSQGNVYTWKRSGSRLVGAPEDAWQLTNISSVRGAIRSCEWGYNELAKPCMLVNCLSNVFMLKEQPLLAVHTRELWAVQRS # AKSVQLTHCSGREAIVQSEFAVTAMALSELSLVMSNGRSISSYSLQKVEKSLDEFEEILQTVEGTTPTTESTTTPLSLKLLQTFAAECLALNLCNQNI # FCLGSSDVFVYSVGGVVLHRIQASDIEGKIIGMDLSGCYLSVFTMNGYVKAYDVSRHDPKLLFPSKSGHDIFDDFGEFILVKCNSSGSHLAMVIASSN # FTPISTLFCWDFERSNLLEYGLLEPETNAKKESSTSLPVRIFWDAEEPRLLATEVKSMIQKTLPQKNSLQPSHFVQSKVVLLFYSEKGCLNVLETQSM # SPGCQLLNLCVPNVIRLKINTMEEQPLQDFVDLQQCNPVTRKQVLNFSLYVAEGNMDMAYRSIRSIQSKVIWTNLAKMCVHTNRLDVAKVCMGHLEQA # RSVRALRQAIEDDDLETEAKVAVLAIELGMIEEAKDLYRRCKRFDLLNKLLQSIGHLDEAVELAEAEDRIHLKHTYYQKAQELRERGDIKGALEYFEK # TQNPAQNITQLLLENPGAMKRYIQTTSDPKLLKWWGQYIESSGDMDAALAVYHKAEDWFSQVKILCYLGKISKADAIARQSGDRAACYHLARHYENVG # KFQEAIMFFTRAQTFSNAIRICKENDFQEELWTVASSSRQRDKAIAAAYFEECGNFKHAVELYHRAGMLHKALEMAFESQQPEILEIIASDLAPDSDA # ELINRCADFFCSIEQFQKAVHLLAKTRHLERALGICSEKGVPVTEELSEMLTPEKGEFEEATRVHILVQLGEFLQQQGDYHSATKKFTQAGDKIRAMK # SLLKSGNTDKIIFFANMSRQREVYIMAANYLQALDWQSDPQVLKHIVTFYTKGQAFDSLANFYAICAQIEIEEFQDYGKALTAMQEASKCLEKLSHAQ # HVYNNLQRTVADVKAILEIQQALREGDHQLVIGSCRSMLIKPELPPIRHAHILAMLIRALVYVKDYSEAGRALKELTVKDSTWSASGLLDRSIVHKIA # QECHLEFDLIWNAGRQVTASTSGTAATGMSSTSGMTTTDDDDADDEEITEELH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g81 ### # start gene g82 chr2L AUGUSTUS gene 559699 560315 0.95 + . g82 chr2L AUGUSTUS transcript 559699 560315 0.95 + . g82.t1 chr2L AUGUSTUS start_codon 559699 559701 . + 0 transcript_id "g82.t1"; gene_id "g82"; chr2L AUGUSTUS CDS 559699 560037 0.95 + 0 transcript_id "g82.t1"; gene_id "g82"; chr2L AUGUSTUS CDS 560097 560312 1 + 0 transcript_id "g82.t1"; gene_id "g82"; chr2L AUGUSTUS stop_codon 560313 560315 . + 0 transcript_id "g82.t1"; gene_id "g82"; # protein sequence = [MADRPCAGNILRIAGAVILPNLGGIYNGRLTRQHLQSWYANLKFPSFKPPNSVFAPMWISLYAGMGYGSYLVWRDGGG # FAGEAAKLPLIAYGTQLALNWAWTPIFFGQHNIKGGLIDIVALTAAASACGVLFYRVNKTAGLLFVPYVAWLGFATALNYAIWKLNPEKEQAPKDEEK # PSSSHAKSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g82 ### # start gene g83 chr2L AUGUSTUS gene 560794 563181 1 - . g83 chr2L AUGUSTUS transcript 560794 563181 1 - . g83.t1 chr2L AUGUSTUS stop_codon 560794 560796 . - 0 transcript_id "g83.t1"; gene_id "g83"; chr2L AUGUSTUS CDS 560797 563181 1 - 0 transcript_id "g83.t1"; gene_id "g83"; chr2L AUGUSTUS start_codon 563179 563181 . - 0 transcript_id "g83.t1"; gene_id "g83"; # protein sequence = [MNVEKLKRLQAQVRIGGKGTPRRKKKVMHQTAATDDKKLQSSLKKLSVSTIPGIEEVNIIKDDLTVIHFNNPKAQASL # SANTFAVTGHGETRKVVEMLPDILPQLGQETVVQLRMYANAMNSQKGAPGSGDGPLPAEEDDDVPLLVGDFDEVAKVEATKQPVHEPKESAEIKAKDK # QQQQPKKEQKQSAKVPETTNPSENPKEKQENKKGQAKNNKKGDPQTNKDKTNKSKDQAKGQPAPQANKETTQAAQALKQNPSKPAVQQKKDQVLAVDQ # KIEANGAIQKAQQPKPAETKSTDQKVEPKSAEKQVDKAKPIEQTKTKESKVEHPKPAQKQLDQNTQAKPTAERSEAKPVVPTPEPQKSAPPAVQTLAQ # IVALPAEKPANEAVAAPKAEEQKKDSSGPAKVEPAITPSAPQPVTTAEPPKSALKQDSPPKSAPKQGSPPKNVPKQESPPQSAPKQDSPPKGAPKQDS # PPKGAPKQDSPPKGAPKQDSAPQQKTPPPVKQEVAPAKQDEPPAKQDAPPAKQDAPVPVPEVIKTLAPEVPNVSQAPAQPQGQAALASEKPADAPKAI # EEPKAAPKKESPPPTKPVTATVPVAPATPAEAPSPLAPSTPPSTPTSVPPSAATVTPPSPATVTPPSPAVVTPPQKQSAAPQAGIKKQEAGTKTKQQQ # PANKPQQPQKQPPGGAGGSAGPGGNKGVQKQPNPNAKPAVAPKPAQATPKPAAASPKASPNQTNPQQQQGKAANKASPPKQTGPTGGQQKSAANASKA # TASPKSAASPKATSPKAGTPTNPASASGGPN] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 2 # RM: 2 # end gene g83 ### # start gene g84 chr2L AUGUSTUS gene 564227 566329 0.44 + . g84 chr2L AUGUSTUS transcript 564227 566329 0.44 + . g84.t1 chr2L AUGUSTUS start_codon 564227 564229 . + 0 transcript_id "g84.t1"; gene_id "g84"; chr2L AUGUSTUS CDS 564227 566326 0.44 + 0 transcript_id "g84.t1"; gene_id "g84"; chr2L AUGUSTUS stop_codon 566327 566329 . + 0 transcript_id "g84.t1"; gene_id "g84"; # protein sequence = [MLLRRCFLFPFPAVRLVRRSLHRKHDHIVLHPEIRQALQLQKPVVALESTIITHGMPMPENVVTALAVEEQVRQNGAI # PATIGILDGRIKVGLTREELTSLAEKPRDQVIKCSRRDLPFVVSRRQSGGTTVAATMIIAHRVGIHVFATGGIGGVHRDGHESMDVSADLTELGRTPV # AVVCSGVKSILDIPRTLEFLETQGVCVASFDSPGGVFPDFYTRDSGCTVPYNLKSAQEAAELLRSWRELKMESGLVIGVPIPEEFAADKFKIEEAIKE # ATAQARAQGISGKEVTPFLLAAIAKITEGRSLKSNIALIKNNAKVAAQIAASLCDVSTKLESPVQKAIDKKPLVVGASILDLSFKVDDQKRDMKLDGA # TYSAVAKQAAGGVGRNIAEGIYKLYGDVNLISAVGNDQMGQTLLQMMPKALKRGLIVADNHNTSLCSLIFDKFGDCKLILGNMEIHQSITAETLQAHH # QLFREAPLIIMDSNISEQAMASILQQAQINKIPVFFEPTDMFIAGKPFKLLPELTKNIRLIKPNMQELKTITEAITGETVKWNPETKQPQTELVQQAK # SLIKKIDSHFNCIIATLSDHGVLLSYRGDAENDARLLLDVSKPTPPHSTRFYPAPMVHNIVNVSGAGDSFCAGFITALLRGRSLDECIAGGFVAAERA # LQSESAVPATYFSNQESFESRYKHTARIIQQQSI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g84 ### # start gene g85 chr2L AUGUSTUS gene 566494 568064 0.68 - . g85 chr2L AUGUSTUS transcript 566494 568064 0.68 - . g85.t1 chr2L AUGUSTUS stop_codon 566494 566496 . - 0 transcript_id "g85.t1"; gene_id "g85"; chr2L AUGUSTUS CDS 566497 566624 1 - 2 transcript_id "g85.t1"; gene_id "g85"; chr2L AUGUSTUS CDS 566788 567030 0.7 - 2 transcript_id "g85.t1"; gene_id "g85"; chr2L AUGUSTUS CDS 567089 568064 0.88 - 0 transcript_id "g85.t1"; gene_id "g85"; chr2L AUGUSTUS start_codon 568062 568064 . - 0 transcript_id "g85.t1"; gene_id "g85"; # protein sequence = [MLAKKQKMQETDTEQEATPHTIQARLVSDTGEEAGPPIDLPAGITTQQLGLICNALLKNEEATPYLFFVGEDEIKKSL # EDTLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRL # ASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTV # KMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMT # GHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g85 ### # start gene g86 chr2L AUGUSTUS gene 568406 572650 0.82 + . g86 chr2L AUGUSTUS transcript 568406 572650 0.82 + . g86.t1 chr2L AUGUSTUS start_codon 568406 568408 . + 0 transcript_id "g86.t1"; gene_id "g86"; chr2L AUGUSTUS CDS 568406 568433 0.82 + 0 transcript_id "g86.t1"; gene_id "g86"; chr2L AUGUSTUS CDS 568599 569290 0.92 + 2 transcript_id "g86.t1"; gene_id "g86"; chr2L AUGUSTUS CDS 569348 572647 1 + 0 transcript_id "g86.t1"; gene_id "g86"; chr2L AUGUSTUS stop_codon 572648 572650 . + 0 transcript_id "g86.t1"; gene_id "g86"; # protein sequence = [MENIPRTHEDIEAQISVIQEKKTELAKTTAAAAGVGLLDSGGFFDSDLYDDDAAKGKGRYEGYNTSIAANDAEEVDED # EDDGFPVPQKRTTYTAPASVLKDVTQGKEDVDPMADRRRPTIADREDEYRQKRRHIIISPERADPFADGGKTPDVGSRTYTDIMREQMLKGEESELRR # RILEKTKEGTLVKTVTSSSTSNGDLPAPKDGGRKRGRWDQTVSDSFIPAKMATPSSAATPTWEDKTPGDHRWDETPGHKGSETPGATPGLGTRIWDAT # PAHAVTPGHETPGHEKSARRNRWDETPKTERETPGHSGWAETPKPDRTGSGGGAESISIESTPGASKRRSRWDETPSNATPAITPTNASAMTPNMTPS # MTPHVTPGHATPMLTPGGSTPIGVKAMAMATPSAGALAAMTPEQLQAYRWEKEIDERNRPYTDEELDQIFPPGYKILPPPAGYVPLRTPGRKLMATPT # PIAGTPAGFFIQVEDKNAKFMDNQPKGQNLPFMKPEDAQYFDKLLVDVNEDSLSPEELKERKIMKLLLTIKNGSPPMRKSALRQITDKAREFGAGPLF # NQILPLLMSPTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDEDHYARIEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTAR # AFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKALVEIIEHGLVDEQQKVRTITALAIAALAEAATPYGIESFDSVL # KPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKEEILPHFFKFFWNHRMALD # RRNYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETVEKIMGNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKR # VKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTP # ILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVA # ESCRPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVCPLLEDALMDRDLVHRQTACSAIKHMSLGVYGFGCEDALTHLLNYVWPN # IFETSPHLVQAFMDSVDGLRVSLGPIKILQYTLQGLFHPARKVRDVYWKIYNSLYIGGQDALIAGYPRITNDPKNQYERYELDYTL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g86 ### # start gene g87 chr2L AUGUSTUS gene 573206 574135 0.6 - . g87 chr2L AUGUSTUS transcript 573206 574135 0.6 - . g87.t1 chr2L AUGUSTUS stop_codon 573206 573208 . - 0 transcript_id "g87.t1"; gene_id "g87"; chr2L AUGUSTUS CDS 573209 574135 0.6 - 0 transcript_id "g87.t1"; gene_id "g87"; chr2L AUGUSTUS start_codon 574133 574135 . - 0 transcript_id "g87.t1"; gene_id "g87"; # protein sequence = [MAKSDQELPEGFRQLKTQVAGHTFEESNAEAVGLLQDSKAGCVLKPLGKPECGERELRFYESLAEAGASGDNDLLALL # RGHVPRFYGPLKLVVNRRERTFLRLEDLTRSYAKPCVMDVKMGKRTWDPESSPNKRKVEEAKYVMCKQKLGLCLPGFQVYLPKEEHTQETTILRHGKD # YGKSLNVEGFKQTMALFFNASTSDSKSRRAGCELLLKEVLRQLQEILAWFQRQRLLHFYASSLLICYDYSRLADPPKPLINGYHQNDDDPATWVRVKM # IDFAHVYPAEQGLPDENYMFGLQSLIEVVQSILHR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g87 ### # start gene g88 chr2L AUGUSTUS gene 574641 575102 0.96 + . g88 chr2L AUGUSTUS transcript 574641 575102 0.96 + . g88.t1 chr2L AUGUSTUS start_codon 574641 574643 . + 0 transcript_id "g88.t1"; gene_id "g88"; chr2L AUGUSTUS CDS 574641 574698 0.96 + 0 transcript_id "g88.t1"; gene_id "g88"; chr2L AUGUSTUS CDS 574780 575099 0.96 + 2 transcript_id "g88.t1"; gene_id "g88"; chr2L AUGUSTUS stop_codon 575100 575102 . + 0 transcript_id "g88.t1"; gene_id "g88"; # protein sequence = [MKSWEIAVVLVAAVYLCSQVNFVAGLECYVCSNQTGNTEKCLNTIKTCEPFENVCGTEIRWGSQPYFSEGALKQYYVS # KRCMTKEQCQSKRKRYMQLYCTHIWYEDWACNECCKGDRCNYFVIVGR] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g88 ### # start gene g89 chr2L AUGUSTUS gene 575777 576658 0.21 - . g89 chr2L AUGUSTUS transcript 575777 576658 0.21 - . g89.t1 chr2L AUGUSTUS stop_codon 575777 575779 . - 0 transcript_id "g89.t1"; gene_id "g89"; chr2L AUGUSTUS CDS 575780 576022 0.98 - 0 transcript_id "g89.t1"; gene_id "g89"; chr2L AUGUSTUS CDS 576081 576355 0.27 - 2 transcript_id "g89.t1"; gene_id "g89"; chr2L AUGUSTUS CDS 576514 576658 0.38 - 0 transcript_id "g89.t1"; gene_id "g89"; chr2L AUGUSTUS start_codon 576656 576658 . - 0 transcript_id "g89.t1"; gene_id "g89"; # protein sequence = [MLLLSSLAQKVIREAAFVLNGYKSMATPWPELQKEYSAGQAQIEHDAVGIASQYASDEGLDEMVGLRSLEHRAEEQQP # DRSTSKMLSALFGFSPSTPHPTEMAMVMPHQLPPMYYNDFYEDLVTTKRNDVHSAGCDCKVTNELVDLGGLHFPRFLMNAVCESGAGRDLAKCSHGSN # CRPLEYKVKVLAQTSQSDHPYSWMNKDQPWQFKTVTVTAGCFCTK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g89 ### # start gene g90 chr2L AUGUSTUS gene 577370 579250 0.72 + . g90 chr2L AUGUSTUS transcript 577370 579250 0.72 + . g90.t1 chr2L AUGUSTUS start_codon 577370 577372 . + 0 transcript_id "g90.t1"; gene_id "g90"; chr2L AUGUSTUS CDS 577370 577534 0.73 + 0 transcript_id "g90.t1"; gene_id "g90"; chr2L AUGUSTUS CDS 577747 578033 0.83 + 0 transcript_id "g90.t1"; gene_id "g90"; chr2L AUGUSTUS CDS 578155 578420 0.99 + 1 transcript_id "g90.t1"; gene_id "g90"; chr2L AUGUSTUS CDS 578484 579247 1 + 2 transcript_id "g90.t1"; gene_id "g90"; chr2L AUGUSTUS stop_codon 579248 579250 . + 0 transcript_id "g90.t1"; gene_id "g90"; # protein sequence = [LFVGSPRVCECQWTVVDFYGFCRRTARTVTVPRGNPKSSSVEFASSRQEQCPCHKFFRRGICRSGKARRSSDAKPSKC # RRKSLKNRKTHGDYVTTRLKSPILAEGDIEIERDPHLSGHYSPPTPPTSTFTNRKLRIRMDKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFF # REELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMSPSR # LSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHASDPIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLD # MTDGSSAYDEMKFLSVDVDQFTIDSFKADCILSMEQSQMQAYGGHSQLVGSSNELCLDGIGMSSFGMEEGEPKSPPSLLVLDKSLPSLSIGVEGIADL # VEQLHHHQHEGGPVGGGVITGDVM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g90 ### # start gene g91 chr2L AUGUSTUS gene 583100 583501 0.99 - . g91 chr2L AUGUSTUS transcript 583100 583501 0.99 - . g91.t1 chr2L AUGUSTUS stop_codon 583100 583102 . - 0 transcript_id "g91.t1"; gene_id "g91"; chr2L AUGUSTUS CDS 583103 583501 0.99 - 0 transcript_id "g91.t1"; gene_id "g91"; chr2L AUGUSTUS start_codon 583499 583501 . - 0 transcript_id "g91.t1"; gene_id "g91"; # protein sequence = [MISGKTRREAFTPATPQMGDGNGDPSLTANGPGKWQVGGGGQPVSSFDGHFDGFASNQLEHGHGPHKGSGEAKHGAGQ # SMCNRIFSAPRQMYLHVLCRHLLAIFILALRIGRGSCHNKMEKPLKSSPAQSESL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g91 ### # start gene g92 chr2L AUGUSTUS gene 584179 594206 0.42 - . g92 chr2L AUGUSTUS transcript 584179 594206 0.42 - . g92.t1 chr2L AUGUSTUS stop_codon 584179 584181 . - 0 transcript_id "g92.t1"; gene_id "g92"; chr2L AUGUSTUS CDS 584182 584445 1 - 0 transcript_id "g92.t1"; gene_id "g92"; chr2L AUGUSTUS CDS 592272 592633 1 - 2 transcript_id "g92.t1"; gene_id "g92"; chr2L AUGUSTUS CDS 593588 594206 0.43 - 0 transcript_id "g92.t1"; gene_id "g92"; chr2L AUGUSTUS start_codon 594204 594206 . - 0 transcript_id "g92.t1"; gene_id "g92"; # protein sequence = [MVETNSPPAGYTLKRSPSDLGEQQQPPRQISRSPGNTAAYHLTTAMLLNSQQCGYLGQRLQSVLQQQHAQHQQSQSQT # PSSDDGSQSGVTILEEERRGGAAAASLFTIDSILGSRQQGGGTAPSQGSHISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAAASPIRPQRV # PAMLQHPGLHLGHLAAAAASGFAASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHHGQHHLSHLG # HGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQERLRKLQEEQCGSTTNGTTNSSSGTTS # STGNGSLTVKCPGSDHYSAQLVHIKSDPNGYSDADESSDLEVA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 4 # RM: 4 # incompatible hint groups: 1 # RM: 1 # end gene g92 ### # start gene g93 chr2L AUGUSTUS gene 594256 603339 0.33 + . g93 chr2L AUGUSTUS transcript 594256 603339 0.33 + . g93.t1 chr2L AUGUSTUS start_codon 594256 594258 . + 0 transcript_id "g93.t1"; gene_id "g93"; chr2L AUGUSTUS CDS 594256 594367 0.35 + 0 transcript_id "g93.t1"; gene_id "g93"; chr2L AUGUSTUS CDS 603074 603336 0.71 + 2 transcript_id "g93.t1"; gene_id "g93"; chr2L AUGUSTUS stop_codon 603337 603339 . + 0 transcript_id "g93.t1"; gene_id "g93"; # protein sequence = [LGVLTTVILNLAFEGGMSGVVLGVVVVVPPPPPPGVHIYQSLFEWHHNHVMSLCPEVNPNLDQDLEDIPKETGTFHCL # DYVYESSSEDEEIEPIDEGYLKFLEVTIKHQQELRDRRTAQTTDSLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 11 # RM: 11 # incompatible hint groups: 1 # RM: 1 # end gene g93 ### # start gene g94 chr2L AUGUSTUS gene 640959 665882 0.72 - . g94 chr2L AUGUSTUS transcript 640959 665882 0.72 - . g94.t1 chr2L AUGUSTUS stop_codon 640959 640961 . - 0 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 640962 644314 0.85 - 2 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 644437 645716 1 - 1 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 647989 648361 1 - 2 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 648479 648886 1 - 2 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 648991 649765 0.99 - 0 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 649934 650293 1 - 0 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 652786 653288 1 - 2 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 654247 654700 1 - 0 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 655274 655866 0.92 - 2 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 656712 657384 0.97 - 0 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS CDS 665691 665882 0.93 - 0 transcript_id "g94.t1"; gene_id "g94"; chr2L AUGUSTUS start_codon 665880 665882 . - 0 transcript_id "g94.t1"; gene_id "g94"; # protein sequence = [MTGVCNSFVAKANGDPKMSKKKYGWPQKQKPRQLEPQTIGTGIACTEEWVSPGKTSAGRGSPTQVSASDPDCGVNAMV # NYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVA # TDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPR # GTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISV # PESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEK # DEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAK # TRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTP # VRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYR # LGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDR # HSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYF # PQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEV # VAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVY # RATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDT # SNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQ # IQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDREL # QASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGAL # SASQSLASESGKLLHLEVVARDKGNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNEDGILS # LDSLSGEIRVNKPHLLDYDRFSTPSMSALSRGRALHYEEEIDESSEEDPNNSTRSQRALTSSSFALTNSQPNEIRVVLVARTADAPFLASYAELVIEL # EDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTG # TATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIAS # DAAHEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQP # AVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAIIAGNEESAFELLQSKAIVLVKPL # DRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHM # FTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYS # IGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDS # DSGPDGRVVYQLSAPHSHFKVNRSSGAVLIKRKLKLDGDGDGNLYMDGRDISLVISASSGRHNSLSSMAVVEIALDPLAHPGTNLASAGGSSSGSIGD # WAIGLLVAFLLVLCAAAGIFLFIHMRSRKPRNAVKPHLATDNAGVGNTNSYVDPSAFDTIPIRGSISGGAAGAASGQFAPPKYDEIPPFGAHAGSSGA # ATTSELSGSEQSGSSGRGSAEDDGEDEEIRMINEGPLHHRNGGAGAGSDDGRISDISVQNTQEYLARLGIVDHDPSGAGGGASSMAGSSHPMHLYHDD # DATARSDITNLIYAKLNDVTGAGSEIGSSADDAGTTAGSIGTIGTAITHGHGVMSSYGEVPVPVPVVVGGSNVGGSLSSIVHSEEELTGSYNWDYLLD # WGPQYQPLAHVFSEIARLKDDTLSEHSGSGASSSAKSKHSSSHSSAGAGSVVLKPPPSAPPTHIPPPLLTNVAPRAINLPMRLPPHLSLAPAHLPRSP # IGHEASGSFSTSSAMSPSFSPSLSPLATRSPSISPLGAGPPTHLPHVSLPRHGHAPQPSQRGNVGTRM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/11 # CDS introns: 0/10 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 8 # RM: 8 # incompatible hint groups: 0 # end gene g94 ### # start gene g95 chr2L AUGUSTUS gene 675259 675726 0.34 + . g95 chr2L AUGUSTUS transcript 675259 675726 0.34 + . g95.t1 chr2L AUGUSTUS start_codon 675259 675261 . + 0 transcript_id "g95.t1"; gene_id "g95"; chr2L AUGUSTUS CDS 675259 675723 0.34 + 0 transcript_id "g95.t1"; gene_id "g95"; chr2L AUGUSTUS stop_codon 675724 675726 . + 0 transcript_id "g95.t1"; gene_id "g95"; # protein sequence = [MMTMASMAVTNEQPTANGLSGRGAVQKATTMASPSQVSQLNHHRRFNQQPTGTTKESNSVFGIVFPARECKTAAQKEL # GIAAKNDERSRRRRWQEEGAPENGFQFHKTWTLFLGRLLRSSSSLAVSSHLINTELGRLWRKGRGLVFKKENRFRTK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g95 ### # start gene g96 chr2L AUGUSTUS gene 705859 707766 0.5 - . g96 chr2L AUGUSTUS transcript 705859 707766 0.5 - . g96.t1 chr2L AUGUSTUS stop_codon 705859 705861 . - 0 transcript_id "g96.t1"; gene_id "g96"; chr2L AUGUSTUS CDS 705862 707766 0.5 - 0 transcript_id "g96.t1"; gene_id "g96"; chr2L AUGUSTUS start_codon 707764 707766 . - 0 transcript_id "g96.t1"; gene_id "g96"; # protein sequence = [MKATLDSVVASETMTRVTFTGNHESKDFAIFHRCRRRSNIKSLYSPPALHPSHMLRSSLLILLAIVLLGSSQAASHDQ # ERERKLEVFEGVAVDYQIGYIGDFGGIDSGPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRETRASYSLVAIPLSGRNIRVLVTVKDENDNAPTFPQ # TSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNI # TIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQP # LETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNY # TLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSH # IDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g96 ### # start gene g97 chr2L AUGUSTUS gene 727916 728182 0.55 + . g97 chr2L AUGUSTUS transcript 727916 728182 0.55 + . g97.t1 chr2L AUGUSTUS start_codon 727916 727918 . + 0 transcript_id "g97.t1"; gene_id "g97"; chr2L AUGUSTUS CDS 727916 728179 0.55 + 0 transcript_id "g97.t1"; gene_id "g97"; chr2L AUGUSTUS stop_codon 728180 728182 . + 0 transcript_id "g97.t1"; gene_id "g97"; # protein sequence = [MGTVSRGKCIHPPVQNSRTAVLGNLHTLVLFVGQPQPMEANRTANGQTPPRMSGLISCTLIYSGKQKARLLLSKISEP # QIADGQAPDK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g97 ### # start gene g98 chr2L AUGUSTUS gene 728562 730454 0.69 + . g98 chr2L AUGUSTUS transcript 728562 730454 0.69 + . g98.t1 chr2L AUGUSTUS start_codon 728562 728564 . + 0 transcript_id "g98.t1"; gene_id "g98"; chr2L AUGUSTUS CDS 728562 730451 0.69 + 0 transcript_id "g98.t1"; gene_id "g98"; chr2L AUGUSTUS stop_codon 730452 730454 . + 0 transcript_id "g98.t1"; gene_id "g98"; # protein sequence = [MYSKDVRFGSGVRAMMIRGVDILADAVAVTMGPKGRSVIVERPWTSPKITKDGFTVARSIALKDQHMNLGAKLVQDVA # DNTNESAGDGTTTATVLARAIAKEGFNQITMGANPVEIRRGVMLAVDVVKDKLKEMSKAVETREEIQQVATLSANGDTEIGRLIGEATDKVGPRGTIT # VKDGKRLKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITGLSQIVKGLEQSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVC # AVKSPSYGHHRKELIGDISAATGATIFGDDINYSKMEEAKLEDLGQVGEAVISKDSTMLLQGKPKTGLLEMRIQQIQDELAEKQIKPEQRDRLRQRLS # ALTKGVAVLHIGGGSEVEVNEKKDRVVDALNATRAAIEEGIVPGGGTAFLRCIPYLQELKTESADLQKGVDIVCNALRMPCQTIAQNAGVDGPMVVAK # VLNGSEDYGYDAMGDEYCRLVEKGIIDPTKVLRTAITDAAGVASLLSTTEVVITDSRNDDLLSKLSGAGGGMDDGLDMNMGGLEELAALSGLGGMGGM # GGMGGMGGMGGMGGGFGGMGAGGGMSASASNDGPTAEEMNEMVKAIPGMEQVEVRDIDSGMM] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g98 ### # start gene g99 chr2L AUGUSTUS gene 738074 740995 0.4 - . g99 chr2L AUGUSTUS transcript 738074 740995 0.4 - . g99.t1 chr2L AUGUSTUS stop_codon 738074 738076 . - 0 transcript_id "g99.t1"; gene_id "g99"; chr2L AUGUSTUS CDS 738077 738268 0.97 - 0 transcript_id "g99.t1"; gene_id "g99"; chr2L AUGUSTUS CDS 738321 738435 1 - 1 transcript_id "g99.t1"; gene_id "g99"; chr2L AUGUSTUS CDS 738508 738837 0.42 - 1 transcript_id "g99.t1"; gene_id "g99"; chr2L AUGUSTUS CDS 739445 740014 0.6 - 1 transcript_id "g99.t1"; gene_id "g99"; chr2L AUGUSTUS CDS 740357 740690 0.97 - 2 transcript_id "g99.t1"; gene_id "g99"; chr2L AUGUSTUS CDS 740800 740995 0.96 - 0 transcript_id "g99.t1"; gene_id "g99"; chr2L AUGUSTUS start_codon 740993 740995 . - 0 transcript_id "g99.t1"; gene_id "g99"; # protein sequence = [MEMEKSGKFSDYLFAKMGPPTSTELPPKTTECSDAPVELTGYRRWLSENLMLLVTLSGVLLGVILGLSLRPLNLHGDS # IMLISYPGELFMRVLKLMILPLVISSLIAGSASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNADDRSTDRRAVNLLDSLLDLG # RNVFPDNLFQASIQQAHTVYLPKPSILHVFNETMNDTLASGSEAQRLSEDLTEDVVLVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFA # AIFEVIMKMVTCVMWLTPVGISSVIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTAFATASTAAALP # ITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFGELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLL # FAVDWFVDRIRTTNNMLGDCYTAAVVEELSRKELMALDAASVNYQDMPAGTPNGHGHGHGHHDGGLLEGQTELETSSKCVMTMTDSVVVDISAVMNNV # NLQQEHCNRRV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g99 ### # start gene g100 chr2L AUGUSTUS gene 743680 760913 0.17 + . g100 chr2L AUGUSTUS transcript 743680 760913 0.17 + . g100.t1 chr2L AUGUSTUS start_codon 743680 743682 . + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 743680 743730 0.17 + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 753056 753730 0.67 + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 754487 754630 1 + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 755021 755296 1 + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 755829 756080 0.97 + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 756668 757030 0.97 + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 757128 757429 1 + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 757800 757938 1 + 1 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 758847 759122 0.98 + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 759231 759549 0.96 + 0 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS CDS 759679 760910 1 + 2 transcript_id "g100.t1"; gene_id "g100"; chr2L AUGUSTUS stop_codon 760911 760913 . + 0 transcript_id "g100.t1"; gene_id "g100"; # protein sequence = [MFAFLCFGLDSRGLDFKPLIADDSNALVINGPLAIADGMRIIQPVQGTRYGPWPAVGLRLVLALAWATSAAAAMESSA # ELQALGYEAIRPGAASISTSSPSSSPPGESASTVTAGGTPIPPRSDWKYKRTKVKRRQQRLNSHSNLPGSTNASHAHHLLNLPPRQRYLKVNQVFESE # RRMSPAEMQRNHGKIVLLGLFELSTSRGPRPDGLSELGAATMAVEHINRKRLLPGYTLELVTNDTQCDPGVGVDRFFHAIYTQPSTRMVMLLGSACSE # VTESLAKVVPYWNIVQVSFGSTSPALSDRREFPYFYRTVAPDSSHNPARIAFIRKFGWGTVTTFSQNEEVHSLAVNNLVTELEAANISCAATITFAAT # DFKEQLLLLRETDTRIIIGSFSQELAPQILCEAYRLRMFGADYAWILHESMGAPWWPDQRTACSNHELQLAVENLIVVSTHNSIVGNNVSYSGLNNHM # FNSQLRKQSAQFHGQDGFGSGYGSRISIAATQSDSRRRRRRGVGGTSGGHLFPEAISQYAPQTYDAVWAIALALRAAEEHWRRNEEQSKLDGFDYTRS # DMAWEFLQQMGKLHFLGVSGPVSFSGPDRVGTTAFYQIQRGLLEPVALYYPATDALDFRCPRCRPVKWHSGQVPIAKRVFKLRVATIAPLAFYTIATL # SSVGIALAIAFLAFNLHFRKLKAIKLSSPKLSNITAVGCIFVYATVILLGLDHSTLPSAEDSFATVCTARVYLLSAGFSLAFGSMFAKTYRVHRIFTR # TGSVFKDKMLQDIQLILLVGGLLLVDALLVTLWVVTDPMERHLHNLTLEISATDRSVVYQPQVEVCRSQHTQTWLSVLYAYKGLLLVVGVYMAWETRH # VKIPALNDSQYIGVSVYSVVITSAIVVVLANLISERVTLAFITITALILTSTTATLCLLFIPKLHDIWARNDIIDPVIHSMGLKMECNTRRFVVDDRR # ELQYRVEVQNRVYKKEIQALDAEIRKLERLLESGLTTTSTTTSSSTSLLTGGGHLKPELTVTSGISQTPAASKNRTPSISGILPNLLLSVLPPVIPRA # SWPSAEYMQIPMRRSVTFASQPQLEEACLPAQDLINLRLAHQQATEAKTGLINRLRGIFSRTTSSNKGSTASLADQKGLKAAFKSHMGLFTRLIPSSQ # TASCNAIYNNPNQDSIPSEASSHPNGNHLKPIHRGSLTKSGTHLDHLTKDPNFLPIPTISGGEQGDQTLGGKYVKLLETKVNFQLPSNRRPSVVQQPP # SLRERVRGSPRFPHRILPPTCSLSALAESEDRPGDSTSILGSCKSIPRISLQQATSGGTWKSMETAGKSRLSLGDSQEEEQQAPANGTE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/11 # CDS introns: 0/10 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 8 # RM: 8 # incompatible hint groups: 0 # end gene g100 ### # start gene g101 chr2L AUGUSTUS gene 772864 773918 0.65 + . g101 chr2L AUGUSTUS transcript 772864 773918 0.65 + . g101.t1 chr2L AUGUSTUS start_codon 772864 772866 . + 0 transcript_id "g101.t1"; gene_id "g101"; chr2L AUGUSTUS CDS 772864 772914 0.65 + 0 transcript_id "g101.t1"; gene_id "g101"; chr2L AUGUSTUS CDS 773571 773915 0.75 + 0 transcript_id "g101.t1"; gene_id "g101"; chr2L AUGUSTUS stop_codon 773916 773918 . + 0 transcript_id "g101.t1"; gene_id "g101"; # protein sequence = [MWELLAVDGAEEKGFGPQSRTAREKMRSFILIALFALIALAAAQGGPQGGQQGGQGGSQNGQQGGQQGGSQEGSQEGS # QEGQQGGQQGGQQQGGPGGPWGLPPNGTELSNSTTTSTTEATSTESSSTEVSSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 2 # RM: 2 # end gene g101 ### # start gene g102 chr2L AUGUSTUS gene 776542 776841 0.99 + . g102 chr2L AUGUSTUS transcript 776542 776841 0.99 + . g102.t1 chr2L AUGUSTUS start_codon 776542 776544 . + 0 transcript_id "g102.t1"; gene_id "g102"; chr2L AUGUSTUS CDS 776542 776838 0.99 + 0 transcript_id "g102.t1"; gene_id "g102"; chr2L AUGUSTUS stop_codon 776839 776841 . + 0 transcript_id "g102.t1"; gene_id "g102"; # protein sequence = [MRSYILIVLFALIALAAAQGGPQGGQQGGQGGPQNGQQGGQQGGSQEGSQGGQQGGQQQGGPGGPWGLPPNGTELSNS # TTTSTTEASTTESSTTDVSSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g102 ### # start gene g103 chr2L AUGUSTUS gene 779894 780145 0.55 - . g103 chr2L AUGUSTUS transcript 779894 780145 0.55 - . g103.t1 chr2L AUGUSTUS stop_codon 779894 779896 . - 0 transcript_id "g103.t1"; gene_id "g103"; chr2L AUGUSTUS CDS 779897 780145 0.55 - 0 transcript_id "g103.t1"; gene_id "g103"; chr2L AUGUSTUS start_codon 780143 780145 . - 0 transcript_id "g103.t1"; gene_id "g103"; # protein sequence = [MRLKELMQRILGFVGSCCCRVPFEGRAYSKCHSSRANLSWPPAVSHQAASANKLHFDFRIPWLAFLPLPFHHRLGLPS # ITGLH] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g103 ### # start gene g104 chr2L AUGUSTUS gene 781276 782483 0.66 + . g104 chr2L AUGUSTUS transcript 781276 782483 0.66 + . g104.t1 chr2L AUGUSTUS start_codon 781276 781278 . + 0 transcript_id "g104.t1"; gene_id "g104"; chr2L AUGUSTUS CDS 781276 782048 0.8 + 0 transcript_id "g104.t1"; gene_id "g104"; chr2L AUGUSTUS CDS 782124 782181 0.88 + 1 transcript_id "g104.t1"; gene_id "g104"; chr2L AUGUSTUS CDS 782238 782480 0.71 + 0 transcript_id "g104.t1"; gene_id "g104"; chr2L AUGUSTUS stop_codon 782481 782483 . + 0 transcript_id "g104.t1"; gene_id "g104"; # protein sequence = [MTFLDRTMSFWAVSRGLTPPSKVVPMLNPNQRQFLEDEVRYREKLKLMARGDAMEEVYVRKQETVDDPLELDKHDSFY # QTTKSLLVLFQIMGVMPIHRNPPEKNLPRTGYSWGSKQVMWAIFIYSCQTTIVVLVLRERVKKFVTSPDKRFDEAIYNVIFISLLFTNFLLPVASWRH # GPQVAIFKNMWTNYQYKFFKTTGSPIVFPNLYPLTWSLCVFSWLLSIAINLSQYFLQPDFRLWYTFAYYPIIAMLNCFCSLWYINCNAFGTASRALSD # ALQTTIRGEKPAQKLTEYRHLWVDLSHMMQQLGRAYSNMYGMYCLVIFFTTIIATYGSISEIIDHGATYKEVRLLATQGITHID] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g104 ### # start gene g105 chr2L AUGUSTUS gene 782525 782824 0.72 + . g105 chr2L AUGUSTUS transcript 782525 782824 0.72 + . g105.t1 chr2L AUGUSTUS start_codon 782525 782527 . + 0 transcript_id "g105.t1"; gene_id "g105"; chr2L AUGUSTUS CDS 782525 782821 0.72 + 0 transcript_id "g105.t1"; gene_id "g105"; chr2L AUGUSTUS stop_codon 782822 782824 . + 0 transcript_id "g105.t1"; gene_id "g105"; # protein sequence = [MGLLYIICNEAHYASRKVGLDFQTKLLNINLTAVDAATQKEVEMLLVAINKNPPIMNLDGYANINRELITTNISFMAT # YLVVLLQFKITEQRRIGQQQA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g105 ### # start gene g106 chr2L AUGUSTUS gene 784421 786139 1 + . g106 chr2L AUGUSTUS transcript 784421 786139 1 + . g106.t1 chr2L AUGUSTUS start_codon 784421 784423 . + 0 transcript_id "g106.t1"; gene_id "g106"; chr2L AUGUSTUS CDS 784421 786136 1 + 0 transcript_id "g106.t1"; gene_id "g106"; chr2L AUGUSTUS stop_codon 786137 786139 . + 0 transcript_id "g106.t1"; gene_id "g106"; # protein sequence = [MCHRIKQDYSGNSYLGLHLGTQLFRALILDSKLNVTYVAQIRYDVDLPEFKTTNGILSDGGPGEFLANPVMWVKALDM # LMDCLVKQGADMHTVVSIAGAAQQHGCVFWSELGLRRLCNLNVNLRLHEQITESAFELTRTPTWRDSSTDVQVREMEHTVGGPAELSKITGSRAYTRF # TGPQIRKVYTQCPEQYERTSRISLISSFLASLLIGGIASIDYSDGSGMNLLDIRKKKWSAACLDACAPDLARRLMKPIPSSRLQGRIGDYYVKRWNFR # PDCMVVASTGSKASELAGLLVENDFLMLSLDTSDVVVMPLKKAPRLEDGHVMCHPTRRDEYMGLLCFQNGGLTRKAICEDVAGGSWRHFYEMLDATPS # GNNGNVAVHFRDREIIPTAKGTLRWDAHISPMSAECIRGLHRFSTPEIEVRALIEGQIMHHWSIAHEMGFHHTPNTKIIVVGEDSRCQSVLQIVADIF # NAPVYQRTGVEVSLLGCAFRARYAFYEHRESACNCHSCMMPTGRRTRLSFDEFFRDVPSGLKLAAEPTPGCDKIYKPLIERCSQICQLLASKSSVYFF # HPNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g106 ### # start gene g107 chr2L AUGUSTUS gene 786260 790629 0.98 - . g107 chr2L AUGUSTUS transcript 786260 790629 0.98 - . g107.t1 chr2L AUGUSTUS stop_codon 786260 786262 . - 0 transcript_id "g107.t1"; gene_id "g107"; chr2L AUGUSTUS CDS 786263 786422 1 - 1 transcript_id "g107.t1"; gene_id "g107"; chr2L AUGUSTUS CDS 786479 786664 0.99 - 1 transcript_id "g107.t1"; gene_id "g107"; chr2L AUGUSTUS CDS 786733 788178 1 - 1 transcript_id "g107.t1"; gene_id "g107"; chr2L AUGUSTUS CDS 788242 788612 1 - 0 transcript_id "g107.t1"; gene_id "g107"; chr2L AUGUSTUS CDS 790489 790629 0.99 - 0 transcript_id "g107.t1"; gene_id "g107"; chr2L AUGUSTUS start_codon 790627 790629 . - 0 transcript_id "g107.t1"; gene_id "g107"; # protein sequence = [MAAGMLTDREREAIVSNLTKDVQALREMVRSRESELVKLHREIHKLKSVLQQTTNNLNVTRNEKAKKKLYSLPEQCGE # QESRNQNPHLCSSCGMVLPTSPEFALEALSLGPLSPLASTSSASPSGRTSADEVRPKAMPAAIKKQGVSAESCVQSMQQSYSIPIPKYEKDFSDKQQI # KDAIMDNDFLKNIDASQVRELVDSMYSKSIAAGEFVIREGEVGAHLYVSAAGEFAVMQQGKVLDKMGAGKAFGELAILYNCTRTASIRVLSEAARVWV # LDRRVFQQIMMCTGLQRIENSVNFLRSVPLLMNLSEELLAKIADVLELEFYAAGTYIIRQGTAGDSFFLISQGNVRVTQKLTPTSPEETELRTLSRGD # YFGEQALINEDKRTANIIALSPGVECLTLDRDSFKRLIGDLCELKEKDYGDESRKLAMKQAQESCRDEPKEQLQQEFPDLKLTDLEVVSTLGIGGFGR # VELVKAHHQDRVDIFALKCLKKRHIVDTKQEEHIFSERHIMLSSRSPFICRLYRTFRDEKYVYMLLEACMGGEIWTMLRDRGSFEDNAAQFIIGCVLQ # AFEYLHARGIIYRDLKPENLMLDERGYVKIVDFGFAKQIGTSSKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIHELLNGTPPFSAPDPMQTYN # LILKGIDMIAFPKHISRWAVQLIKRLCRDVPSERLGYQTGGIQDIKKHKWFLGFDWDGLASQLLIPPFVRPIAHPTDVRYFDRFPCDLNEPPDELSGW # DADF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 3 # RM: 3 # incompatible hint groups: 0 # end gene g107 ### # start gene g108 chr2L AUGUSTUS gene 799201 804515 0.31 - . g108 chr2L AUGUSTUS transcript 799201 804515 0.31 - . g108.t1 chr2L AUGUSTUS stop_codon 799201 799203 . - 0 transcript_id "g108.t1"; gene_id "g108"; chr2L AUGUSTUS CDS 799204 799338 0.48 - 0 transcript_id "g108.t1"; gene_id "g108"; chr2L AUGUSTUS CDS 804414 804515 0.4 - 0 transcript_id "g108.t1"; gene_id "g108"; chr2L AUGUSTUS start_codon 804513 804515 . - 0 transcript_id "g108.t1"; gene_id "g108"; # protein sequence = [LDKQYSTAPGSPIYLHPKPISTSRFRFHGYYPTTAQCSTSTASTFKAHRHSGRWHDGFEDEVLVKGPGLALSVRMLFE # L] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 2 # RM: 2 # incompatible hint groups: 0 # end gene g108 ### # start gene g109 chr2L AUGUSTUS gene 810646 813311 0.64 + . g109 chr2L AUGUSTUS transcript 810646 813311 0.64 + . g109.t1 chr2L AUGUSTUS start_codon 810646 810648 . + 0 transcript_id "g109.t1"; gene_id "g109"; chr2L AUGUSTUS CDS 810646 810758 0.84 + 0 transcript_id "g109.t1"; gene_id "g109"; chr2L AUGUSTUS CDS 810809 811021 0.98 + 1 transcript_id "g109.t1"; gene_id "g109"; chr2L AUGUSTUS CDS 811635 812496 0.79 + 1 transcript_id "g109.t1"; gene_id "g109"; chr2L AUGUSTUS CDS 812562 813308 1 + 0 transcript_id "g109.t1"; gene_id "g109"; chr2L AUGUSTUS stop_codon 813309 813311 . + 0 transcript_id "g109.t1"; gene_id "g109"; # protein sequence = [MNNIEEDTEAAFKRLQAVIPQVKQAYEEAIGQIFSDLNSSDLESCASILEEHESTSLDTEQIIHSTRRLMTKIVLDVN # QCFFSGNDVETKLTTLEMLKEQFAAHEGKNCMLNLSVVLRVQSSRHVASYATAAAAAVKTKPPKAKSKGKKQKGEPLISCRRSQFDLTQYEQTDAKFG # SLSLASKGWLHNKSKGDFFILNASVRGEELQQEMQTVDEFLESTGMQIHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAETGCGKTITYLL # PIVDKLLQKEVVTERKLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKVQSLLGGNTKQLMMNPQFEEVDILVATLGALSKLVTTGIYRMEQVRHLV # LDEADTLLDDTFTDKLSYFLRRFPFHLVQKEDAGTQMILASATMPTNTREILHKVIDVDTIREVVSPHLHRLMSHVTQKFLRLSKADRPATLLSLVKH # DLAKRRPLIVFSNKSTTSDFVSIFLNNSGVNCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGR # VGNMDKALVTNLISSRREIDVVQRIEHAARTGGLLPDVNANIRNIINKRIVAEMKAAGMPVPALGSLNGHTPQEEAF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/4 # CDS introns: 0/3 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 0 # end gene g109 ### # start gene g110 chr2L AUGUSTUS gene 813457 815831 0.19 - . g110 chr2L AUGUSTUS transcript 813457 815831 0.19 - . g110.t1 chr2L AUGUSTUS stop_codon 813457 813459 . - 0 transcript_id "g110.t1"; gene_id "g110"; chr2L AUGUSTUS CDS 813460 813893 0.6 - 2 transcript_id "g110.t1"; gene_id "g110"; chr2L AUGUSTUS CDS 813951 814136 0.54 - 2 transcript_id "g110.t1"; gene_id "g110"; chr2L AUGUSTUS CDS 814243 815221 1 - 0 transcript_id "g110.t1"; gene_id "g110"; chr2L AUGUSTUS CDS 815275 815421 0.44 - 0 transcript_id "g110.t1"; gene_id "g110"; chr2L AUGUSTUS CDS 815475 815831 0.98 - 0 transcript_id "g110.t1"; gene_id "g110"; chr2L AUGUSTUS start_codon 815829 815831 . - 0 transcript_id "g110.t1"; gene_id "g110"; # protein sequence = [MKTSGASNTDELNKSSHSKVSKKSTKSRSKSAKLELTGKNSLSASASSSIASAVSGGVAVGSLPATPTHLNMVTTPTT # PTSSLGNYNLFDASFAVAGSGGHGLAGGIAGAEASGNSSRMGHQKSYAGFDPRSIKIFWEQHDQTDVELSQDVCARLAEDASYKVWELINNVKIYSRH # SGGVVTYDLVNEVLKDADVPPMLGAMDSDWDRIDYDGSFYFHSDKIFELSAEFQKEVNLCTPDDADFQSICPVEDKHMDQLRQCVQSLVTAALFADSK # SQTAAVCHAFQTPLMGSIYRVIVSKMVQLLAFKQQDHLSQRCWRLLRACNYNATANHNACRPEYFNLAEVLVSQLMAPYETIKAPHVDPDPGQTTSIK # MEFEEELKVEPDQCHNPETQENPEVMGVEKQEQEPQMFPGESTMEHTIYKLQSEEEELNPQPEAEHLSSYFACPVGNGLVDELCETIGQLASQSGYLH # AECLFLIKRRLARFFEGRHVSSEREYAFREFIPYIYKLRVEEIPDSLWPDLAPAAIFLGGHDDVYLYEWLEYGCGAALQPFLVHYARAYEKMVTRRYV # KAKQPAYRIESVPGVRRLEWSTLAAAMCHGDDPSKALKPKPTLCEAFPDLQSPNLQLNCAGNIRFKFAGCRPVLLKPKVATVPHSEDSPSSAANGGGG # GGASSDILIAKRKLFKPLTNVRKWSPISGYHYLRI] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g110 ### # start gene g111 chr2L AUGUSTUS gene 816083 816976 1 + . g111 chr2L AUGUSTUS transcript 816083 816976 1 + . g111.t1 chr2L AUGUSTUS start_codon 816083 816085 . + 0 transcript_id "g111.t1"; gene_id "g111"; chr2L AUGUSTUS CDS 816083 816973 1 + 0 transcript_id "g111.t1"; gene_id "g111"; chr2L AUGUSTUS stop_codon 816974 816976 . + 0 transcript_id "g111.t1"; gene_id "g111"; # protein sequence = [MAEAANVRQNLQNVPSIFEISASETLDNLIYPALSKIFDYFGLRLDFKLWGSLRIQEELSPLLTWLLQYLYLRKRASS # FGESFYGLQRTVTTTGDLLNRRQQFASATLLTFMPYVERKLRTRITRHEDTSPWEQRLLSAFHAFHAAKAAHTFFYLVKYASNHSPIFRLLGLTLRYP # SEPPKEDQWTYVVLKMLEVLAFFLQFVQWWYSNDQRRKVGGTLINPEAMPRKQLPKEVQQSLPQRGECPVCLLSIQTPTACSVSGYVFCWKCIVSHMK # EHGTCPVTHYPISLDDLVRIYET] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g111 ### # start gene g112 chr2L AUGUSTUS gene 817236 817898 0.69 - . g112 chr2L AUGUSTUS transcript 817236 817898 0.69 - . g112.t1 chr2L AUGUSTUS stop_codon 817236 817238 . - 0 transcript_id "g112.t1"; gene_id "g112"; chr2L AUGUSTUS CDS 817239 817898 0.69 - 0 transcript_id "g112.t1"; gene_id "g112"; chr2L AUGUSTUS start_codon 817896 817898 . - 0 transcript_id "g112.t1"; gene_id "g112"; # protein sequence = [MLHFVEDQAKLLPSSIKDLQARRHFRIPVGPILALGLLQLPVCMVYNLVMAITTDFQSTTYTTCNAFNIFPSTSAAAK # SQHKVWALACYLEFPFLIASAWLQFRFYRRNLRRPVRGFGCLMAIIMAVSSSSVLLWGTFPQEDGDSLLHITIALSLFVSCAIYMAGSFVCAKYYMSD # RIGQLHEEFSLRLKSGLVLTYYVWVVVMWIFYFIHQKFCFPLGE] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g112 ### # start gene g113 chr2L AUGUSTUS gene 818507 819334 0.95 - . g113 chr2L AUGUSTUS transcript 818507 819334 0.95 - . g113.t1 chr2L AUGUSTUS stop_codon 818507 818509 . - 0 transcript_id "g113.t1"; gene_id "g113"; chr2L AUGUSTUS CDS 818510 819334 0.95 - 0 transcript_id "g113.t1"; gene_id "g113"; chr2L AUGUSTUS start_codon 819332 819334 . - 0 transcript_id "g113.t1"; gene_id "g113"; # protein sequence = [MLPTYERFSDPKSVLFRLPFARLALVALSLPLGGFFFCVIWSLTFDFVRSTYTHCDVTNYLPSVSAAIGNYEPQKTVW # RLAIFLHLPLRLAVAKIYLEHYREHIRRSRRLLGILACFLNVVEDLALFCLSFWTSADHYETHRNAFVVFIACSECYMLVSYLLNRNIQKTVLLPHEE # KSLRYKRNLFLVNVIAFGLAGYCFVRHNSHCEAGGEWESVVSPLLSYNESFLSTVYTFFALFEYIVVLTNMGFHMTSYWDFYALNVVCDAKHGLYLSQ # S] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g113 ### # start gene g114 chr2L AUGUSTUS gene 820079 820969 1 + . g114 chr2L AUGUSTUS transcript 820079 820969 1 + . g114.t1 chr2L AUGUSTUS start_codon 820079 820081 . + 0 transcript_id "g114.t1"; gene_id "g114"; chr2L AUGUSTUS CDS 820079 820966 1 + 0 transcript_id "g114.t1"; gene_id "g114"; chr2L AUGUSTUS stop_codon 820967 820969 . + 0 transcript_id "g114.t1"; gene_id "g114"; # protein sequence = [MDILLANVSGLQFKAERDLIEQVGAIPLPFYGMDKSIAAVCNFITRNGQECDKGSACPFRHIRGDRTIVCKHWLRGLC # KKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMDYLAGFCPEGPSCKHMHPHFELPPL # AELGKDQLHKKLPTCHYCGELGHKANSCKQYVGSLEHRNNINAMDHSGGHSGGYSGHSGHIEGADDMQSNHHSQPHGPGFVKVPTPLEEITCYKCGNK # GHYANKCPKGHLAFLSNQHSHK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g114 ### # start gene g115 chr2L AUGUSTUS gene 821552 823776 0.51 + . g115 chr2L AUGUSTUS transcript 821552 823776 0.51 + . g115.t1 chr2L AUGUSTUS start_codon 821552 821554 . + 0 transcript_id "g115.t1"; gene_id "g115"; chr2L AUGUSTUS CDS 821552 822031 0.51 + 0 transcript_id "g115.t1"; gene_id "g115"; chr2L AUGUSTUS CDS 822858 823569 0.6 + 0 transcript_id "g115.t1"; gene_id "g115"; chr2L AUGUSTUS CDS 823637 823773 1 + 2 transcript_id "g115.t1"; gene_id "g115"; chr2L AUGUSTUS stop_codon 823774 823776 . + 0 transcript_id "g115.t1"; gene_id "g115"; # protein sequence = [MTILGKLRGQPTDQEKVPLPMNLNDEALMHHGSLIAVSFAWHRICGMCPYFCAIVLCPCPSLAPCPPPCPSSCGPRAT # SLVMGGWLVLIPIRNPFRITASAAAARHRFFPDQAPHSLVSLWPVLPLTPLPACNPCSTPSDVCPFTFLGFPRQGLARSLPEPKVAYSDNEADAESMV # FNRPQHHCIKSFLLFLIAVVVMLLGVLGGWTLYRVYAPSHSSMRYHALCEIPYPEDSMEMARVYPRTVEPFALNWRSLLPELAQPMPNSGSLDESHFR # EDIELDGDSDDEGYARVDVPDFKDGRRGRFMHDFKENQSAIIDTTTGRCFIMPLDRDTTLPPTSFVDLIKKMSTGYYNIDTERVRRQMRVVMPRITDV # SLISERIANECFDMKVYMMEKFVSGVSKRSADPLPESAKYAEFMGKGVIEYDLANIAEVEAYEANEARQQA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g115 ### # start gene g116 chr2L AUGUSTUS gene 824433 825836 0.52 - . g116 chr2L AUGUSTUS transcript 824433 825836 0.52 - . g116.t1 chr2L AUGUSTUS stop_codon 824433 824435 . - 0 transcript_id "g116.t1"; gene_id "g116"; chr2L AUGUSTUS CDS 824436 825836 0.52 - 0 transcript_id "g116.t1"; gene_id "g116"; chr2L AUGUSTUS start_codon 825834 825836 . - 0 transcript_id "g116.t1"; gene_id "g116"; # protein sequence = [MILDYMVGLTRNTMLKTRGIVLGISRSYTAKAKRGVLAQDKSKIKEYSPKTTDSHEHRVYVWGFQETGALGLQTNVKK # AKERYTEMVHHPTRLQFSNNNEITDVAAGYGFTVYAVNRDDGETLFGSGLNTDSQLGFQVKGNPNDPANLDVIIYPTAIKLPRVQGETDEDMRVKSMS # AGRAHLVVLTQNGTIFTLGNNSYGQCGRSIIEEERYSKSALIHRISQEDICGKEDEVVQVECGQDHSMFLTKKGRIYTCGWGADGQTGQGNYHTAGQI # TLIGGDVEKEKIVRLSCSSDCVLALNEAGDAFGWGNSEYGQLDDSELAETQINIPRALKLTKSIGKIKDVAAGGSFCMALNDQGLVYTWGFGILGFGP # FVEQTSKPQHLLPPLFGRNDFSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFPFKAAINGKVTKVAYGVDHTIALCKPFF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g116 ### # start gene g117 chr2L AUGUSTUS gene 829536 831923 0.63 + . g117 chr2L AUGUSTUS transcript 829536 831923 0.63 + . g117.t1 chr2L AUGUSTUS start_codon 829536 829538 . + 0 transcript_id "g117.t1"; gene_id "g117"; chr2L AUGUSTUS CDS 829536 829971 0.63 + 0 transcript_id "g117.t1"; gene_id "g117"; chr2L AUGUSTUS CDS 830145 830349 1 + 2 transcript_id "g117.t1"; gene_id "g117"; chr2L AUGUSTUS CDS 830738 831083 1 + 1 transcript_id "g117.t1"; gene_id "g117"; chr2L AUGUSTUS CDS 831177 831626 1 + 0 transcript_id "g117.t1"; gene_id "g117"; chr2L AUGUSTUS CDS 831714 831920 1 + 0 transcript_id "g117.t1"; gene_id "g117"; chr2L AUGUSTUS stop_codon 831921 831923 . + 0 transcript_id "g117.t1"; gene_id "g117"; # protein sequence = [MLEHPQRFVRNIPDSSASSQQYPQQQQHPPQLPQHQNLNLNQNQNLNQNQIYQYRPQVPVPVPGSPAHHQRHSSLSQQ # QQLHHHRTLSTASSCSAQHKSVTFGQPALDCGGNGSGSANGSGSGNSSSGSAAGNAGTQSMAGNMKHGKSQDDVCYVVAKYDYAAQGAQELDLRKNER # YLLLDDSKHWWRVQNSRNQSGYVPSNYVKKEKPSLFDSIKKKVKKGSGSKTLPNCSPSRQVESPTMSRRLPPDPAEAIGTAVVKYNYQAQQPDELSLT # KGTRILILEKSNDGWWRGQSGNSVGWFPSNYTTEDCDNDGEIHTYAMAENVLDIVVALYSFTSNNDQELSFEKGDRLEIVDRPASDPDWYKARNNQGQ # VGLVPRNYLQELNDYLATPYRNASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIERPNLAGKSWYYGAITRSQCDTVLNGHGHDGD # FLIRDSETNMGDYSVSLKAPGRNKHFRVHVEQNMYCIGQRKFHSLDQLVDHYQRAPIYTNKQGEKLYLVRSLPKANGT] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 2 # RM: 2 # end gene g117 ### # start gene g118 chr2L AUGUSTUS gene 834944 850287 0.26 - . g118 chr2L AUGUSTUS transcript 834944 850287 0.26 - . g118.t1 chr2L AUGUSTUS stop_codon 834944 834946 . - 0 transcript_id "g118.t1"; gene_id "g118"; chr2L AUGUSTUS CDS 834947 835290 0.82 - 2 transcript_id "g118.t1"; gene_id "g118"; chr2L AUGUSTUS CDS 835353 835547 1 - 2 transcript_id "g118.t1"; gene_id "g118"; chr2L AUGUSTUS CDS 835704 836171 0.96 - 2 transcript_id "g118.t1"; gene_id "g118"; chr2L AUGUSTUS CDS 836546 837378 1 - 1 transcript_id "g118.t1"; gene_id "g118"; chr2L AUGUSTUS CDS 849899 850287 0.56 - 0 transcript_id "g118.t1"; gene_id "g118"; chr2L AUGUSTUS start_codon 850285 850287 . - 0 transcript_id "g118.t1"; gene_id "g118"; # protein sequence = [LPSDTEQLAGSDEDRAQSHEAEAEESEEERAGSGPSVRPLIAAAGATTTTTSTSVVPEAVQRAAAKGATETATMAVVR # KKQDDKYLLALRELVASGTGSNRQCFDCGQKGPTYVNMTIGSFVCTRCSGVLRGLTPPHRVKSISMATFTQDEIDFLRSHGNELCAKTWLGLWDPKRA # VHQQEQRELMMDKYERKRYYLEPASPLKSLANAVNLKSSAPATNHTQNGHQNGYASIHLTPPAAQRTSANGLQKVANSSSNSSGKTSSSISRPHYNHQ # NNSQNNNHDAFGLGGGLSSLNSAGSTSTGALSDTSSCASNGFGADCDFVADFGSANIFDATSARSTGSPAVSSVSSVGSSNGYAKVQPIRAAHLQQQQ # QLQQQLHQQQLLNGNGHQGTENFADFDHAPIYNAVAPPTFNDWISDWSRRGFHDPFDDCDDSPPGARPPAPAPAPAQVPAVSSPLPTVREEPELAWNF # WEDEMRIEAQEKESQTKQPELGYSFSISTTTPLSPSNPFLPYLVSEEQHRNHPEKPSFSYSLFSSISNSSQEDQADDHEMNVLNANFHDFFTWSAPLQ # NGHTTSPPKGGNAAMAPSEDRYAALKDLDEQLRELKASESATETPTPTSGNVQATDAFGGALNNNPNPFKGQQQQQLSSHVVNPFQQQQQQQHQQNLY # GQLTLIPNAYGSSSQQQMGHHLLQQQQQQQQSFFNFNNNGFAISQGLPNGCGFGSMQPAPVMANNPFAVSMRTDPLD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 14 # RM: 14 # incompatible hint groups: 3 # RM: 3 # end gene g118 ### # start gene g119 chr2L AUGUSTUS gene 851443 852406 0.8 - . g119 chr2L AUGUSTUS transcript 851443 852406 0.8 - . g119.t1 chr2L AUGUSTUS stop_codon 851443 851445 . - 0 transcript_id "g119.t1"; gene_id "g119"; chr2L AUGUSTUS CDS 851446 851659 0.88 - 1 transcript_id "g119.t1"; gene_id "g119"; chr2L AUGUSTUS CDS 851739 852406 0.85 - 0 transcript_id "g119.t1"; gene_id "g119"; chr2L AUGUSTUS start_codon 852404 852406 . - 0 transcript_id "g119.t1"; gene_id "g119"; # protein sequence = [MNVAKRITDISRNSEKSERERQKMDAEIRKMEEAAMKSYAQDVHSRGDMTARSINTVMRATATAAASGGAHSFAGRSR # QVDPMRLEGLSDEEEDQRRVAPGKVTSDAAVPEASLWVEGKSDEGHTYYWNVKTNESVWKPPKEGYLSYEEYERINQLAIDQQQISQAEESLKFRANV # DEEVARVNREKMKAFRRTDNPKEKKQKEERRQTFKTEEEAATKEIGQAPEQPIDWQLPKTDYYSAAPVVSASSEPEPPVKKFKEKTIGGLDEEIAATA # PATFKRKFIRKGNSRQRAED] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g119 ### # start gene g120 chr2L AUGUSTUS gene 852936 854383 0.99 + . g120 chr2L AUGUSTUS transcript 852936 854383 0.99 + . g120.t1 chr2L AUGUSTUS start_codon 852936 852938 . + 0 transcript_id "g120.t1"; gene_id "g120"; chr2L AUGUSTUS CDS 852936 853005 0.99 + 0 transcript_id "g120.t1"; gene_id "g120"; chr2L AUGUSTUS CDS 853192 853278 0.99 + 2 transcript_id "g120.t1"; gene_id "g120"; chr2L AUGUSTUS CDS 853545 854380 1 + 2 transcript_id "g120.t1"; gene_id "g120"; chr2L AUGUSTUS stop_codon 854381 854383 . + 0 transcript_id "g120.t1"; gene_id "g120"; # protein sequence = [MGQTRVAATTAAQSPAAELSPETNGQTEEPLQLLGEDSWEEFSIAVPWGTVEAKWWGSKERQPIIALHGWQDNCGSFD # RLCPLLPADTSILAIDLPGHGKSSHYPMGMQYFIFWDGICLIRRIVRKYNWKNVTLLGHSLGGALTFMYAASFPTEVEKLINIDIAGPTVRGTQRMAE # GTGRALDKFLDYETLPESKQPCYSYDEMIKLVLDAYDGSVDEPSVRVLMNRGMRHNPSKNGYLFARDLRLKVSLLGMFTAEQTLAYARQIRCRVLNIR # GIPGMKFETPQVYADVIATLRENAAKVVYVEVPGTHHLHLVTPDRVAPHIIRFLKEA] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g120 ### # start gene g121 chr2L AUGUSTUS gene 855550 856107 0.86 + . g121 chr2L AUGUSTUS transcript 855550 856107 0.86 + . g121.t1 chr2L AUGUSTUS start_codon 855550 855552 . + 0 transcript_id "g121.t1"; gene_id "g121"; chr2L AUGUSTUS CDS 855550 855623 1 + 0 transcript_id "g121.t1"; gene_id "g121"; chr2L AUGUSTUS CDS 855687 855810 0.86 + 1 transcript_id "g121.t1"; gene_id "g121"; chr2L AUGUSTUS CDS 855868 856104 0.86 + 0 transcript_id "g121.t1"; gene_id "g121"; chr2L AUGUSTUS stop_codon 856105 856107 . + 0 transcript_id "g121.t1"; gene_id "g121"; # protein sequence = [MDLIKEINDKYMALEAEIDQKLEKVQAEELKLERQNEQLAESSICAPAPKVLSYEEALLRNTNTLKALEIAKARLRSR # STYSPVEKLLQQALQNYRRELESLQDAEDRGKDPKNPDNQEEEGEEENLYDLVMQNVMEAKRQQTDL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g121 ### # start gene g122 chr2L AUGUSTUS gene 857842 858075 0.86 - . g122 chr2L AUGUSTUS transcript 857842 858075 0.86 - . g122.t1 chr2L AUGUSTUS stop_codon 857842 857844 . - 0 transcript_id "g122.t1"; gene_id "g122"; chr2L AUGUSTUS CDS 857845 858075 0.86 - 0 transcript_id "g122.t1"; gene_id "g122"; chr2L AUGUSTUS start_codon 858073 858075 . - 0 transcript_id "g122.t1"; gene_id "g122"; # protein sequence = [MGLRPRATVPAHQVEYPIPSPSPSRRAVLHSDSDSESESESDSETQTEAEYGGGFNQPASAIWERSESRRFSVSVPG] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g122 ### # start gene g123 chr2L AUGUSTUS gene 859147 861696 0.25 + . g123 chr2L AUGUSTUS transcript 859147 861696 0.25 + . g123.t1 chr2L AUGUSTUS start_codon 859147 859149 . + 0 transcript_id "g123.t1"; gene_id "g123"; chr2L AUGUSTUS CDS 859147 859217 0.25 + 0 transcript_id "g123.t1"; gene_id "g123"; chr2L AUGUSTUS CDS 860764 861357 0.6 + 1 transcript_id "g123.t1"; gene_id "g123"; chr2L AUGUSTUS CDS 861429 861693 1 + 1 transcript_id "g123.t1"; gene_id "g123"; chr2L AUGUSTUS stop_codon 861694 861696 . + 0 transcript_id "g123.t1"; gene_id "g123"; # protein sequence = [MSLVWTWTKAKGVDGDRTSANMPRISLDLTDNVNAQNESETVFLKIEANFREGQIIRSMFQPGGGWQQEEISKNWKCD # GPKNPLQPGQSFTFRVAVLQRCFEIYVNDQLYGSFEFVKFPKQINYVRTYGDFEKITQFHHRMLFPLVFPRTLMCPDKVAFQSDVPRRYETGTVVAME # CIAKGPPTTEFSICFQCNDTGRTVLRFHVNFDRTTVSRSYQREDNSFALSDEETEGEFPFVRGKLFKIAFGLGDRAFLIAVNGQYFTYYNFPGRPFSI # STLKCFTNEVGDFAVRSLEYHSDSPLLARVEKLSII] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g123 ### # start gene g124 chr2L AUGUSTUS gene 862166 864745 0.35 - . g124 chr2L AUGUSTUS transcript 862166 864745 0.35 - . g124.t1 chr2L AUGUSTUS stop_codon 862166 862168 . - 0 transcript_id "g124.t1"; gene_id "g124"; chr2L AUGUSTUS CDS 862169 862258 0.95 - 0 transcript_id "g124.t1"; gene_id "g124"; chr2L AUGUSTUS CDS 862319 862498 1 - 0 transcript_id "g124.t1"; gene_id "g124"; chr2L AUGUSTUS CDS 862563 864134 0.97 - 0 transcript_id "g124.t1"; gene_id "g124"; chr2L AUGUSTUS CDS 864195 864302 0.53 - 0 transcript_id "g124.t1"; gene_id "g124"; chr2L AUGUSTUS CDS 864398 864745 0.69 - 0 transcript_id "g124.t1"; gene_id "g124"; chr2L AUGUSTUS start_codon 864743 864745 . - 0 transcript_id "g124.t1"; gene_id "g124"; # protein sequence = [MVNHHSNGGGSAGNSSGSLRGGGAHGGGGGGGDYSGDDRSGGGEERERLESDLHDKPTYLLEHLATFTVNKESGIVYP # ADGMRRLLQLEKTTGIWSQKMQLCLDYQWVLIMDYETGEPTAFTSNDAMELYNNILVFIVSGGGGSRSEMHIFQSQSVSAVHLVEDLKQLRSGKMITQ # QRGATPTQSGGGGASSMAMMMSKTSSSSSHSRVELHQHREQRAERERERDRDRERESHHHMHQRSSMEQYGIRAGVGVSGDDVAHISGETDSEHGGIG # GGGATERDETSSTSSEKYERDVAVLNHCFDDIEKFIARLQHAAAASRELERRRRNRKSKKRDPGEGLLTLRTRPPHEKEFVDIFAKFKLSFNLLAKLK # AHIHDPNAPELVHFLFTPLALIVEASSDTYYESQLPARVVNPLLTREAINLLINCVTSKETELWRSLGDAWVIPRDQWKDDVGSYHPVFLDGWSPDYL # INDELEPPPNSPPAHVSKRRLEVQAGSGLNGRGGGGYDDYDSGNGMNMAMGIEKYTIHHGNDGLRERERERDRERAGAISASDFNARSELSFDSIEGR # GGGAAGHGHGHGHGPGAGPTLSAITAGLQNLHTRESRSGNGYGAGAGPGPSSELGGGGRGLPNVSDDQMLESWLEDLQATGAKIVLVTYPRTANNDKE # LSVMRGEYLEILDDTRKWWKARNMRGQVAHVPHTIVTPFNFGDGDGAQFYGQQQQPPTGPTGPGNKSRSGDNPGMEQRSPDPTDMMRSKHLGKKGEFR # YF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/5 # CDS introns: 0/4 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 1 # RM: 1 # end gene g124 ### # start gene g125 chr2L AUGUSTUS gene 868739 869776 1 - . g125 chr2L AUGUSTUS transcript 868739 869776 1 - . g125.t1 chr2L AUGUSTUS stop_codon 868739 868741 . - 0 transcript_id "g125.t1"; gene_id "g125"; chr2L AUGUSTUS CDS 868742 869776 1 - 0 transcript_id "g125.t1"; gene_id "g125"; chr2L AUGUSTUS start_codon 869774 869776 . - 0 transcript_id "g125.t1"; gene_id "g125"; # protein sequence = [MSESEAEETKISTEPVDNAWSMKIPAFRQEDNPHGMVEESSFATLFPKYRERYLKEVWPLVEQCLAEHHLKAELDLME # GSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALG # PYKGLQQVRDIVLETMNNVHPIYNIKALMIKRELMKDPRLANEDWSRFLPKFKNKNISKRKQPKVKKQKKEYTPFPPSQPESKVDKQLASGEYFLNQE # QKQAKRNQERTEKQKEAAKRQDERRNKDFVPPTEESAASSRKKEDGSSSSKVDVKALKAKLIKANKKARSS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g125 ### # start gene g126 chr2L AUGUSTUS gene 871897 876737 0.86 + . g126 chr2L AUGUSTUS transcript 871897 876737 0.86 + . g126.t1 chr2L AUGUSTUS start_codon 871897 871899 . + 0 transcript_id "g126.t1"; gene_id "g126"; chr2L AUGUSTUS CDS 871897 872080 0.96 + 0 transcript_id "g126.t1"; gene_id "g126"; chr2L AUGUSTUS CDS 872208 873539 0.98 + 2 transcript_id "g126.t1"; gene_id "g126"; chr2L AUGUSTUS CDS 875038 876734 0.89 + 2 transcript_id "g126.t1"; gene_id "g126"; chr2L AUGUSTUS stop_codon 876735 876737 . + 0 transcript_id "g126.t1"; gene_id "g126"; # protein sequence = [MAVGGWSLVYTWLNDAIRAMNWPLVQEILELLLLSPVDVNRLKINSAPILVKGLCKDGGNEGVRILAKRLVEQWLKIV # TENTSMTIQGAAPHIAATTASQVPASVSGAGSASVPDSASSSDSTDSAGAPVTYTITSAANSSNSNSITIKWKPLLDNPDGGDETDSGTQSKDNEVEH # LEKGSSATHLLADASLGKKSGLDDSSSAAEVKSGEDVDNKKHKSSKSDKSKRSEKEREKDRKKESSSHRSSSSSHKSSSSSSSSSSKSSSSKSSSSSS # SSHRSSSDKYRDKDKARSSSGSSSSSKDRERSSGSSSSSSNKHKSSKSSSSSSSSSSSSSGSSSSKDRKSSSSTSSSSSSSRQDKDKDNKLMPPPAVA # ASNAAGTSPTASAKESDAQKPRSIPIMSRKASISIEIRRDTEKTATVKTYQSKFRSHGLTEEAPPPPSRKGLKKPTSSAVAASPALMAVPSSLKRPSP # PPRDLSTDKKAKIDINNVAGHVERPGAAKLIAPKKIQTLVETNLFSDALAASIEPKKVVKRKRTSATSPTDKDAPLAPLKFYQDTLDESKSEEKSDDS # SKENDDARSSSPGKDTDADDDDIPLKRVKEDIEQKVQKAKAAAGGEGGEAGNTSDNAEDLPEEPKKPGPGCGPDGPPGVLTLHRRKGPKKKLTWQSEE # KLTQIRYFEVDRSERVNVMKQTFLEMKNMERFSERDALTIARRGFDDTMEPQMEWRPLLEVDNVPDHPNGNLSKQRQVQMDREATTLRALYFSPDMIP # DSPAEAELEPHFAHDIPVIPMDDLTGNPDAVNDYSALAWPEPKKYAPSSGVGANISGSDMGFNDNMLTGLGAGPNLMQNPFDPFMGGMPAPTGMPPGP # NMMPNQVPNGTPQIWQNQMGPVGGPPGVPPMMNGPGGPGMDMSNMNMNNMPPQNFMGNQFGSPVSPFGSGPPPGFNQYPPMMMNGPGPGPVMGPNGPV # MGPNGPMMNGPPNGPMMNGPPNGMGPGLMMGGPRNNNNNNNRNKNNGGGIWRSGGNNFQENSGGNWRSAGSGPNRGGGGGNGNTGVCKQFMRGHCNMG # KNCKYVHPQKKRL] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/3 # CDS introns: 0/2 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 4 # RM: 4 # end gene g126 ### # start gene g127 chr2L AUGUSTUS gene 877362 878173 0.95 + . g127 chr2L AUGUSTUS transcript 877362 878173 0.95 + . g127.t1 chr2L AUGUSTUS start_codon 877362 877364 . + 0 transcript_id "g127.t1"; gene_id "g127"; chr2L AUGUSTUS CDS 877362 877871 0.95 + 0 transcript_id "g127.t1"; gene_id "g127"; chr2L AUGUSTUS CDS 877970 878170 1 + 0 transcript_id "g127.t1"; gene_id "g127"; chr2L AUGUSTUS stop_codon 878171 878173 . + 0 transcript_id "g127.t1"; gene_id "g127"; # protein sequence = [MKSLLNRIILCSAFLAVASGLSFTVTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICLRGINGTSYVGSRFH # RVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIEDVKTDTD # DFPVEPVVISNCGEIPTEQFEFYPDDFNILGWIKAAGLPVTSSFCVLLIFHYFFRQLNMYC] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g127 ### # start gene g128 chr2L AUGUSTUS gene 878281 878700 0.34 - . g128 chr2L AUGUSTUS transcript 878281 878700 0.34 - . g128.t1 chr2L AUGUSTUS stop_codon 878281 878283 . - 0 transcript_id "g128.t1"; gene_id "g128"; chr2L AUGUSTUS CDS 878284 878334 0.91 - 0 transcript_id "g128.t1"; gene_id "g128"; chr2L AUGUSTUS CDS 878392 878700 0.35 - 0 transcript_id "g128.t1"; gene_id "g128"; chr2L AUGUSTUS start_codon 878698 878700 . - 0 transcript_id "g128.t1"; gene_id "g128"; # protein sequence = [MMERLMDAEQDPKVKHAHSFDLDTMVQHQRDLAPKDRRLIEEYYNSLNRSVYPDHKHHFTLAKIFSGCLSNYSGVDVT # MVGLFKPESRFYKKDQHVEDYLFIDLHMGPTLPILLKAVLVS] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g128 ### # start gene g129 chr2L AUGUSTUS gene 878834 883017 0.14 - . g129 chr2L AUGUSTUS transcript 878834 883017 0.14 - . g129.t1 chr2L AUGUSTUS stop_codon 878834 878836 . - 0 transcript_id "g129.t1"; gene_id "g129"; chr2L AUGUSTUS CDS 878837 879799 0.87 - 0 transcript_id "g129.t1"; gene_id "g129"; chr2L AUGUSTUS CDS 879865 880914 0.48 - 0 transcript_id "g129.t1"; gene_id "g129"; chr2L AUGUSTUS CDS 880974 881585 1 - 0 transcript_id "g129.t1"; gene_id "g129"; chr2L AUGUSTUS CDS 881648 881947 1 - 0 transcript_id "g129.t1"; gene_id "g129"; chr2L AUGUSTUS CDS 882048 882604 1 - 2 transcript_id "g129.t1"; gene_id "g129"; chr2L AUGUSTUS CDS 882660 883017 0.37 - 0 transcript_id "g129.t1"; gene_id "g129"; chr2L AUGUSTUS start_codon 883015 883017 . - 0 transcript_id "g129.t1"; gene_id "g129"; # protein sequence = [LRTFPQLVEFGSIPIAVPQKRYMLLMNPLAVPITLQVKATEDGEETPLVLNIRSATEMLPVTVRDPIRHLQQVHEDLQ # CQQLEESKEVHLTITEPELLSVHSVKSTDSVYSSEFEEEVMEPIPQMAAHLLTSLKKQKIFEKSETDRRVIQEALMGLLNSKYFSVFTKHNNYIFMDW # NAVPSDPREVFCDNEIIYLRPNTGRSITILLVPNKVGYFHRSLSVRICPVVASPSLESSDDHPIMKAMIKSEFLCSKLWFEYNCVVPDIVWSNMVDLS # SRIIYAGEDYDFEMNFTNRSTIGAFLHFDVVPNDMTFRDGIWKFFIDGESEVTAKCAVTFRSLGSTRLSGLVSVVGAKRPYAFHLFANVLPSEIRITP # MYVHQRLQVYEKSVVHFYIDNYTPTLTKLSMRLKDIEFQYLTSRGGALASTGQSMYTTLVSVFTDPDLYQNTLYIDLQFDNVMMLPITFLVEGVPLYF # EPDIRKGFDAGLLYTDTKEQFQESIYHHRFPVRVINKGRRAYRVLIIRLNSYGPEANVTSGCATNALTSRFDMEPKNIYLSPSCESQLDILASSYVEG # HATGDFLLQVIDQKYPQRKHIIRIRTSADFVDCQLHWIPKQLNFNYKRCEPLKERSYVETPVLFNPCSLPIAEVTLQVTGPFRIKEFYEDTYEKEIRI # SMNDLERKEIFVILNRGGLKNQYCRQIEGRIMVMALGKQLKSLPLRLAIMVPDVVILQPDLVLFDRGEAYDSIINLVNQGCMPAEFKWKRLETTEVYI # GDEDDPNGIAGEILSEILRMLEYDFSCEDQPNMTKRYQECRCQFRRFEEEGDFILDLLDDVINDMDLRHKPLLFPPKDPTDDLEDSDQSSTSVVRETI # SDILNRLHIDSSDQWSEPSSEYCFSSRFIYFYEKRGVVDHMDLECKLHLPHIRRNHEMRAVFELVILGGRTQRFTVTLVNLPQKIKFHKESIYMGIKP # WYETFDTTLRVNNLSRYPLQLVVVEVKAPGSKEQAREKRLVDGYCKLVTSDIMQLEPLGANQIRVKGILGFSESFRHSFGAMINNSDSSYFHLRGQGV # MPMLEMASPLPSAPMDPLEVEEEYRMLQKIYHYEIFRSITEVDEEPKRADGEEENQVEEKPSITEDFSLLSASESEMSSERKEAHDFQLFRMVHTYVM # VNNNQELPHATVLRQLILAERYLKRLRSNQELYKLHQQVHQTYQKMHNSPGLKQSAMVKHFTVQPIPCEQHGYVLDLGSMARNSVRRFQLKLHFFGPG # KLIAAARTAVRIPGLYVDFNVTDAKQ] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 0 # end gene g129 ### # start gene g130 chr2L AUGUSTUS gene 883092 885052 0.32 - . g130 chr2L AUGUSTUS transcript 883092 885052 0.32 - . g130.t1 chr2L AUGUSTUS stop_codon 883092 883094 . - 0 transcript_id "g130.t1"; gene_id "g130"; chr2L AUGUSTUS CDS 883095 883297 0.37 - 2 transcript_id "g130.t1"; gene_id "g130"; chr2L AUGUSTUS CDS 883365 884185 0.93 - 1 transcript_id "g130.t1"; gene_id "g130"; chr2L AUGUSTUS CDS 884256 884388 1 - 2 transcript_id "g130.t1"; gene_id "g130"; chr2L AUGUSTUS CDS 884442 884652 1 - 0 transcript_id "g130.t1"; gene_id "g130"; chr2L AUGUSTUS CDS 884722 884846 0.99 - 2 transcript_id "g130.t1"; gene_id "g130"; chr2L AUGUSTUS CDS 884908 885052 0.87 - 0 transcript_id "g130.t1"; gene_id "g130"; chr2L AUGUSTUS start_codon 885050 885052 . - 0 transcript_id "g130.t1"; gene_id "g130"; # protein sequence = [MSDSDTNPTQEPDRPAPNVGKPAKERQAKPPVRYSKAKRQFQCCVAKEYYSEYSNMVDTLHITPRMMIHNKCFRVNST # YGLTLNIKNTGLFPRLINVTTDSPEDTSISIPELDLHRYLNTDESLEVKIWIRASSKRDINRRRHILVECFHPNIIFQVPIVVLDKLENPSISDTITF # PSCVPGNKTHYEMIIYNPTKDLVRVRYRNTNRGLQISNNKDILPPKDYGKLLLVIQPKKLNVYRGFFNIKFGVCEYSQILPSPGCVLTSQLIAVPPKP # VMFFFTPKSMGVHLSIGSVLFGMTKFSREDVRTVTVCNETPHEVFVAGKFYSEPLMGSDSQDMDGTLSNKLIDDAVSMHSVLLYDFEENTSVQNVQID # ADAAKHFDYEVPARIGSASSAEIRLIFRPNYNPENPFSDDVEPPYFQRTRATFCFTDSQECIESHNVILSGSIGGVDMEFHPKVIDFRKIYLGEEHCA # QIKVLNVDDVPAKVVYTDCSDPDGSGIRITPAEGFFLEPCTRGIFNLSFYTLLPSRFTNTLRFKVQNGAHYKISLK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/6 # CDS introns: 0/5 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g130 ### # start gene g131 chr2L AUGUSTUS gene 898732 901169 0.98 + . g131 chr2L AUGUSTUS transcript 898732 901169 0.98 + . g131.t1 chr2L AUGUSTUS start_codon 898732 898734 . + 0 transcript_id "g131.t1"; gene_id "g131"; chr2L AUGUSTUS CDS 898732 898941 0.98 + 0 transcript_id "g131.t1"; gene_id "g131"; chr2L AUGUSTUS CDS 899010 901166 1 + 0 transcript_id "g131.t1"; gene_id "g131"; chr2L AUGUSTUS stop_codon 901167 901169 . + 0 transcript_id "g131.t1"; gene_id "g131"; # protein sequence = [MKIAIALLACLGLAAAASFHQTHEVKIADKAFLMKQKFLFEIVYRVEDPLMFEDHIKQGEKFYFEESYYTHYDMYMKK # FFEAYKAHALLPKGEFFGALVMSHAKQARGLFNFFYYAKDWETFAANVAWARMHVNEGMFVYALTMAVIHRNDFHGLMLPSIYEIFPQFFFNSKFVFE # AEKFDYEMWMKMTMYEKEYMDVYYKTNGYDYSTMYRSSDYTYMKDFKTWQWWKLMGLGEHWYTEDKFILRENIYEFNQETKWLSMMKDVKKFYMPVDY # TRDLNLYNKESKLSYFTEDLGWNAYWYYLNMDYSFFLDGNTFDLKNDRRGEWWLYNVHQLLSRYYMERLSHGFGEIPEFSWYQQIEMGYDPQLIYYNG # IGYSFRKNYYEMETYANYDMLDKITGFLKRIHNIVEMGYYKTADGHTIDLRKPEAIEFIGNMLQGNVDAMDKMFYQFWYMLAHMYFADADYYQMDVYP # NVMLNFETMMRDPMYYMFYKSIAQVYFQFMHYLPKYTKEQLLMPGVTMKNVEVSDLTTYFDLVDFDVTNMLNDKMIFQDGKFVWDMSLFARQMRLNHK # PFTYTYTIESEKVEKVVIRAFLGPKFDEFGKVISLAENRMNFMEIDEFYYELKAGTNKITRKSSEFYWTVKDRTTYTELYYYTMMAFDGKYDFPLDIS # EPHCGFPDRLVLPMGWQKGMPMQMFFMVVPYVAPAHEQFSTFDYTYSCGIGSGARYVDSLPFGYPFDRAIDEYEFFVPNMYFKDVSIYHADTMEPYYK # YKSYSNYGHFDYTFFNDYYTKYFKF] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g131 ### # start gene g132 chr2L AUGUSTUS gene 911633 917736 0.37 + . g132 chr2L AUGUSTUS transcript 911633 917736 0.37 + . g132.t1 chr2L AUGUSTUS start_codon 911633 911635 . + 0 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS CDS 911633 911741 0.79 + 0 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS CDS 914338 914493 1 + 2 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS CDS 914800 915003 0.84 + 2 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS CDS 915058 915269 0.92 + 2 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS CDS 915508 915750 1 + 0 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS CDS 915815 916231 0.92 + 0 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS CDS 916282 916557 0.57 + 0 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS CDS 916707 917387 0.83 + 0 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS CDS 917467 917733 0.99 + 0 transcript_id "g132.t1"; gene_id "g132"; chr2L AUGUSTUS stop_codon 917734 917736 . + 0 transcript_id "g132.t1"; gene_id "g132"; # protein sequence = [MSQKAHPERKWSTQRQRKSHNLSHLSAGGTWLEPRSGAFFYDDELELEKEFMTVVNAINGPESEQTMRFYPLIKRLKP # EDGSVTMQEHDIVALVCNSTGIPHIEFDISDEGIQAEKPNHQMTLNLYPAQAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLLQLREVHNDV # VRVRKFHKDDDFRVMWKSIRGERRVVLDCEPNMLVELLNSSTEFGLTGQYNYSLPYGYVTQRDNIVYESSDPPRTLIHDLIHDALQLFAQSWRNASFF # YPDRMVVPRITCDFAASGGRTWAMGRYLARLMKGTSGVNNTNFRTSILQFDEDGQRITFNIEVYDPLDGIGIAIWDPRGQITQLNVDVKAQKKMIYRV # ATRIGPPYFSYNETARELNLTGNALYQGYAVDLIDAIARHVGFEYVFVPVADQQYGKLDKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTV # PFMQLGVSILAYKSPHVEKTLDAYLAPFGGEVWIWILISVFVMTFLKTIVARISKMDWENPHPCNRDPEVRMFEATWWIFAIIIANSYTANLAAFLTS # SKMEGSIANLKDLSAQKKVKFGTIYGGSTYNLLADSNETVYRLAFNLMNNDDPSAYTKDNLEGVDRVRKNRGDYMFLMETTTLEYHREQNCDLRSVGE # KFGEKHYAIAVPFGAEYRSNLSVAILKLSERGELYDLKQKWWKNPNASCFEEPDPDATPDMTFEELRGIFYTLYAGILIAFLIGITEFLVYVQQVALE # ERLTFKDAFKKEIRFVLCVWNNRKPIVAGTPISSVRTTPRRSLDKSLDRTPKSSRRVVIGRSSEEMREMAQGSGSSSGSNNAGRGEKEARV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/9 # CDS introns: 0/8 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g132 ### # start gene g133 chr2L AUGUSTUS gene 933480 933854 0.55 + . g133 chr2L AUGUSTUS transcript 933480 933854 0.55 + . g133.t1 chr2L AUGUSTUS start_codon 933480 933482 . + 0 transcript_id "g133.t1"; gene_id "g133"; chr2L AUGUSTUS CDS 933480 933851 0.55 + 0 transcript_id "g133.t1"; gene_id "g133"; chr2L AUGUSTUS stop_codon 933852 933854 . + 0 transcript_id "g133.t1"; gene_id "g133"; # protein sequence = [MNTTKRVERERERRLKRADFPRTTKRSAENGVLANHKYSPNQQNMMKIHKSLWGGSGPLAELDLDCWAAVVSGKPRQG # FQMQINCVKNFRCQVLNDGGNFLFAAFLCSAQGLRTATPTWARANK] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/1 # CDS introns: 0/0 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 0 # incompatible hint groups: 0 # end gene g133 ### # start gene g134 chr2L AUGUSTUS gene 934567 936420 0.54 + . g134 chr2L AUGUSTUS transcript 934567 936420 0.54 + . g134.t1 chr2L AUGUSTUS start_codon 934567 934569 . + 0 transcript_id "g134.t1"; gene_id "g134"; chr2L AUGUSTUS CDS 934567 934782 0.67 + 0 transcript_id "g134.t1"; gene_id "g134"; chr2L AUGUSTUS CDS 936334 936417 0.61 + 0 transcript_id "g134.t1"; gene_id "g134"; chr2L AUGUSTUS stop_codon 936418 936420 . + 0 transcript_id "g134.t1"; gene_id "g134"; # protein sequence = [MASEWGANLLQQSSQMEFNCLLRFGQHLERKIKRCQLKSGSESWPAERNPELLATTLVARLLHVAFTVALAEVCWQEP # QPKGAYVAVGVPGTAAFSKCRD] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/2 # CDS introns: 0/1 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 1 # RM: 1 # incompatible hint groups: 0 # end gene g134 ### # start gene g135 chr2L AUGUSTUS gene 950493 957452 0.65 + . g135 chr2L AUGUSTUS transcript 950493 957452 0.65 + . g135.t1 chr2L AUGUSTUS start_codon 950493 950495 . + 0 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS CDS 950493 950578 0.69 + 0 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS CDS 951587 952142 1 + 1 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS CDS 952256 953333 0.97 + 0 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS CDS 953396 953510 0.97 + 2 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS CDS 956249 956334 1 + 1 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS CDS 956404 956792 1 + 2 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS CDS 956860 956944 1 + 0 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS CDS 957052 957209 1 + 2 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS CDS 957279 957449 1 + 0 transcript_id "g135.t1"; gene_id "g135"; chr2L AUGUSTUS stop_codon 957450 957452 . + 0 transcript_id "g135.t1"; gene_id "g135"; # protein sequence = [MDFTCLFCCSLAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSFRLNY # LIGGGFAPWGFHLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAVAGVVGRADLAACVCYLLTYLSYLRHMRWRESGDPRQWLALG # ATLILAAAGLLCKETAITALLVCALFDVMRGLSGQVDKQRLRSVCIVLGALFCMAYCRLVIVPGPQTAFSSADNPIARTPSAWTRLLTFLYLPVFNLR # LLLQPNVLSFDWGMDALPRVTSLWDRRNAQSACFYSVLVGVAWGSCRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRKRLANNTKYQAFEAAY # HQQQQEALPCRDCNNNNSSGYVYEGSSPVAQAPAQAPHLVSSAFRGSRSSSSCSNSTNSSSSSSSSSSSSSSSSSSLSGGFQCSSKDYALEGMSPANR # HACVLIMSLSFLALPFLPASNLLFYVGFVVAERLLYLPSVGFCLLVGYGVSKLMSCNQRTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIA # INPPKALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVECFQRAIKFRPNLAVAYLNLGISFIALGKRQQAIEILQAG # SNLDGAAVRDRTAHDQARSSAYLQLGALYVEQGKLQRALAIYREALSSLPGLPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQPNQVAAHLSYG # ITLARNSSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAELAPNDYTLVVAAATAMRLLDRKVDAEMWYRKAVALRPGDAHA # HTNLGAILHLLGRTNHAAASYKAALRLQPGDAITLGNLAKLGVTNV] # Evidence for and against this transcript: # % of transcript supported by hints (any source): 0 # CDS exons: 0/9 # CDS introns: 0/8 # 5'UTR exons and introns: 0/0 # 3'UTR exons and introns: 0/0 # hint groups fully obeyed: 3 # RM: 3 # incompatible hint groups: 1 # RM: 1 # end gene g135 ### # command line: # augustus --species=zebrafish chr2L.sm.fa --softmasking=on --predictionEnd=1000000