# This output was generated with AUGUSTUS (version 3.1.0). # AUGUSTUS is a gene prediction tool written by Mario Stanke (mario.stanke@uni-greifswald.de), # Oliver Keller, Stefanie König and Lizzy Gerischer. # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008), # Using native and syntenically mapped cDNA alignments to improve de novo gene finding # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013 # No extrinsic information on sequences given. # Initializing the parameters using config directory /home/mario/augustus/trunks/config/ ... # bug version. Using default transition matrix. # admissible start codons and their probabilities: ATG(1), CTG(0), TTG(0) # Looks like genes.gb.test is in genbank format. Augustus uses the annotation for evaluation of accuracy. # Read in 100 genbank sequences. # # ----- sequence number 1 (length = 15922, name = chr2L_6215-22136) ----- # # annotation: # Sequence chr2L_6215-22136 length=15922 chr2L_6215-22136 database stop_codon 5001 5003 . - 0 transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database intron 5131 5195 . - . transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database intron 5305 5564 . - . transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database intron 6008 6071 . - . transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database intron 6715 7305 . - . transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database intron 7412 7468 . - . transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database intron 8661 8718 . - . transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database intron 9498 10838 . - . transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database CDS 5001 5130 . - 1 transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database CDS 5196 5304 . - 2 transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database CDS 5565 6007 . - 1 transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database CDS 6072 6714 . - 2 transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database CDS 7306 7411 . - 0 transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database CDS 7469 8660 . - 1 transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database CDS 8719 9497 . - 0 transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database CDS 10839 10922 . - 0 transcript_id "g2.t1.1"; gene_id "g2.t1"; chr2L_6215-22136 database start_codon 10920 10922 . - 0 transcript_id "g2.t1.1"; gene_id "g2.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 1 on both strands # start gene g1 chr2L_6215-22136 AUGUSTUS gene 1 1906 0.65 + . g1 chr2L_6215-22136 AUGUSTUS transcript 1 1906 0.65 + . g1.t1 chr2L_6215-22136 AUGUSTUS intron 1 1359 1 + . transcript_id "g1.t1"; gene_id "g1"; chr2L_6215-22136 AUGUSTUS CDS 1360 1906 0.65 + 1 transcript_id "g1.t1"; gene_id "g1"; chr2L_6215-22136 AUGUSTUS stop_codon 1904 1906 . + 0 transcript_id "g1.t1"; gene_id "g1"; # protein sequence = [NREENPRLNKYRRVDNSYPRFITNEAAEDLIYKKSMGERDQPQSSERISIFNPPVYTQHQVRNEAPYIPTTFDLLSDD # EESSQRVANAGPSFRPLTYSDAVRLSQNGFANSRVSGHSSYTVRRPPALVDRSILSQEMERMDQEQYIYLIRTAAQSNSVGSHYAEPVTDNSEVKKVS # ETNKR] # end gene g1 ### # start gene g2 chr2L_6215-22136 AUGUSTUS gene 2550 3062 0.64 + . g2 chr2L_6215-22136 AUGUSTUS transcript 2550 3062 0.64 + . g2.t1 chr2L_6215-22136 AUGUSTUS start_codon 2550 2552 . + 0 transcript_id "g2.t1"; gene_id "g2"; chr2L_6215-22136 AUGUSTUS CDS 2550 3062 0.64 + 0 transcript_id "g2.t1"; gene_id "g2"; chr2L_6215-22136 AUGUSTUS stop_codon 3060 3062 . + 0 transcript_id "g2.t1"; gene_id "g2"; # protein sequence = [MSLLTERSEKRSGVLPATYAINTFFVPRLLQAGHAGIKRWTRKVDLFSKDIIPVPVHCNGVHWCMAIIHLRNKTIRYY # DSKGKPNRPVLDALEKYLREESIFKPKKQFDTSDFVIESVQNIPRQLDGSDCGIFSCMFAEYITCDVPITFTQSEMLYFRKKMALEIVDGEL] # end gene g2 ### # # ----- sequence number 2 (length = 12337, name = chr2L_89852-102188) ----- # # annotation: # Sequence chr2L_89852-102188 length=12337 chr2L_89852-102188 database start_codon 5001 5003 . + 0 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 5042 5137 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 5220 5280 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 5451 5502 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 7983 8032 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 8620 8675 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 9873 9933 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 10666 10720 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 10853 10910 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 11092 11164 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 11344 11397 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database intron 11769 12024 . + . transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 5001 5041 . + 0 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 5138 5219 . + 1 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 5281 5450 . + 0 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 5503 7982 . + 1 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 8033 8619 . + 2 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 8676 9872 . + 0 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 9934 10665 . + 0 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 10721 10852 . + 0 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 10911 11091 . + 0 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 11165 11343 . + 2 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 11398 11768 . + 0 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database CDS 12025 12067 . + 1 transcript_id "g10.t1.1"; gene_id "g10.t1"; chr2L_89852-102188 database stop_codon 12065 12067 . + 0 transcript_id "g10.t1.1"; gene_id "g10.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 2 on both strands # (none) # # ----- sequence number 3 (length = 5612, name = chr2L_115837-121448) ----- # # annotation: # Sequence chr2L_115837-121448 length=5612 chr2L_115837-121448 database stop_codon 1495 1497 . - 0 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database intron 1924 1983 . - . transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database intron 2241 2299 . - . transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database intron 2469 2524 . - . transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database intron 3039 3094 . - . transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database intron 3241 3297 . - . transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database intron 3400 3451 . - . transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database intron 3540 3594 . - . transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database intron 3719 3991 . - . transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database CDS 1495 1923 . - 0 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database CDS 1984 2240 . - 2 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database CDS 2300 2468 . - 0 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database CDS 2525 3038 . - 1 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database CDS 3095 3240 . - 0 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database CDS 3298 3399 . - 0 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database CDS 3452 3539 . - 1 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database CDS 3595 3718 . - 2 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database CDS 3992 4196 . - 0 transcript_id "g17.t1.1"; gene_id "g17.t1"; chr2L_115837-121448 database start_codon 4194 4196 . - 0 transcript_id "g17.t1.1"; gene_id "g17.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 3 on both strands # start gene g3 chr2L_115837-121448 AUGUSTUS gene 1 3222 0.47 - . g3 chr2L_115837-121448 AUGUSTUS transcript 1 3222 0.47 - . g3.t1 chr2L_115837-121448 AUGUSTUS intron 296 2299 0.68 - . transcript_id "g3.t1"; gene_id "g3"; chr2L_115837-121448 AUGUSTUS intron 2469 2524 0.99 - . transcript_id "g3.t1"; gene_id "g3"; chr2L_115837-121448 AUGUSTUS intron 3039 3094 1 - . transcript_id "g3.t1"; gene_id "g3"; chr2L_115837-121448 AUGUSTUS CDS 1 295 0.57 - 2 transcript_id "g3.t1"; gene_id "g3"; chr2L_115837-121448 AUGUSTUS CDS 2300 2468 0.99 - 0 transcript_id "g3.t1"; gene_id "g3"; chr2L_115837-121448 AUGUSTUS CDS 2525 3038 1 - 1 transcript_id "g3.t1"; gene_id "g3"; chr2L_115837-121448 AUGUSTUS CDS 3095 3222 0.82 - 0 transcript_id "g3.t1"; gene_id "g3"; chr2L_115837-121448 AUGUSTUS start_codon 3220 3222 . - 0 transcript_id "g3.t1"; gene_id "g3"; # protein sequence = [MLRLKDTLNTMAQKLSGGERKRLCIALELVNNPPVIFLDEPTTGLDDLSSSQCIALLKVLAAGGRTVICSIHTPSAKI # FEMLDAVYVLAEGQCVYQGKGSNIVPFLKNFGLCCPITYNPADFIIEVACLEYGGSYHEPMVEAVGNGKVARWSPPAVEGETTTTKTDTTSGASSFYE # RDQFDEEISPKLLEAKCSWWLQYKLLLVRMLIQMWRDKSYIKLKFYMNIVLALLVGSLYFGMGTSASKALFNFGFMFTIVIAYLYLPMMPVLLYSLVL # AMLHLSFAVQVQTEHTIVEEWSWQDHHSNRDLGSYNYYTALDYDQNFDGDENSNDNEYEEDDGRATAAGLDRDEDPCERSCPRYYRPVCILRNG] # end gene g3 ### # # ----- sequence number 4 (length = 5704, name = chr2L_138531-144234) ----- # # annotation: # Sequence chr2L_138531-144234 length=5704 chr2L_138531-144234 database start_codon 4848 4850 . + 0 transcript_id "g25.t1.1"; gene_id "g25.t1"; chr2L_138531-144234 database CDS 4848 5564 . + 0 transcript_id "g25.t1.1"; gene_id "g25.t1"; chr2L_138531-144234 database stop_codon 5562 5564 . + 0 transcript_id "g25.t1.1"; gene_id "g25.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 4 on both strands # start gene g4 chr2L_138531-144234 AUGUSTUS gene 165 602 0.48 - . g4 chr2L_138531-144234 AUGUSTUS transcript 165 602 0.48 - . g4.t1 chr2L_138531-144234 AUGUSTUS stop_codon 165 167 . - 0 transcript_id "g4.t1"; gene_id "g4"; chr2L_138531-144234 AUGUSTUS CDS 165 602 0.48 - 0 transcript_id "g4.t1"; gene_id "g4"; chr2L_138531-144234 AUGUSTUS start_codon 600 602 . - 0 transcript_id "g4.t1"; gene_id "g4"; # protein sequence = [MTFSNQTGIGSVTTINEEIASPVSRILILQHSGRGKPRTIYNASTKLCDLQNVFNSVPLFKPAKDNMLKQSNYTLSCP # LVKGTYVMINMRVSPKNPLLSLLYQPKQTFSVSGGLFEELSRGRRLRALSTYFMTGKVVKKYCGSNE] # end gene g4 ### # start gene g5 chr2L_138531-144234 AUGUSTUS gene 941 3957 0.56 - . g5 chr2L_138531-144234 AUGUSTUS transcript 941 3957 0.56 - . g5.t1 chr2L_138531-144234 AUGUSTUS stop_codon 941 943 . - 0 transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS intron 1158 1210 1 - . transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS intron 1425 1583 0.83 - . transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS intron 2435 2865 0.77 - . transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS intron 3080 3131 0.89 - . transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS CDS 941 1157 0.97 - 1 transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS CDS 1211 1424 1 - 2 transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS CDS 1584 2434 0.64 - 1 transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS CDS 2866 3079 0.99 - 2 transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS CDS 3132 3957 0.89 - 0 transcript_id "g5.t1"; gene_id "g5"; chr2L_138531-144234 AUGUSTUS start_codon 3955 3957 . - 0 transcript_id "g5.t1"; gene_id "g5"; # protein sequence = [MGEVPKIKNLPQVIEPHLPEGCTLDSYSTSYLTKPGDNYGSIMLSVQAKIRSADGGIRDLPLIAKLPPLTNDLYWQIF # QPERTCITENAVYQYLSPELDKLQLESGILPAQIFDGFPRYYGSRVSLDNRATKVDRDAVLVQENVTTRGYRPGNRHRPYNLAETVLILHYLAQYHAL # PIALRLKKPQVYEEYVRPYFKKFDMNSNIDQAETEIMNKEILKDIKLVTSDERDVNRVKELLDIFQAFQASNDVDDGPFTTLVHGDLWINNMMLKYGM # RGEEGTPLKVKIVDFQIAQYGSLVHDIIFVLFSSVDVNVLEDNFYNFLTIYYNAFIQTLRSVNVDTSNYTYEFWSTIFRKLKNMGVDKLPEIRALSEV # VEPHVSGSRLLNYHTSSLTKPGDNYGSVLLAIHARLQKSNGESFEEQLVAKVPPIDPKYWQFFQPEQTCLTENAVYKILAPALATLQDEAGVPDESQF # KGFPRFYGCRESLESNSSKVDQNAVLVLENLRSSGYVSGQRLKAFDLAHTLLALKYMAEFHALSLALRILRPEVFREQVRPFFKKFDWHAEAPEWKSV # MKAETLEDIRRATNNDSRLVARMKELSDQFFEFLAAAPDRPDGPFTSIIHCDFWINNIMFRYGPTGTPVELKIIDFQTAQYDSVVHDIISFLLSSVDT # AILEVEFEHMLEAYYEAFERCLRRVGAKLEVHTFKEFRLEVKRVAYIQVPHAIFMTRFILADSALIGDSEAEERPKLTDVLKNTGSERISRKLSQILN # LAEKFDILY] # end gene g5 ### # start gene g6 chr2L_138531-144234 AUGUSTUS gene 4875 5564 0.62 + . g6 chr2L_138531-144234 AUGUSTUS transcript 4875 5564 0.62 + . g6.t1 chr2L_138531-144234 AUGUSTUS start_codon 4875 4877 . + 0 transcript_id "g6.t1"; gene_id "g6"; chr2L_138531-144234 AUGUSTUS CDS 4875 5564 0.62 + 0 transcript_id "g6.t1"; gene_id "g6"; chr2L_138531-144234 AUGUSTUS stop_codon 5562 5564 . + 0 transcript_id "g6.t1"; gene_id "g6"; # protein sequence = [MYSGASVMTISETNIDGYRYGIPSGQHQEQPIYPFLPNENGDQLVGQLEDDDDEEEDEEQRTLFCGNLDERVTEEILY # EVFLQAGPIEGVRIPTDNNGRPRNFGFVTYQRLCAVPFALDLYQGLELFQKKVTIKQQGGKQLPAYNQSRLRNQFMMEALPQPSPLRHARHSLHNGKP # YDRNPFGHNADQRRRSDSSVMERNRLKPQQHHQHMQGGSRRSDQRSNNKRRLL] # end gene g6 ### # # ----- sequence number 5 (length = 686, name = chr2L_155410-156095) ----- # # annotation: # Sequence chr2L_155410-156095 length=686 chr2L_155410-156095 database start_codon 163 165 . + 0 transcript_id "g29.t1.1"; gene_id "g29.t1"; chr2L_155410-156095 database intron 376 448 . + . transcript_id "g29.t1.1"; gene_id "g29.t1"; chr2L_155410-156095 database CDS 163 375 . + 0 transcript_id "g29.t1.1"; gene_id "g29.t1"; chr2L_155410-156095 database CDS 449 541 . + 0 transcript_id "g29.t1.1"; gene_id "g29.t1"; chr2L_155410-156095 database stop_codon 539 541 . + 0 transcript_id "g29.t1.1"; gene_id "g29.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 5 on both strands # start gene g7 chr2L_155410-156095 AUGUSTUS gene 163 541 0.29 + . g7 chr2L_155410-156095 AUGUSTUS transcript 163 541 0.29 + . g7.t1 chr2L_155410-156095 AUGUSTUS start_codon 163 165 . + 0 transcript_id "g7.t1"; gene_id "g7"; chr2L_155410-156095 AUGUSTUS intron 376 448 0.99 + . transcript_id "g7.t1"; gene_id "g7"; chr2L_155410-156095 AUGUSTUS CDS 163 375 0.29 + 0 transcript_id "g7.t1"; gene_id "g7"; chr2L_155410-156095 AUGUSTUS CDS 449 541 1 + 0 transcript_id "g7.t1"; gene_id "g7"; chr2L_155410-156095 AUGUSTUS stop_codon 539 541 . + 0 transcript_id "g7.t1"; gene_id "g7"; # protein sequence = [MSLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKRECADLISDFQECVGMQKQLMRFHAMRNERY # KQWLKGERKGQEFFADPPRVDAY] # end gene g7 ### # # ----- sequence number 6 (length = 18737, name = chr2L_160723-179459) ----- # # annotation: # Sequence chr2L_160723-179459 length=18737 chr2L_160723-179459 database start_codon 2119 2121 . + 0 transcript_id "g32.t1.1"; gene_id "g32.t1"; chr2L_160723-179459 database intron 2280 3436 . + . transcript_id "g32.t1.1"; gene_id "g32.t1"; chr2L_160723-179459 database intron 3513 14638 . + . transcript_id "g32.t1.1"; gene_id "g32.t1"; chr2L_160723-179459 database CDS 2119 2279 . + 0 transcript_id "g32.t1.1"; gene_id "g32.t1"; chr2L_160723-179459 database CDS 3437 3512 . + 1 transcript_id "g32.t1.1"; gene_id "g32.t1"; chr2L_160723-179459 database CDS 14639 14785 . + 0 transcript_id "g32.t1.1"; gene_id "g32.t1"; chr2L_160723-179459 database stop_codon 14783 14785 . + 0 transcript_id "g32.t1.1"; gene_id "g32.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 6 on both strands # (none) # # ----- sequence number 7 (length = 4907, name = chr2L_206115-211021) ----- # # annotation: # Sequence chr2L_206115-211021 length=4907 chr2L_206115-211021 database start_codon 1398 1400 . + 0 transcript_id "g36.t1.1"; gene_id "g36.t1"; chr2L_206115-211021 database intron 1518 1596 . + . transcript_id "g36.t1.1"; gene_id "g36.t1"; chr2L_206115-211021 database intron 2495 2614 . + . transcript_id "g36.t1.1"; gene_id "g36.t1"; chr2L_206115-211021 database CDS 1398 1517 . + 0 transcript_id "g36.t1.1"; gene_id "g36.t1"; chr2L_206115-211021 database CDS 1597 2494 . + 0 transcript_id "g36.t1.1"; gene_id "g36.t1"; chr2L_206115-211021 database CDS 2615 3744 . + 2 transcript_id "g36.t1.1"; gene_id "g36.t1"; chr2L_206115-211021 database stop_codon 3742 3744 . + 0 transcript_id "g36.t1.1"; gene_id "g36.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 7 on both strands # start gene g8 chr2L_206115-211021 AUGUSTUS gene 1398 3744 1 + . g8 chr2L_206115-211021 AUGUSTUS transcript 1398 3744 1 + . g8.t1 chr2L_206115-211021 AUGUSTUS start_codon 1398 1400 . + 0 transcript_id "g8.t1"; gene_id "g8"; chr2L_206115-211021 AUGUSTUS intron 1518 1596 1 + . transcript_id "g8.t1"; gene_id "g8"; chr2L_206115-211021 AUGUSTUS intron 2495 2614 1 + . transcript_id "g8.t1"; gene_id "g8"; chr2L_206115-211021 AUGUSTUS CDS 1398 1517 1 + 0 transcript_id "g8.t1"; gene_id "g8"; chr2L_206115-211021 AUGUSTUS CDS 1597 2494 1 + 0 transcript_id "g8.t1"; gene_id "g8"; chr2L_206115-211021 AUGUSTUS CDS 2615 3744 1 + 2 transcript_id "g8.t1"; gene_id "g8"; chr2L_206115-211021 AUGUSTUS stop_codon 3742 3744 . + 0 transcript_id "g8.t1"; gene_id "g8"; # protein sequence = [MDESVRYDRCHQVQLGVFNESQLSSVEEDVQNLPQQGTGNILFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAE # MPRRRLLLEWQPNDSIMIADDSQDQGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQTIRFMRKGANGVHSEF # FFQHGNADLFVRSMRDQHLIENAETSRSGGEVYAILTTENQKLKKTFAELDIGQIKASQLPRESWLPNKLAGILGNIPDYVQPPFQRSPKSRPGVLIS # GDRQTSPDNYQIIGLSGSTNSACSSNGQSRGGSAEKSPADSELETLNAQDEKIVNNLPDRQRVERGHPLTETQWLEFQTPDGRISDSARIKELIFRGG # VVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNMKAQWLAMTTTQEANFCGYRERKCQIEKDVKRTDRSLQFFAGEDNPNLTLLQGILMTYV # MYNFDLGYVQGMSDLLAPILEIQVNEVDTFWCFVGFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVWYKRELNS # EDVLKLWECLWTRLPCPNFHLLFSVAILDQETRVIIDSQYEFTEILKHVNELSGNIDVQKTLQVAEGIYLQLKGSETLPNDIRSIIGEPLLPAAAGEE # IDGGMVDEEPTYSDDGFDELVKELTPEEKVRQQALLEEACERSLFLQFH] # end gene g8 ### # # ----- sequence number 8 (length = 36266, name = chr2L_211022-247287) ----- # # annotation: # Sequence chr2L_211022-247287 length=36266 chr2L_211022-247287 database stop_codon 1164 1166 . - 0 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 3922 4012 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 4656 4751 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 4987 5055 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 5255 5323 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 5553 5610 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 7865 15094 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 15488 16350 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 17261 18151 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 18362 19516 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 19607 19736 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 20014 20926 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 21081 21270 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 21359 22975 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 23154 23215 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database intron 31123 31222 . - . transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 1164 3921 . - 1 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 4013 4655 . - 2 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 4752 4986 . - 0 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 5056 5254 . - 1 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 5324 5552 . - 2 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 5611 7864 . - 0 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 15095 15487 . - 0 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 16351 17260 . - 1 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 18152 18361 . - 1 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 19517 19606 . - 1 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 19737 20013 . - 2 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 20927 21080 . - 0 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 21271 21358 . - 1 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 22976 23153 . - 2 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 23216 31122 . - 1 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database CDS 31223 31266 . - 0 transcript_id "g39.t1.1"; gene_id "g39.t1"; chr2L_211022-247287 database start_codon 31264 31266 . - 0 transcript_id "g39.t1.1"; gene_id "g39.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 8 on both strands # start gene g9 chr2L_211022-247287 AUGUSTUS gene 1164 7861 0.95 - . g9 chr2L_211022-247287 AUGUSTUS transcript 1164 7861 0.95 - . g9.t1 chr2L_211022-247287 AUGUSTUS stop_codon 1164 1166 . - 0 transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS intron 3922 4012 1 - . transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS intron 4656 4751 0.99 - . transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS intron 4987 5055 0.99 - . transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS intron 5255 5323 1 - . transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS intron 5553 5610 1 - . transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS CDS 1164 3921 1 - 1 transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS CDS 4013 4655 1 - 2 transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS CDS 4752 4986 0.99 - 0 transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS CDS 5056 5254 0.99 - 1 transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS CDS 5324 5552 1 - 2 transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS CDS 5611 7861 0.96 - 0 transcript_id "g9.t1"; gene_id "g9"; chr2L_211022-247287 AUGUSTUS start_codon 7859 7861 . - 0 transcript_id "g9.t1"; gene_id "g9"; # protein sequence = [MERQGKMELAAKERESQRLQLIPKKWNRREEYEFLRVLTGYGVDLHVSTPMASSNGSSLSPDWTKFKQMAHLERKSDE # TLTDYYKVFVAMCKRQAGLKLSESERGLEGIIEEIEKEHAKLILDRLEVLAKLREVARNPMLEERLKLCTKNADTPDWWEPGRHDKELITAVLKHGLY # RSETFIFNDPNFSFGESEKRFIRELEAQIQRTIKLEAFNAEKAEKLAAAEKDAATEKAAATEKAAAEKAASVKNEVIDLDDELMTNESVIKKESPVTP # IKEEIKSEESPEKHDTADNLEDKNSDAEESTKIKGKEDFNPETTEKEALDESTNLNKDKSSTETLVPEIEDSKPSEDKMEVEELPVAENGEKEGSPEK # CSDAEDKKFSEEKPSSPAVPDGKVSEMEADEAAPNTEENCSGDSESPEKECEDKVVEKVEEEKGENSYEKAEEQKEETEKLEKSSIESEPSEKSETVL # EPEVAVPKKSTGDQDILDLVAGPSDPDDDEVMKEKEKAVEEECKKQAAELKARFPDLEVIQPATVKQQKLEKPKLEMCMIRWFKDFALERRIAHIVAC # VESGNWPVDSKYSAFATCKGATDLSIALHESIPHLSSLERRSTTPDVITITTDQGVTKHLQTSHMQQVASSASAASTSSGVPQVTQSKPSSSNSLPGL # DAKSINAAVAAAVAAAAAGGNATSLSSLLPGMSLSAATGSSAGGVSGLSVPSAGSGVGKKRKRHIAIDVETERAKLHALLNSSTMAPKDWESEIANME # ALSGSSGRGRGGNSSASSGMQPPPAHQHASLSRQSSGQFSKPAVPAMKTPPPSMGAPMDLSSSLPKMNMTEMLKSASSSGAIDLSEVQDFSMPSKKSS # VHAALSSAFPSMGNKSKLDDTLNKLMKKNNCTIEEPVIGKEKKRKKLDEIVLGLSAAKEQKTFPDPSLPSSKKPQIPPSVSVTPANLQSSSNQQSNQK # PFTITVTTVPGKSKSGSSNSGSGTGGSSSASGGGAGGSGLSALQNMAMGGLSSKDSLNALLAQTMATDPQTFLKQQQKMMQFLPPAQRKAYENMLAEM # EQAMKISSKFSTNSPHDVKVNKWLSDMTSPLGDQLSIDYVGGGGASGSGSGNSRRSNRQQGNSQQSSSAAQLQKQQQQQQQQQQQQQQHSMPGPQNLT # GEEPVPVINKQTGKRLGGNKAPQLKRLMQWLTENPNYEVDPKWLEQMQNPMSTPSPRPASMESGYGSSAVKSHGGRPLSNLSSTSSSSHTQQQSSAAQ # SQAGGNSGSSKKNSRQQTAASAALDQAALQFGSLAGLNPSLLANLPGLGAFDPKNPLAAFDPKNPLLSMSFGGMPGMGNIPGLGNLNNMNLFASLAGM # GGLGNLAGMDTQSLAALMAAAGPTLGGLTGASGGAGSGKSQAQSQSSATSSSSSASKKKQQQQQQQAQNEAAQLAAAISASTGGSGASGGKNAAASAS # QLAAGFPFLFPNPSLLYPPMGLGGLNPYSLGSSGLGSAYDQLAQQYNLLNGATSSASNTSSTQSKSHQSQSKSSQSRNTTASANSAASLMNAMASMGG # GASTVTTPSTSASGSGRGRQSSSRNQSQTTPTAADMAQLSSLLMPGADPHLLESLSRMSNMDLAQATRLMSSLGMPPLSGTPSSSGGGNTSTSKRSSQ # AANEANVQAKEQQKWLESLARGALPTDLAALQAFSQGKMPSTSGSNTGTSTSSSKSSKAAATAAAAQLPQIPGMSSDFPQAFLAEMAAQAMAAAGGSL # PLSGPGSLASLAGLTGGSAGGGGSSASGSTSHSSSKRQREQDAFKQQMDYYTKTLGLGSGISLIPTSSAGGSSASSSAANAAAAAYAAALDAEQQHQQ # QQKALSKRARGDLHPTKEELAALAAGLPLNLGASMSSIEKSLRGGSSSSSSSTPAPMTAEQDKVTLTPLNASGGGSGSSSSSAAAAGLAANLPSQTTI # TIAPPISSGASTSSERSERSESRISLTITNAADAAKLPPPYEEADELIIQPILKKPTAANPGSSHGGSVDDLDTAENTSAANLSGSSSSSAAAAAAAA # AEENRRSSNRLKRPRSGNEQGSGSVEGQPPEKRRELRSTRHTRSSADASTLNLSTGSESGAEERNE] # end gene g9 ### # start gene g10 chr2L_211022-247287 AUGUSTUS gene 15086 21150 0.14 - . g10 chr2L_211022-247287 AUGUSTUS transcript 15086 21150 0.14 - . g10.t1 chr2L_211022-247287 AUGUSTUS stop_codon 15086 15088 . - 0 transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS intron 15488 16350 0.94 - . transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS intron 17261 18151 1 - . transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS intron 18362 19516 0.62 - . transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS intron 19607 19736 0.82 - . transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS intron 20014 20941 0.97 - . transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS intron 21081 21144 0.2 - . transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS CDS 15086 15487 0.92 - 0 transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS CDS 16351 17260 1 - 1 transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS CDS 18152 18361 0.71 - 1 transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS CDS 19517 19606 0.76 - 1 transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS CDS 19737 20013 0.91 - 2 transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS CDS 20942 21080 0.55 - 0 transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS CDS 21145 21150 0.23 - 0 transcript_id "g10.t1"; gene_id "g10"; chr2L_211022-247287 AUGUSTUS start_codon 21148 21150 . - 0 transcript_id "g10.t1"; gene_id "g10"; # protein sequence = [MNLLYCLQVYKGDEKIKTFIWDLITPTEDGEVQKISRDHSGLHNLVPRGRNGGKSNKESTGVSTPAPGSASGSNSGNT # TPAHKSSALDGSDKDSGGINASAVAAAVTSIHDPNHWSKKEKYDADAYLEGAYKKHLGRHANKVLLRVRMLYYIQHEVIGDFVQQIKDNTPISELPIR # PPPTPDQVPSSWWNPICCDKSLLVGTYKHGCEMYRQMRADPNLCFVTHVGAGAAGDDLAVTSLPINEDDANSKHDDGDEVDDDGTTTTKDSDSTKLTG # GDNKDSLLDPERPSSSGKSSSENASGGNDKTESENDATTVSESSYKSEVLPGKGSDLDVSVAQQDALSATPELANTSDPKMNKNDAQVSASVSCDPAD # SSSPEAAGKAQGTGVQTGDAGELDIESEKKDNEKETKESTGDAPAVEAKKDSAAIARAEGDKTESCTNNATTNISTTTTTTTITNTTTTTNNPSSKAA # NSNNTTDHANSNSHLGLDEEESVAGSYPPTVAAVEDATTMWPSMQDLNTRLRRVITAYQRNYKKEELKLQQKAKLQALVSSTPPLSVPTTPTLQSMQM # QLQSGSGSGGSGIGSSAQHDASGRSLQALMQSQGASTSAAAAAAASSAGGSCSGSGQVGMGGAGVMPAMPTAADISLMLSILNTTDVNQLANLDINKL # AMYLVSMNNVR] # end gene g10 ### # start gene g11 chr2L_211022-247287 AUGUSTUS gene 21551 22944 0.97 + . g11 chr2L_211022-247287 AUGUSTUS transcript 21551 22944 0.97 + . g11.t1 chr2L_211022-247287 AUGUSTUS start_codon 21551 21553 . + 0 transcript_id "g11.t1"; gene_id "g11"; chr2L_211022-247287 AUGUSTUS intron 22134 22195 1 + . transcript_id "g11.t1"; gene_id "g11"; chr2L_211022-247287 AUGUSTUS CDS 21551 22133 0.97 + 0 transcript_id "g11.t1"; gene_id "g11"; chr2L_211022-247287 AUGUSTUS CDS 22196 22944 1 + 2 transcript_id "g11.t1"; gene_id "g11"; chr2L_211022-247287 AUGUSTUS stop_codon 22942 22944 . + 0 transcript_id "g11.t1"; gene_id "g11"; # protein sequence = [MMSTSGHSLKTDTQSRRSVKSHPSKLHVFEYAAPQDLDVVAIIYKFYLEDFRNFTEEERQLRLSSLDAIDMLHTIEQV # HNDVATLRLENHIMVEFLEKNDPKLLLGLRQRRTSILRKLQTKRGSAQGSHGVNSRHSSSKRSIPMSVNQLVSISGISAPEKRRGMDYKLNFKAKAEM # AEKRAAEVEKRVADIERNAMTEVKQLRAKIEELRFRSEETIETENNFMLHFLRDENDVAFLESATERQIERKLRKFTSNWFKNARALLGTMKLTIVSL # QETCQQHRADLITKSDLSGILTAVDFEKLIIKRTELVNQLEEKNIHMAGLKGVTGKTSLAMTEEKQAMMNLETEMRTVLNRTDEVTRAIQKLEKEVAA # VQMHNTKDYVTLDELRAQLQDYEAPSVSEYIERKEEAHVLEKEEKMLQRKIYILNMKLNNAIRRRNRLEEN] # end gene g11 ### # start gene g12 chr2L_211022-247287 AUGUSTUS gene 22972 32911 0.61 - . g12 chr2L_211022-247287 AUGUSTUS transcript 22972 32911 0.61 - . g12.t1 chr2L_211022-247287 AUGUSTUS stop_codon 22972 22974 . - 0 transcript_id "g12.t1"; gene_id "g12"; chr2L_211022-247287 AUGUSTUS intron 23154 23215 1 - . transcript_id "g12.t1"; gene_id "g12"; chr2L_211022-247287 AUGUSTUS intron 31123 32804 0.98 - . transcript_id "g12.t1"; gene_id "g12"; chr2L_211022-247287 AUGUSTUS CDS 22972 23153 1 - 2 transcript_id "g12.t1"; gene_id "g12"; chr2L_211022-247287 AUGUSTUS CDS 23216 31122 0.62 - 1 transcript_id "g12.t1"; gene_id "g12"; chr2L_211022-247287 AUGUSTUS CDS 32805 32911 0.98 - 0 transcript_id "g12.t1"; gene_id "g12"; chr2L_211022-247287 AUGUSTUS start_codon 32909 32911 . - 0 transcript_id "g12.t1"; gene_id "g12"; # protein sequence = [MDFLGCRGDDDWLNDCPISANYSRQTHKGASPGEGRDPYYRYDAAAAAAAAAAANPRAMGPPGGYPPRHRPPHPLQQQ # PQYPSYQPTAENLYGLGAADHQAAMGLGVGVGVGAGMGDLSGWGAAPSVPGQAAAYPGAGLGAYGHPQAAPPSQQQRQSNASAYRQHMPAYGQQDQQK # LASYGAQQSMMAGYGSLAPQQQQQQQPPTPQQQQQAQQVQQQAQQQQQQQQQQSQQQARLPQHYPQAPGQHPLYPGVGAPTVQAGQPPTPQAYAHSPY # GSPMQHQPSRGAPQHVGYGHTGLDQASAYGQHVPGGAPPGHHLSAQQQQAAQQLGAHQQQQLQSQQQQQAQQQQPHVSLMQQQQLPGAGLPPPHMGMP # PSYGSHHQQQQQQQQTQQQQQQSAPPYMSSSKHQQAAAQLNSSPQYRAPFPQLSPQMSPRPPTMSPHPQMSPRPVGVSPAKPPPPQQQQQQTQAQQPQ # QVVSNQPSQHSIQGMVGLPSPRPQPPTSGAGGAGAKGPAPVAAPVNTLQALEQMVMPSQALGLPPMDYPSAYRSAVGPRMPASPQQQQQQHQQWGAAH # GAQHLAALQQQQAQQQQQQVQQQQQAPPQQQQQAAMLQAQQQHHQQQLSMYGQPMGQQPQTAQQQVVPPVTSQPPVVAASQQQQQQQHQQQSLNDQLQ # HSINDIVGGGNSSGATGGAQNQHQQQPQLAAMSSPLHQQNLPNMHHLIQPTMETTQPTQQQQQTSQQQQQPQQPQATLTSPHHQQMQHQSPIHQQQQS # PHHQQHLPSYNQSQQQFDPFANILGDNQPAASQQTMSPAHVSSPVPAQMQQQQHQTQQQPSQQVPQSQQQQVSQPQQQTQQQQPSTPSHHLSSILNET # ANSNDSSTLAVAANDSNNSSSNSSTNSIVNNQPTSVHDSNSQSSINSSSNNQQQLLMDNTNSHGGNSESAQNAGVDVGLFDNNSMSSNSAAVAAVASN # AASAAAALLDSNSQSSNAEFEKNQSEGEGLGVVEGVIANETDLPQDENSVSKTQDITLSTELPTIQDDLQEKPTAEMEQTQLGQSLGDLSKSLLEEPK # TVEESGEDKSQSAPGVAPPADPIIPVTQPPQQQMPPIGMPMHPIAPGYEAQAQGQGHMPPMMPPYGGAPGMYPPYPMLHQQEIAALQQQIQELYCMPP # GHELQHQDKLMRMQERLNLLTQHEVNDQCAGGPQCLLFQNVPPMYGPPGNPLLNQQMVESPQVSSTTGRGRGKSANKPRKPRAKKGEKAQVGQQQDLM # DISGNVAMGAANAVSSIPTTQLPVSEDCVTQGAGDTSVVGMLEYSEGMGDLSQDVHSANELDTSTDGSGKKKKPRKPRTPKDPNKPPRDRTPKAKKPK # DPNDPNSTETPAAVKKRAGASKRRKQYGEDGAEQTGEGSEVEDNKPLVPKAGSADGEAETTSGGTGVDGESPDYDDIPVSKIPRGSNEDEKEAEAGDE # TVDSVPDSAGDPASTPSRRDRKRSTARSRRNANSEEGGSARKNRGSLSAKALKKRRNRGRIVPESDGEDDTLDRTPPPSPPPDSEMDSNKRRSSRNTQ # RKKYIDDVMLRFSDDENSLLVASPVKKDKKPSANASNSNAGSDVEKTEPQSGAEGDAAQEVGEEKSNLPLDESSQLEASSSTSAVAEKERQISTDAAN # AAMSSKPNYVYINTGDEDSMVVQLVLAMRMGKRELILDKPKEKAPEPKQDEEKSELDEATTDKPEGDEKFKTEGESKKDLTDSEETKLESSAMEVDSK # EESEPDDSKKSDEDNKDKDKMEVDDEVGKSDKESKPEEQSETVKTEENSKAIEEDKSSTVLTADHAKEPETVLEKMEVDEKANDDQSAVSKAEGSDEK # STDDSNPEEATTEKNKESLEIEGEKERVKEGEESVKKENDEKTEADMENKPEPVFIDVEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQK # QSQQLNIFENIEDEPFNQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPELWKKL # EKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHGSVTSKQ # MIQDYEYYYKTESGKVLKEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLE # PSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRK # CCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAI # DRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQGS # KDGNNKQLSKKEIEDLLKKGAYGAVMDDDNAGDKFCEEDIDSILKRRTQVITMESEKGSTFSKASFAASGNRSDITIDDPDFWTKWAKKVDIDPDACE # RDETEDLVLSEPRRRTQIKRYGHEDVMELNSEESSNENSDEEGGIGLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVE # KGLLSFG] # end gene g12 ### # # ----- sequence number 9 (length = 4485, name = chr2L_270315-274799) ----- # # annotation: # Sequence chr2L_270315-274799 length=4485 chr2L_270315-274799 database start_codon 3627 3629 . + 0 transcript_id "g46.t1.1"; gene_id "g46.t1"; chr2L_270315-274799 database CDS 3627 4337 . + 0 transcript_id "g46.t1.1"; gene_id "g46.t1"; chr2L_270315-274799 database stop_codon 4335 4337 . + 0 transcript_id "g46.t1.1"; gene_id "g46.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 9 on both strands # start gene g13 chr2L_270315-274799 AUGUSTUS gene 1 1000 0.99 + . g13 chr2L_270315-274799 AUGUSTUS transcript 1 1000 0.99 + . g13.t1 chr2L_270315-274799 AUGUSTUS intron 293 346 1 + . transcript_id "g13.t1"; gene_id "g13"; chr2L_270315-274799 AUGUSTUS CDS 1 292 0.99 + 1 transcript_id "g13.t1"; gene_id "g13"; chr2L_270315-274799 AUGUSTUS CDS 347 1000 1 + 0 transcript_id "g13.t1"; gene_id "g13"; chr2L_270315-274799 AUGUSTUS stop_codon 998 1000 . + 0 transcript_id "g13.t1"; gene_id "g13"; # protein sequence = [KSTLQERKPSFCDEYQATFEGLLDSDLCYALNAAIAMEGQTALSFAPDDPIYKAAQYILDYIISGLNDDLSEDECALQ # VLISRIKDFVCDAKKYVHYKAYQIIGFARDHKAMEVPPSMAKQPKNHSRASHVSFSGVASTIGVGSYEIHPFVDVRPCSERRATPAGSLASLVVSQIG # EQVIQDKVRLPHLNRNQIVFIEHYLVKFKRDLLVGLDKLVFAAIQCHFENRMMEVREELLLLDRNYLFEQIARGILSYAVNPLNYQSVLKLAVSVQSC # EIIWELQQTMLKPGIDPRGQNHPVSCGTEQERETLALCIP] # end gene g13 ### # start gene g14 chr2L_270315-274799 AUGUSTUS gene 1653 3320 0.57 - . g14 chr2L_270315-274799 AUGUSTUS transcript 1653 3320 0.57 - . g14.t1 chr2L_270315-274799 AUGUSTUS stop_codon 1653 1655 . - 0 transcript_id "g14.t1"; gene_id "g14"; chr2L_270315-274799 AUGUSTUS intron 2193 2240 0.72 - . transcript_id "g14.t1"; gene_id "g14"; chr2L_270315-274799 AUGUSTUS CDS 1653 2192 0.57 - 0 transcript_id "g14.t1"; gene_id "g14"; chr2L_270315-274799 AUGUSTUS CDS 2241 3320 0.99 - 0 transcript_id "g14.t1"; gene_id "g14"; chr2L_270315-274799 AUGUSTUS start_codon 3318 3320 . - 0 transcript_id "g14.t1"; gene_id "g14"; # protein sequence = [MHNSGGQSGWNLSGEERKPFSNYGRNNQQRRSSGGGGRGSHSQNRAANGNWPDAGSEGGQNGNAFNKFRDPQQELDNH # QPNKRGGRRNRGGGGGGGGWGGRRGNRGRDSNRRGGRNNSWQPKDQHVSPGQSNMLYFDNVGDFTEDPPLPRSSPAPSSLRQESLPPVTFAADLTPPP # PVSVAPPDVAVTPEEPTVPLINIKKEKEMEHKSKIKQFVKAEPKSPKKKKVNSSRSSSTSGEESEPEPGEMVVNTKAVVVPSPKAKAIKTPVASTPKP # KAVKPVSSSDSSTSDSDTDDEQSHPPAKSKKMEKNTEEDVVCMGSQERQFTITDEEESTEPEDDKKARKQKNKGKTVDVCGICDKKGHTSFQCQMICR # NCSGSYHGLKNCPNPPNLNIAIQSFVEFAMQQMTAFHCEQGFGFPAGTVTAPVSAKPKKDKKASIKKIKKSSQKRMKVEPKDHDEEDDEEDDDEDEDD # SSESDDSESSEEPHPAPVSKQKRKRGTKASVSAAASLPPQVFPFPLLGAPGAPFNSMMYSYRAPFNFSK] # end gene g14 ### # start gene g15 chr2L_270315-274799 AUGUSTUS gene 3672 4337 0.36 + . g15 chr2L_270315-274799 AUGUSTUS transcript 3672 4337 0.36 + . g15.t1 chr2L_270315-274799 AUGUSTUS start_codon 3672 3674 . + 0 transcript_id "g15.t1"; gene_id "g15"; chr2L_270315-274799 AUGUSTUS CDS 3672 4337 0.36 + 0 transcript_id "g15.t1"; gene_id "g15"; chr2L_270315-274799 AUGUSTUS stop_codon 4335 4337 . + 0 transcript_id "g15.t1"; gene_id "g15"; # protein sequence = [MNSTNPKKTEDNDRHERQLQSRTKDWGKTKFKPKKYVQPKPALVPQATATPWQHVKNDIITDSSDRGHQDVDSEDARQ # FMQQRQKNHRRNVIEANRSQDTTWEPFNDEKPSTERKQQLSTDVENFTFKERNFFRKQLTLGFNLTKKNATLKSALKDLKYRQLTKDKFELERSNHTR # RNVKSSNAKEAKGSHPFQKMRDNAHPYRKKGPNRRNPFQKGPHNE] # end gene g15 ### # # ----- sequence number 10 (length = 2697, name = chr2L_274800-277496) ----- # # annotation: # Sequence chr2L_274800-277496 length=2697 chr2L_274800-277496 database stop_codon 148 150 . - 0 transcript_id "g47.t1.1"; gene_id "g47.t1"; chr2L_274800-277496 database intron 453 519 . - . transcript_id "g47.t1.1"; gene_id "g47.t1"; chr2L_274800-277496 database intron 1699 1939 . - . transcript_id "g47.t1.1"; gene_id "g47.t1"; chr2L_274800-277496 database intron 2105 2159 . - . transcript_id "g47.t1.1"; gene_id "g47.t1"; chr2L_274800-277496 database CDS 148 452 . - 2 transcript_id "g47.t1.1"; gene_id "g47.t1"; chr2L_274800-277496 database CDS 520 1698 . - 2 transcript_id "g47.t1.1"; gene_id "g47.t1"; chr2L_274800-277496 database CDS 1940 2104 . - 2 transcript_id "g47.t1.1"; gene_id "g47.t1"; chr2L_274800-277496 database CDS 2160 2343 . - 0 transcript_id "g47.t1.1"; gene_id "g47.t1"; chr2L_274800-277496 database start_codon 2341 2343 . - 0 transcript_id "g47.t1.1"; gene_id "g47.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 10 on both strands # start gene g16 chr2L_274800-277496 AUGUSTUS gene 148 2343 0.53 - . g16 chr2L_274800-277496 AUGUSTUS transcript 148 2343 0.53 - . g16.t1 chr2L_274800-277496 AUGUSTUS stop_codon 148 150 . - 0 transcript_id "g16.t1"; gene_id "g16"; chr2L_274800-277496 AUGUSTUS intron 453 519 1 - . transcript_id "g16.t1"; gene_id "g16"; chr2L_274800-277496 AUGUSTUS intron 1699 1939 1 - . transcript_id "g16.t1"; gene_id "g16"; chr2L_274800-277496 AUGUSTUS intron 2105 2159 0.54 - . transcript_id "g16.t1"; gene_id "g16"; chr2L_274800-277496 AUGUSTUS CDS 148 452 0.99 - 2 transcript_id "g16.t1"; gene_id "g16"; chr2L_274800-277496 AUGUSTUS CDS 520 1698 1 - 2 transcript_id "g16.t1"; gene_id "g16"; chr2L_274800-277496 AUGUSTUS CDS 1940 2104 1 - 2 transcript_id "g16.t1"; gene_id "g16"; chr2L_274800-277496 AUGUSTUS CDS 2160 2343 0.54 - 0 transcript_id "g16.t1"; gene_id "g16"; chr2L_274800-277496 AUGUSTUS start_codon 2341 2343 . - 0 transcript_id "g16.t1"; gene_id "g16"; # protein sequence = [MDVAPAPPASSGGDHSTQQAPISPNQNANQAPVALAKATTIENGVQTGGAKKPESCGEKAPAVEPTHSTDASQKDDDE # GKPKTELADKVLITICSADRKIKKTFMSLPTRKDVIDKAHKYGLCGNTIVLESNGCEICEDDVLLFAAKEKILLMLLAESEEYVVLPPPSPLNRSERA # GSSVDPSFYANNSIVSNPNDSTVSNDETMSLSSVTPSSAKSSALFKEFSIPWSKVPGDIMKLLKGKGSLGKRLNTLANVLVEALREISAHIPIRIFRQ # VAQQAAEKYPDSLLEKDREGQFIATTPQSLISKMINRNNALNKPQKRGSSGTFEIHIPNKKRKFGGGASNGDAKSLALNRDLEHKKELLISSYRGSSP # LEQSVIIEYMKECFPLQRSFFNNSEKIPDITAIKDNWPYIFDKAVLYQHFELLMSIDPRALEKRLATEKDRFFRFFKSSKNKKISSLDETNANFLRGI # AYYFNEDPDYIFKHLENSSLSKESLQSTNPTNAPWVALVNSPITTADGVESQMEAKVYIEGQIMATFAAKDEDLPDILAQLICYYYTFNMMYPKEANQ # TLEFIVVYFLQHSPEQVRSAKKSVTTNGKFNHLIAKLANVHG] # end gene g16 ### # # ----- sequence number 11 (length = 2568, name = chr2L_290745-293312) ----- # # annotation: # Sequence chr2L_290745-293312 length=2568 chr2L_290745-293312 database start_codon 1825 1827 . + 0 transcript_id "g53.t1.1"; gene_id "g53.t1"; chr2L_290745-293312 database intron 1917 1972 . + . transcript_id "g53.t1.1"; gene_id "g53.t1"; chr2L_290745-293312 database CDS 1825 1916 . + 0 transcript_id "g53.t1.1"; gene_id "g53.t1"; chr2L_290745-293312 database CDS 1973 2258 . + 1 transcript_id "g53.t1.1"; gene_id "g53.t1"; chr2L_290745-293312 database stop_codon 2256 2258 . + 0 transcript_id "g53.t1.1"; gene_id "g53.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 11 on both strands # start gene g17 chr2L_290745-293312 AUGUSTUS gene 1 266 0.97 - . g17 chr2L_290745-293312 AUGUSTUS transcript 1 266 0.97 - . g17.t1 chr2L_290745-293312 AUGUSTUS intron 1 68 0.97 - . transcript_id "g17.t1"; gene_id "g17"; chr2L_290745-293312 AUGUSTUS CDS 69 266 0.97 - 0 transcript_id "g17.t1"; gene_id "g17"; chr2L_290745-293312 AUGUSTUS start_codon 264 266 . - 0 transcript_id "g17.t1"; gene_id "g17"; # protein sequence = [MTKVELYKSRVFVTIIHLCALGQFAYGLYYSSFEIQRSYKLKTSLNRRLVPESLPQKIKLLSYWSL] # end gene g17 ### # start gene g18 chr2L_290745-293312 AUGUSTUS gene 1825 2258 0.98 + . g18 chr2L_290745-293312 AUGUSTUS transcript 1825 2258 0.98 + . g18.t1 chr2L_290745-293312 AUGUSTUS start_codon 1825 1827 . + 0 transcript_id "g18.t1"; gene_id "g18"; chr2L_290745-293312 AUGUSTUS intron 1917 1972 0.98 + . transcript_id "g18.t1"; gene_id "g18"; chr2L_290745-293312 AUGUSTUS CDS 1825 1916 0.98 + 0 transcript_id "g18.t1"; gene_id "g18"; chr2L_290745-293312 AUGUSTUS CDS 1973 2258 1 + 1 transcript_id "g18.t1"; gene_id "g18"; chr2L_290745-293312 AUGUSTUS stop_codon 2256 2258 . + 0 transcript_id "g18.t1"; gene_id "g18"; # protein sequence = [MSTASRVTLGLAVSISTAIIGYVHYKQSADRLRLHDGVLRDVEQQQRRKHENTYTLQQQIDMTKQLKAREASSNSSDT # PVPPSTHRAQSNLQAEKPAVQNEGEAFRGVPQGGTTNHDGSPPTDIA] # end gene g18 ### # # ----- sequence number 12 (length = 1866, name = chr2L_319811-321676) ----- # # annotation: # Sequence chr2L_319811-321676 length=1866 chr2L_319811-321676 database stop_codon 578 580 . - 0 transcript_id "g59.t1.1"; gene_id "g59.t1"; chr2L_319811-321676 database CDS 578 1411 . - 0 transcript_id "g59.t1.1"; gene_id "g59.t1"; chr2L_319811-321676 database start_codon 1409 1411 . - 0 transcript_id "g59.t1.1"; gene_id "g59.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 12 on both strands # start gene g19 chr2L_319811-321676 AUGUSTUS gene 578 1411 0.92 - . g19 chr2L_319811-321676 AUGUSTUS transcript 578 1411 0.92 - . g19.t1 chr2L_319811-321676 AUGUSTUS stop_codon 578 580 . - 0 transcript_id "g19.t1"; gene_id "g19"; chr2L_319811-321676 AUGUSTUS CDS 578 1411 0.92 - 0 transcript_id "g19.t1"; gene_id "g19"; chr2L_319811-321676 AUGUSTUS start_codon 1409 1411 . - 0 transcript_id "g19.t1"; gene_id "g19"; # protein sequence = [MKLITVTLVIALVAAAQGAKLSDKLAKLVPSFATGFVINGTEAEPHSAPYIVSLATNYLKHSHICGGTLINKDWIVTA # AHCISEPVGMSIIAGLHTRAEVDELTQQRQVDFGRVHEKYTGGVGPYDIALLHVNESFIFNEWVQPATLPSREQVHEGETHLYGWGQPKSYIFSGAKT # LQTVTTQILNYEECKEELPESAPIAESNICSSSLQQSKSACNGDSGGPLVVEFTNAPSELIGIVSWGYIPCGLANMPSIYTKVSAYIDWITNIQSAYY # KLF] # end gene g19 ### # # ----- sequence number 13 (length = 5783, name = chr2L_408642-414424) ----- # # annotation: # Sequence chr2L_408642-414424 length=5783 chr2L_408642-414424 database stop_codon 747 749 . - 0 transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database intron 825 890 . - . transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database intron 1096 1148 . - . transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database intron 1433 1485 . - . transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database intron 2420 2487 . - . transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database intron 3078 3140 . - . transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database intron 3597 3805 . - . transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database intron 4018 4754 . - . transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database CDS 747 824 . - 0 transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database CDS 891 1095 . - 1 transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database CDS 1149 1432 . - 0 transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database CDS 1486 2419 . - 1 transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database CDS 2488 3077 . - 0 transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database CDS 3141 3596 . - 0 transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database CDS 3806 4017 . - 2 transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database CDS 4755 4818 . - 0 transcript_id "g71.t1.1"; gene_id "g71.t1"; chr2L_408642-414424 database start_codon 4816 4818 . - 0 transcript_id "g71.t1.1"; gene_id "g71.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 13 on both strands # start gene g20 chr2L_408642-414424 AUGUSTUS gene 747 4818 0.96 - . g20 chr2L_408642-414424 AUGUSTUS transcript 747 4818 0.96 - . g20.t1 chr2L_408642-414424 AUGUSTUS stop_codon 747 749 . - 0 transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS intron 825 890 0.97 - . transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS intron 1096 1148 1 - . transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS intron 1433 1485 1 - . transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS intron 2420 2487 1 - . transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS intron 3078 3140 1 - . transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS intron 3597 3805 1 - . transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS intron 4018 4754 0.99 - . transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS CDS 747 824 0.97 - 0 transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS CDS 891 1095 1 - 1 transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS CDS 1149 1432 1 - 0 transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS CDS 1486 2419 1 - 1 transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS CDS 2488 3077 1 - 0 transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS CDS 3141 3596 1 - 0 transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS CDS 3806 4017 0.99 - 2 transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS CDS 4755 4818 0.99 - 0 transcript_id "g20.t1"; gene_id "g20"; chr2L_408642-414424 AUGUSTUS start_codon 4816 4818 . - 0 transcript_id "g20.t1"; gene_id "g20"; # protein sequence = [MAPVRGDGMRGLAVFISDIRNCKSKEAEVKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEA # VNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVHVNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFR # SSPDIIPGGEWTSRIIHLLNDQHMGVVTAATSLIDALVKRNPDEYKGCVNLAVSRLSRIVTASYTDLQDYTYYFVPAPWLSVKLLRLLQNYNPVTEEA # GVRARLNETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATSEFSHEEVKKHQEV # VILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVI # NREEVQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHSKYHLCSPMTRALLLSTYIKFINLFPEIRTNIQDVFRQHSN # LRSADAELQQRASEYLQLSIVASTDVLATVLEEMPSFPERESSILAVLKKKKPGRVPENEIRESKSPAPLTSAAQNNALVNNSHSKLNNSNANTDLLG # LSTPPSNNIGSGSNSNSTLIDVLGDMYGSNSNNNSSAVYNTKKFLFKNNGVLFENEMLQIGVKSEFRQNLGRLGLFYGNKTQVPLTNFNPVLQWSAED # ALKLNVQMKVVEPTLEAGAQIQQLLTAECIEDYADAPTIEISFRYNGTQQKFSIKLPLSVNKFFEPTEMNAESFFARWKNLSGEQQRSQKVFKAAQPL # DLPGARNKLMGFGMQLLDQVDPNPDNMVCAGIIHTQSQQVGCLMRLEPNKQAQMFRLTVRASKETVTREICDLLTDQF] # end gene g20 ### # # ----- sequence number 14 (length = 8081, name = chr2L_476395-484475) ----- # # annotation: # Sequence chr2L_476395-484475 length=8081 chr2L_476395-484475 database stop_codon 593 595 . - 0 transcript_id "g88.t1.1"; gene_id "g88.t1"; chr2L_476395-484475 database intron 1811 3012 . - . transcript_id "g88.t1.1"; gene_id "g88.t1"; chr2L_476395-484475 database CDS 593 1810 . - 0 transcript_id "g88.t1.1"; gene_id "g88.t1"; chr2L_476395-484475 database CDS 3013 3081 . - 0 transcript_id "g88.t1.1"; gene_id "g88.t1"; chr2L_476395-484475 database start_codon 3079 3081 . - 0 transcript_id "g88.t1.1"; gene_id "g88.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 14 on both strands # start gene g21 chr2L_476395-484475 AUGUSTUS gene 593 3081 0.55 - . g21 chr2L_476395-484475 AUGUSTUS transcript 593 3081 0.55 - . g21.t1 chr2L_476395-484475 AUGUSTUS stop_codon 593 595 . - 0 transcript_id "g21.t1"; gene_id "g21"; chr2L_476395-484475 AUGUSTUS intron 1811 3012 0.72 - . transcript_id "g21.t1"; gene_id "g21"; chr2L_476395-484475 AUGUSTUS CDS 593 1810 1 - 0 transcript_id "g21.t1"; gene_id "g21"; chr2L_476395-484475 AUGUSTUS CDS 3013 3081 0.55 - 0 transcript_id "g21.t1"; gene_id "g21"; chr2L_476395-484475 AUGUSTUS start_codon 3079 3081 . - 0 transcript_id "g21.t1"; gene_id "g21"; # protein sequence = [MDMDTLLPSPPATPPLRENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNGGIITPNPSDTEDEAPEIAVPNKKPRLE # QPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVSSSSQDENSSSSTSCCSSSSNTNTSTSSVPPTVEDDYPEANVWRNLKFKMNRKRAAEVALPPV # QTPETPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQSPTPVPKTPTMSEEKLTTRITAAQAAATRSRIYECSFPDCGKNY # FKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKANGVNRHVSLANNNTSASVAASL # CDASLHLRAIAPAGSSASSSPISSASLQVYSAQDLLRLQQQASSFTFGGTLLQVQR] # end gene g21 ### # # ----- sequence number 15 (length = 11869, name = chr2L_700859-712727) ----- # # annotation: # Sequence chr2L_700859-712727 length=11869 chr2L_700859-712727 database stop_codon 5001 5003 . - 0 transcript_id "g116.t1.1"; gene_id "g116.t1"; chr2L_700859-712727 database CDS 5001 6869 . - 0 transcript_id "g116.t1.1"; gene_id "g116.t1"; chr2L_700859-712727 database start_codon 6867 6869 . - 0 transcript_id "g116.t1.1"; gene_id "g116.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 15 on both strands # start gene g22 chr2L_700859-712727 AUGUSTUS gene 5001 6869 0.44 - . g22 chr2L_700859-712727 AUGUSTUS transcript 5001 6869 0.44 - . g22.t1 chr2L_700859-712727 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g22.t1"; gene_id "g22"; chr2L_700859-712727 AUGUSTUS CDS 5001 6869 0.44 - 0 transcript_id "g22.t1"; gene_id "g22"; chr2L_700859-712727 AUGUSTUS start_codon 6867 6869 . - 0 transcript_id "g22.t1"; gene_id "g22"; # protein sequence = [MTRVTFTGNHESKDFAIFHRCRRRSNIKSLYSPPALHPSHMLRSSLLILLAIVLLGSSQAASHDQERERKLEVFEGVA # VDYQIGYIGDFGGIDSGPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRETRASYSLVAIPLSGRNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPR # EVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFN # QSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTD # VNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPP # LHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTV # VARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSH] # end gene g22 ### # # ----- sequence number 16 (length = 12922, name = chr2L_733074-745995) ----- # # annotation: # Sequence chr2L_733074-745995 length=12922 chr2L_733074-745995 database stop_codon 5001 5003 . - 0 transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database intron 5196 5247 . - . transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database intron 5363 5434 . - . transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database intron 5765 6371 . - . transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database intron 6942 7283 . - . transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database intron 7618 7726 . - . transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database CDS 5001 5195 . - 0 transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database CDS 5248 5362 . - 1 transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database CDS 5435 5764 . - 1 transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database CDS 6372 6941 . - 1 transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database CDS 7284 7617 . - 2 transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database CDS 7727 7922 . - 0 transcript_id "g118.t1.1"; gene_id "g118.t1"; chr2L_733074-745995 database start_codon 7920 7922 . - 0 transcript_id "g118.t1.1"; gene_id "g118.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 16 on both strands # start gene g23 chr2L_733074-745995 AUGUSTUS gene 1 1053 0.77 + . g23 chr2L_733074-745995 AUGUSTUS transcript 1 1053 0.77 + . g23.t1 chr2L_733074-745995 AUGUSTUS intron 1 886 0.77 + . transcript_id "g23.t1"; gene_id "g23"; chr2L_733074-745995 AUGUSTUS CDS 887 1053 0.78 + 2 transcript_id "g23.t1"; gene_id "g23"; chr2L_733074-745995 AUGUSTUS stop_codon 1051 1053 . + 0 transcript_id "g23.t1"; gene_id "g23"; # protein sequence = [NVFVNSTVIWLDYQAGDDDDDDDDDDDDANDADDVDDATATASGNLHFPLAKGN] # end gene g23 ### # start gene g24 chr2L_733074-745995 AUGUSTUS gene 5001 7874 0.91 - . g24 chr2L_733074-745995 AUGUSTUS transcript 5001 7874 0.91 - . g24.t1 chr2L_733074-745995 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS intron 5196 5247 1 - . transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS intron 5363 5434 0.96 - . transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS intron 5765 6371 0.93 - . transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS intron 6942 7283 1 - . transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS intron 7618 7726 1 - . transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS CDS 5001 5195 1 - 0 transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS CDS 5248 5362 1 - 1 transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS CDS 5435 5764 0.91 - 1 transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS CDS 6372 6941 0.93 - 1 transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS CDS 7284 7617 1 - 2 transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS CDS 7727 7874 1 - 0 transcript_id "g24.t1"; gene_id "g24"; chr2L_733074-745995 AUGUSTUS start_codon 7872 7874 . - 0 transcript_id "g24.t1"; gene_id "g24"; # protein sequence = [MGPPTSTELPPKTTECSDAPVELTGYRRWLSENLMLLVTLSGVLLGVILGLSLRPLNLHGDSIMLISYPGELFMRVLK # LMILPLVISSLIAGSASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNADDRSTDRRAVNLLDSLLDLGRNVFPDNLFQASIQQA # HTVYLPKPSILHVFNETMNDTLASGSEAQRLSEDLTEDVVLVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWL # TPVGISSVIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLTAFATASTAAALPITFRCMNEKLKVDPRI # TRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGFGELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNM # LGDCYTAAVVEELSRKELMALDAASVNYQDMPAGTPNGHGHGHGHHDGGLLEGQTELETSSKCVMTMTDSVVVDISAVMNNVNLQQEHCNRRV] # end gene g24 ### # # ----- sequence number 17 (length = 10360, name = chr2L_774204-784563) ----- # # annotation: # Sequence chr2L_774204-784563 length=10360 chr2L_774204-784563 database start_codon 5001 5003 . + 0 transcript_id "g122.t1.1"; gene_id "g122.t1"; chr2L_774204-784563 database CDS 5001 5360 . + 0 transcript_id "g122.t1.1"; gene_id "g122.t1"; chr2L_774204-784563 database stop_codon 5358 5360 . + 0 transcript_id "g122.t1.1"; gene_id "g122.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 17 on both strands # start gene g25 chr2L_774204-784563 AUGUSTUS gene 2339 2638 1 + . g25 chr2L_774204-784563 AUGUSTUS transcript 2339 2638 1 + . g25.t1 chr2L_774204-784563 AUGUSTUS start_codon 2339 2341 . + 0 transcript_id "g25.t1"; gene_id "g25"; chr2L_774204-784563 AUGUSTUS CDS 2339 2638 1 + 0 transcript_id "g25.t1"; gene_id "g25"; chr2L_774204-784563 AUGUSTUS stop_codon 2636 2638 . + 0 transcript_id "g25.t1"; gene_id "g25"; # protein sequence = [MRSYILIVLFALIALAAAQGGPQGGQQGGQGGPQNGQQGGQQGGSQEGSQGGQQGGQQQGGPGGPWGLPPNGTELSNS # TTTSTTEASTTESSTTDVSSS] # end gene g25 ### # start gene g26 chr2L_774204-784563 AUGUSTUS gene 5001 5360 1 + . g26 chr2L_774204-784563 AUGUSTUS transcript 5001 5360 1 + . g26.t1 chr2L_774204-784563 AUGUSTUS start_codon 5001 5003 . + 0 transcript_id "g26.t1"; gene_id "g26"; chr2L_774204-784563 AUGUSTUS CDS 5001 5360 1 + 0 transcript_id "g26.t1"; gene_id "g26"; chr2L_774204-784563 AUGUSTUS stop_codon 5358 5360 . + 0 transcript_id "g26.t1"; gene_id "g26"; # protein sequence = [MRSFIIIALFALIAVAAAQGGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPGGPGGPGG # PWGLPPNATLPSNSTTTTTTSTTTESSTSTTTEASTESSPA] # end gene g26 ### # start gene g27 chr2L_774204-784563 AUGUSTUS gene 7073 8621 0.69 + . g27 chr2L_774204-784563 AUGUSTUS transcript 7073 8621 0.69 + . g27.t1 chr2L_774204-784563 AUGUSTUS start_codon 7073 7075 . + 0 transcript_id "g27.t1"; gene_id "g27"; chr2L_774204-784563 AUGUSTUS intron 7846 7920 0.99 + . transcript_id "g27.t1"; gene_id "g27"; chr2L_774204-784563 AUGUSTUS intron 7979 8034 0.99 + . transcript_id "g27.t1"; gene_id "g27"; chr2L_774204-784563 AUGUSTUS intron 8239 8291 1 + . transcript_id "g27.t1"; gene_id "g27"; chr2L_774204-784563 AUGUSTUS CDS 7073 7845 0.69 + 0 transcript_id "g27.t1"; gene_id "g27"; chr2L_774204-784563 AUGUSTUS CDS 7921 7978 0.99 + 1 transcript_id "g27.t1"; gene_id "g27"; chr2L_774204-784563 AUGUSTUS CDS 8035 8238 0.99 + 0 transcript_id "g27.t1"; gene_id "g27"; chr2L_774204-784563 AUGUSTUS CDS 8292 8621 1 + 0 transcript_id "g27.t1"; gene_id "g27"; chr2L_774204-784563 AUGUSTUS stop_codon 8619 8621 . + 0 transcript_id "g27.t1"; gene_id "g27"; # protein sequence = [MTFLDRTMSFWAVSRGLTPPSKVVPMLNPNQRQFLEDEVRYREKLKLMARGDAMEEVYVRKQETVDDPLELDKHDSFY # QTTKSLLVLFQIMGVMPIHRNPPEKNLPRTGYSWGSKQVMWAIFIYSCQTTIVVLVLRERVKKFVTSPDKRFDEAIYNVIFISLLFTNFLLPVASWRH # GPQVAIFKNMWTNYQYKFFKTTGSPIVFPNLYPLTWSLCVFSWLLSIAINLSQYFLQPDFRLWYTFAYYPIIAMLNCFCSLWYINCNAFGTASRALSD # ALQTTIRGEKPAQKLTEYRHLWVDLSHMMQQLGRAYSNMYGMYCLVIFFTTIIATYGSISEIIDHGATYKEVGLFVIVFYCMGLLYIICNEAHYASRK # VGLDFQTKLLNINLTAVDAATQKEVEMLLVAINKNPPIMNLDGYANINRELITTNISFMATYLVVLLQFKITEQRRIGQQQA] # end gene g27 ### # # ----- sequence number 18 (length = 3163, name = chr2L_811535-814697) ----- # # annotation: # Sequence chr2L_811535-814697 length=3163 chr2L_811535-814697 database start_codon 102 104 . + 0 transcript_id "g128.t1.1"; gene_id "g128.t1"; chr2L_811535-814697 database intron 963 1027 . + . transcript_id "g128.t1.1"; gene_id "g128.t1"; chr2L_811535-814697 database CDS 102 962 . + 0 transcript_id "g128.t1.1"; gene_id "g128.t1"; chr2L_811535-814697 database CDS 1028 1777 . + 0 transcript_id "g128.t1.1"; gene_id "g128.t1"; chr2L_811535-814697 database stop_codon 1775 1777 . + 0 transcript_id "g128.t1.1"; gene_id "g128.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 18 on both strands # start gene g28 chr2L_811535-814697 AUGUSTUS gene 102 1777 0.9 + . g28 chr2L_811535-814697 AUGUSTUS transcript 102 1777 0.9 + . g28.t1 chr2L_811535-814697 AUGUSTUS start_codon 102 104 . + 0 transcript_id "g28.t1"; gene_id "g28"; chr2L_811535-814697 AUGUSTUS intron 963 1027 0.91 + . transcript_id "g28.t1"; gene_id "g28"; chr2L_811535-814697 AUGUSTUS CDS 102 962 0.94 + 0 transcript_id "g28.t1"; gene_id "g28"; chr2L_811535-814697 AUGUSTUS CDS 1028 1777 0.93 + 0 transcript_id "g28.t1"; gene_id "g28"; chr2L_811535-814697 AUGUSTUS stop_codon 1775 1777 . + 0 transcript_id "g28.t1"; gene_id "g28"; # protein sequence = [MLNLSVVLRVQSSRHVASYATAAAAAVKTKPPKAKSKGKKQKGEPLISCRRSQFDLTQYEQTDAKFGSLSLASKGWLH # NKSKGDFFILNASVRGEELQQEMQTVDEFLESTGMQIHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAETGCGKTITYLLPIVDKLLQKEV # VTERKLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKVQSLLGGNTKQLMMNPQFEEVDILVATLGALSKLVTTGIYRMEQVRHLVLDEADTLLDDT # FTDKLSYFLRRFPFHLVQKEDAGTQMILASATMPTNTREILHKVIDVDTIREVVSPHLHRLMSHVTQKFLRLSKADRPATLLSLVKHDLAKRRPLIVF # SNKSTTSDFVSIFLNNSGVNCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRVGNMDKALVTN # LISSRREIDVVQRIEHAARTGGLLPDVNANIRNIINKRIVAEMKAAGMPVPALGSLNGHTPQEEAF] # end gene g28 ### # start gene g29 chr2L_811535-814697 AUGUSTUS gene 1923 3075 0.39 - . g29 chr2L_811535-814697 AUGUSTUS transcript 1923 3075 0.39 - . g29.t1 chr2L_811535-814697 AUGUSTUS stop_codon 1923 1925 . - 0 transcript_id "g29.t1"; gene_id "g29"; chr2L_811535-814697 AUGUSTUS intron 2360 2416 1 - . transcript_id "g29.t1"; gene_id "g29"; chr2L_811535-814697 AUGUSTUS intron 2651 2708 0.4 - . transcript_id "g29.t1"; gene_id "g29"; chr2L_811535-814697 AUGUSTUS CDS 1923 2359 1 - 2 transcript_id "g29.t1"; gene_id "g29"; chr2L_811535-814697 AUGUSTUS CDS 2417 2650 0.4 - 2 transcript_id "g29.t1"; gene_id "g29"; chr2L_811535-814697 AUGUSTUS CDS 2709 3075 0.49 - 0 transcript_id "g29.t1"; gene_id "g29"; chr2L_811535-814697 AUGUSTUS start_codon 3073 3075 . - 0 transcript_id "g29.t1"; gene_id "g29"; # protein sequence = [MEFEEELKVEPDQCHNPETQENPEVMGVEKQEQEPQMFPGESTMEHTIYKLQSEEEELNPQPEAEHLSSYFACPVGNG # LVDELCETIGQLASQSGYLHAECLFLIKRRLARFFEGRHVSSERDFRYISRAVRGLIALGEYAFREFIPYIYKLRVEEIPDSLWPDLAPAAIFLGGHD # DVYLYEWLEYGCGAALQPFLVHYARAYEKMVTRRYVKAKQPAYRIESVPGVRRLEWSTLAAAMCHGDDPSKALKPKPTLCEAFPDLQSPNLQLNCAGN # IRFKFAGCRPVLLKPKVATVPHSEDSPSSAANGGGGGGASSDILIAKRKLFKPLTNVRKWSPISGYHYLRI] # end gene g29 ### # # ----- sequence number 19 (length = 1965, name = chr2L_817742-819706) ----- # # annotation: # Sequence chr2L_817742-819706 length=1965 chr2L_817742-819706 database stop_codon 766 768 . - 0 transcript_id "g132.t1.1"; gene_id "g132.t1"; chr2L_817742-819706 database intron 903 962 . - . transcript_id "g132.t1.1"; gene_id "g132.t1"; chr2L_817742-819706 database CDS 766 902 . - 2 transcript_id "g132.t1.1"; gene_id "g132.t1"; chr2L_817742-819706 database CDS 963 1593 . - 0 transcript_id "g132.t1.1"; gene_id "g132.t1"; chr2L_817742-819706 database start_codon 1591 1593 . - 0 transcript_id "g132.t1.1"; gene_id "g132.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 19 on both strands # start gene g30 chr2L_817742-819706 AUGUSTUS gene 766 1593 0.74 - . g30 chr2L_817742-819706 AUGUSTUS transcript 766 1593 0.74 - . g30.t1 chr2L_817742-819706 AUGUSTUS stop_codon 766 768 . - 0 transcript_id "g30.t1"; gene_id "g30"; chr2L_817742-819706 AUGUSTUS intron 903 962 0.74 - . transcript_id "g30.t1"; gene_id "g30"; chr2L_817742-819706 AUGUSTUS CDS 766 902 0.74 - 2 transcript_id "g30.t1"; gene_id "g30"; chr2L_817742-819706 AUGUSTUS CDS 963 1593 0.74 - 0 transcript_id "g30.t1"; gene_id "g30"; chr2L_817742-819706 AUGUSTUS start_codon 1591 1593 . - 0 transcript_id "g30.t1"; gene_id "g30"; # protein sequence = [MLPTYERFSDPKSVLFRLPFARLALVALSLPLGGFFFCVIWSLTFDFVRSTYTHCDVTNYLPSVSAAIGNYEPQKTVW # RLAIFLHLPLRLAVAKIYLEHYREHIRRSRRLLGILACFLNVVEDLALFCLSFWTSADHYETHRNAFVVFIACSECYMLVSYLLNRNIQKTVLLPHEE # KSLRYKRNLFLVNVIAFGLAGYCFVRHNSHCEAGVYTFFALFEYIVVLTNMGFHMTSYWDFYALNVVCDAKHGLYLSQS] # end gene g30 ### # # ----- sequence number 20 (length = 9170, name = chr2L_829735-838904) ----- # # annotation: # Sequence chr2L_829735-838904 length=9170 chr2L_829735-838904 database start_codon 3913 3915 . + 0 transcript_id "g138.t1.1"; gene_id "g138.t1"; chr2L_829735-838904 database CDS 3913 4170 . + 0 transcript_id "g138.t1.1"; gene_id "g138.t1"; chr2L_829735-838904 database stop_codon 4168 4170 . + 0 transcript_id "g138.t1.1"; gene_id "g138.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 20 on both strands # start gene g31 chr2L_829735-838904 AUGUSTUS gene 1 2189 0.81 + . g31 chr2L_829735-838904 AUGUSTUS transcript 1 2189 0.81 + . g31.t1 chr2L_829735-838904 AUGUSTUS intron 238 410 0.82 + . transcript_id "g31.t1"; gene_id "g31"; chr2L_829735-838904 AUGUSTUS intron 616 1003 0.99 + . transcript_id "g31.t1"; gene_id "g31"; chr2L_829735-838904 AUGUSTUS intron 1350 1442 1 + . transcript_id "g31.t1"; gene_id "g31"; chr2L_829735-838904 AUGUSTUS intron 1893 1979 1 + . transcript_id "g31.t1"; gene_id "g31"; chr2L_829735-838904 AUGUSTUS CDS 1 237 0.82 + 2 transcript_id "g31.t1"; gene_id "g31"; chr2L_829735-838904 AUGUSTUS CDS 411 615 0.99 + 2 transcript_id "g31.t1"; gene_id "g31"; chr2L_829735-838904 AUGUSTUS CDS 1004 1349 1 + 1 transcript_id "g31.t1"; gene_id "g31"; chr2L_829735-838904 AUGUSTUS CDS 1443 1892 1 + 0 transcript_id "g31.t1"; gene_id "g31"; chr2L_829735-838904 AUGUSTUS CDS 1980 2189 1 + 0 transcript_id "g31.t1"; gene_id "g31"; chr2L_829735-838904 AUGUSTUS stop_codon 2187 2189 . + 0 transcript_id "g31.t1"; gene_id "g31"; # protein sequence = [HHQRHSSLSQQQQLHHHRTLSTASSCSAQHKSVTFGQPALDCGGNGSGSANGSGSGNSSSGSAAGNAGTQSMAGNMKH # GKSQDDVCYVVAKYDYAAQGAQELDLRKNERYLLLDDSKHWWRVQNSRNQSGYVPSNYVKKEKPSLFDSIKKKVKKGSGSKTLPNCSPSRQVESPTMS # RRLPPDPAEAIGTAVVKYNYQAQQPDELSLTKGTRILILEKSNDGWWRGQSGNSVGWFPSNYTTEDCDNDGEIHTYAMAENVLDIVVALYSFTSNNDQ # ELSFEKGDRLEIVDRPASDPDWYKARNNQGQVGLVPRNYLQELNDYLATPYRNASASAGNGNGGGSNGGAGGGGGNDSMERRNEGNKPAAQSSGQPIE # RPNLAGKSWYYGAITRSQCDTVLNGHGHDGDFLIRDSETNMGDYSVSLKAPGRNKHFRVHVEQNMYCIGQRKFHSLDQLVDHYQRAPIYTNKQGEKLY # LVRSLPKANGT] # end gene g31 ### # start gene g32 chr2L_829735-838904 AUGUSTUS gene 4811 9170 0.69 - . g32 chr2L_829735-838904 AUGUSTUS transcript 4811 9170 0.69 - . g32.t1 chr2L_829735-838904 AUGUSTUS stop_codon 4811 4813 . - 0 transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS intron 4850 5239 0.84 - . transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS intron 5557 5618 1 - . transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS intron 5814 5969 1 - . transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS intron 6438 6811 1 - . transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS intron 7645 9170 0.85 - . transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS CDS 4811 4849 0.84 - 0 transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS CDS 5240 5556 0.96 - 2 transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS CDS 5619 5813 1 - 2 transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS CDS 5970 6437 1 - 2 transcript_id "g32.t1"; gene_id "g32"; chr2L_829735-838904 AUGUSTUS CDS 6812 7644 0.86 - 1 transcript_id "g32.t1"; gene_id "g32"; # protein sequence = [RGLTPPHRVKSISMATFTQDEIDFLRSHGNELCAKTWLGLWDPKRAVHQQEQRELMMDKYERKRYYLEPASPLKSLAN # AVNLKSSAPATNHTQNGHQNGYASIHLTPPAAQRTSANGLQKVANSSSNSSGKTSSSISRPHYNHQNNSQNNNHDAFGLGGGLSSLNSAGSTSTGALS # DTSSCASNGFGADCDFVADFGSANIFDATSARSTGSPAVSSVSSVGSSNGYAKVQPIRAAHLQQQQQLQQQLHQQQLLNGNGHQGTENFADFDHAPIY # NAVAPPTFNDWISDWSRRGFHDPFDDCDDSPPGARPPAPAPAPAQVPAVSSPLPTVREEPELAWNFWEDEMRIEAQEKESQTKQPELGYSFSISTTTP # LSPSNPFLPYLVSEEQHRNHPEKPSFSYSLFSSISNSSQEDQADDHEMNVLNANFHDFFTWSAPLQNGHTTSPPKGGNAAMAPSEDRYAALKDLDEQL # RELKASESATETPTPTSGNVQATDAFGGALNNNPNPFKGQQQQQLSSHVVNPFQQQQQQQHQQNLYGQLTLIPNAYGSSSQQQMGHHLLQQQQQQQQS # FFNFNNNGFAISQGLPNGCGFGSMQPAPVMANNPFAASGAMNTNNPFL] # end gene g32 ### # # ----- sequence number 21 (length = 6138, name = chr2L_1005525-1011662) ----- # # annotation: # Sequence chr2L_1005525-1011662 length=6138 chr2L_1005525-1011662 database stop_codon 5001 5003 . - 0 transcript_id "g160.t1.1"; gene_id "g160.t1"; chr2L_1005525-1011662 database CDS 5001 5306 . - 0 transcript_id "g160.t1.1"; gene_id "g160.t1"; chr2L_1005525-1011662 database start_codon 5304 5306 . - 0 transcript_id "g160.t1.1"; gene_id "g160.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 21 on both strands # (none) # # ----- sequence number 22 (length = 9685, name = chr2L_1037923-1047607) ----- # # annotation: # Sequence chr2L_1037923-1047607 length=9685 chr2L_1037923-1047607 database start_codon 5001 5003 . + 0 transcript_id "g166.t1.1"; gene_id "g166.t1"; chr2L_1037923-1047607 database CDS 5001 5255 . + 0 transcript_id "g166.t1.1"; gene_id "g166.t1"; chr2L_1037923-1047607 database stop_codon 5253 5255 . + 0 transcript_id "g166.t1.1"; gene_id "g166.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 22 on both strands # start gene g33 chr2L_1037923-1047607 AUGUSTUS gene 1 500 1 + . g33 chr2L_1037923-1047607 AUGUSTUS transcript 1 500 1 + . g33.t1 chr2L_1037923-1047607 AUGUSTUS CDS 1 500 1 + 2 transcript_id "g33.t1"; gene_id "g33"; chr2L_1037923-1047607 AUGUSTUS stop_codon 498 500 . + 0 transcript_id "g33.t1"; gene_id "g33"; # protein sequence = [REVSKQSRGERKARRILMKLDLKPMENVARVTMKKGKNILLYIDQPDVYRVAHSSTYIFFGEICVEDTSTTSVASQAA # VKAAERFRGTSPAGRQGNEDGKAPGEESPHDDDDDENDGEDADAMGLHAKDIELVQMQAACSRKKAIQALLKNDNDVVNAIMALTVG] # end gene g33 ### # # ----- sequence number 23 (length = 6894, name = chr2L_1080978-1087871) ----- # # annotation: # Sequence chr2L_1080978-1087871 length=6894 chr2L_1080978-1087871 database start_codon 267 269 . + 0 transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database intron 451 600 . + . transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database intron 944 999 . + . transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database intron 1080 1142 . + . transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database intron 1689 1811 . + . transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database CDS 267 450 . + 0 transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database CDS 601 943 . + 2 transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database CDS 1000 1079 . + 1 transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database CDS 1143 1688 . + 2 transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database CDS 1812 1894 . + 2 transcript_id "g170.t1.1"; gene_id "g170.t1"; chr2L_1080978-1087871 database stop_codon 1892 1894 . + 0 transcript_id "g170.t1.1"; gene_id "g170.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 23 on both strands # start gene g34 chr2L_1080978-1087871 AUGUSTUS gene 267 1894 0.85 + . g34 chr2L_1080978-1087871 AUGUSTUS transcript 267 1894 0.85 + . g34.t1 chr2L_1080978-1087871 AUGUSTUS start_codon 267 269 . + 0 transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS intron 451 600 1 + . transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS intron 944 999 1 + . transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS intron 1080 1142 1 + . transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS intron 1689 1811 0.97 + . transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS CDS 267 450 0.88 + 0 transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS CDS 601 943 1 + 2 transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS CDS 1000 1079 1 + 1 transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS CDS 1143 1688 0.98 + 2 transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS CDS 1812 1894 0.97 + 2 transcript_id "g34.t1"; gene_id "g34"; chr2L_1080978-1087871 AUGUSTUS stop_codon 1892 1894 . + 0 transcript_id "g34.t1"; gene_id "g34"; # protein sequence = [MLVGLSDQLARIMESVFEAYLGPDSVLASAVGQAVGSGEPEDIPRRNTDVWVLGKKYNAIQELELIRRDIQSRLWCTY # RHGFSPLGEVQLTTDKGWGCMLRCGQMVLAQALIDLHLGRDWFWTPDCRDATYLKIVNRFEDVRNSFYSIHQIAQMGESQNKAVGEWLGPNTVAQILK # KLVRFDDWSSLAIHVAMDSTVVLDDVYASCREGGSWKPLLLIIPLRLGITDINPLYVPALKRCLELDSSCGMIGGRPNQALYFLGYVDDEVLYLDPHT # TQRTGAVAQKTAAAEQDYDETYHQKHAARLNFSAMDPSLAVCFLCKTSDSFESLLTKLKEEVLSLCSPALFEISQTRAVDWDTTEDIDWPTMPDIDWP # AGTSDSDSFAIVEESGRDSDAGCSGAIGSGKKPSERAVI] # end gene g34 ### # start gene g35 chr2L_1080978-1087871 AUGUSTUS gene 3042 6894 0.6 - . g35 chr2L_1080978-1087871 AUGUSTUS transcript 3042 6894 0.6 - . g35.t1 chr2L_1080978-1087871 AUGUSTUS stop_codon 3042 3044 . - 0 transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS intron 3860 3916 1 - . transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS intron 4160 4217 0.63 - . transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS intron 4333 4546 1 - . transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS intron 4704 4766 1 - . transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS intron 4885 4949 0.96 - . transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS intron 5050 6717 1 - . transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS CDS 3042 3859 1 - 2 transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS CDS 3917 4159 1 - 2 transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS CDS 4218 4332 0.63 - 0 transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS CDS 4547 4703 1 - 1 transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS CDS 4767 4884 1 - 2 transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS CDS 4950 5049 0.96 - 0 transcript_id "g35.t1"; gene_id "g35"; chr2L_1080978-1087871 AUGUSTUS CDS 6718 6894 1 - 0 transcript_id "g35.t1"; gene_id "g35"; # protein sequence = [TKALRSSATVKVTSAATPPHPPPLTTTTTPLTICQPPPPTPPYQRLTKALQCDPRCGHEVTIGRRIGLYRFCGDIGRG # NFSKVKLAVHQLTRDKVAIKVVDLDRAGLDAKALRMLSSEIATLECVHHPNILRLFEVVETLGRVYLVTEWIRGGELYNHITQGGPLREIHAAPLLKQ # LLLAVKHMHSLGYVHRDIKAENVLLLSEDRLKLADFGFSTQLINGTGANQKLDTFCGSPPYAAPELFSDDHYIGAPVDVWALGILLYFMVVGNMPFRA # PTIPGLKAAILKGDYLLPGQLSLPCIRLIQRILIHIPAQRPTIDDMLNSQFVTCPKLSADLMQWEINQHTKPVKRSIFWVRSKSHRLRKSASLRDRYA # EVVKKPAISMNTRQQDEMFVQNFLQPIEMGHELLVPVSSQLKEPQSTEQAKRPTRRYMFCGSLKKKVTPMETEPEKQLANGGQSIGSAKINPWNVEVA # EDCPLFKNYDAETGSCVMLPTNTEDLSQLGALEFEARQILAELGLTSEMLINARQSGPRSDIIGAYRIVVNRLQKQSWLARKHVEMALHSEPKVEKRI # ERSCCIL] # end gene g35 ### # # ----- sequence number 24 (length = 8691, name = chr2L_1111430-1120120) ----- # # annotation: # Sequence chr2L_1111430-1120120 length=8691 chr2L_1111430-1120120 database start_codon 3389 3391 . + 0 transcript_id "g175.t1.1"; gene_id "g175.t1"; chr2L_1111430-1120120 database CDS 3389 3691 . + 0 transcript_id "g175.t1.1"; gene_id "g175.t1"; chr2L_1111430-1120120 database stop_codon 3689 3691 . + 0 transcript_id "g175.t1.1"; gene_id "g175.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 24 on both strands # start gene g36 chr2L_1111430-1120120 AUGUSTUS gene 1 2353 0.25 + . g36 chr2L_1111430-1120120 AUGUSTUS transcript 1 2353 0.25 + . g36.t1 chr2L_1111430-1120120 AUGUSTUS intron 1 76 0.81 + . transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS intron 539 598 1 + . transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS intron 1016 1076 1 + . transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS intron 1176 1774 0.67 + . transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS intron 2073 2129 1 + . transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS CDS 77 538 0.81 + 0 transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS CDS 599 1015 1 + 0 transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS CDS 1077 1175 0.67 + 0 transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS CDS 1775 2072 1 + 0 transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS CDS 2130 2353 0.48 + 2 transcript_id "g36.t1"; gene_id "g36"; chr2L_1111430-1120120 AUGUSTUS stop_codon 2351 2353 . + 0 transcript_id "g36.t1"; gene_id "g36"; # protein sequence = [TAPDCTECLLRSITNYAERYPRQQDAWILLYCYYKRFNYEPGCAFALWRFGDQHGHCRLSSSSNAPHSLWGLYVNLNI # TIPTSRGTMFLEVFRTFARLGLYEFAQVVIAAVLPLASDADRYMLQTQLDMMLNQLDENFVPLSFEFEEGEEGDYSAAMNAQINGNVEFQRGNLEEAA # LYYESALTLPPPEVNERDFFEVSRLRLGYISYELGNYNKCIEALSFPFAGQLLSIVANYMIGKSYYKLDLLDLALESFANATHMDTHVPNVWGFLALI # NLRLGENYKAIECWKYAKIEPNYPIDDMMIYEELDAIDYDSVDLYIDAPNQMLITEINCYVAQFRELLIFIGQARDSPELREKIRKLRRSCVDACKHT # AHLITPQPRHCLGSPSERMHLTLLYHLTLQFQHELIKSHRLIQLVPLDMTEYYAPSRTAPSNLGNVISQFLLCKQINPDFQQEELCSIVKDSQELSEL # LEELQAHMPLTEASPEFDLDPTQKCESVV] # end gene g36 ### # start gene g37 chr2L_1111430-1120120 AUGUSTUS gene 4305 6070 0.91 - . g37 chr2L_1111430-1120120 AUGUSTUS transcript 4305 6070 0.91 - . g37.t1 chr2L_1111430-1120120 AUGUSTUS stop_codon 4305 4307 . - 0 transcript_id "g37.t1"; gene_id "g37"; chr2L_1111430-1120120 AUGUSTUS intron 4515 5011 1 - . transcript_id "g37.t1"; gene_id "g37"; chr2L_1111430-1120120 AUGUSTUS intron 5262 6014 0.92 - . transcript_id "g37.t1"; gene_id "g37"; chr2L_1111430-1120120 AUGUSTUS CDS 4305 4514 1 - 0 transcript_id "g37.t1"; gene_id "g37"; chr2L_1111430-1120120 AUGUSTUS CDS 5012 5261 1 - 1 transcript_id "g37.t1"; gene_id "g37"; chr2L_1111430-1120120 AUGUSTUS CDS 6015 6070 0.91 - 0 transcript_id "g37.t1"; gene_id "g37"; chr2L_1111430-1120120 AUGUSTUS start_codon 6068 6070 . - 0 transcript_id "g37.t1"; gene_id "g37"; # protein sequence = [MSIASVHGPQIADICSPLSHHNLGLSASLPDLVGSPLEISMDNVLTIEELRQHMGSCFTCGVSWTDDHVSLDCSECGG # YSLERPCPLCDGQCGVQWKRDFAMSHACSQARWVGVCISYPEVVAGVQLPVGAGAGAATSCAAAAANQLRLAQELCSRLEQLSTSTASKSGRI] # end gene g37 ### # # ----- sequence number 25 (length = 6632, name = chr2L_1142814-1149445) ----- # # annotation: # Sequence chr2L_1142814-1149445 length=6632 chr2L_1142814-1149445 database start_codon 5001 5003 . + 0 transcript_id "g182.t1.1"; gene_id "g182.t1"; chr2L_1142814-1149445 database CDS 5001 6563 . + 0 transcript_id "g182.t1.1"; gene_id "g182.t1"; chr2L_1142814-1149445 database stop_codon 6561 6563 . + 0 transcript_id "g182.t1.1"; gene_id "g182.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 25 on both strands # start gene g38 chr2L_1142814-1149445 AUGUSTUS gene 558 4262 0.56 + . g38 chr2L_1142814-1149445 AUGUSTUS transcript 558 4262 0.56 + . g38.t1 chr2L_1142814-1149445 AUGUSTUS start_codon 558 560 . + 0 transcript_id "g38.t1"; gene_id "g38"; chr2L_1142814-1149445 AUGUSTUS intron 598 2630 0.61 + . transcript_id "g38.t1"; gene_id "g38"; chr2L_1142814-1149445 AUGUSTUS intron 3660 3725 1 + . transcript_id "g38.t1"; gene_id "g38"; chr2L_1142814-1149445 AUGUSTUS intron 4013 4079 1 + . transcript_id "g38.t1"; gene_id "g38"; chr2L_1142814-1149445 AUGUSTUS CDS 558 597 0.63 + 0 transcript_id "g38.t1"; gene_id "g38"; chr2L_1142814-1149445 AUGUSTUS CDS 2631 3659 0.9 + 2 transcript_id "g38.t1"; gene_id "g38"; chr2L_1142814-1149445 AUGUSTUS CDS 3726 4012 1 + 2 transcript_id "g38.t1"; gene_id "g38"; chr2L_1142814-1149445 AUGUSTUS CDS 4080 4262 1 + 0 transcript_id "g38.t1"; gene_id "g38"; chr2L_1142814-1149445 AUGUSTUS stop_codon 4260 4262 . + 0 transcript_id "g38.t1"; gene_id "g38"; # protein sequence = [MTDEVPAKGSILGKLVPARYVLALLGSIGMAIVYGLKVNLSVAMVAMVNHTAIKAHGDGGGHGGHGSVILSNASQVSL # VEECNPPGGASNVTAKVEDGPFDWSEPLQGTLLSCYFWGYLVSQIPLAHVAENFSAKWVMLFSVAINVVCTLLTPVFTELHYGGLILMRVLEGVGGGA # SFPAMHVMIASWAPPTERMVMSTIIYVGTSAGTALSILLAGVCSAQWGWESVFYVMGALSCIWMLLWVILVQDNPNKQRFISLEERQMITSSLGTEQK # TEHHPAVPWGKVFTSVPFWAILIAHTCSNFGWYMFLIEIPFYMKQVLKFNVASNAALSALPYFPMIIFSICLGKLLDSLQAKGKITTTVARKTATSIC # TLIPGVCLLVLCYIGCRHYEAVSVMSVGIVAMGSMFSGFLSNHIDIAPNFAGTLVALTNTAATLPGIVVPLFVGFVTKGNQNIGAWRIIFGVTIVLFA # LEFLVFVFLGSGSEQPWNKAGTPKDPEAKDEKTPLKELPTKP] # end gene g38 ### # start gene g39 chr2L_1142814-1149445 AUGUSTUS gene 5052 6563 0.98 + . g39 chr2L_1142814-1149445 AUGUSTUS transcript 5052 6563 0.98 + . g39.t1 chr2L_1142814-1149445 AUGUSTUS start_codon 5052 5054 . + 0 transcript_id "g39.t1"; gene_id "g39"; chr2L_1142814-1149445 AUGUSTUS CDS 5052 6563 0.98 + 0 transcript_id "g39.t1"; gene_id "g39"; chr2L_1142814-1149445 AUGUSTUS stop_codon 6561 6563 . + 0 transcript_id "g39.t1"; gene_id "g39"; # protein sequence = [MLKARNVCLLSRRWKSGAKKRWNVLQNKKNNCDRALENFDDFYGSVYGTRWKNMRAALLTRHKYVALVNNFGDTEQTC # AMLESDGAINMKSLINLAQDRVKDSTETVPEQGKSRHEIESKLDALLRKQQEREVASIYPSSPEDGSSAPLPLELKFDNVEEDQPEQVNNPFKQSLTK # ALEEDVKLDEHRLVDPQFGTGGLYEYMPAHSIKGMEDWVAESEHYKYYQTSADFPLAIEPEPSFHYPEHLSLYTYEMGNCSDFKGPKKCMTGVLSHFM # MDGASTLPPLFLQVKPGERVLDACASPGGKSLLMLQTLHLDHLVCNDIQESRLNKLRKVMQEYLFDYKERWAGKRLILSQSDARNLDQYEQFDKILVD # VPCTTDRHVLNEQDNNIFKPTRIKERLRIPELQAGILANCLRLLRPGGSLVYSTCSLSPIQNDGVVHMALQKVFTEYGITTTIKDLSRHTALFSDVFK # FEHPKGLKYGQMVVPYLPANFGPMYFSKITRNV] # end gene g39 ### # # ----- sequence number 26 (length = 2807, name = chr2L_1167203-1170009) ----- # # annotation: # Sequence chr2L_1167203-1170009 length=2807 chr2L_1167203-1170009 database stop_codon 41 43 . - 0 transcript_id "g192.t1.1"; gene_id "g192.t1"; chr2L_1167203-1170009 database intron 753 809 . - . transcript_id "g192.t1.1"; gene_id "g192.t1"; chr2L_1167203-1170009 database intron 1437 1492 . - . transcript_id "g192.t1.1"; gene_id "g192.t1"; chr2L_1167203-1170009 database intron 2360 2425 . - . transcript_id "g192.t1.1"; gene_id "g192.t1"; chr2L_1167203-1170009 database CDS 41 752 . - 1 transcript_id "g192.t1.1"; gene_id "g192.t1"; chr2L_1167203-1170009 database CDS 810 1436 . - 1 transcript_id "g192.t1.1"; gene_id "g192.t1"; chr2L_1167203-1170009 database CDS 1493 2359 . - 1 transcript_id "g192.t1.1"; gene_id "g192.t1"; chr2L_1167203-1170009 database CDS 2426 2583 . - 0 transcript_id "g192.t1.1"; gene_id "g192.t1"; chr2L_1167203-1170009 database start_codon 2581 2583 . - 0 transcript_id "g192.t1.1"; gene_id "g192.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 26 on both strands # start gene g40 chr2L_1167203-1170009 AUGUSTUS gene 41 2583 0.97 - . g40 chr2L_1167203-1170009 AUGUSTUS transcript 41 2583 0.97 - . g40.t1 chr2L_1167203-1170009 AUGUSTUS stop_codon 41 43 . - 0 transcript_id "g40.t1"; gene_id "g40"; chr2L_1167203-1170009 AUGUSTUS intron 753 809 1 - . transcript_id "g40.t1"; gene_id "g40"; chr2L_1167203-1170009 AUGUSTUS intron 1437 1492 0.99 - . transcript_id "g40.t1"; gene_id "g40"; chr2L_1167203-1170009 AUGUSTUS intron 2360 2425 1 - . transcript_id "g40.t1"; gene_id "g40"; chr2L_1167203-1170009 AUGUSTUS CDS 41 752 0.98 - 1 transcript_id "g40.t1"; gene_id "g40"; chr2L_1167203-1170009 AUGUSTUS CDS 810 1436 0.99 - 1 transcript_id "g40.t1"; gene_id "g40"; chr2L_1167203-1170009 AUGUSTUS CDS 1493 2359 0.99 - 1 transcript_id "g40.t1"; gene_id "g40"; chr2L_1167203-1170009 AUGUSTUS CDS 2426 2583 1 - 0 transcript_id "g40.t1"; gene_id "g40"; chr2L_1167203-1170009 AUGUSTUS start_codon 2581 2583 . - 0 transcript_id "g40.t1"; gene_id "g40"; # protein sequence = [MEPSLDNYKLSCELLGHSMDVRAVAVGPPTPEGRQTILSGSRDKSTKVWKPHGNEYLESLTLQDHKNFISYICFLESE # RWICTASNDATICIYKQDGFVPLLTLKGHESTVCALSAGLEPRSLISGSWDKTARVWTISEAGDVSFVALEGHEAAVWAVATLKEQRKYVTGGADRNI # YYWNAKGEKLRLLKGHTDCVRGVMGLDANTLLSCGNDAVLRFWNEDGECVREMNGHSNYIYSMARNEALGDQVVVSCGEDSTLRMWNVITGDELGAPI # IHPGISVWSVTCLQNGDIVTGCSDGVVRVFSHVPARQASEAVLKAFDLVVATRKSQINEEIGGVKKTDLPGPEALLSNGTREGQTKMVRHADGSVKCY # TWTLGNWNLVGDVTGATGGTQSNSGKKLHEGKEYDFVFSVDISDTEPPIKLPYNRSDDPWQAAQTFIHRHSLPQAYLDQVANFIIKNSEGPVLMEQAP # TGYQDPFTGGSRYVPGSSNTNMGSGGNVDPFTGASSYSTASSNAQSQVDVNFVRSGDKHFPVSNYRIFDTCDAKKVLEKMIEFNGKLSLPDGRVGEEV # LLAVIKLADQSPELDLTSLEALAILLKWPASMQFPVLDILRLAVRNEAIFSVLNNSHNFLATVIPQLSGSAPNQLMVVRCLANIMSHAAGRQNVMSRL # AEIIDLVGAIKTGSANLQIAVATFYLNLTISQTLDVAKSEVCHVVTSGIVELLKWAKDLEACYRSMQAIGNLTTTSCGQETIAQVVSVDYVMDKLREL # TITPQDKNFSKVNSVGQALLAVF] # end gene g40 ### # # ----- sequence number 27 (length = 7106, name = chr2L_1175285-1182390) ----- # # annotation: # Sequence chr2L_1175285-1182390 length=7106 chr2L_1175285-1182390 database start_codon 2666 2668 . + 0 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 2761 2823 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 3184 3556 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 3786 3842 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 3913 4167 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 4242 4575 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 4654 4712 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 4840 4928 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 5166 5228 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 5643 5710 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 6510 6570 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database intron 6821 6885 . + . transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 2666 2760 . + 0 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 2824 3183 . + 1 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 3557 3785 . + 1 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 3843 3912 . + 0 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 4168 4241 . + 2 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 4576 4653 . + 0 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 4713 4839 . + 0 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 4929 5165 . + 2 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 5229 5642 . + 2 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 5711 6509 . + 2 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 6571 6820 . + 1 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database CDS 6886 7002 . + 0 transcript_id "g196.t1.1"; gene_id "g196.t1"; chr2L_1175285-1182390 database stop_codon 7000 7002 . + 0 transcript_id "g196.t1.1"; gene_id "g196.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 27 on both strands # start gene g41 chr2L_1175285-1182390 AUGUSTUS gene 1 2088 0.63 + . g41 chr2L_1175285-1182390 AUGUSTUS transcript 1 2088 0.63 + . g41.t1 chr2L_1175285-1182390 AUGUSTUS intron 240 294 1 + . transcript_id "g41.t1"; gene_id "g41"; chr2L_1175285-1182390 AUGUSTUS intron 760 816 1 + . transcript_id "g41.t1"; gene_id "g41"; chr2L_1175285-1182390 AUGUSTUS intron 1598 1657 1 + . transcript_id "g41.t1"; gene_id "g41"; chr2L_1175285-1182390 AUGUSTUS intron 1908 1971 0.9 + . transcript_id "g41.t1"; gene_id "g41"; chr2L_1175285-1182390 AUGUSTUS CDS 1 239 0.72 + 1 transcript_id "g41.t1"; gene_id "g41"; chr2L_1175285-1182390 AUGUSTUS CDS 295 759 1 + 2 transcript_id "g41.t1"; gene_id "g41"; chr2L_1175285-1182390 AUGUSTUS CDS 817 1597 1 + 2 transcript_id "g41.t1"; gene_id "g41"; chr2L_1175285-1182390 AUGUSTUS CDS 1658 1907 1 + 1 transcript_id "g41.t1"; gene_id "g41"; chr2L_1175285-1182390 AUGUSTUS CDS 1972 2088 0.9 + 0 transcript_id "g41.t1"; gene_id "g41"; chr2L_1175285-1182390 AUGUSTUS stop_codon 2086 2088 . + 0 transcript_id "g41.t1"; gene_id "g41"; # protein sequence = [EIMLRNLDALTNEEAVLTALQLHLKDLSKTVSKVLISRDSLTQASRGICYLHFDTLVDSMNVHNALTALDPPLTLDDR # VVAITYCIDLEEQQALPKNPKELAVKDSTVNSGNISAVSPSGLGGNYTLADVPRLAEYSASLYASNPAEHAYYVQYYTEYYTADINKNNRDSHLTEAN # SGAAVALSAIQRKQKKMSSIETTITAAATAAAQAAAQVKATLAAQVASAPKGNDGKIYPTPDVTQYQYDETSGYYYDSTTGLYYNAHSQYYYNNETGA # YLYWDQRRSTYVLATPASTQAALQEVLADAEQKGEEESKKAKEKEGGNKHDKVKVAKKIVKDMEKWAKQLNQKKDYTAVATPQPILANEVATTSRGNQ # GGYADVGFSILEKKERGKLNDYAPNPTVGPMNKLVNAYGGTSDSEEDNAASSQNTQSSAVVSGGGGAEESDYVDFHKLTCLLCKRAFQSLEILQKHLK # MSTLHKENLAKLNQNTSSSIEEALAYRDRAKERRLKYGESDPPPPNRSRERFEQEIKTLQSRQKQSTSATPAMPISSSNVGSRLLQKMGWSEGQGLGR # KNQGRTQIIEADGRSNYVGLGNKSGQMIPGNDYKSYIKKMMKQRYENA] # end gene g41 ### # start gene g42 chr2L_1175285-1182390 AUGUSTUS gene 2666 7002 0.43 + . g42 chr2L_1175285-1182390 AUGUSTUS transcript 2666 7002 0.43 + . g42.t1 chr2L_1175285-1182390 AUGUSTUS start_codon 2666 2668 . + 0 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS intron 2761 2823 1 + . transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS intron 3184 3556 1 + . transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS intron 3786 3842 0.99 + . transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS intron 3913 4928 0.43 + . transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS intron 5166 5228 1 + . transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS intron 5643 5710 1 + . transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS intron 6510 6570 1 + . transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS intron 6821 6885 1 + . transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS CDS 2666 2760 1 + 0 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS CDS 2824 3183 1 + 1 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS CDS 3557 3785 1 + 1 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS CDS 3843 3912 0.95 + 0 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS CDS 4929 5165 0.99 + 2 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS CDS 5229 5642 1 + 2 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS CDS 5711 6509 1 + 2 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS CDS 6571 6820 1 + 1 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS CDS 6886 7002 1 + 0 transcript_id "g42.t1"; gene_id "g42"; chr2L_1175285-1182390 AUGUSTUS stop_codon 7000 7002 . + 0 transcript_id "g42.t1"; gene_id "g42"; # protein sequence = [MDSRYGHSFSGGNGNGSESGYRRYSRSRSRSRERSRDRNEYRRRNSRSRSRERSSHYRNDRSPDRDLYRDLINEDYED # QGNYNSRQNLDQRHGEDKYDRRHADSQGRRDHDSNYDKSGQDMDKDRDHRWKNYDRVSRERNHDDFDRGSERSSRSNDQRQFNNNGNSNSSSSYRDRE # KERDRDRRCSSDEDSDMASEFRQRGAYNSGSSVEPLNNIILFGLKKHVTEADIMGELIKVDLEPTSIRVMRKQQTEIMLRGLDALTNEEGVLTALQQR # LPELAKTVSKVLVSRDALTNASRGICYLNFDTLIDSMNVFNGLTALDPPLTLDDKTVIVTYCIDSENRQMMPAEGNFFRAGETAMSPSAITAAYTLAD # VPRLAEYSASVYASNPLEHANYVQYYTDYYTTEISKNCRDRQVTEANSGAAVALSAIQRKQRKVSQMETTVSVTEAKVAFLARGESAPKGNDGKKYDT # PDVSKYQYDETSGYYYDHVTGLYYDAHSQYYYNNETGAYLYWDQKRSTYVLATPASTQAALKEVLADAEKKEEEAKKAKEKEKEKEEAGGKPDKVKVA # KKIVKDMEKWAKQLNQKKDYTAVATPQPILSDTEAATTSRASQGAYADVGFSILEKKELGKLNDYVPEAGPPAISKLVGAYGGPSDSEDDNSANQKAL # EASVGTKRAISDESDYVDFQKLTCLLCMRAFQSLDILQKHLKMSNLHKENLDKLKRNPAVEAGTDEGLSYRDRAKERRLKYGESDPPPPNRSRERFEQ # EIKTLQSRQKDSFGATAAMPISSTNVGSRLMQKMGWSEGQGLGKKNQGRTEIIEADGRSNNVGLGNNTGHMAPGNDYKSYIKKMMKQRYENA] # end gene g42 ### # # ----- sequence number 28 (length = 12078, name = chr2L_1235068-1247145) ----- # # annotation: # Sequence chr2L_1235068-1247145 length=12078 chr2L_1235068-1247145 database start_codon 5001 5003 . + 0 transcript_id "g205.t1.1"; gene_id "g205.t1"; chr2L_1235068-1247145 database intron 5904 5983 . + . transcript_id "g205.t1.1"; gene_id "g205.t1"; chr2L_1235068-1247145 database CDS 5001 5903 . + 0 transcript_id "g205.t1.1"; gene_id "g205.t1"; chr2L_1235068-1247145 database CDS 5984 7078 . + 0 transcript_id "g205.t1.1"; gene_id "g205.t1"; chr2L_1235068-1247145 database stop_codon 7076 7078 . + 0 transcript_id "g205.t1.1"; gene_id "g205.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 28 on both strands # start gene g43 chr2L_1235068-1247145 AUGUSTUS gene 5001 7078 0.99 + . g43 chr2L_1235068-1247145 AUGUSTUS transcript 5001 7078 0.99 + . g43.t1 chr2L_1235068-1247145 AUGUSTUS start_codon 5001 5003 . + 0 transcript_id "g43.t1"; gene_id "g43"; chr2L_1235068-1247145 AUGUSTUS intron 5904 5983 1 + . transcript_id "g43.t1"; gene_id "g43"; chr2L_1235068-1247145 AUGUSTUS CDS 5001 5903 1 + 0 transcript_id "g43.t1"; gene_id "g43"; chr2L_1235068-1247145 AUGUSTUS CDS 5984 7078 0.99 + 0 transcript_id "g43.t1"; gene_id "g43"; chr2L_1235068-1247145 AUGUSTUS stop_codon 7076 7078 . + 0 transcript_id "g43.t1"; gene_id "g43"; # protein sequence = [MQSQLKRNTLLLLLLSVVILASCKSGGDAHVRVKRIVGGKQSKAPPVDDPVIFARLFDRDARVEGFRNPSTGIYSFLG # MHYAEPPVGPLRYSRPVYKRLAGDFNATKHGPPCIQPHPQFPQRIIGDEDCLLLNVYTPQMPDETTGLPVFVWIHPGGYRYGSAAQYDATPMAQRGAI # VVAPQYRLGSLGIMGDGTKQFDGNLAMFDLAAALRWVTDYISYFGGNPKQVQAIGHGSGAASAMYLSMSPTSRSAGDVHGVVAMSGTALSQYAMDKEP # VQSVQEVAKINGCPTGNELEIVNCLRSKSAEDIIKNDDKVQTERLAGRALVKGLTGNVGFQPHIESEDDGRALPSLIVGEPEQQLKSSNFSGIPLLTG # VTKHETANSVTVETIEKVFGSAEQFLGSLSDSLNKLTSFLKIDKLTGQIAKPELPGLTSVLTPTLQDVWKVPQALNVDQVLSKVVESTTDVLFNLPAV # LTTQVWSRLAPAFMYSFEYNGTKSKGINFLKGLPIVSETAHDKPETVGHGDEIGYMFDANDIFGNPMEETRLTSAEDLKVRNNLIDLLVKFANKDKEE # GGKSSIFQSVTGKATPFIKIDTKLQTSNDFRFCELSVLGASLSPLSSTSCAGLGNLLGQLGSLGGGLGGTLGGVGSTLGLGGNGGGGKRGGLGLGIL] # end gene g43 ### # # ----- sequence number 29 (length = 11511, name = chr2L_1355147-1366657) ----- # # annotation: # Sequence chr2L_1355147-1366657 length=11511 chr2L_1355147-1366657 database stop_codon 5001 5003 . - 0 transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database intron 5228 5345 . - . transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database intron 5445 5510 . - . transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database intron 5591 5649 . - . transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database intron 5781 6311 . - . transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database intron 6433 6494 . - . transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database CDS 5001 5227 . - 2 transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database CDS 5346 5444 . - 2 transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database CDS 5511 5590 . - 1 transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database CDS 5650 5780 . - 0 transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database CDS 6312 6432 . - 1 transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database CDS 6495 6511 . - 0 transcript_id "g218.t1.1"; gene_id "g218.t1"; chr2L_1355147-1366657 database start_codon 6509 6511 . - 0 transcript_id "g218.t1.1"; gene_id "g218.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 29 on both strands # start gene g44 chr2L_1355147-1366657 AUGUSTUS gene 1 4484 0.46 - . g44 chr2L_1355147-1366657 AUGUSTUS transcript 1 4484 0.46 - . g44.t1 chr2L_1355147-1366657 AUGUSTUS intron 484 4025 0.59 - . transcript_id "g44.t1"; gene_id "g44"; chr2L_1355147-1366657 AUGUSTUS intron 4125 4185 0.68 - . transcript_id "g44.t1"; gene_id "g44"; chr2L_1355147-1366657 AUGUSTUS intron 4272 4320 0.95 - . transcript_id "g44.t1"; gene_id "g44"; chr2L_1355147-1366657 AUGUSTUS CDS 1 483 1 - 2 transcript_id "g44.t1"; gene_id "g44"; chr2L_1355147-1366657 AUGUSTUS CDS 4026 4124 0.64 - 2 transcript_id "g44.t1"; gene_id "g44"; chr2L_1355147-1366657 AUGUSTUS CDS 4186 4271 0.95 - 1 transcript_id "g44.t1"; gene_id "g44"; chr2L_1355147-1366657 AUGUSTUS CDS 4321 4484 0.74 - 0 transcript_id "g44.t1"; gene_id "g44"; chr2L_1355147-1366657 AUGUSTUS start_codon 4482 4484 . - 0 transcript_id "g44.t1"; gene_id "g44"; # protein sequence = [MTAVGDLDMDRFKGKWYTHSIYPHLSLRVEKCQSTDFIEKEENKFSVVARELNTQTGTVKMRKADILNVEPEFGRYVL # GTTSTAFPEGVLMYVLDTDYVNFAIRFMCFDASKIFSFHSEGIYLKTVQDLLAKYGKTYTKVDQTQHMGMPVGTFSQHIVKDLKLPLSPAEFQKEFEA # AVDKSMGSVALLPGVRDLILHLHEYRIPFCIATSSFRKLFKVKAESFKDIFLAFHHVVCGDDPALGPGRGKPYPDIYLLAASRFNPPADPKKCLIFED # APV] # end gene g44 ### # start gene g45 chr2L_1355147-1366657 AUGUSTUS gene 5001 6511 0.98 - . g45 chr2L_1355147-1366657 AUGUSTUS transcript 5001 6511 0.98 - . g45.t1 chr2L_1355147-1366657 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS intron 5228 5345 1 - . transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS intron 5445 5510 1 - . transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS intron 5591 5649 0.98 - . transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS intron 5781 6311 1 - . transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS intron 6433 6494 1 - . transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS CDS 5001 5227 1 - 2 transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS CDS 5346 5444 1 - 2 transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS CDS 5511 5590 0.98 - 1 transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS CDS 5650 5780 0.98 - 0 transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS CDS 6312 6432 1 - 1 transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS CDS 6495 6511 1 - 0 transcript_id "g45.t1"; gene_id "g45"; chr2L_1355147-1366657 AUGUSTUS start_codon 6509 6511 . - 0 transcript_id "g45.t1"; gene_id "g45"; # protein sequence = [MNHHSSSHLLLLISVVFGAVWVAHAQVPFPGKCPDVKLLDTFDAEAYMGVWYEYAAYPFAFEIGKKCIYANYSLIDNS # TVSVVNAAINRFTGQPSNVTGQAKVLGPGQLAVAFYPTQPLTKANYLVLGTDYESYAVVYSCTSVTPLANFKIVWILTRQREPSAEAVDAARKILEDN # DVSQAFLIDTVQKNCPRLDGNGTGLAGEDGLDVDDFVSTTVPNAIEKA] # end gene g45 ### # # ----- sequence number 30 (length = 5296, name = chr2L_1711034-1716329) ----- # # annotation: # Sequence chr2L_1711034-1716329 length=5296 chr2L_1711034-1716329 database stop_codon 719 721 . - 0 transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database intron 835 894 . - . transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database intron 1055 1111 . - . transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database intron 1510 1563 . - . transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database intron 2076 2133 . - . transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database intron 3085 3139 . - . transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database intron 3441 4105 . - . transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database CDS 719 834 . - 2 transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database CDS 895 1054 . - 0 transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database CDS 1112 1509 . - 2 transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database CDS 1564 2075 . - 1 transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database CDS 2134 3084 . - 1 transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database CDS 3140 3440 . - 2 transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database CDS 4106 4523 . - 0 transcript_id "g250.t1.1"; gene_id "g250.t1"; chr2L_1711034-1716329 database start_codon 4521 4523 . - 0 transcript_id "g250.t1.1"; gene_id "g250.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 30 on both strands # start gene g46 chr2L_1711034-1716329 AUGUSTUS gene 1 252 1 + . g46 chr2L_1711034-1716329 AUGUSTUS transcript 1 252 1 + . g46.t1 chr2L_1711034-1716329 AUGUSTUS CDS 1 252 1 + 0 transcript_id "g46.t1"; gene_id "g46"; chr2L_1711034-1716329 AUGUSTUS stop_codon 250 252 . + 0 transcript_id "g46.t1"; gene_id "g46"; # protein sequence = [STVIESEYKLTTYERNLQLNNVDAPVYPQFLRLAQAALPEGVSLQVQEYTDDCEERRYVPDKELLDLKDELERMGGPT # TTRKK] # end gene g46 ### # start gene g47 chr2L_1711034-1716329 AUGUSTUS gene 719 4523 0.53 - . g47 chr2L_1711034-1716329 AUGUSTUS transcript 719 4523 0.53 - . g47.t1 chr2L_1711034-1716329 AUGUSTUS stop_codon 719 721 . - 0 transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS intron 835 894 1 - . transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS intron 1055 1111 1 - . transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS intron 1510 1563 0.93 - . transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS intron 2076 2133 1 - . transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS intron 3085 3139 1 - . transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS intron 3496 4118 0.58 - . transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS CDS 719 834 1 - 2 transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS CDS 895 1054 1 - 0 transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS CDS 1112 1509 1 - 2 transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS CDS 1564 2075 0.93 - 1 transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS CDS 2134 3084 1 - 1 transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS CDS 3140 3495 0.58 - 0 transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS CDS 4119 4523 0.62 - 0 transcript_id "g47.t1"; gene_id "g47"; chr2L_1711034-1716329 AUGUSTUS start_codon 4521 4523 . - 0 transcript_id "g47.t1"; gene_id "g47"; # protein sequence = [MLLSETHFWTTLREDVVRIKSQDLGAFRYLRQRDKEQEQQDLACLAKRDYTERRNGLAVLKNSGRKSTGRLKDNLKKL # EDLLRQHRIIHSEWQDAAQVLLLFSHGLIAHICVDIYTGDILRMVFEKYLVGKLASELCRLCLFSRRAPASVVSPAFFTRSHIVLAYNTNQLTVVHLQ # RPNARSQGPEKIANMDPRIFHVIIPGATERKLSRHLTVNASFDLFVVWTQSSQNEVYPWRPTIRDQDRANIHVFKIKGLQLESIAYCWSENDPLCVDF # LRSSESQIITLEQKVSRKGDISAEICSYELAAGKMQRTAITSIPMGAQICSFAFSPDQEKLFLGSVDRNICLHDLVQQSTKYANQIEIVPNQCAWHCD # SAMLCVANERSVLQCFDLALATIGHQLVSENVTPSSLLDLSHYFVAQPTLLSVAFSRKPDLSTFKHTYAQTDCLLLLVYEQGPLACMRIFGGTGMRGD # IHNSGLTADVIADKYLRLQQPDRAVNVLAALNWETYGAMCLITLHKIANYVFFGGDQRRPRIELMARALKTFAHTLSEETKDEFSDQVYDLKRRFCFY # LLRKNLFAEAFEIAQDVADYDIFMDLYNLTKCISSLSEFAQVAFSQAAAIIHEEDRANGNLSLTCDLRSESACSLSTCSDMLRGQGAGTAPETGLGAS # QPQSQQVLKNYVPPLPSFKSKVFNAEMIKINIPKPELRPPLPKVSIAPPTSSLASLTLKSNSSLQQAPAKSLHPNGNLWSQDVPDQTVGLPMASSPLP # RLPPSNIPDQSAQLGQFSTMPASPPPTGSYQPKFYQHPLVSGNIPAMLPSLTSEDYQKRLLQKKPTASILSNPANPAPTNGEAPATPAKSQTAEKNKV # KFSDTIQVAVVPEIPRKEKPMPPKRNGYSRPAARHLTNPKKELADSLPLCHPNDEYLKDFNPITTNVTKPPIRRREEEPKSSSKGGNSSSSSSSIKVV # HFGVV] # end gene g47 ### # # ----- sequence number 31 (length = 6517, name = chr2L_1730466-1736982) ----- # # annotation: # Sequence chr2L_1730466-1736982 length=6517 chr2L_1730466-1736982 database stop_codon 938 940 . - 0 transcript_id "g257.t1.1"; gene_id "g257.t1"; chr2L_1730466-1736982 database intron 1352 1414 . - . transcript_id "g257.t1.1"; gene_id "g257.t1"; chr2L_1730466-1736982 database intron 1616 1678 . - . transcript_id "g257.t1.1"; gene_id "g257.t1"; chr2L_1730466-1736982 database CDS 938 1351 . - 0 transcript_id "g257.t1.1"; gene_id "g257.t1"; chr2L_1730466-1736982 database CDS 1415 1615 . - 0 transcript_id "g257.t1.1"; gene_id "g257.t1"; chr2L_1730466-1736982 database CDS 1679 1798 . - 0 transcript_id "g257.t1.1"; gene_id "g257.t1"; chr2L_1730466-1736982 database start_codon 1796 1798 . - 0 transcript_id "g257.t1.1"; gene_id "g257.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 31 on both strands # start gene g48 chr2L_1730466-1736982 AUGUSTUS gene 1 484 1 + . g48 chr2L_1730466-1736982 AUGUSTUS transcript 1 484 1 + . g48.t1 chr2L_1730466-1736982 AUGUSTUS CDS 1 484 1 + 1 transcript_id "g48.t1"; gene_id "g48"; chr2L_1730466-1736982 AUGUSTUS stop_codon 482 484 . + 0 transcript_id "g48.t1"; gene_id "g48"; # protein sequence = [FAVVHLSRLVVRYFVEQNGGRGHIAATSSIAGFSPVPFSPTYCAAKHALNAYLLSLKVEMRKLDVSLFAPGPIATDFL # QEAFTGSQGGKVGLSTANQKRMTAQRCGDLFAVALANKMDLTWCGLFPVNLLAYCARNPTLSKILAQLMTEKTLNKIREGKL] # end gene g48 ### # start gene g49 chr2L_1730466-1736982 AUGUSTUS gene 938 1798 0.76 - . g49 chr2L_1730466-1736982 AUGUSTUS transcript 938 1798 0.76 - . g49.t1 chr2L_1730466-1736982 AUGUSTUS stop_codon 938 940 . - 0 transcript_id "g49.t1"; gene_id "g49"; chr2L_1730466-1736982 AUGUSTUS intron 1352 1414 1 - . transcript_id "g49.t1"; gene_id "g49"; chr2L_1730466-1736982 AUGUSTUS intron 1616 1678 0.92 - . transcript_id "g49.t1"; gene_id "g49"; chr2L_1730466-1736982 AUGUSTUS CDS 938 1351 1 - 0 transcript_id "g49.t1"; gene_id "g49"; chr2L_1730466-1736982 AUGUSTUS CDS 1415 1615 0.93 - 0 transcript_id "g49.t1"; gene_id "g49"; chr2L_1730466-1736982 AUGUSTUS CDS 1679 1798 0.83 - 0 transcript_id "g49.t1"; gene_id "g49"; chr2L_1730466-1736982 AUGUSTUS start_codon 1796 1798 . - 0 transcript_id "g49.t1"; gene_id "g49"; # protein sequence = [MKISRFKKSHKTLVFFASNFDYREPYQVLIDATFCQAALQQKIGIDEQIKKYFQCGVKLLTTQCVILESESLGAPLTG # ATSIVKRFHVHKCGHEGKPVPASECIKSMTKDNRYVVASQDRLLQESLRKIPGRCLLYLHKATPVLEAPSKASKKWVQRRAKNLMLGKQVEKIDYMKE # KQGLKPAETAVKPKKHKGPKNPNPLSCKKSKKDKAKQQLKGVEQTAITKAKRKRVKIPAHVKAALGKD] # end gene g49 ### # # ----- sequence number 32 (length = 1190, name = chr2L_1980930-1982119) ----- # # annotation: # Sequence chr2L_1980930-1982119 length=1190 chr2L_1980930-1982119 database start_codon 318 320 . + 0 transcript_id "g283.t1.1"; gene_id "g283.t1"; chr2L_1980930-1982119 database intron 655 712 . + . transcript_id "g283.t1.1"; gene_id "g283.t1"; chr2L_1980930-1982119 database intron 904 956 . + . transcript_id "g283.t1.1"; gene_id "g283.t1"; chr2L_1980930-1982119 database CDS 318 654 . + 0 transcript_id "g283.t1.1"; gene_id "g283.t1"; chr2L_1980930-1982119 database CDS 713 903 . + 2 transcript_id "g283.t1.1"; gene_id "g283.t1"; chr2L_1980930-1982119 database CDS 957 998 . + 0 transcript_id "g283.t1.1"; gene_id "g283.t1"; chr2L_1980930-1982119 database stop_codon 996 998 . + 0 transcript_id "g283.t1.1"; gene_id "g283.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 32 on both strands # start gene g50 chr2L_1980930-1982119 AUGUSTUS gene 363 998 0.76 + . g50 chr2L_1980930-1982119 AUGUSTUS transcript 363 998 0.76 + . g50.t1 chr2L_1980930-1982119 AUGUSTUS start_codon 363 365 . + 0 transcript_id "g50.t1"; gene_id "g50"; chr2L_1980930-1982119 AUGUSTUS intron 655 712 1 + . transcript_id "g50.t1"; gene_id "g50"; chr2L_1980930-1982119 AUGUSTUS intron 904 956 1 + . transcript_id "g50.t1"; gene_id "g50"; chr2L_1980930-1982119 AUGUSTUS CDS 363 654 0.76 + 0 transcript_id "g50.t1"; gene_id "g50"; chr2L_1980930-1982119 AUGUSTUS CDS 713 903 1 + 2 transcript_id "g50.t1"; gene_id "g50"; chr2L_1980930-1982119 AUGUSTUS CDS 957 998 1 + 0 transcript_id "g50.t1"; gene_id "g50"; chr2L_1980930-1982119 AUGUSTUS stop_codon 996 998 . + 0 transcript_id "g50.t1"; gene_id "g50"; # protein sequence = [MKNKAKMYIAGLAGLGLIVLVSIYKCASGEVRQAESEKCFFCDFAHRRQGPPPILEVETDEYVIFKDKYPAARLHYLA # IPKEHFDSLKALNKSHVGLVRRMEQGMMEFLRSQNVDPKEAIVGFHLPPFISVRHLHLHGIFPPADMSFGNKISFMPSFWFKKSSDAIRELEDREL] # end gene g50 ### # # ----- sequence number 33 (length = 8281, name = chr2L_2157211-2165491) ----- # # annotation: # Sequence chr2L_2157211-2165491 length=8281 chr2L_2157211-2165491 database stop_codon 955 957 . - 0 transcript_id "g306.t1.1"; gene_id "g306.t1"; chr2L_2157211-2165491 database intron 1196 1257 . - . transcript_id "g306.t1.1"; gene_id "g306.t1"; chr2L_2157211-2165491 database intron 2036 2101 . - . transcript_id "g306.t1.1"; gene_id "g306.t1"; chr2L_2157211-2165491 database CDS 955 1195 . - 1 transcript_id "g306.t1.1"; gene_id "g306.t1"; chr2L_2157211-2165491 database CDS 1258 2035 . - 2 transcript_id "g306.t1.1"; gene_id "g306.t1"; chr2L_2157211-2165491 database CDS 2102 3281 . - 0 transcript_id "g306.t1.1"; gene_id "g306.t1"; chr2L_2157211-2165491 database start_codon 3279 3281 . - 0 transcript_id "g306.t1.1"; gene_id "g306.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 33 on both strands # start gene g51 chr2L_2157211-2165491 AUGUSTUS gene 955 3281 0.49 - . g51 chr2L_2157211-2165491 AUGUSTUS transcript 955 3281 0.49 - . g51.t1 chr2L_2157211-2165491 AUGUSTUS stop_codon 955 957 . - 0 transcript_id "g51.t1"; gene_id "g51"; chr2L_2157211-2165491 AUGUSTUS intron 1196 1257 1 - . transcript_id "g51.t1"; gene_id "g51"; chr2L_2157211-2165491 AUGUSTUS intron 2036 2101 1 - . transcript_id "g51.t1"; gene_id "g51"; chr2L_2157211-2165491 AUGUSTUS CDS 955 1195 1 - 1 transcript_id "g51.t1"; gene_id "g51"; chr2L_2157211-2165491 AUGUSTUS CDS 1258 2035 1 - 2 transcript_id "g51.t1"; gene_id "g51"; chr2L_2157211-2165491 AUGUSTUS CDS 2102 3281 0.49 - 0 transcript_id "g51.t1"; gene_id "g51"; chr2L_2157211-2165491 AUGUSTUS start_codon 3279 3281 . - 0 transcript_id "g51.t1"; gene_id "g51"; # protein sequence = [MSKMKMLPVQLSLNSLNPGIWSDVLWRCPPAPSSQLAELKTQLPPSLPSDPRLWSREDVLVFLRFCVREFDLPKLDFD # LFQMNGKALCLLTRADFGHRCPGAGDVLHNVLQMLIIESHMMQWHLPNSPVTPTSRYPLSPHSHPPTPTWPPLNAPPENSPFHSSAHSLAGHHFMAPN # SVTLSPPPSVDSQASSPPQAPYQNGGATGAAPGSAGGSAPAAGGATNTSNPTSSSASSTGSNGSQPNIMPMKGISSASSNHSDSEEEYSETSGGVSKM # PPAPLSYSTASPPGTPILKDIKPNWTQQLTNSFVNSWSQQQQQQQQQQAAAVAAVAAQAQQHQLQQQQQQQQLPQKLTLDNTAGPVVTPAGGSISAPT # TPSYMYKAKREFFPENSEPNTNGRLLWDFLQQLLNDRNQKYSDLIAWKCRDTGVFKIVDPAGLAKLWGIQKNHLSMNYDKMSRALRYYYRVNILRKVQ # GERHCYQFLRNPTELKNIKNISLLRQSTPANGNGGSPSMPQGSSQAPGSPAGQNWNPQQQSQQQQQSPQRPASRNGPMSLPAVAAVAAAAAAAYGPPP # TSPLFMHAINGAFHYLSAAAAGPPPNSPALNTPSAVGGPDKFQFHPLKLENGSGSGSESAGEDLKPTDLSVSSKSTATSNEDCYPLIRNADGLTTIKL # IRYNEHQVAASPAGQSPKHDDQQAGASNASSSPRPMDQASEQAQPVPMESDCNGGESEDSFRHMQQ] # end gene g51 ### # # ----- sequence number 34 (length = 5043, name = chr2L_2216827-2221869) ----- # # annotation: # Sequence chr2L_2216827-2221869 length=5043 chr2L_2216827-2221869 database start_codon 601 603 . + 0 transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database intron 719 771 . + . transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database intron 946 1003 . + . transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database intron 1256 1347 . + . transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database intron 2279 2334 . + . transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database intron 2891 2950 . + . transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database intron 3433 3493 . + . transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database CDS 601 718 . + 0 transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database CDS 772 945 . + 2 transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database CDS 1004 1255 . + 2 transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database CDS 1348 2278 . + 2 transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database CDS 2335 2890 . + 1 transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database CDS 2951 3432 . + 0 transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database CDS 3494 3584 . + 1 transcript_id "g316.t1.1"; gene_id "g316.t1"; chr2L_2216827-2221869 database stop_codon 3582 3584 . + 0 transcript_id "g316.t1.1"; gene_id "g316.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 34 on both strands # start gene g52 chr2L_2216827-2221869 AUGUSTUS gene 1 3436 0.57 + . g52 chr2L_2216827-2221869 AUGUSTUS transcript 1 3436 0.57 + . g52.t1 chr2L_2216827-2221869 AUGUSTUS intron 1 771 1 + . transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS intron 946 1003 1 + . transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS intron 1256 1347 1 + . transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS intron 2279 2334 1 + . transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS intron 2891 2950 1 + . transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS CDS 772 945 1 + 2 transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS CDS 1004 1255 1 + 2 transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS CDS 1348 2278 1 + 2 transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS CDS 2335 2890 1 + 1 transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS CDS 2951 3436 0.57 + 0 transcript_id "g52.t1"; gene_id "g52"; chr2L_2216827-2221869 AUGUSTUS stop_codon 3434 3436 . + 0 transcript_id "g52.t1"; gene_id "g52"; # protein sequence = [RLPYISVNYLANESRYQYARCVAASYHSDQPIIAVGLADGKVGICNFRDTYDSSWEYTPRQQRMCTCLAWNELDANIL # AIGHDRHRNDTCITIWDIERGVPKETANFFGVGESANSICWDRNHRTVIAGMSQKMIKLFDLRQSNATCQSIQTKTVQGLSVSPNGNYLCSYVDSVIT # LWDPRNIKSPLRQIQSSKNHLQIAWCPTRTSLLSSLQRDSSYITLYDIRSVDTDNSGEIYHVKRQISPFPARYQHSGKFSFVNCLSWHSRDFERALLL # ADALNILDFRLPATLHTAHSNRRKLPLLMQRPLYTPASPTSTAATPTQQQPTSSCSTNSGSSLDFSTPGGSPFNVDLLKPELFELDLVDETRQRALED # YGIKPDNKRFGELHLTPYLRNVWSTLNNVYSEDRLTGLKATLGINLGHTSEALMASSRIESQVLQWPEGINNSNKLICYRSEQRDLALQLCGWAFEQE # LDRFIDQLYANKEYSRAAMICVFHLKIFHACNILSSAADNMRDPSMYRITVIALSSFNADRCSSTWRNQRSSANMQIHDPHLRAVFSFLTMEKDNFDA # VLKEEGVSLSDRMAFACKYLSETKLADYVAQQIQAAIDGGDLNGLLLTGESQDGIDILQSYMDTSFDVQTVALVAINYFRQELFEDKRIQYWIASYLD # HLNSWGLWEKRAELDIKIESIRPSSRSSRTVFLSCNFCGKSVSNALLDEPRPRSTTTSTNRLSSCPSCRKPLPRCSLCLMHMGTMVNMSNGETPTTTP # DVPGWQTKPFSKWFSWCQTCRHGGHTEHIMQWFK] # end gene g52 ### # # ----- sequence number 35 (length = 857, name = chr2L_2225520-2226376) ----- # # annotation: # Sequence chr2L_2225520-2226376 length=857 chr2L_2225520-2226376 database stop_codon 279 281 . - 0 transcript_id "g318.t1.1"; gene_id "g318.t1"; chr2L_2225520-2226376 database intron 483 539 . - . transcript_id "g318.t1.1"; gene_id "g318.t1"; chr2L_2225520-2226376 database CDS 279 482 . - 0 transcript_id "g318.t1.1"; gene_id "g318.t1"; chr2L_2225520-2226376 database CDS 540 686 . - 0 transcript_id "g318.t1.1"; gene_id "g318.t1"; chr2L_2225520-2226376 database start_codon 684 686 . - 0 transcript_id "g318.t1.1"; gene_id "g318.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 35 on both strands # start gene g53 chr2L_2225520-2226376 AUGUSTUS gene 279 638 0.57 - . g53 chr2L_2225520-2226376 AUGUSTUS transcript 279 638 0.57 - . g53.t1 chr2L_2225520-2226376 AUGUSTUS stop_codon 279 281 . - 0 transcript_id "g53.t1"; gene_id "g53"; chr2L_2225520-2226376 AUGUSTUS intron 483 539 0.76 - . transcript_id "g53.t1"; gene_id "g53"; chr2L_2225520-2226376 AUGUSTUS CDS 279 482 0.83 - 0 transcript_id "g53.t1"; gene_id "g53"; chr2L_2225520-2226376 AUGUSTUS CDS 540 638 0.57 - 0 transcript_id "g53.t1"; gene_id "g53"; chr2L_2225520-2226376 AUGUSTUS start_codon 636 638 . - 0 transcript_id "g53.t1"; gene_id "g53"; # protein sequence = [MDIIRCVNQPENSKKLSEAKASAGKEMILMMQHVFPLVMQLQLEVIKGHGFPGNREGLVQFSQLIREMERDDMEIVRL # RSQIRAIYLPPIAINTTNDILI] # end gene g53 ### # # ----- sequence number 36 (length = 666, name = chr2L_2226377-2227042) ----- # # annotation: # Sequence chr2L_2226377-2227042 length=666 chr2L_2226377-2227042 database stop_codon 172 174 . - 0 transcript_id "g319.t1.1"; gene_id "g319.t1"; chr2L_2226377-2227042 database CDS 172 639 . - 0 transcript_id "g319.t1.1"; gene_id "g319.t1"; chr2L_2226377-2227042 database start_codon 637 639 . - 0 transcript_id "g319.t1.1"; gene_id "g319.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 36 on both strands # (none) # # ----- sequence number 37 (length = 7430, name = chr2L_2485346-2492775) ----- # # annotation: # Sequence chr2L_2485346-2492775 length=7430 chr2L_2485346-2492775 database stop_codon 5001 5003 . - 0 transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database intron 5334 5387 . - . transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database intron 6098 6167 . - . transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database intron 6857 6913 . - . transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database intron 7074 7147 . - . transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database CDS 5001 5333 . - 0 transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database CDS 5388 6097 . - 2 transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database CDS 6168 6856 . - 1 transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database CDS 6914 7073 . - 2 transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database CDS 7148 7175 . - 0 transcript_id "g364.t1.1"; gene_id "g364.t1"; chr2L_2485346-2492775 database start_codon 7173 7175 . - 0 transcript_id "g364.t1.1"; gene_id "g364.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 37 on both strands # start gene g54 chr2L_2485346-2492775 AUGUSTUS gene 4409 4774 0.99 - . g54 chr2L_2485346-2492775 AUGUSTUS transcript 4409 4774 0.99 - . g54.t1 chr2L_2485346-2492775 AUGUSTUS stop_codon 4409 4411 . - 0 transcript_id "g54.t1"; gene_id "g54"; chr2L_2485346-2492775 AUGUSTUS CDS 4409 4774 0.99 - 0 transcript_id "g54.t1"; gene_id "g54"; chr2L_2485346-2492775 AUGUSTUS start_codon 4772 4774 . - 0 transcript_id "g54.t1"; gene_id "g54"; # protein sequence = [MRSLVYNKPRELVPELLEWELGGGQGYSHSRHPLTPTWQRFDGQLTDNQSTAEAMMAQPSRCPLPSAAVPQLWGDNYA # RHLGTGAEAGRDSTQQLALSLANYEWIEARQVAVDGIASALEH] # end gene g54 ### # start gene g55 chr2L_2485346-2492775 AUGUSTUS gene 5001 7430 0.96 - . g55 chr2L_2485346-2492775 AUGUSTUS transcript 5001 7430 0.96 - . g55.t1 chr2L_2485346-2492775 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g55.t1"; gene_id "g55"; chr2L_2485346-2492775 AUGUSTUS intron 5334 5387 1 - . transcript_id "g55.t1"; gene_id "g55"; chr2L_2485346-2492775 AUGUSTUS intron 6098 6173 1 - . transcript_id "g55.t1"; gene_id "g55"; chr2L_2485346-2492775 AUGUSTUS intron 6857 6913 1 - . transcript_id "g55.t1"; gene_id "g55"; chr2L_2485346-2492775 AUGUSTUS intron 7074 7430 0.96 - . transcript_id "g55.t1"; gene_id "g55"; chr2L_2485346-2492775 AUGUSTUS CDS 5001 5333 1 - 0 transcript_id "g55.t1"; gene_id "g55"; chr2L_2485346-2492775 AUGUSTUS CDS 5388 6097 1 - 2 transcript_id "g55.t1"; gene_id "g55"; chr2L_2485346-2492775 AUGUSTUS CDS 6174 6856 1 - 1 transcript_id "g55.t1"; gene_id "g55"; chr2L_2485346-2492775 AUGUSTUS CDS 6914 7073 1 - 2 transcript_id "g55.t1"; gene_id "g55"; # protein sequence = [AIKQMLNLNSQQPKALAAEPVWKILIYDRVGQDIISPIISIKELRELGVTLHVQLHSDRDSIPDVPAIYFCLPTDENL # DRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANIHRVYDQYVNFISLEDDFFILKHQQSDQLSYYAINRANTRDEEMEALMDSIVDSL # FALFVTLGNVPIIRCPRNSAAEMVARKLEKKLRENLWDARANLFHMDATQAGGGVFSFQRPVLLLLDRNMDLATPLHHTWSYQALVHDVLDLGLNLVY # VEDETARARKKPKACDLDRNDRFWMTHKGSPFPTVAEAIQEELESYRNSEEEIKRLKTSMGIEGESDIAFSLVNDTTARLTNAVNSLPQLMEKKRLID # MHTKIATAILNFIKARRLDSFFEIEEKVMSKQTLDRPLLDLLRDGEFGQAEDKLRLYIIYFICAQQLPESEQERLKEALQAAGCDLTALAYVQRWKGI # MNRSPSISQATQYEGGGTKTVSMFTKLVSQGSSFVMEGVKNLVVKRHNLPVTKITEQVMECRSNAETDDYLYLDPKLLKGGEVLPKNRAPFQDAVVFM # VGGGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLTNARQFLKELSALGGEIQSPTATS] # end gene g55 ### # # ----- sequence number 38 (length = 3936, name = chr2L_2492776-2496711) ----- # # annotation: # Sequence chr2L_2492776-2496711 length=3936 chr2L_2492776-2496711 database start_codon 255 257 . + 0 transcript_id "g365.t1.1"; gene_id "g365.t1"; chr2L_2492776-2496711 database intron 522 2598 . + . transcript_id "g365.t1.1"; gene_id "g365.t1"; chr2L_2492776-2496711 database intron 2713 2794 . + . transcript_id "g365.t1.1"; gene_id "g365.t1"; chr2L_2492776-2496711 database intron 3114 3623 . + . transcript_id "g365.t1.1"; gene_id "g365.t1"; chr2L_2492776-2496711 database CDS 255 521 . + 0 transcript_id "g365.t1.1"; gene_id "g365.t1"; chr2L_2492776-2496711 database CDS 2599 2712 . + 0 transcript_id "g365.t1.1"; gene_id "g365.t1"; chr2L_2492776-2496711 database CDS 2795 3113 . + 0 transcript_id "g365.t1.1"; gene_id "g365.t1"; chr2L_2492776-2496711 database CDS 3624 3922 . + 2 transcript_id "g365.t1.1"; gene_id "g365.t1"; chr2L_2492776-2496711 database stop_codon 3920 3922 . + 0 transcript_id "g365.t1.1"; gene_id "g365.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 38 on both strands # start gene g56 chr2L_2492776-2496711 AUGUSTUS gene 1 3922 0.54 + . g56 chr2L_2492776-2496711 AUGUSTUS transcript 1 3922 0.54 + . g56.t1 chr2L_2492776-2496711 AUGUSTUS intron 1 2598 0.54 + . transcript_id "g56.t1"; gene_id "g56"; chr2L_2492776-2496711 AUGUSTUS intron 2713 2794 1 + . transcript_id "g56.t1"; gene_id "g56"; chr2L_2492776-2496711 AUGUSTUS intron 3114 3623 1 + . transcript_id "g56.t1"; gene_id "g56"; chr2L_2492776-2496711 AUGUSTUS CDS 2599 2712 1 + 0 transcript_id "g56.t1"; gene_id "g56"; chr2L_2492776-2496711 AUGUSTUS CDS 2795 3113 1 + 0 transcript_id "g56.t1"; gene_id "g56"; chr2L_2492776-2496711 AUGUSTUS CDS 3624 3922 1 + 2 transcript_id "g56.t1"; gene_id "g56"; chr2L_2492776-2496711 AUGUSTUS stop_codon 3920 3922 . + 0 transcript_id "g56.t1"; gene_id "g56"; # protein sequence = [GGEVIQESITSNIGEDLITLEFQKTDGTLITQVIDFRNEVQILKALVLGEEERGQSQYQVMCFATKFNKGDFISSAAM # AKLRQKNPHTIRTPEEDKGRETFTMSSWVQLNRSLPITRHLQGLCAEAMDATYVRDVDLKAWAELPGSSISSLEAATEKFPDTLSTRCNEVSSLWAPC # LCNLETCIGWYPCGLKYCKGKGVAGADSSGAQQQAQPTNYRCGIKTCRKCTQFTYYVRQKQQCLWDE] # end gene g56 ### # # ----- sequence number 39 (length = 9749, name = chr2L_2748415-2758163) ----- # # annotation: # Sequence chr2L_2748415-2758163 length=9749 chr2L_2748415-2758163 database start_codon 5001 5003 . + 0 transcript_id "g398.t1.1"; gene_id "g398.t1"; chr2L_2748415-2758163 database intron 5247 7593 . + . transcript_id "g398.t1.1"; gene_id "g398.t1"; chr2L_2748415-2758163 database intron 7757 7830 . + . transcript_id "g398.t1.1"; gene_id "g398.t1"; chr2L_2748415-2758163 database CDS 5001 5246 . + 0 transcript_id "g398.t1.1"; gene_id "g398.t1"; chr2L_2748415-2758163 database CDS 7594 7756 . + 0 transcript_id "g398.t1.1"; gene_id "g398.t1"; chr2L_2748415-2758163 database CDS 7831 7880 . + 2 transcript_id "g398.t1.1"; gene_id "g398.t1"; chr2L_2748415-2758163 database stop_codon 7878 7880 . + 0 transcript_id "g398.t1.1"; gene_id "g398.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 39 on both strands # start gene g57 chr2L_2748415-2758163 AUGUSTUS gene 5001 7880 1 + . g57 chr2L_2748415-2758163 AUGUSTUS transcript 5001 7880 1 + . g57.t1 chr2L_2748415-2758163 AUGUSTUS start_codon 5001 5003 . + 0 transcript_id "g57.t1"; gene_id "g57"; chr2L_2748415-2758163 AUGUSTUS intron 5247 7593 1 + . transcript_id "g57.t1"; gene_id "g57"; chr2L_2748415-2758163 AUGUSTUS intron 7757 7830 1 + . transcript_id "g57.t1"; gene_id "g57"; chr2L_2748415-2758163 AUGUSTUS CDS 5001 5246 1 + 0 transcript_id "g57.t1"; gene_id "g57"; chr2L_2748415-2758163 AUGUSTUS CDS 7594 7756 1 + 0 transcript_id "g57.t1"; gene_id "g57"; chr2L_2748415-2758163 AUGUSTUS CDS 7831 7880 1 + 2 transcript_id "g57.t1"; gene_id "g57"; chr2L_2748415-2758163 AUGUSTUS stop_codon 7878 7880 . + 0 transcript_id "g57.t1"; gene_id "g57"; # protein sequence = [MSAATEQQNNGDVAVEKVAADDVSAVKDDLKAKAAAEDKAAAADAAGDAADNGTSKDGEDAADAAAAAPAKESVKGTK # RPAEAKSAESKKAKKAAAADGDSDEEEALEEIIEGDSEIESDEYDIPYDGEEDDIECDDDDDDNDDGSGSDDQA] # end gene g57 ### # # ----- sequence number 40 (length = 1305, name = chr2L_2765909-2767213) ----- # # annotation: # Sequence chr2L_2765909-2767213 length=1305 chr2L_2765909-2767213 database start_codon 407 409 . + 0 transcript_id "g403.t1.1"; gene_id "g403.t1"; chr2L_2765909-2767213 database intron 800 858 . + . transcript_id "g403.t1.1"; gene_id "g403.t1"; chr2L_2765909-2767213 database CDS 407 799 . + 0 transcript_id "g403.t1.1"; gene_id "g403.t1"; chr2L_2765909-2767213 database CDS 859 1182 . + 0 transcript_id "g403.t1.1"; gene_id "g403.t1"; chr2L_2765909-2767213 database stop_codon 1180 1182 . + 0 transcript_id "g403.t1.1"; gene_id "g403.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 40 on both strands # start gene g58 chr2L_2765909-2767213 AUGUSTUS gene 407 1182 0.99 + . g58 chr2L_2765909-2767213 AUGUSTUS transcript 407 1182 0.99 + . g58.t1 chr2L_2765909-2767213 AUGUSTUS start_codon 407 409 . + 0 transcript_id "g58.t1"; gene_id "g58"; chr2L_2765909-2767213 AUGUSTUS intron 800 858 1 + . transcript_id "g58.t1"; gene_id "g58"; chr2L_2765909-2767213 AUGUSTUS CDS 407 799 1 + 0 transcript_id "g58.t1"; gene_id "g58"; chr2L_2765909-2767213 AUGUSTUS CDS 859 1182 0.99 + 0 transcript_id "g58.t1"; gene_id "g58"; chr2L_2765909-2767213 AUGUSTUS stop_codon 1180 1182 . + 0 transcript_id "g58.t1"; gene_id "g58"; # protein sequence = [MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISSLWYALIPLKEFLAFGVVFSVCFQEAFRY # IIYRILRSTEQGLHAVAEDTRVTDNKHILAYVSGLGFGIISGMFALVNVLADMSGPGTMGLKGGTELFFVTSAAQALSIILLHTFWSVIFFNAFDTNN # YIHIGYVVFSHLFVSLITLLNANELYTTTLLINYLVTILTGVLAFRVAGGTSRSFRKFITCQ] # end gene g58 ### # # ----- sequence number 41 (length = 1738, name = chr2L_2879112-2880849) ----- # # annotation: # Sequence chr2L_2879112-2880849 length=1738 chr2L_2879112-2880849 database start_codon 153 155 . + 0 transcript_id "g436.t1.1"; gene_id "g436.t1"; chr2L_2879112-2880849 database intron 769 932 . + . transcript_id "g436.t1.1"; gene_id "g436.t1"; chr2L_2879112-2880849 database CDS 153 768 . + 0 transcript_id "g436.t1.1"; gene_id "g436.t1"; chr2L_2879112-2880849 database CDS 933 1360 . + 2 transcript_id "g436.t1.1"; gene_id "g436.t1"; chr2L_2879112-2880849 database stop_codon 1358 1360 . + 0 transcript_id "g436.t1.1"; gene_id "g436.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 41 on both strands # start gene g59 chr2L_2879112-2880849 AUGUSTUS gene 153 1360 1 + . g59 chr2L_2879112-2880849 AUGUSTUS transcript 153 1360 1 + . g59.t1 chr2L_2879112-2880849 AUGUSTUS start_codon 153 155 . + 0 transcript_id "g59.t1"; gene_id "g59"; chr2L_2879112-2880849 AUGUSTUS intron 769 932 1 + . transcript_id "g59.t1"; gene_id "g59"; chr2L_2879112-2880849 AUGUSTUS CDS 153 768 1 + 0 transcript_id "g59.t1"; gene_id "g59"; chr2L_2879112-2880849 AUGUSTUS CDS 933 1360 1 + 2 transcript_id "g59.t1"; gene_id "g59"; chr2L_2879112-2880849 AUGUSTUS stop_codon 1358 1360 . + 0 transcript_id "g59.t1"; gene_id "g59"; # protein sequence = [MDFTTFVKPSNGGGDSGGGGDADGGGQKLQFWKHVEYIENHGKQEDDYEYCMTEFLRMSGIYWGTTALDIMGQLERLE # RKSIIEFVKRCQCPNTGGFAPCEGHDPHLLYTLSAIQILCTYDALEEIDREAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTID # VEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRLHWISS # EKLQQFILSCQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLKAINPTLCMPQYIIDRLGIKPQLLPRP] # end gene g59 ### # # ----- sequence number 42 (length = 2897, name = chr2L_2969782-2972678) ----- # # annotation: # Sequence chr2L_2969782-2972678 length=2897 chr2L_2969782-2972678 database stop_codon 211 213 . - 0 transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database intron 871 932 . - . transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database intron 1124 1204 . - . transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database intron 1274 1335 . - . transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database intron 1414 1474 . - . transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database CDS 211 870 . - 0 transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database CDS 933 1123 . - 2 transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database CDS 1205 1273 . - 2 transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database CDS 1336 1413 . - 2 transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database CDS 1475 2516 . - 0 transcript_id "g445.t1.1"; gene_id "g445.t1"; chr2L_2969782-2972678 database start_codon 2514 2516 . - 0 transcript_id "g445.t1.1"; gene_id "g445.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 42 on both strands # start gene g60 chr2L_2969782-2972678 AUGUSTUS gene 211 2516 0.8 - . g60 chr2L_2969782-2972678 AUGUSTUS transcript 211 2516 0.8 - . g60.t1 chr2L_2969782-2972678 AUGUSTUS stop_codon 211 213 . - 0 transcript_id "g60.t1"; gene_id "g60"; chr2L_2969782-2972678 AUGUSTUS intron 871 932 0.98 - . transcript_id "g60.t1"; gene_id "g60"; chr2L_2969782-2972678 AUGUSTUS intron 1274 1335 0.96 - . transcript_id "g60.t1"; gene_id "g60"; chr2L_2969782-2972678 AUGUSTUS intron 1408 1474 0.99 - . transcript_id "g60.t1"; gene_id "g60"; chr2L_2969782-2972678 AUGUSTUS CDS 211 870 0.98 - 0 transcript_id "g60.t1"; gene_id "g60"; chr2L_2969782-2972678 AUGUSTUS CDS 933 1273 0.84 - 2 transcript_id "g60.t1"; gene_id "g60"; chr2L_2969782-2972678 AUGUSTUS CDS 1336 1407 0.96 - 2 transcript_id "g60.t1"; gene_id "g60"; chr2L_2969782-2972678 AUGUSTUS CDS 1475 2516 1 - 0 transcript_id "g60.t1"; gene_id "g60"; chr2L_2969782-2972678 AUGUSTUS start_codon 2514 2516 . - 0 transcript_id "g60.t1"; gene_id "g60"; # protein sequence = [MPRVKAVKKQAEALASEPTDPTPNANGNGVDENADSAAEELKVPAKGKPRARKATKTAVSAENSEEVEPQKAPTAAAR # GKKKQPKDTDENGQMEVVAKPKGRAKKATAEAEPEPKVDLPAGKATKPRAKKEPTPAPDEVTSSPPKGRAKAEKPTNAQAKGRKRKELPAEANGGAEE # AAEPPKQRARKEAVPTLKEQAEPGTISKEKVQKAETAAKRARGTKRLADSEIAAALDEPEVDEVPPKAASKRAKKGKMVEPSPETVGDFQSVQEEVES # PPKTAAAPKKRAKKTTNGETAVELEPKTKAKPTKQRAKKEGKEPAPGKKQKKSADKENGVVEEEAKPSTETKPGRKKAPVKAEDVEDIEEAAEESKPA # RGRKKAAAKAEEPDVDEESGSKSMLAEQSGCGGAAVLKSLQTMLNFCFPATKKAKKAETKTTVTLDKDAFALPADKEFNLKICSWNVAGLRAWLKKDG # LQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHPYWLCMPGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYEKFYLINVYVPNSGRKLVN # LEPRMRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERDKMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGW # RLDYCLVSERFVPKVVEHEIRSQCLGSDHCPITIFFNI] # end gene g60 ### # # ----- sequence number 43 (length = 2213, name = chr2L_2972679-2974891) ----- # # annotation: # Sequence chr2L_2972679-2974891 length=2213 chr2L_2972679-2974891 database start_codon 381 383 . + 0 transcript_id "g446.t1.1"; gene_id "g446.t1"; chr2L_2972679-2974891 database intron 430 487 . + . transcript_id "g446.t1.1"; gene_id "g446.t1"; chr2L_2972679-2974891 database intron 691 750 . + . transcript_id "g446.t1.1"; gene_id "g446.t1"; chr2L_2972679-2974891 database CDS 381 429 . + 0 transcript_id "g446.t1.1"; gene_id "g446.t1"; chr2L_2972679-2974891 database CDS 488 690 . + 2 transcript_id "g446.t1.1"; gene_id "g446.t1"; chr2L_2972679-2974891 database CDS 751 1926 . + 0 transcript_id "g446.t1.1"; gene_id "g446.t1"; chr2L_2972679-2974891 database stop_codon 1924 1926 . + 0 transcript_id "g446.t1.1"; gene_id "g446.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 43 on both strands # start gene g61 chr2L_2972679-2974891 AUGUSTUS gene 1 1926 0.99 + . g61 chr2L_2972679-2974891 AUGUSTUS transcript 1 1926 0.99 + . g61.t1 chr2L_2972679-2974891 AUGUSTUS intron 1 487 0.99 + . transcript_id "g61.t1"; gene_id "g61"; chr2L_2972679-2974891 AUGUSTUS intron 691 750 1 + . transcript_id "g61.t1"; gene_id "g61"; chr2L_2972679-2974891 AUGUSTUS CDS 488 690 0.99 + 2 transcript_id "g61.t1"; gene_id "g61"; chr2L_2972679-2974891 AUGUSTUS CDS 751 1926 1 + 0 transcript_id "g61.t1"; gene_id "g61"; chr2L_2972679-2974891 AUGUSTUS stop_codon 1924 1926 . + 0 transcript_id "g61.t1"; gene_id "g61"; # protein sequence = [GFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAVLLDLEPRVINTIMGSVYSKLYNPENVYLSK # HGGGAGNNWASGYSQGEKLQEEVFDIIDREADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLK # RLTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIPTPQLHFLMTGYTPLTSDSDIHTQQLVNVR # KTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSI # CSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATREDYMQFSVKRGNGPVDSKSEDSRSVTSAGS] # end gene g61 ### # # ----- sequence number 44 (length = 7898, name = chr2L_2983726-2991623) ----- # # annotation: # Sequence chr2L_2983726-2991623 length=7898 chr2L_2983726-2991623 database start_codon 4520 4522 . + 0 transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database intron 4659 4711 . + . transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database intron 4954 5014 . + . transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database intron 5357 5433 . + . transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database intron 5613 5671 . + . transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database CDS 4520 4658 . + 0 transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database CDS 4712 4953 . + 2 transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database CDS 5015 5356 . + 0 transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database CDS 5434 5612 . + 0 transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database CDS 5672 5786 . + 1 transcript_id "g451.t1.1"; gene_id "g451.t1"; chr2L_2983726-2991623 database stop_codon 5784 5786 . + 0 transcript_id "g451.t1.1"; gene_id "g451.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 44 on both strands # start gene g62 chr2L_2983726-2991623 AUGUSTUS gene 1 3795 0.12 - . g62 chr2L_2983726-2991623 AUGUSTUS transcript 1 3795 0.12 - . g62.t1 chr2L_2983726-2991623 AUGUSTUS intron 1453 1514 1 - . transcript_id "g62.t1"; gene_id "g62"; chr2L_2983726-2991623 AUGUSTUS intron 1689 1750 1 - . transcript_id "g62.t1"; gene_id "g62"; chr2L_2983726-2991623 AUGUSTUS intron 1861 1915 1 - . transcript_id "g62.t1"; gene_id "g62"; chr2L_2983726-2991623 AUGUSTUS intron 2426 3786 0.12 - . transcript_id "g62.t1"; gene_id "g62"; chr2L_2983726-2991623 AUGUSTUS CDS 1 1452 1 - 1 transcript_id "g62.t1"; gene_id "g62"; chr2L_2983726-2991623 AUGUSTUS CDS 1515 1688 1 - 1 transcript_id "g62.t1"; gene_id "g62"; chr2L_2983726-2991623 AUGUSTUS CDS 1751 1860 1 - 0 transcript_id "g62.t1"; gene_id "g62"; chr2L_2983726-2991623 AUGUSTUS CDS 1916 2425 0.91 - 0 transcript_id "g62.t1"; gene_id "g62"; chr2L_2983726-2991623 AUGUSTUS CDS 3787 3795 0.12 - 0 transcript_id "g62.t1"; gene_id "g62"; chr2L_2983726-2991623 AUGUSTUS start_codon 3793 3795 . - 0 transcript_id "g62.t1"; gene_id "g62"; # protein sequence = [MSQALNESANSIGSDEQDDTREEANGTDHSGSGSGSGSSGSDSDSDSSSGNSSDGRSSPEPEDKSLSVAGFPPTAAAA # QADSKTNGFTDDQEDSSSDGSSGSDSDSDAEGPSDQRNQSINNANTSSSLPKPEQNEEEDNETEAGQQQPASDASADESSDSSANVSPTSSSSSSEEE # EEDYRPKRTRQARKPPTAAEKSKKAPAPKNKKKTWDSDESDESEDSDDEVSTAQKRKPAATTSRSKLAQQQQRRRVKPFSSEDSDDDDASKRCATRRK # GAAVSYKEASEDEATDSEDLLEFEYDESQAATTAATAEEEEKCETIERILAQRAGKRGCTGNQTTIYAIEENGFDPHAGFDEKQTPDAETEAQFLIKW # KGWSYIHNTWESEATLRDMKAKGMKKLDNFIKKEKEQAYWRRYAGPEDIDYFECQLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAES # TWEDAALVLRKWQRCAEQFNDRESSKCTPSRHCRVIKYRPKFSRIKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLY # SLFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRL # KNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKFDTWENFEVQHGNAEDKGYTRLHQQLEPYILRRVKKDVEK] # end gene g62 ### # start gene g63 chr2L_2983726-2991623 AUGUSTUS gene 4520 5786 1 + . g63 chr2L_2983726-2991623 AUGUSTUS transcript 4520 5786 1 + . g63.t1 chr2L_2983726-2991623 AUGUSTUS start_codon 4520 4522 . + 0 transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS intron 4659 4711 1 + . transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS intron 4954 5014 1 + . transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS intron 5357 5433 1 + . transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS intron 5613 5671 1 + . transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS CDS 4520 4658 1 + 0 transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS CDS 4712 4953 1 + 2 transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS CDS 5015 5356 1 + 0 transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS CDS 5434 5612 1 + 0 transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS CDS 5672 5786 1 + 1 transcript_id "g63.t1"; gene_id "g63"; chr2L_2983726-2991623 AUGUSTUS stop_codon 5784 5786 . + 0 transcript_id "g63.t1"; gene_id "g63"; # protein sequence = [MKEVGIALPKSRGVGVGVLAAFLLCFIFYYFYGGYMTLALFAGIILLIFYYAQDLLLYHPDLPANSRIYIPIPTMHNL # PHITVSIKTPDDVTLHAFWVTQPEERSKSSPTLLYFHGNAGNMGHRMQNVWGIYHHLHCNVLMVEYRGYGLSTGVPTERGLVTDARAAIDYLHTRHDL # DHSQLILFGRSLGGAVVVDVAADTVYGQKLMCAIVENTFSSIPEMAVELVHPAVKYIPNLLFKNKYHSMSKIGKCSVPFLFISGLADNLVPPRMMRAL # YTKCGSEIKRLLEFPGGSHNDTWIVDGYYQAIGGFLAELQQQPLLKAPEKSNVWVELEHKIIDV] # end gene g63 ### # start gene g64 chr2L_2983726-2991623 AUGUSTUS gene 6342 7898 0.75 - . g64 chr2L_2983726-2991623 AUGUSTUS transcript 6342 7898 0.75 - . g64.t1 chr2L_2983726-2991623 AUGUSTUS stop_codon 6342 6344 . - 0 transcript_id "g64.t1"; gene_id "g64"; chr2L_2983726-2991623 AUGUSTUS intron 6655 6710 1 - . transcript_id "g64.t1"; gene_id "g64"; chr2L_2983726-2991623 AUGUSTUS intron 6875 6935 0.99 - . transcript_id "g64.t1"; gene_id "g64"; chr2L_2983726-2991623 AUGUSTUS intron 7342 7399 0.99 - . transcript_id "g64.t1"; gene_id "g64"; chr2L_2983726-2991623 AUGUSTUS intron 7554 7609 0.76 - . transcript_id "g64.t1"; gene_id "g64"; chr2L_2983726-2991623 AUGUSTUS CDS 6342 6654 1 - 1 transcript_id "g64.t1"; gene_id "g64"; chr2L_2983726-2991623 AUGUSTUS CDS 6711 6874 1 - 0 transcript_id "g64.t1"; gene_id "g64"; chr2L_2983726-2991623 AUGUSTUS CDS 6936 7341 0.99 - 1 transcript_id "g64.t1"; gene_id "g64"; chr2L_2983726-2991623 AUGUSTUS CDS 7400 7553 0.77 - 2 transcript_id "g64.t1"; gene_id "g64"; chr2L_2983726-2991623 AUGUSTUS CDS 7610 7898 0.96 - 0 transcript_id "g64.t1"; gene_id "g64"; # protein sequence = [NPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQ # LELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKV # VLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKK # PCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHCSNN # RGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEEKPESRKRSSTPASDDSADEDFRGF] # end gene g64 ### # # ----- sequence number 45 (length = 6383, name = chr2L_3016786-3023168) ----- # # annotation: # Sequence chr2L_3016786-3023168 length=6383 chr2L_3016786-3023168 database stop_codon 5001 5003 . - 0 transcript_id "g457.t1.1"; gene_id "g457.t1"; chr2L_3016786-3023168 database intron 5584 5637 . - . transcript_id "g457.t1.1"; gene_id "g457.t1"; chr2L_3016786-3023168 database CDS 5001 5583 . - 1 transcript_id "g457.t1.1"; gene_id "g457.t1"; chr2L_3016786-3023168 database CDS 5638 6164 . - 0 transcript_id "g457.t1.1"; gene_id "g457.t1"; chr2L_3016786-3023168 database start_codon 6162 6164 . - 0 transcript_id "g457.t1.1"; gene_id "g457.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 45 on both strands # start gene g65 chr2L_3016786-3023168 AUGUSTUS gene 1 1105 0.9 - . g65 chr2L_3016786-3023168 AUGUSTUS transcript 1 1105 0.9 - . g65.t1 chr2L_3016786-3023168 AUGUSTUS intron 81 140 1 - . transcript_id "g65.t1"; gene_id "g65"; chr2L_3016786-3023168 AUGUSTUS intron 329 393 0.9 - . transcript_id "g65.t1"; gene_id "g65"; chr2L_3016786-3023168 AUGUSTUS intron 536 598 1 - . transcript_id "g65.t1"; gene_id "g65"; chr2L_3016786-3023168 AUGUSTUS intron 941 994 1 - . transcript_id "g65.t1"; gene_id "g65"; chr2L_3016786-3023168 AUGUSTUS CDS 1 80 1 - 0 transcript_id "g65.t1"; gene_id "g65"; chr2L_3016786-3023168 AUGUSTUS CDS 141 328 0.9 - 2 transcript_id "g65.t1"; gene_id "g65"; chr2L_3016786-3023168 AUGUSTUS CDS 394 535 1 - 0 transcript_id "g65.t1"; gene_id "g65"; chr2L_3016786-3023168 AUGUSTUS CDS 599 940 1 - 0 transcript_id "g65.t1"; gene_id "g65"; chr2L_3016786-3023168 AUGUSTUS CDS 995 1105 1 - 0 transcript_id "g65.t1"; gene_id "g65"; chr2L_3016786-3023168 AUGUSTUS start_codon 1103 1105 . - 0 transcript_id "g65.t1"; gene_id "g65"; # protein sequence = [MNPHLETARSDYLYHLDINVANTRDTSELQNRFGDVRVICMGGTGSRMRQLALYLRDILVVSESGDPVDLCERGNRYA # MYKVGPVLCVSHGVGSSSFSVVLHELIKLLKYARCQDPVLLRIGTCGGLGVPPGTVVASKNAFNGLLRNEHEIAILGQRVVRPAQFSEDVIRDLLAFG # VDANDGFQTISANTMGTDCFYEGRTDGAICEYSEKDKMEFLQKCHDLGIRNIEMEASMFASVTQKVGVKAGDVCVTLIDRLKGDQITITIDQKHEFEQ # RPFFVVGRYIKRL] # end gene g65 ### # start gene g66 chr2L_3016786-3023168 AUGUSTUS gene 2165 4442 0.92 + . g66 chr2L_3016786-3023168 AUGUSTUS transcript 2165 4442 0.92 + . g66.t1 chr2L_3016786-3023168 AUGUSTUS start_codon 2165 2167 . + 0 transcript_id "g66.t1"; gene_id "g66"; chr2L_3016786-3023168 AUGUSTUS intron 2619 2724 0.97 + . transcript_id "g66.t1"; gene_id "g66"; chr2L_3016786-3023168 AUGUSTUS intron 3145 3201 0.95 + . transcript_id "g66.t1"; gene_id "g66"; chr2L_3016786-3023168 AUGUSTUS CDS 2165 2618 0.96 + 0 transcript_id "g66.t1"; gene_id "g66"; chr2L_3016786-3023168 AUGUSTUS CDS 2725 3144 0.92 + 2 transcript_id "g66.t1"; gene_id "g66"; chr2L_3016786-3023168 AUGUSTUS CDS 3202 4442 1 + 2 transcript_id "g66.t1"; gene_id "g66"; chr2L_3016786-3023168 AUGUSTUS stop_codon 4440 4442 . + 0 transcript_id "g66.t1"; gene_id "g66"; # protein sequence = [MAVDMDMEAIKSLTSSQDVANQYDSNWKPDGTAKVLFSQKCSASEKKVTGAGCGHLLPSLSAAICVLIFQVGLAPAVS # ARSPANETAWPPMRHYDIWDDHLGEPGALEEDSFADEVNFRLQTGTPGELDIEMSLQEISDRNSSQANNRQGKVIHLFPVPVDGYCMSSDNRRIGNCL # NAYECRQKDGQARGECAMGFGVCCVFLASCNTTITNNVTYIVSPEFPSFMPSNFTGCSLRVKMMSDEISQVRIDFHHFTLGQPNRRTGVCEGDIFSIG # GGPGGNFSLCGQNSGQHLYYDVGTRASPRQSTLYGSLRPVDASTGPSNSTPTGDRFIDISLSLSSRLLPLRIWEMSVVQIPFSQRAPAGCLQYHTGTE # GIMQTFNFAENGRHLANQNYRICVRQELDMCSIMYQPCDEQSFRIGGGGRMASRGGGTSEAAATTATSSPAPAQSDAAGATATTLGNAAVTTTAPTSS # TLMQMLANMANSTTTTLMTMMSGNSTLAASSVSSGSTSSSSSSSTAAMSTTTTSTTPTPLRSSTEASTTSAAPASSPASDDVEGSGGEVGDDEDDDGG # FLFFRSRPTTEGPTVSRRPRPSGGFDIMGIIRNAIDLPLKWRRRQARQFFSTCSDRITMPCIIEDFIGTGLGPLPGCEPVHCGAQFCSSGVWPCRIES # TVTPFYIGVHFGNGQGAGKANAEDNVGACLRYSQVQCM] # end gene g66 ### # start gene g67 chr2L_3016786-3023168 AUGUSTUS gene 5001 6164 0.45 - . g67 chr2L_3016786-3023168 AUGUSTUS transcript 5001 6164 0.45 - . g67.t1 chr2L_3016786-3023168 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g67.t1"; gene_id "g67"; chr2L_3016786-3023168 AUGUSTUS intron 5584 5637 1 - . transcript_id "g67.t1"; gene_id "g67"; chr2L_3016786-3023168 AUGUSTUS CDS 5001 5583 1 - 1 transcript_id "g67.t1"; gene_id "g67"; chr2L_3016786-3023168 AUGUSTUS CDS 5638 6164 0.45 - 0 transcript_id "g67.t1"; gene_id "g67"; chr2L_3016786-3023168 AUGUSTUS start_codon 6162 6164 . - 0 transcript_id "g67.t1"; gene_id "g67"; # protein sequence = [MLLWLPIAVARRMFIILVLMVIGGLFYIYTSENKYHSCFMEGQVLATQQALTADGETNLLGDVLQADPKPSPGNSIFF # HETSCRLSENRQLETLKVTARQACAIESAAMHNPNFQVFVLFAGPTYRISNNKSHPQPLLEAILSYSNVHLRRLNLESYASGTPMEEWLKDGRLSRSK # YLFSHISDFLRYLTLYRYGGLYLDMDVVVLRNMEKVPPNYTGAESNTHLAAGVMNLAATGFGHEIAASCLRDFQHNFNGGDWGNNGPGVITRVAQKIC # GTKDIALMREDPKRCMGFKVFGRGAFYAVPWKQWRDFFEPENLEETIARCKDSYVVHVWNKHSSKLPIKIGSKNAYALYAEQNCPRSYKAAGEYF] # end gene g67 ### # # ----- sequence number 46 (length = 6006, name = chr2L_3026361-3032366) ----- # # annotation: # Sequence chr2L_3026361-3032366 length=6006 chr2L_3026361-3032366 database stop_codon 245 247 . - 0 transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database intron 615 677 . - . transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database intron 923 978 . - . transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database intron 1949 2005 . - . transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database intron 2647 2703 . - . transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database CDS 245 614 . - 1 transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database CDS 678 922 . - 0 transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database CDS 979 1948 . - 1 transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database CDS 2006 2646 . - 0 transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database CDS 2704 2727 . - 0 transcript_id "g459.t1.1"; gene_id "g459.t1"; chr2L_3026361-3032366 database start_codon 2725 2727 . - 0 transcript_id "g459.t1.1"; gene_id "g459.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 46 on both strands # start gene g68 chr2L_3026361-3032366 AUGUSTUS gene 245 2727 0.85 - . g68 chr2L_3026361-3032366 AUGUSTUS transcript 245 2727 0.85 - . g68.t1 chr2L_3026361-3032366 AUGUSTUS stop_codon 245 247 . - 0 transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS intron 615 677 1 - . transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS intron 923 978 1 - . transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS intron 1949 2005 1 - . transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS intron 2647 2703 0.85 - . transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS CDS 245 614 1 - 1 transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS CDS 678 922 1 - 0 transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS CDS 979 1948 1 - 1 transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS CDS 2006 2646 0.85 - 0 transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS CDS 2704 2727 0.85 - 0 transcript_id "g68.t1"; gene_id "g68"; chr2L_3026361-3032366 AUGUSTUS start_codon 2725 2727 . - 0 transcript_id "g68.t1"; gene_id "g68"; # protein sequence = [MADQLNNEPGQPTPLMSIRFDQQQHESAAANGNENGNGNANGDGDASEDAVDAEKTPGELVLPKALEDVLALKDQRAA # EFTVDADSQGGSGGATQDGDEADVGEDSEEDADNQVNGSASQKTGKQSKAERNKKKKKRKKQNRKIRHQIEFARQQQLAQAEENEPEAKDSETKAHGS # EDEQVAEKEKKDKRKESRSKRRKDRSDEKDTDKKAGEANDENVTIEYVPEKITIADLAPMYRQFYRVFEIFKLENKPKPVEKDKSSHDSESHPRDKKA # TDKQLEDEDDDGDDDEERKEDKEKLSKRKLKKLTRLSVAELKQLVSRPDVVEMHDVTARDPKLLVQLKAYRNTVQVPRHWCFKRKYLQGKRGIEKPPF # DLPAFIKKTGIMEMRESLQEREDAKTLKAKMRERVRPKMGKIDIDYQKLHDAFFKWQTKPRMTIHGDLYYEGKEFETRLKEKKPGDLSEELRIALGMP # VGPNSHKIPPPWLIAQQRYGPPPSYPNLKIPGLNAPIPDGTSFGYHAGGWGKPPVDENGKPLYGDVFGTNILDLDNGVDEADIERNQWGELESESEES # SEEEEEDGEDLGDQQDETGLVTPVEGLVTPSGLTSVPAGMETPENIELRKKKIEAEMEDNETPVLYQVLPEKRTDRIGASMMGSTHVYDVSGSGANKQ # PPVRSTTDREGIVELALDPSELDLDNDAMAQRYEQQMREQQNHLQKEDLSDMLAEHVARQKSKRKRQQTDPAKTTKKYKEFKF] # end gene g68 ### # start gene g69 chr2L_3026361-3032366 AUGUSTUS gene 3060 5774 0.54 + . g69 chr2L_3026361-3032366 AUGUSTUS transcript 3060 5774 0.54 + . g69.t1 chr2L_3026361-3032366 AUGUSTUS start_codon 3060 3062 . + 0 transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS intron 3573 3831 0.54 + . transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS intron 3971 4442 0.73 + . transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS intron 4588 4639 1 + . transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS intron 5534 5593 1 + . transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS CDS 3060 3572 0.76 + 0 transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS CDS 3832 3970 0.54 + 0 transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS CDS 4443 4587 0.99 + 2 transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS CDS 4640 5533 1 + 1 transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS CDS 5594 5774 1 + 1 transcript_id "g69.t1"; gene_id "g69"; chr2L_3026361-3032366 AUGUSTUS stop_codon 5772 5774 . + 0 transcript_id "g69.t1"; gene_id "g69"; # protein sequence = [MFKFNFDVKAESSEDPEAVKNDIFSKQENSEERESGITKDIDWYNSEKVQPLDNLISAMDFYELNAKEMEVGKMTIKH # LVAGFLLEDLKEQSHLVNLDLRKSEENHSDLISGVYEGGAKIWECTEDLLLYLSEKYEDSFWKEKRVLDLGCGCGLLGIYAMKHGARVDFQDYQKLLD # TFAGRLKSDGVILVAAKSHYFGVGGGLEQFSENIRLGNVFQTWRSEAEESKSKENGSLCCCEYVAEDSRERSHILGCCCNCVDFDLVCTRLVTCRAID # RRNIDGMLIAFQDRLRLPWRGGAKRISPAAVAPAFIVPLMLGLATLNSKTAIVLMLTLVGFTIWGMELAKRTATRTNFFLSWLVFSVFYMIIIFEFQV # PLLELAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDELPGIAEASSGEEQAEAQTTLQMESVLSLDDDEVGDMDTAERSGLMHGQPNI # CEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANLTLTSICHPFMVVRPLGYPVLLPDDCSEVFEGFDLGIS # FVVACYALLISSYIAFILARQAYLWWKGSTLHEYKRTSNAAGRNRIWSNWRAILK] # end gene g69 ### # # ----- sequence number 47 (length = 7187, name = chr2L_3326983-3334169) ----- # # annotation: # Sequence chr2L_3326983-3334169 length=7187 chr2L_3326983-3334169 database start_codon 3945 3947 . + 0 transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database intron 4075 4135 . + . transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database intron 4366 4431 . + . transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database intron 4563 4629 . + . transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database intron 4962 5020 . + . transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database intron 5434 5498 . + . transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database CDS 3945 4074 . + 0 transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database CDS 4136 4365 . + 2 transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database CDS 4432 4562 . + 0 transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database CDS 4630 4961 . + 1 transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database CDS 5021 5433 . + 2 transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database CDS 5499 5699 . + 0 transcript_id "g502.t1.1"; gene_id "g502.t1"; chr2L_3326983-3334169 database stop_codon 5697 5699 . + 0 transcript_id "g502.t1.1"; gene_id "g502.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 47 on both strands # start gene g70 chr2L_3326983-3334169 AUGUSTUS gene 954 2643 0.25 + . g70 chr2L_3326983-3334169 AUGUSTUS transcript 954 2643 0.25 + . g70.t1 chr2L_3326983-3334169 AUGUSTUS start_codon 954 956 . + 0 transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS intron 1024 1090 0.72 + . transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS intron 1325 1570 0.3 + . transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS intron 1901 1956 1 + . transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS intron 2370 2442 1 + . transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS CDS 954 1023 0.85 + 0 transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS CDS 1091 1324 0.34 + 2 transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS CDS 1571 1900 0.35 + 2 transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS CDS 1957 2369 1 + 2 transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS CDS 2443 2643 1 + 0 transcript_id "g70.t1"; gene_id "g70"; chr2L_3326983-3334169 AUGUSTUS stop_codon 2641 2643 . + 0 transcript_id "g70.t1"; gene_id "g70"; # protein sequence = [MATFLKNSLLQQKTRYQLLATVIVNIITFGHGVGVGWLSPTLTKIQTADSPLDFEVNLAQISWLGSMLGLDSLCGNLT # IAMLIERAGRKFCLYLMAGPYAVGALTSMVMLSVDLGILAGYILSTYLAYHVVPFLAIILPVAYFIANIMLPETAPYLLKKSQLAAAENSFRYYRNQR # SAICEQTSKVNFEELRTAVLSQQTRNATPLSYKDLTTKPALKGFAASIVLSLGYQFSGVFSFINYMSDIFKASGSVVDVNTATIIIGLVQIVGVYTST # ILVDIVGRRVLMLISTMGVGIGCIAFGCFTYLAKIYDLSDFNWLPLVLMIIICYVANIGLIGIFFLVLVELFPVKIRSLATSLSVIFLSLLVFGTLKL # FPLMLHYWGISFTMWFSAASALLTFFYFWLFLQETKGKSMIED] # end gene g70 ### # start gene g71 chr2L_3326983-3334169 AUGUSTUS gene 3981 7187 0.69 + . g71 chr2L_3326983-3334169 AUGUSTUS transcript 3981 7187 0.69 + . g71.t1 chr2L_3326983-3334169 AUGUSTUS start_codon 3981 3983 . + 0 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS intron 4075 4135 0.94 + . transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS intron 4366 4431 1 + . transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS intron 4563 4629 1 + . transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS intron 4962 5020 0.96 + . transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS intron 5434 5498 0.99 + . transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS intron 5617 6072 0.81 + . transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS intron 6303 6361 0.97 + . transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS intron 6493 6657 1 + . transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS intron 7005 7059 0.97 + . transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 3981 4074 1 + 0 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 4136 4365 0.94 + 2 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 4432 4562 1 + 0 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 4630 4961 0.96 + 1 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 5021 5433 0.96 + 2 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 5499 5616 0.81 + 0 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 6073 6302 0.95 + 2 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 6362 6492 1 + 0 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 6658 7004 1 + 1 transcript_id "g71.t1"; gene_id "g71"; chr2L_3326983-3334169 AUGUSTUS CDS 7060 7187 0.97 + 2 transcript_id "g71.t1"; gene_id "g71"; # protein sequence = [MTFKLRLASVFANPNCLLGRRIRHQFLVTLLLNIATFSHGLGVGWMSPVMRDLQTDESPLDFPVLVSQVSWIGSLVGI # GSVMGNLIAGLLMDRIGRKMVLFFIAIPYTTFWCLIYFVQSVEFLYIGRLMAGITGGACYVVLPTFISEIADTNVRGRLGSIILLSVNTGVLAGYIVS # TRVDYFTSPPFIIGLPVCYFICNFLIPETPHHLVRKGKFEAAKRSFMFYKNIRKNDIKAEDEFEEMKYLLIKEQTEKAKSFDYRDFITRPAFKAYASA # AVLLISNQFSASFCVTTYLADVFAASHTTLNLGMCTIIIGVLQIVGNYVTTLLCDKYGRRILMLTSTLGASVCLTAFGTFTFFAEAADLSSVDWLPLV # ILSCFVFLCNIGLVGCLFVVLVELFPAKIRSVSVSTFVVILSSTVFLTLKIFPICMAVWGTSVTMWSFNVISISHGIGIGWLSPTLRKLQSDSPAGFE # VKSEFEISWVGSMLGMGSVTGNILIGCLLGRLGSKRCLLLIAIPHSCFWILVYFAQSVEYLYVGRLLAGICGGGMYIVHPILLSEIADANIRGTFSAM # VMLSVNVGILVGYIIGTHLPYYSIPLMVLILPLWYLISVLLFIKESPMHLIRIGKYSAAERSFRYYKNIKDSDNIHDQNRAMEEFEIMKIALTKGDAL # QDAVTFKDFYSRPALKAYGPALVLLIANQFSGLFTMVNYMSDIFANSGSTMD] # end gene g71 ### # # ----- sequence number 48 (length = 5758, name = chr2L_3367779-3373536) ----- # # annotation: # Sequence chr2L_3367779-3373536 length=5758 chr2L_3367779-3373536 database start_codon 5001 5003 . + 0 transcript_id "g507.t1.1"; gene_id "g507.t1"; chr2L_3367779-3373536 database CDS 5001 5513 . + 0 transcript_id "g507.t1.1"; gene_id "g507.t1"; chr2L_3367779-3373536 database stop_codon 5511 5513 . + 0 transcript_id "g507.t1.1"; gene_id "g507.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 48 on both strands # start gene g72 chr2L_3367779-3373536 AUGUSTUS gene 1 5269 0.73 - . g72 chr2L_3367779-3373536 AUGUSTUS transcript 1 5269 0.73 - . g72.t1 chr2L_3367779-3373536 AUGUSTUS intron 1 125 0.91 - . transcript_id "g72.t1"; gene_id "g72"; chr2L_3367779-3373536 AUGUSTUS intron 417 5000 1 - . transcript_id "g72.t1"; gene_id "g72"; chr2L_3367779-3373536 AUGUSTUS CDS 126 416 0.91 - 1 transcript_id "g72.t1"; gene_id "g72"; chr2L_3367779-3373536 AUGUSTUS CDS 5001 5269 0.82 - 0 transcript_id "g72.t1"; gene_id "g72"; chr2L_3367779-3373536 AUGUSTUS start_codon 5267 5269 . - 0 transcript_id "g72.t1"; gene_id "g72"; # protein sequence = [MHFVTQQRAQQQHHKSSASSSSSSLASSSSCSGSGSGLGLGSSSRFAALRKSASQGALPKSLATAHSLFHRPSSTQGK # HKRTASLNATLMIKDSDKINPTTSSVNITVTTAESSSSCKNPANANMIPETTQPDQLQSQTQTQAQLQPQSQSPSQCQQAQENPEHLQQQSQPEEELQ # AEAPGSNAGD] # end gene g72 ### # # ----- sequence number 49 (length = 6632, name = chr2L_3376860-3383491) ----- # # annotation: # Sequence chr2L_3376860-3383491 length=6632 chr2L_3376860-3383491 database start_codon 240 242 . + 0 transcript_id "g510.t1.1"; gene_id "g510.t1"; chr2L_3376860-3383491 database intron 268 322 . + . transcript_id "g510.t1.1"; gene_id "g510.t1"; chr2L_3376860-3383491 database intron 947 1002 . + . transcript_id "g510.t1.1"; gene_id "g510.t1"; chr2L_3376860-3383491 database intron 1212 1296 . + . transcript_id "g510.t1.1"; gene_id "g510.t1"; chr2L_3376860-3383491 database CDS 240 267 . + 0 transcript_id "g510.t1.1"; gene_id "g510.t1"; chr2L_3376860-3383491 database CDS 323 946 . + 2 transcript_id "g510.t1.1"; gene_id "g510.t1"; chr2L_3376860-3383491 database CDS 1003 1211 . + 2 transcript_id "g510.t1.1"; gene_id "g510.t1"; chr2L_3376860-3383491 database CDS 1297 1632 . + 0 transcript_id "g510.t1.1"; gene_id "g510.t1"; chr2L_3376860-3383491 database stop_codon 1630 1632 . + 0 transcript_id "g510.t1.1"; gene_id "g510.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 49 on both strands # start gene g73 chr2L_3376860-3383491 AUGUSTUS gene 1 1632 0.96 + . g73 chr2L_3376860-3383491 AUGUSTUS transcript 1 1632 0.96 + . g73.t1 chr2L_3376860-3383491 AUGUSTUS intron 1 322 0.97 + . transcript_id "g73.t1"; gene_id "g73"; chr2L_3376860-3383491 AUGUSTUS intron 947 1002 0.99 + . transcript_id "g73.t1"; gene_id "g73"; chr2L_3376860-3383491 AUGUSTUS intron 1212 1296 1 + . transcript_id "g73.t1"; gene_id "g73"; chr2L_3376860-3383491 AUGUSTUS CDS 323 946 0.96 + 2 transcript_id "g73.t1"; gene_id "g73"; chr2L_3376860-3383491 AUGUSTUS CDS 1003 1211 1 + 2 transcript_id "g73.t1"; gene_id "g73"; chr2L_3376860-3383491 AUGUSTUS CDS 1297 1632 1 + 0 transcript_id "g73.t1"; gene_id "g73"; chr2L_3376860-3383491 AUGUSTUS stop_codon 1630 1632 . + 0 transcript_id "g73.t1"; gene_id "g73"; # protein sequence = [KLPAIAKKVQNLGDMGVWQKSRAFHDLIGYINGTSSAIQGIKTTDEIFESEMLKKLLRLFDALEKLVEQNPPLEQPQR # FGNKAYRDWAQAMRELLPELLEQLLPDDKKRYQVELGQYLTESFGNATRIDYGTGHELSFLFFLCSLFKAEILQERDIVSAALRLFNRYLELARQLQR # TYNMEPAGSQGVWSLDDFQFVPFIWGSAQLAVKSPFDPSKFVDEAIITEYKDHFMFISCIDYICKVKTGHFGEHSNQLWSITDVPTWAKINAGLVKMY # QKEILSKFPVIQHVYFGELMTFEPVSSGTTLSNARLGHVAPPPSKRICIGTPNLVPPVPVATAPPPPAESLSIEQNVGDSSSESSDNSVVLRPSTSSS # SLVAAAEGSGDKPSKE] # end gene g73 ### # # ----- sequence number 50 (length = 6167, name = chr2L_3521210-3527376) ----- # # annotation: # Sequence chr2L_3521210-3527376 length=6167 chr2L_3521210-3527376 database start_codon 4234 4236 . + 0 transcript_id "g536.t1.1"; gene_id "g536.t1"; chr2L_3521210-3527376 database CDS 4234 5991 . + 0 transcript_id "g536.t1.1"; gene_id "g536.t1"; chr2L_3521210-3527376 database stop_codon 5989 5991 . + 0 transcript_id "g536.t1.1"; gene_id "g536.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 50 on both strands # start gene g74 chr2L_3521210-3527376 AUGUSTUS gene 1 1163 1 + . g74 chr2L_3521210-3527376 AUGUSTUS transcript 1 1163 1 + . g74.t1 chr2L_3521210-3527376 AUGUSTUS intron 100 158 1 + . transcript_id "g74.t1"; gene_id "g74"; chr2L_3521210-3527376 AUGUSTUS CDS 1 99 1 + 0 transcript_id "g74.t1"; gene_id "g74"; chr2L_3521210-3527376 AUGUSTUS CDS 159 1163 1 + 0 transcript_id "g74.t1"; gene_id "g74"; chr2L_3521210-3527376 AUGUSTUS stop_codon 1161 1163 . + 0 transcript_id "g74.t1"; gene_id "g74"; # protein sequence = [RRKRSLEQDDREREPASFKDVYNVLKDVINTSQDQKYKHERDRGRDRDRDRDSGDISQLLTTIKGLKSEQVQFRTLIR # QQQERISDYHTRCVKAQDIMSTQKQEIEKLHVNNKQLESSIYHDIDSLRSKIDNKLKSVSHLPKMMRDEHSKYETVMRENCLLADKLHALQQEAMQLK # VKIDELGRRKLVTINRLKAAERDLKIFKNYNSALKTEKRKLTQELSTMKDQLEQLQASSKRQLSRHREQSEKQRRDLQKKIYDLELKLSRSQNSTSSL # IQERDSLIAELQTQLHTLVHNFEVSQKHIRVLRRHIYSMTNQGGTGIVGSGSAGIAHLTSGGSHRPSLIRINQLPQGTSNGRFAAPRTLKATI] # end gene g74 ### # start gene g75 chr2L_3521210-3527376 AUGUSTUS gene 1385 2407 0.9 - . g75 chr2L_3521210-3527376 AUGUSTUS transcript 1385 2407 0.9 - . g75.t1 chr2L_3521210-3527376 AUGUSTUS stop_codon 1385 1387 . - 0 transcript_id "g75.t1"; gene_id "g75"; chr2L_3521210-3527376 AUGUSTUS intron 1869 1934 1 - . transcript_id "g75.t1"; gene_id "g75"; chr2L_3521210-3527376 AUGUSTUS CDS 1385 1868 0.91 - 1 transcript_id "g75.t1"; gene_id "g75"; chr2L_3521210-3527376 AUGUSTUS CDS 1935 2407 0.99 - 0 transcript_id "g75.t1"; gene_id "g75"; chr2L_3521210-3527376 AUGUSTUS start_codon 2405 2407 . - 0 transcript_id "g75.t1"; gene_id "g75"; # protein sequence = [MKAKIICSDGHGLVGNRIAYCDGEKWSTQLGSCALRRQTIDVSCDFESEDMCGWTAELSFLGTWKRVSTVADFHSEKT # GPQKDHTFQNQSIGHYVRMETESDAFGTYHFLSPLYPKELSLSGACFQFHYFMFGSGVGSLLVSIKPVSVTIGDIFKTNHPYKFDQFVMTGSQGARWL # EHTIDINKMDEDFQVIFTATDARSQYGDIAIDDVKLMAAKECARRSTFIEEPKKPIEESDITDSLGYQMTDCSGRCGQDFVRGRYINEGCRCQESCLV # NGNCCLNYVKECHKDLVIAPYNELKFWRLWNLWSGDSNVTVVPK] # end gene g75 ### # start gene g76 chr2L_3521210-3527376 AUGUSTUS gene 4234 5991 0.86 + . g76 chr2L_3521210-3527376 AUGUSTUS transcript 4234 5991 0.86 + . g76.t1 chr2L_3521210-3527376 AUGUSTUS start_codon 4234 4236 . + 0 transcript_id "g76.t1"; gene_id "g76"; chr2L_3521210-3527376 AUGUSTUS CDS 4234 5991 0.86 + 0 transcript_id "g76.t1"; gene_id "g76"; chr2L_3521210-3527376 AUGUSTUS stop_codon 5989 5991 . + 0 transcript_id "g76.t1"; gene_id "g76"; # protein sequence = [MGMNYFDLGAQRVAGKRHVSLDGFQTPPLGISSYGLEYLDNCVDLESVEIQRFVGDATLKLSCGGALIPNLTAVSFRY # NELGTLSGETIQDLPHLKILHLQQNSLRYLEYFKEHSDLEELLIQDERDLVLRFNEILNQLPELRRLSLRNVEKIEDQFLRILPENLTDLIIENTPIQ # PGVLYLTEGVAKLVNVTITNCQLKGFALQPAHNLDIMYLNLSGNAISSLNISFESGPSTLLTLDLSRNRLEHLNFTWFYRTTSLRSLHLQENHFHSLS # LFQLGFISSASIHHIDLRSNELMSFRDTENADLPSWNPQLRISIDDNPWSCQWMLNFSHMQPQLFRLFQYSKYISHININGLSCTPQEPPSEEPPKVR # RIMHVRINGTDSSIPVPHPHGNVSSFTVLYGNPVELHRSQRSLALIIVFMLPLGIAFLFLLLYLYLHCERLFHLSYYASGLPCFGGEKSSSGPRFVDH # VDIVRYPIANGGSSCPVDVETELPDGYETPVSGGTSICNCTGHRESTCSRTHHVTYESLPAELPYQLYAEIKEQADENGDADEVLAVTTGPTAPIYDH # LSFVEEMPKLDELRDIS] # end gene g76 ### # # ----- sequence number 51 (length = 5874, name = chr2L_3616149-3622022) ----- # # annotation: # Sequence chr2L_3616149-3622022 length=5874 chr2L_3616149-3622022 database stop_codon 5001 5003 . - 0 transcript_id "g546.t1.1"; gene_id "g546.t1"; chr2L_3616149-3622022 database intron 5177 5240 . - . transcript_id "g546.t1.1"; gene_id "g546.t1"; chr2L_3616149-3622022 database CDS 5001 5176 . - 2 transcript_id "g546.t1.1"; gene_id "g546.t1"; chr2L_3616149-3622022 database CDS 5241 5358 . - 0 transcript_id "g546.t1.1"; gene_id "g546.t1"; chr2L_3616149-3622022 database start_codon 5356 5358 . - 0 transcript_id "g546.t1.1"; gene_id "g546.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 51 on both strands # start gene g77 chr2L_3616149-3622022 AUGUSTUS gene 3138 4925 0.77 + . g77 chr2L_3616149-3622022 AUGUSTUS transcript 3138 4925 0.77 + . g77.t1 chr2L_3616149-3622022 AUGUSTUS start_codon 3138 3140 . + 0 transcript_id "g77.t1"; gene_id "g77"; chr2L_3616149-3622022 AUGUSTUS intron 4243 4444 0.77 + . transcript_id "g77.t1"; gene_id "g77"; chr2L_3616149-3622022 AUGUSTUS intron 4578 4633 1 + . transcript_id "g77.t1"; gene_id "g77"; chr2L_3616149-3622022 AUGUSTUS CDS 3138 4242 1 + 0 transcript_id "g77.t1"; gene_id "g77"; chr2L_3616149-3622022 AUGUSTUS CDS 4445 4577 0.77 + 2 transcript_id "g77.t1"; gene_id "g77"; chr2L_3616149-3622022 AUGUSTUS CDS 4634 4925 1 + 1 transcript_id "g77.t1"; gene_id "g77"; chr2L_3616149-3622022 AUGUSTUS stop_codon 4923 4925 . + 0 transcript_id "g77.t1"; gene_id "g77"; # protein sequence = [MTTCLRSGVLIIVLLGILGIPEPISAGNILAVYPHFGFSHFKVVMPILNELAHRGHDITVISYVKNPQAGAYPNYEEL # LISAPGEDQSSTTINLVPLTEHTPTRSLGVLIREYVDLHEEGQKTCEHLFASGHIERAIERHRNKPYDLLLTEYFNSDCQLALAKLLNLPIIGLSTCA # LMPYYYDRIDLPDTPAFIQSEFVGFAGQLNWHERLLNFVQAKLLKFLYKYHSNRADNELVRKYLGVEVDVEEVARTQTAFIFGNQHYSLMGSRPQSLQ # FVEIGGVHITKKAEQELPQNIANFLNQSAEGVIFISWGSMVRASSIDEDKLSAILEVLKSQPLKIIWKWEADETPDTDASKFLFVKWAPQLALLFTPI # YGDQFLNAFSVQNRGMGLKLDYQDITVPNLKKALAELSKNSYAQRSLEVSKVFNERQQTPLESAIWSVEHVISNGLIAARLLQSPGIELNGFVYHSLD # SVALILLPLILLILVLCYLCKRNPSKLAHKKVGKKPKRS] # end gene g77 ### # start gene g78 chr2L_3616149-3622022 AUGUSTUS gene 5001 5874 0.77 - . g78 chr2L_3616149-3622022 AUGUSTUS transcript 5001 5874 0.77 - . g78.t1 chr2L_3616149-3622022 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g78.t1"; gene_id "g78"; chr2L_3616149-3622022 AUGUSTUS intron 5177 5874 0.77 - . transcript_id "g78.t1"; gene_id "g78"; chr2L_3616149-3622022 AUGUSTUS CDS 5001 5176 0.86 - 2 transcript_id "g78.t1"; gene_id "g78"; # protein sequence = [CRQPKAPGLCRGHQLRYAYNKKTGNCESFIYTGCASTENNFLTFEECRRDCMQRLRY] # end gene g78 ### # # ----- sequence number 52 (length = 5648, name = chr2L_3686185-3691832) ----- # # annotation: # Sequence chr2L_3686185-3691832 length=5648 chr2L_3686185-3691832 database start_codon 5001 5003 . + 0 transcript_id "g553.t1.1"; gene_id "g553.t1"; chr2L_3686185-3691832 database CDS 5001 5294 . + 0 transcript_id "g553.t1.1"; gene_id "g553.t1"; chr2L_3686185-3691832 database stop_codon 5292 5294 . + 0 transcript_id "g553.t1.1"; gene_id "g553.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 52 on both strands # start gene g79 chr2L_3686185-3691832 AUGUSTUS gene 1 5294 1 + . g79 chr2L_3686185-3691832 AUGUSTUS transcript 1 5294 1 + . g79.t1 chr2L_3686185-3691832 AUGUSTUS intron 1 4137 1 + . transcript_id "g79.t1"; gene_id "g79"; chr2L_3686185-3691832 AUGUSTUS intron 4296 4653 1 + . transcript_id "g79.t1"; gene_id "g79"; chr2L_3686185-3691832 AUGUSTUS CDS 4138 4295 1 + 1 transcript_id "g79.t1"; gene_id "g79"; chr2L_3686185-3691832 AUGUSTUS CDS 4654 5294 1 + 2 transcript_id "g79.t1"; gene_id "g79"; chr2L_3686185-3691832 AUGUSTUS stop_codon 5292 5294 . + 0 transcript_id "g79.t1"; gene_id "g79"; # protein sequence = [NCGFRPVLSEQSAVAAAAAAAAAQRSANHPPLFLPPHLAAQFTHQPLFPGLKGVSPFQSLCSCCSLKPPPPPGSSVVA # PLSIPVSSSSAASSPESPKSSGQGSVHDPRSNSVAELRRKAQEHSAALLQSLHAAAAAGLAFPGLHLPPLSFAHHPALGQHVVNHNNNNTMRMKHEAQ # DMTMNGLGPGSGSGSGSGSAGGGTSSAALLDLAESAVAYQQQQHATLSPPTTPTQQSSGGVAATEGSPGSGAIAGSGSLNGNVVLTKME] # end gene g79 ### # # ----- sequence number 53 (length = 2861, name = chr2L_3694111-3696971) ----- # # annotation: # Sequence chr2L_3694111-3696971 length=2861 chr2L_3694111-3696971 database stop_codon 943 945 . - 0 transcript_id "g557.t1.1"; gene_id "g557.t1"; chr2L_3694111-3696971 database intron 1125 1179 . - . transcript_id "g557.t1.1"; gene_id "g557.t1"; chr2L_3694111-3696971 database CDS 943 1124 . - 2 transcript_id "g557.t1.1"; gene_id "g557.t1"; chr2L_3694111-3696971 database CDS 1180 1246 . - 0 transcript_id "g557.t1.1"; gene_id "g557.t1"; chr2L_3694111-3696971 database start_codon 1244 1246 . - 0 transcript_id "g557.t1.1"; gene_id "g557.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 53 on both strands # start gene g80 chr2L_3694111-3696971 AUGUSTUS gene 2180 2488 0.59 - . g80 chr2L_3694111-3696971 AUGUSTUS transcript 2180 2488 0.59 - . g80.t1 chr2L_3694111-3696971 AUGUSTUS stop_codon 2180 2182 . - 0 transcript_id "g80.t1"; gene_id "g80"; chr2L_3694111-3696971 AUGUSTUS intron 2362 2421 0.93 - . transcript_id "g80.t1"; gene_id "g80"; chr2L_3694111-3696971 AUGUSTUS CDS 2180 2361 0.93 - 2 transcript_id "g80.t1"; gene_id "g80"; chr2L_3694111-3696971 AUGUSTUS CDS 2422 2488 0.59 - 0 transcript_id "g80.t1"; gene_id "g80"; chr2L_3694111-3696971 AUGUSTUS start_codon 2486 2488 . - 0 transcript_id "g80.t1"; gene_id "g80"; # protein sequence = [MKFIAAVCLMFALVAVALGLKDPICGLPAGIDGNGLIKCAAFIPSFSYHPETNSCEKFIYGGCGGNENRFGTQELCEQ # KCKE] # end gene g80 ### # # ----- sequence number 54 (length = 2843, name = chr2L_3701386-3704228) ----- # # annotation: # Sequence chr2L_3701386-3704228 length=2843 chr2L_3701386-3704228 database start_codon 2346 2348 . + 0 transcript_id "g560.t1.1"; gene_id "g560.t1"; chr2L_3701386-3704228 database intron 2428 2480 . + . transcript_id "g560.t1.1"; gene_id "g560.t1"; chr2L_3701386-3704228 database CDS 2346 2427 . + 0 transcript_id "g560.t1.1"; gene_id "g560.t1"; chr2L_3701386-3704228 database CDS 2481 2653 . + 2 transcript_id "g560.t1.1"; gene_id "g560.t1"; chr2L_3701386-3704228 database stop_codon 2651 2653 . + 0 transcript_id "g560.t1.1"; gene_id "g560.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 54 on both strands # (none) # # ----- sequence number 55 (length = 953, name = chr2L_3705078-3706030) ----- # # annotation: # Sequence chr2L_3705078-3706030 length=953 chr2L_3705078-3706030 database start_codon 104 106 . + 0 transcript_id "g562.t1.1"; gene_id "g562.t1"; chr2L_3705078-3706030 database CDS 104 403 . + 0 transcript_id "g562.t1.1"; gene_id "g562.t1"; chr2L_3705078-3706030 database stop_codon 401 403 . + 0 transcript_id "g562.t1.1"; gene_id "g562.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 55 on both strands # (none) # # ----- sequence number 56 (length = 5177, name = chr2L_3709655-3714831) ----- # # annotation: # Sequence chr2L_3709655-3714831 length=5177 chr2L_3709655-3714831 database stop_codon 2615 2617 . - 0 transcript_id "g565.t1.1"; gene_id "g565.t1"; chr2L_3709655-3714831 database intron 2792 2843 . - . transcript_id "g565.t1.1"; gene_id "g565.t1"; chr2L_3709655-3714831 database CDS 2615 2791 . - 0 transcript_id "g565.t1.1"; gene_id "g565.t1"; chr2L_3709655-3714831 database CDS 2844 3128 . - 0 transcript_id "g565.t1.1"; gene_id "g565.t1"; chr2L_3709655-3714831 database start_codon 3126 3128 . - 0 transcript_id "g565.t1.1"; gene_id "g565.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 56 on both strands # start gene g81 chr2L_3709655-3714831 AUGUSTUS gene 1 1964 0.55 - . g81 chr2L_3709655-3714831 AUGUSTUS transcript 1 1964 0.55 - . g81.t1 chr2L_3709655-3714831 AUGUSTUS intron 1 175 0.55 - . transcript_id "g81.t1"; gene_id "g81"; chr2L_3709655-3714831 AUGUSTUS intron 392 447 1 - . transcript_id "g81.t1"; gene_id "g81"; chr2L_3709655-3714831 AUGUSTUS intron 1028 1082 1 - . transcript_id "g81.t1"; gene_id "g81"; chr2L_3709655-3714831 AUGUSTUS CDS 176 391 0.56 - 2 transcript_id "g81.t1"; gene_id "g81"; chr2L_3709655-3714831 AUGUSTUS CDS 448 1027 1 - 0 transcript_id "g81.t1"; gene_id "g81"; chr2L_3709655-3714831 AUGUSTUS CDS 1083 1964 1 - 0 transcript_id "g81.t1"; gene_id "g81"; chr2L_3709655-3714831 AUGUSTUS start_codon 1962 1964 . - 0 transcript_id "g81.t1"; gene_id "g81"; # protein sequence = [MDQYPDENEEFELQYQDELELLEDLPDEFNAYDGPSTSKQAAEKQKENRAPVAALRDSTRLGNSTLGSPQLSQITFGA # SQLGGEEEAEGTSSGGQVNRRLFGTPKGPPVGRGCSTPFQRMPAIQELENTQLTSRSYGLEKENAAANQLQEVGLKNVNKRRLERDLFGDIDDLFHES # YEDPMVKKARTEEQRDHEAIERILELRRKMRESSKTLRKDDVSRLKALHDFKMRNLSYEIPNWPFLAIQRSDLERIYVRFHSEDYEQRQLDLISARGE # VVGSLLGEAKDKIWQEAGEIVLSRATAAEDADVTLVNSNANSEPGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKREQEAVTGE # GGTAGGAANQLNSFNKRTGKFESNGGWRQRKSRQALNTNVDALGRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGT # QMSSVLNEDKRPNCIVLDEIDGAPRQSIDYLVKFISDAVYTKVKAKGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVTFPPIDAA] # end gene g81 ### # start gene g82 chr2L_3709655-3714831 AUGUSTUS gene 4439 5177 0.51 + . g82 chr2L_3709655-3714831 AUGUSTUS transcript 4439 5177 0.51 + . g82.t1 chr2L_3709655-3714831 AUGUSTUS start_codon 4439 4441 . + 0 transcript_id "g82.t1"; gene_id "g82"; chr2L_3709655-3714831 AUGUSTUS intron 4838 4992 0.92 + . transcript_id "g82.t1"; gene_id "g82"; chr2L_3709655-3714831 AUGUSTUS CDS 4439 4837 0.55 + 0 transcript_id "g82.t1"; gene_id "g82"; chr2L_3709655-3714831 AUGUSTUS CDS 4993 5177 0.9 + 0 transcript_id "g82.t1"; gene_id "g82"; # protein sequence = [MHNWLASHNGDEDAMAAPSSCPASSENGSRLESRRIFGDITTNRLWTFRVLMNQDLAPNEQLAIVGNCEALGNWQHSG # AAILSKNEEDNEYSNLWTGEIYIPRHCDTEYRYMVCAVDPGTEQLIVRRWETQLQPRIVKELDEQPAKNQSDIFGSFNGQEKVDRGWLTKETLVQLKF # FYAPFTFKQRMKRRHIQV] # end gene g82 ### # # ----- sequence number 57 (length = 6119, name = chr2L_3804074-3810192) ----- # # annotation: # Sequence chr2L_3804074-3810192 length=6119 chr2L_3804074-3810192 database stop_codon 5001 5003 . - 0 transcript_id "g578.t1.1"; gene_id "g578.t1"; chr2L_3804074-3810192 database CDS 5001 5318 . - 0 transcript_id "g578.t1.1"; gene_id "g578.t1"; chr2L_3804074-3810192 database start_codon 5316 5318 . - 0 transcript_id "g578.t1.1"; gene_id "g578.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 57 on both strands # start gene g83 chr2L_3804074-3810192 AUGUSTUS gene 3092 4168 0.8 + . g83 chr2L_3804074-3810192 AUGUSTUS transcript 3092 4168 0.8 + . g83.t1 chr2L_3804074-3810192 AUGUSTUS start_codon 3092 3094 . + 0 transcript_id "g83.t1"; gene_id "g83"; chr2L_3804074-3810192 AUGUSTUS CDS 3092 4168 0.8 + 0 transcript_id "g83.t1"; gene_id "g83"; chr2L_3804074-3810192 AUGUSTUS stop_codon 4166 4168 . + 0 transcript_id "g83.t1"; gene_id "g83"; # protein sequence = [MMCHQQTSSSCAHLMYDQHSSEEELEVINGPSSQAGQHPGTAATGSSCASRISNRGCTSSLDTEAPYEERATTSNSKR # SSSTLMVENRKRSLAHSSDDEVGSGQTVSKSFNPIYDCNPKQLRNSLEPILTPVNFRTSPPLEAFKPNRSHMMFRSTTPLILSEARCGIENIKLCDNS # VNEENGDNGGGGGAANSSKCAKIGALAGNASGTVAATGNGNGGNENEPSVIKACSSSLKMSNSSHHIYQPQPKYSFHYNSSRSSPASTTGLDMEVRSV # SPPAKLFHCAISPRRRPSNNASGAAGGATTISPSSASSSSGTTTTHNAANSAGNAANVTAVATQRLQRPHRPCLDFDKMQQVSL] # end gene g83 ### # # ----- sequence number 58 (length = 8138, name = chr2L_3810193-3818330) ----- # # annotation: # Sequence chr2L_3810193-3818330 length=8138 chr2L_3810193-3818330 database stop_codon 802 804 . - 0 transcript_id "g579.t1.1"; gene_id "g579.t1"; chr2L_3810193-3818330 database intron 1314 1378 . - . transcript_id "g579.t1.1"; gene_id "g579.t1"; chr2L_3810193-3818330 database intron 2343 2402 . - . transcript_id "g579.t1.1"; gene_id "g579.t1"; chr2L_3810193-3818330 database intron 3030 3096 . - . transcript_id "g579.t1.1"; gene_id "g579.t1"; chr2L_3810193-3818330 database CDS 802 1313 . - 2 transcript_id "g579.t1.1"; gene_id "g579.t1"; chr2L_3810193-3818330 database CDS 1379 2342 . - 0 transcript_id "g579.t1.1"; gene_id "g579.t1"; chr2L_3810193-3818330 database CDS 2403 3029 . - 0 transcript_id "g579.t1.1"; gene_id "g579.t1"; chr2L_3810193-3818330 database CDS 3097 3138 . - 0 transcript_id "g579.t1.1"; gene_id "g579.t1"; chr2L_3810193-3818330 database start_codon 3136 3138 . - 0 transcript_id "g579.t1.1"; gene_id "g579.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 58 on both strands # start gene g84 chr2L_3810193-3818330 AUGUSTUS gene 802 3138 0.97 - . g84 chr2L_3810193-3818330 AUGUSTUS transcript 802 3138 0.97 - . g84.t1 chr2L_3810193-3818330 AUGUSTUS stop_codon 802 804 . - 0 transcript_id "g84.t1"; gene_id "g84"; chr2L_3810193-3818330 AUGUSTUS intron 1314 1378 1 - . transcript_id "g84.t1"; gene_id "g84"; chr2L_3810193-3818330 AUGUSTUS intron 2343 2402 0.98 - . transcript_id "g84.t1"; gene_id "g84"; chr2L_3810193-3818330 AUGUSTUS intron 3030 3096 1 - . transcript_id "g84.t1"; gene_id "g84"; chr2L_3810193-3818330 AUGUSTUS CDS 802 1313 1 - 2 transcript_id "g84.t1"; gene_id "g84"; chr2L_3810193-3818330 AUGUSTUS CDS 1379 2342 0.98 - 0 transcript_id "g84.t1"; gene_id "g84"; chr2L_3810193-3818330 AUGUSTUS CDS 2403 3029 1 - 0 transcript_id "g84.t1"; gene_id "g84"; chr2L_3810193-3818330 AUGUSTUS CDS 3097 3138 0.99 - 0 transcript_id "g84.t1"; gene_id "g84"; chr2L_3810193-3818330 AUGUSTUS start_codon 3136 3138 . - 0 transcript_id "g84.t1"; gene_id "g84"; # protein sequence = [MERKEVDTQQFIDHTLLANHFIMDLIDQTYKSEGPTNLSTNPSSGNSESGVGYVEKESLTPELNFHNTIFQFVNKSSP # ENDVVPHQVDAQPTFPALAIEPTVPIDVSTGLHEDEDLLYAHNNASCTNARKVLPHKKRISRKLKGNIDPELDHQHKHVQDVAPSSLYSCEICGYAVH # TQLDFFAHLKQHYEPTVLEQRLVVQDPQQQHQQKEPLDMCGLSAQDKLQQEQAKLDQVFQDVQLNFENFHNISHHVNDVANVGVNMVLHGQATDKLNA # VVVNTSSTPNSVPVVDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITFPALLLPGEPPPASSEPATPLLKENPHVG # DHMALDFLSPEKADPQEEAKLEKTLSKACEPNEQTLLVAPPACQTPPIPTVPPANSSIEQLRRSPLELSEAFKLEEDDMTDSRPASSFEEGDPDAEEP # NECFQMEVLDTSLTEEAENKTRRKHFCDKCNRDFNSYNALKYHQYTHNQERSHKCDSCERSFYTQSALKAHERTHSGVKPFKCDKCEFQFRQWGDLKY # HIISRHSDVKAHMCEFCGKSFSRRYSLVVHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIHDPSRTSQP # PAEKAKKKRAAASNKQLPIEEDDELATNIQNNKSDAMRDQTGQKILGL] # end gene g84 ### # # ----- sequence number 59 (length = 10783, name = chr2L_3866553-3877335) ----- # # annotation: # Sequence chr2L_3866553-3877335 length=10783 chr2L_3866553-3877335 database stop_codon 5001 5003 . - 0 transcript_id "g585.t1.1"; gene_id "g585.t1"; chr2L_3866553-3877335 database intron 5318 5620 . - . transcript_id "g585.t1.1"; gene_id "g585.t1"; chr2L_3866553-3877335 database CDS 5001 5317 . - 2 transcript_id "g585.t1.1"; gene_id "g585.t1"; chr2L_3866553-3877335 database CDS 5621 5783 . - 0 transcript_id "g585.t1.1"; gene_id "g585.t1"; chr2L_3866553-3877335 database start_codon 5781 5783 . - 0 transcript_id "g585.t1.1"; gene_id "g585.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 59 on both strands # start gene g85 chr2L_3866553-3877335 AUGUSTUS gene 1 672 0.97 + . g85 chr2L_3866553-3877335 AUGUSTUS transcript 1 672 0.97 + . g85.t1 chr2L_3866553-3877335 AUGUSTUS intron 435 516 1 + . transcript_id "g85.t1"; gene_id "g85"; chr2L_3866553-3877335 AUGUSTUS CDS 1 434 1 + 2 transcript_id "g85.t1"; gene_id "g85"; chr2L_3866553-3877335 AUGUSTUS CDS 517 672 0.97 + 0 transcript_id "g85.t1"; gene_id "g85"; chr2L_3866553-3877335 AUGUSTUS stop_codon 670 672 . + 0 transcript_id "g85.t1"; gene_id "g85"; # protein sequence = [LNERQQADILEELNLTGPLCHDKRIFTTCLTAEEVRKHNQYTNRSIEFREEYVDTILDNLLPDDVRCLIVAEDELARC # QPLERIFPTAGTHVYLRYVENARYYNRLLDAWETKYAKNREMGIALLSRYCRDKYHLQVSDAAMEKEPNVALTEIDMLHVRKDEVLDGATTLAILKPV # VQEGCEVAPIPDACIEIKS] # end gene g85 ### # start gene g86 chr2L_3866553-3877335 AUGUSTUS gene 1430 4637 0.69 + . g86 chr2L_3866553-3877335 AUGUSTUS transcript 1430 4637 0.69 + . g86.t1 chr2L_3866553-3877335 AUGUSTUS start_codon 1430 1432 . + 0 transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS intron 1437 1827 0.9 + . transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS intron 1989 2051 0.8 + . transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS intron 2510 2565 1 + . transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS intron 2925 2990 1 + . transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS intron 3252 3320 0.99 + . transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS intron 3498 3572 0.99 + . transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS intron 4003 4069 0.98 + . transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS CDS 1430 1436 0.9 + 0 transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS CDS 1828 1988 0.8 + 2 transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS CDS 2052 2509 1 + 0 transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS CDS 2566 2924 1 + 1 transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS CDS 2991 3251 0.99 + 2 transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS CDS 3321 3497 0.98 + 2 transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS CDS 3573 4002 0.97 + 2 transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS CDS 4070 4637 0.99 + 1 transcript_id "g86.t1"; gene_id "g86"; chr2L_3866553-3877335 AUGUSTUS stop_codon 4635 4637 . + 0 transcript_id "g86.t1"; gene_id "g86"; # protein sequence = [MSGDESGEEKHVLNLSKQKLKKVPKQDDAHSIRQLILDENELQKIDNIDSYLKIETLSLARNQLLRMYGVCRLHCLRE # LNLSFNGILSIEGLKECIHLRVLNLEGNNIKTIEHLNTNVNLECLNLADNSIGSISDMSYLRNLKELYLHGNRLTHLRQCDKCLPTSLETLTLAKNSI # NDLNEICTLSHLSNLLSISIADNPCVTMINSLDGFDYRPFVLNWCMSLKYIDGFVVDPIESLKAEWLYSQGRGRQFRVGEQQGLAKYLSSVCPLVGKA # LENENDRKLRLILSKAQHHQRQLQEEIMDNANSSASTSPSSHRKKPTSRIQSPRFSRLSGRQGSPESMVNSYHGNSSNNSIVSDNGSTNHSLQMSISL # IENIKNDGEGFSLAGSGMSSSVTTKTYNSTESTPRNITPNPYNDQTFISQTPSGGPLAAASKMVPVPETLMSPDVCPAAVAQRVTVTALNPQLHKTKI # NKNKDNKLNLPRVRSPQLKRNQSPTSSPRRMANKCSADNMQAPEKLQQSAVLADSGGFSTDDDGEQINIEKLRAIRKMAAQKQQQMHQEQLKQQVDNN # LNCQDRLIEHVTESSAVTIQKMWRGYHTRKKTNKDIAERLQRRRTQEYIEQLGKDMLLTKAQLENERKIQQLQMQAINALWKKVSTMEVDPKGIPAAA # EQGEDSNGGGSGHLSLDQNSAAVVNDLAKRCTMLTDQVQMLQSSIGTIVNCLTMVCNLPQDAIKKQAEIIDCSSTQTDLIAVHTPQIEDLTNFPFTKT # RPSTLALESKHEAALACPKIDELNDVDLKETQEDSENLDKDP] # end gene g86 ### # start gene g87 chr2L_3866553-3877335 AUGUSTUS gene 5001 5783 0.95 - . g87 chr2L_3866553-3877335 AUGUSTUS transcript 5001 5783 0.95 - . g87.t1 chr2L_3866553-3877335 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g87.t1"; gene_id "g87"; chr2L_3866553-3877335 AUGUSTUS intron 5318 5620 1 - . transcript_id "g87.t1"; gene_id "g87"; chr2L_3866553-3877335 AUGUSTUS CDS 5001 5317 1 - 2 transcript_id "g87.t1"; gene_id "g87"; chr2L_3866553-3877335 AUGUSTUS CDS 5621 5783 0.95 - 0 transcript_id "g87.t1"; gene_id "g87"; chr2L_3866553-3877335 AUGUSTUS start_codon 5781 5783 . - 0 transcript_id "g87.t1"; gene_id "g87"; # protein sequence = [MHRSHPSISRRKHLMKEMMEDDYALPTETQQIARVISSRGNNLHEVETVDETFLVSMPNKFRKSMWVKRGDFLLVEPI # EEGDKVKAEICKILTPEHIKEYTKAAIWPDKFTKKPVQEEATSQNKDDSDFEDDLLPNTNRPVNRDSSDEEEDEETSSEED] # end gene g87 ### # start gene g88 chr2L_3866553-3877335 AUGUSTUS gene 6278 8741 0.97 - . g88 chr2L_3866553-3877335 AUGUSTUS transcript 6278 8741 0.97 - . g88.t1 chr2L_3866553-3877335 AUGUSTUS stop_codon 6278 6280 . - 0 transcript_id "g88.t1"; gene_id "g88"; chr2L_3866553-3877335 AUGUSTUS intron 6396 6466 1 - . transcript_id "g88.t1"; gene_id "g88"; chr2L_3866553-3877335 AUGUSTUS intron 6771 6832 1 - . transcript_id "g88.t1"; gene_id "g88"; chr2L_3866553-3877335 AUGUSTUS intron 7844 7897 1 - . transcript_id "g88.t1"; gene_id "g88"; chr2L_3866553-3877335 AUGUSTUS CDS 6278 6395 1 - 1 transcript_id "g88.t1"; gene_id "g88"; chr2L_3866553-3877335 AUGUSTUS CDS 6467 6770 1 - 2 transcript_id "g88.t1"; gene_id "g88"; chr2L_3866553-3877335 AUGUSTUS CDS 6833 7843 1 - 2 transcript_id "g88.t1"; gene_id "g88"; chr2L_3866553-3877335 AUGUSTUS CDS 7898 8741 0.97 - 0 transcript_id "g88.t1"; gene_id "g88"; chr2L_3866553-3877335 AUGUSTUS start_codon 8739 8741 . - 0 transcript_id "g88.t1"; gene_id "g88"; # protein sequence = [MYQWTHTEQPTTSLPLTPGKLDKVAAWPFSSTPSGIRALESASLASLGAGGVAGSLATIATASTASSDNQKTLQQILK # KRLLNCTTLAEVHAVVNELLSSVDEPPRRPSKRCVNLTELLNASEATVYEYNKTGAEGCVKSFTDAETQTESEDCEGTCKCGQSSTKVSDNESAKEDG # EKPHAVAPPPPPPPPPLHAFVAPPPPPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPSKTTISPAPLPDPAEG # NWFHRTNTMRKSAVNPPKPMRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPDEPPAANGADAPPTAPPATKEIWTEIEETPLDNIDEFTELFSR # QAIAPVSKPKELKVKRAKSIKVLDPERSRNVGIIWRSLHVPSSEIEHAIYHIDTSVVSLEALQHMSNIQATEDELQRIKEAAGGDIPLDHPEQFLLDI # SLISMASERISCIVFQAEFEESVTLLFRKLETVSQLSQQLIESEDLKLVFSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVKSKESHTTLLHFIV # RTYIAQRRKEGVHPLEIRLPIPEPADVERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKVLAASRPEIMEPFKSKMEEFVEGADKSMAKLHQSLDECRD # LFLETMRFYHFSPKACTLTLAQCTPDQFFEYWTNFTNDFKDIWKKEITSLLNELMKKSKQAQIESRRNVSTKVEKSGRISLKERMLMRRSKN] # end gene g88 ### # # ----- sequence number 60 (length = 5589, name = chr2L_3999131-4004719) ----- # # annotation: # Sequence chr2L_3999131-4004719 length=5589 chr2L_3999131-4004719 database start_codon 5001 5003 . + 0 transcript_id "g590.t1.1"; gene_id "g590.t1"; chr2L_3999131-4004719 database CDS 5001 5252 . + 0 transcript_id "g590.t1.1"; gene_id "g590.t1"; chr2L_3999131-4004719 database stop_codon 5250 5252 . + 0 transcript_id "g590.t1.1"; gene_id "g590.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 60 on both strands # start gene g89 chr2L_3999131-4004719 AUGUSTUS gene 5001 5252 1 + . g89 chr2L_3999131-4004719 AUGUSTUS transcript 5001 5252 1 + . g89.t1 chr2L_3999131-4004719 AUGUSTUS start_codon 5001 5003 . + 0 transcript_id "g89.t1"; gene_id "g89"; chr2L_3999131-4004719 AUGUSTUS CDS 5001 5252 1 + 0 transcript_id "g89.t1"; gene_id "g89"; chr2L_3999131-4004719 AUGUSTUS stop_codon 5250 5252 . + 0 transcript_id "g89.t1"; gene_id "g89"; # protein sequence = [MPPPPHDHCGGPPHRRGPVIKVQIAPPWPRRHHRPPPQVVVVQQQAPPPPPVMVVQQAPPPPYYQNPPPPPPPGSSHY # HNPQY] # end gene g89 ### # # ----- sequence number 61 (length = 1328, name = chr2L_4005742-4007069) ----- # # annotation: # Sequence chr2L_4005742-4007069 length=1328 chr2L_4005742-4007069 database start_codon 372 374 . + 0 transcript_id "g592.t1.1"; gene_id "g592.t1"; chr2L_4005742-4007069 database CDS 372 695 . + 0 transcript_id "g592.t1.1"; gene_id "g592.t1"; chr2L_4005742-4007069 database stop_codon 693 695 . + 0 transcript_id "g592.t1.1"; gene_id "g592.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 61 on both strands # start gene g90 chr2L_4005742-4007069 AUGUSTUS gene 372 695 1 + . g90 chr2L_4005742-4007069 AUGUSTUS transcript 372 695 1 + . g90.t1 chr2L_4005742-4007069 AUGUSTUS start_codon 372 374 . + 0 transcript_id "g90.t1"; gene_id "g90"; chr2L_4005742-4007069 AUGUSTUS CDS 372 695 1 + 0 transcript_id "g90.t1"; gene_id "g90"; chr2L_4005742-4007069 AUGUSTUS stop_codon 693 695 . + 0 transcript_id "g90.t1"; gene_id "g90"; # protein sequence = [MPYYEEERRHHHHHHHGGRPIVEVDIVPPRIPRPVIEIGVGGRYPPPPPRVEVITPAAVYQPPPPRPIIEVDVVPPRA # PFIEFNIGGRRPPPREEVIIVQQPPPPRW] # end gene g90 ### # # ----- sequence number 62 (length = 5678, name = chr2L_4008322-4013999) ----- # # annotation: # Sequence chr2L_4008322-4013999 length=5678 chr2L_4008322-4013999 database start_codon 391 393 . + 0 transcript_id "g594.t1.1"; gene_id "g594.t1"; chr2L_4008322-4013999 database CDS 391 678 . + 0 transcript_id "g594.t1.1"; gene_id "g594.t1"; chr2L_4008322-4013999 database stop_codon 676 678 . + 0 transcript_id "g594.t1.1"; gene_id "g594.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 62 on both strands # start gene g91 chr2L_4008322-4013999 AUGUSTUS gene 1 678 0.69 + . g91 chr2L_4008322-4013999 AUGUSTUS transcript 1 678 0.69 + . g91.t1 chr2L_4008322-4013999 AUGUSTUS intron 1 426 0.69 + . transcript_id "g91.t1"; gene_id "g91"; chr2L_4008322-4013999 AUGUSTUS CDS 427 678 0.69 + 0 transcript_id "g91.t1"; gene_id "g91"; chr2L_4008322-4013999 AUGUSTUS stop_codon 676 678 . + 0 transcript_id "g91.t1"; gene_id "g91"; # protein sequence = [CECYHRRGLLYYANPLAWGRPCRKCRRMMSRNNIVVSVPANQMAVPVQTTTTTVMPAQCATHWQEPQTMSALPPKYDQ # AVAAH] # end gene g91 ### # # ----- sequence number 63 (length = 86157, name = chr2L_4027676-4113832) ----- # # annotation: # Sequence chr2L_4027676-4113832 length=86157 chr2L_4027676-4113832 database start_codon 5001 5003 . + 0 transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database intron 5095 46838 . + . transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database intron 47038 51828 . + . transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database intron 52090 52150 . + . transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database intron 52348 70174 . + . transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database intron 72365 72946 . + . transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database intron 73454 79760 . + . transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database intron 80130 85945 . + . transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database CDS 5001 5094 . + 0 transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database CDS 46839 47037 . + 2 transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database CDS 51829 52089 . + 1 transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database CDS 52151 52347 . + 1 transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database CDS 70175 72364 . + 2 transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database CDS 72947 73453 . + 2 transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database CDS 79761 80129 . + 2 transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database CDS 85946 86127 . + 2 transcript_id "g596.t1.1"; gene_id "g596.t1"; chr2L_4027676-4113832 database stop_codon 86125 86127 . + 0 transcript_id "g596.t1.1"; gene_id "g596.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 63 on both strands # start gene g92 chr2L_4027676-4113832 AUGUSTUS gene 44563 52355 0.23 + . g92 chr2L_4027676-4113832 AUGUSTUS transcript 44563 52355 0.23 + . g92.t1 chr2L_4027676-4113832 AUGUSTUS start_codon 44563 44565 . + 0 transcript_id "g92.t1"; gene_id "g92"; chr2L_4027676-4113832 AUGUSTUS intron 44579 46838 0.28 + . transcript_id "g92.t1"; gene_id "g92"; chr2L_4027676-4113832 AUGUSTUS intron 47038 51828 1 + . transcript_id "g92.t1"; gene_id "g92"; chr2L_4027676-4113832 AUGUSTUS intron 52090 52150 1 + . transcript_id "g92.t1"; gene_id "g92"; chr2L_4027676-4113832 AUGUSTUS CDS 44563 44578 0.24 + 0 transcript_id "g92.t1"; gene_id "g92"; chr2L_4027676-4113832 AUGUSTUS CDS 46839 47037 1 + 2 transcript_id "g92.t1"; gene_id "g92"; chr2L_4027676-4113832 AUGUSTUS CDS 51829 52089 1 + 1 transcript_id "g92.t1"; gene_id "g92"; chr2L_4027676-4113832 AUGUSTUS CDS 52151 52355 0.99 + 1 transcript_id "g92.t1"; gene_id "g92"; chr2L_4027676-4113832 AUGUSTUS stop_codon 52353 52355 . + 0 transcript_id "g92.t1"; gene_id "g92"; # protein sequence = [MMRIGSLVALSSTTLADESIDTRENADLTLKCRFNDKYEANDFSFFWTRWTANPAQFDNVAIGEVQLSSGYRLDFQPE # RGIYDLQIKNVSYNRDNGRFECRIKAKGTGADVHQEFHNLTVLTPPHPPVISPGNIAVATEDKPMELTCSSIGGSPDPTITWYREGSNTPLPATVLKG # GTKDQPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNCE] # end gene g92 ### # start gene g93 chr2L_4027676-4113832 AUGUSTUS gene 68579 86127 0.43 + . g93 chr2L_4027676-4113832 AUGUSTUS transcript 68579 86127 0.43 + . g93.t1 chr2L_4027676-4113832 AUGUSTUS start_codon 68579 68581 . + 0 transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS intron 68598 70174 0.53 + . transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS intron 72365 72946 0.85 + . transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS intron 73454 79760 1 + . transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS intron 80130 85945 1 + . transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS CDS 68579 68597 0.53 + 0 transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS CDS 70175 72364 0.87 + 2 transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS CDS 72947 73453 0.98 + 2 transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS CDS 79761 80129 1 + 2 transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS CDS 85946 86127 1 + 2 transcript_id "g93.t1"; gene_id "g93"; chr2L_4027676-4113832 AUGUSTUS stop_codon 86125 86127 . + 0 transcript_id "g93.t1"; gene_id "g93"; # protein sequence = [MKGLFSDYPRVEVGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNGRFISSSLVHTIHRVSVQDAGKYTCIADNGL # GKTGEQELILDILYPPMVVIESKTREAEEGDTVTIRCNVTANPAPVTIEWLKENSPDFRYNGDVLTLTSVRADHAGNYICRAVNIMQSQGMERSERVG # NSTVALLVRHRPGQAYITPNKPVVHVGNGVTLTCSANPPGWPVPQYRWFRDMDGEFSSTQKILAQGPQYSIPKAHLGNEGKYHCHAVNELGIGMMATI # VLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAKGKPAPSVKWLKDAVEILPEENLYEVQTNPDQGLNGMVTVQSQLKFRGKARPNGNALVPGDRGLY # TCLYQNEVNSANSSMQLRIEHEPIVLHQYNKVAFDIRETAEVVCKVQAYPKPEFQWQFGNNPSPLTMSSDGHYEISTTTDNNDIYTSVLKINSLTHSD # YGEYTCRVANTLDTIRAPIRLQQKGPPEKPTNLRATEVGHNYVSLSWDPGFDGGLSKTKFFVSYRRVAMPREEQLIPDCATLANSNSAWVEVDCQRDI # PCKVTALEQHQSYAFKVKALNPKSDSPYSSEIMVTTKVSRIPPPLQVTYEPNTRTLGIDVGATCLNLVAVVESMVNADSPMAAWEVVTTMDNLQLSGN # GPTHKEKIIDRIIGARRVGGGRALGHTISEDEDDNGLNSLALEDENSPTVRVKLCLRTNPEHCGDYTDAEIGRPYIAEANALATPTLIAIIVSCVVFA # LFAGLILMFCRCKRNQSKKSAAAKDYEMDSVRPSIVAAQQNQAPPPYYPASGLDNKALEHSMDLALSMEDQKTALYATQNGYSYHPGSGVVGVGMGGG # VVGVGVGGSVVSGMGGGVGGIGGSGVGVNGIPGLSAHTMPGNEWVNMGYMENNYSNSNNGGSVNSQDSLWQVKMSAAAVGNQQGMVQAPMNQYVEQQP # AYGYDPLTHGGYGAVDDYAPYPHLTATPSQVGDEYHNLRNSQNPSRQDYCSDPYASVQKPKKRVDQHLDSPYHDVSGLPNPYNMEHLEQDEVLPPQQH # MSLSYDDSFEGEYSTTPNARNRRVIREIIV] # end gene g93 ### # # ----- sequence number 64 (length = 10892, name = chr2L_4118008-4128899) ----- # # annotation: # Sequence chr2L_4118008-4128899 length=10892 chr2L_4118008-4128899 database start_codon 3918 3920 . + 0 transcript_id "g599.t1.1"; gene_id "g599.t1"; chr2L_4118008-4128899 database intron 3973 4038 . + . transcript_id "g599.t1.1"; gene_id "g599.t1"; chr2L_4118008-4128899 database intron 4577 4701 . + . transcript_id "g599.t1.1"; gene_id "g599.t1"; chr2L_4118008-4128899 database intron 5472 5530 . + . transcript_id "g599.t1.1"; gene_id "g599.t1"; chr2L_4118008-4128899 database CDS 3918 3972 . + 0 transcript_id "g599.t1.1"; gene_id "g599.t1"; chr2L_4118008-4128899 database CDS 4039 4576 . + 2 transcript_id "g599.t1.1"; gene_id "g599.t1"; chr2L_4118008-4128899 database CDS 4702 5471 . + 1 transcript_id "g599.t1.1"; gene_id "g599.t1"; chr2L_4118008-4128899 database CDS 5531 5892 . + 2 transcript_id "g599.t1.1"; gene_id "g599.t1"; chr2L_4118008-4128899 database stop_codon 5890 5892 . + 0 transcript_id "g599.t1.1"; gene_id "g599.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 64 on both strands # start gene g94 chr2L_4118008-4128899 AUGUSTUS gene 412 5892 0.08 + . g94 chr2L_4118008-4128899 AUGUSTUS transcript 412 5892 0.08 + . g94.t1 chr2L_4118008-4128899 AUGUSTUS start_codon 412 414 . + 0 transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS intron 423 2432 0.31 + . transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS intron 2591 2647 0.99 + . transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS intron 3189 3248 0.98 + . transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS intron 3383 4038 0.59 + . transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS intron 4577 4707 0.95 + . transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS intron 5472 5530 0.98 + . transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS CDS 412 422 0.31 + 0 transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS CDS 2433 2590 0.49 + 1 transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS CDS 2648 3188 0.97 + 2 transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS CDS 3249 3382 0.59 + 1 transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS CDS 4039 4576 1 + 2 transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS CDS 4708 5471 0.76 + 1 transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS CDS 5531 5892 0.98 + 2 transcript_id "g94.t1"; gene_id "g94"; chr2L_4118008-4128899 AUGUSTUS stop_codon 5890 5892 . + 0 transcript_id "g94.t1"; gene_id "g94"; # protein sequence = [MNDCCEPDILLRNGKVTELSSWLLGDSIKFECNPGFSLQGKTWHLGNGNMMKRYCAKAGCNDIEKQANGTILTATDGL # KAEIECDDEFVLSGNSFTYCNGTKWIIKLGTCQLANSVGDHSCDFEREDMCGWRASKAIPQPWKRISAAADFLKEKCLQQDHTFQSDVEGHFIRLQSQ # VHASRTYHFISPIYPRNLTVGHSLWFQFELFMFGSEVRNLTISVKPSSMAVEDMWNSFRNICTKLTVSGDQGPNWKSQSISIDEMESDFQVVFTVVDP # SSLHGDIGRGCARPEDPENGHVENLSLRADVVCHDGYVLVGGRTAYCDGERWSTQLGSCRRSNHTRDHSCDFESEDQCGWEAETTFRRPWKRVSTVSD # IHSLRTGPRHDHTFKNESGGHYMRMETQMGAYGSYHLLSPIYPRSLTLKTACCFRFHYFMFGAGVDNLVVSVKPVSMPMATMWNRFRANKFEISGQQG # TQWLEHTISIDEMQEDFQVIFTATDARSQFGDIAIDDVKLMTGSECGTNGFSTTTEPTAPTGSNEQPLVYDMMSCSGRCGTSISASNITNNGIVMGCG # CNDECLSDETCCLNYLEECTKELLTTTEDDISSLPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKATTTKRTTTTKKPTTTSTTPKP # TTTTSTTPKSTTSTTSTTSTTPTTTTTINVFTTKKTTIMIPTSSTEKTTGINTTMKTRKRITWNVDPQDIEGHMDTSGSTPNPALVVLYLLLAIVLVV # VLANVVNRWIIPITGSKTSSEKAVRFKKAFDSLKKQRKRNSMDDQPLCDSDNDDVEYFEEMGVDIRHRTDL] # end gene g94 ### # # ----- sequence number 65 (length = 6400, name = chr2L_4181416-4187815) ----- # # annotation: # Sequence chr2L_4181416-4187815 length=6400 chr2L_4181416-4187815 database stop_codon 5001 5003 . - 0 transcript_id "g603.t1.1"; gene_id "g603.t1"; chr2L_4181416-4187815 database CDS 5001 6068 . - 0 transcript_id "g603.t1.1"; gene_id "g603.t1"; chr2L_4181416-4187815 database start_codon 6066 6068 . - 0 transcript_id "g603.t1.1"; gene_id "g603.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 65 on both strands # start gene g95 chr2L_4181416-4187815 AUGUSTUS gene 5001 6068 0.97 - . g95 chr2L_4181416-4187815 AUGUSTUS transcript 5001 6068 0.97 - . g95.t1 chr2L_4181416-4187815 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g95.t1"; gene_id "g95"; chr2L_4181416-4187815 AUGUSTUS CDS 5001 6068 0.97 - 0 transcript_id "g95.t1"; gene_id "g95"; chr2L_4181416-4187815 AUGUSTUS start_codon 6066 6068 . - 0 transcript_id "g95.t1"; gene_id "g95"; # protein sequence = [MEGDAENRKDQILERLNKRNKDRQNYLDVKSELRSKETVQNEGVDYFYQTFSQKTMDIEQRLKDVQCGDGQPTDLARN # FADITVEIQDLQRYLTASTMFLPDFKIKSCQNILNTLTAVSDETRQRLLPKKKFGFSGKKTVTKPKVPPNKDIVDAKLSKVPEKLGSNFTWTIANRTN # EHIVLDSAKVNGQDITISKLNHCLVELQGHPGSVQVSRASKCTLLCGPIARSFFAENLEDCTLSIACQQLRLHSSRSIRIYMHVTCRAIIEDCKSIEI # GEYNYDYSKLEADYLASGLNKAQNNYTDVADFNWLSPDVPSPNWSLLKDYPDPNWNALRRDFIANNHNSELKQDVKDISII] # end gene g95 ### # # ----- sequence number 66 (length = 4803, name = chr2L_4388710-4393512) ----- # # annotation: # Sequence chr2L_4388710-4393512 length=4803 chr2L_4388710-4393512 database start_codon 16 18 . + 0 transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database intron 150 1455 . + . transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database intron 1997 2088 . + . transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database intron 2982 3046 . + . transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database intron 3669 3737 . + . transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database CDS 16 149 . + 0 transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database CDS 1456 1996 . + 1 transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database CDS 2089 2981 . + 0 transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database CDS 3047 3668 . + 1 transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database CDS 3738 3977 . + 0 transcript_id "g622.t1.1"; gene_id "g622.t1"; chr2L_4388710-4393512 database stop_codon 3975 3977 . + 0 transcript_id "g622.t1.1"; gene_id "g622.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 66 on both strands # start gene g96 chr2L_4388710-4393512 AUGUSTUS gene 16 3977 0.82 + . g96 chr2L_4388710-4393512 AUGUSTUS transcript 16 3977 0.82 + . g96.t1 chr2L_4388710-4393512 AUGUSTUS start_codon 16 18 . + 0 transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS intron 150 1455 1 + . transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS intron 1997 2088 0.97 + . transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS intron 2982 3046 1 + . transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS intron 3669 3737 1 + . transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS CDS 16 149 0.84 + 0 transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS CDS 1456 1996 1 + 1 transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS CDS 2089 2981 0.97 + 0 transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS CDS 3047 3668 1 + 1 transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS CDS 3738 3977 1 + 0 transcript_id "g96.t1"; gene_id "g96"; chr2L_4388710-4393512 AUGUSTUS stop_codon 3975 3977 . + 0 transcript_id "g96.t1"; gene_id "g96"; # protein sequence = [MPDTEIIVTNAGEPSTKASLIVVSNRLPFVLIRDPKTDELERRASAGGLVTAVCPVVIKGSGLWVGWSGIHLKDPNEA # IPESNPNDQTPTAGLKSEQVVSVNIDSKIFDSYYNGCCNKIFWPLFHSMPGRANFGGEHWHDYVTVNKHFAVRTIEALEKCLAKNQGSEKSPPIVWIH # DYHLMLAANWVREHAEEKNLPCRLAFFLHIPFPPWDIFRLLPWSDEILQGMLGCDLVGFHIQDYCLNFVDCCQRNLGCRVDRNNLLVEHGGRTVRVRP # LPIGIPYERFVNLATTAPKVLKTSKMQIILGVDRLDYTKGLVHRLMAFEALLLKYPQHKEKVSLLQISVPSRTDVKEYRELKEEVDQLVGRINGRFTT # ANWAPIRYIYDYVSQDELAALYRDAAVCLVTPLRDGMNLVAKEFVACQINEVPGVLVISPFAGAGEMMHEALLCNPYEVNEAAEVIHRALTMPEDERV # LRMARLRRREAECDVSHWMRCFLKAVGALEMDDVGTTIMQPVSVDDFDDYLLKYIGYNHKLALLLDYDGTLAPIAPHPDLATLSPEIKNVLYKLSNHS # DVYVAVISGRNVDNVKKMVGIEGITYAGNHGLEILHPDGSKFVHPMPMEYEKKVSDLLKALQDSVCRDGAWVENKGALLTFHYRETPNHLRGAMVDKA # RSLIEKYGFKATEAHCALEARPPVQWNKGRASIYILRTSFGVDWNERIKIIYVGDDLTDEDAMVALKGMARTFRVTSSDIVKTAADHRLPSTDSVYTL # LKWVERHFMGRKARANSLTYRPTKGDGVQMQMSLEVAASANNLEV] # end gene g96 ### # start gene g97 chr2L_4388710-4393512 AUGUSTUS gene 4167 4689 0.93 - . g97 chr2L_4388710-4393512 AUGUSTUS transcript 4167 4689 0.93 - . g97.t1 chr2L_4388710-4393512 AUGUSTUS stop_codon 4167 4169 . - 0 transcript_id "g97.t1"; gene_id "g97"; chr2L_4388710-4393512 AUGUSTUS intron 4280 4332 1 - . transcript_id "g97.t1"; gene_id "g97"; chr2L_4388710-4393512 AUGUSTUS intron 4491 4552 1 - . transcript_id "g97.t1"; gene_id "g97"; chr2L_4388710-4393512 AUGUSTUS CDS 4167 4279 1 - 2 transcript_id "g97.t1"; gene_id "g97"; chr2L_4388710-4393512 AUGUSTUS CDS 4333 4490 1 - 1 transcript_id "g97.t1"; gene_id "g97"; chr2L_4388710-4393512 AUGUSTUS CDS 4553 4689 0.93 - 0 transcript_id "g97.t1"; gene_id "g97"; chr2L_4388710-4393512 AUGUSTUS start_codon 4687 4689 . - 0 transcript_id "g97.t1"; gene_id "g97"; # protein sequence = [MATILQGSSTADSMSDNGPEFAQVFVIVWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLTPVAISLIVCRVILLATQT # RLLFFLRFVTTTIGFAWATYASFVFLGQSQPPHRKPLAVYPIFLFFFIISWLVLSHN] # end gene g97 ### # # ----- sequence number 67 (length = 1424, name = chr2L_4453122-4454545) ----- # # annotation: # Sequence chr2L_4453122-4454545 length=1424 chr2L_4453122-4454545 database stop_codon 170 172 . - 0 transcript_id "g636.t1.1"; gene_id "g636.t1"; chr2L_4453122-4454545 database intron 1145 1205 . - . transcript_id "g636.t1.1"; gene_id "g636.t1"; chr2L_4453122-4454545 database CDS 170 1144 . - 0 transcript_id "g636.t1.1"; gene_id "g636.t1"; chr2L_4453122-4454545 database CDS 1206 1241 . - 0 transcript_id "g636.t1.1"; gene_id "g636.t1"; chr2L_4453122-4454545 database start_codon 1239 1241 . - 0 transcript_id "g636.t1.1"; gene_id "g636.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 67 on both strands # start gene g98 chr2L_4453122-4454545 AUGUSTUS gene 170 1241 0.64 - . g98 chr2L_4453122-4454545 AUGUSTUS transcript 170 1241 0.64 - . g98.t1 chr2L_4453122-4454545 AUGUSTUS stop_codon 170 172 . - 0 transcript_id "g98.t1"; gene_id "g98"; chr2L_4453122-4454545 AUGUSTUS intron 1145 1205 0.65 - . transcript_id "g98.t1"; gene_id "g98"; chr2L_4453122-4454545 AUGUSTUS CDS 170 1144 0.74 - 0 transcript_id "g98.t1"; gene_id "g98"; chr2L_4453122-4454545 AUGUSTUS CDS 1206 1241 0.64 - 0 transcript_id "g98.t1"; gene_id "g98"; chr2L_4453122-4454545 AUGUSTUS start_codon 1239 1241 . - 0 transcript_id "g98.t1"; gene_id "g98"; # protein sequence = [MASVHCQLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHKLNGKPIPGTNP # IVRFRLNSASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDSLGFSKGYGFVRFGIEDEQKSALYDMNGYIGLGTKPIKICN # AVPKPKSELGGAVGEGNTNYGYGSGMTAAGGTDYSQYYDPTSTYWQGYQAWQGYYEQAGASITDAAAYYQQAMSQSHSNPQTLAQHAEAWSAQRSAQY # EQQQQQQTASAANGAEDENGLVEHKFVLDVDKLNREAIDADRRLYDALESSKWLPIEQLEVF] # end gene g98 ### # # ----- sequence number 68 (length = 2526, name = chr2L_4454546-4457071) ----- # # annotation: # Sequence chr2L_4454546-4457071 length=2526 chr2L_4454546-4457071 database start_codon 184 186 . + 0 transcript_id "g637.t1.1"; gene_id "g637.t1"; chr2L_4454546-4457071 database intron 282 342 . + . transcript_id "g637.t1.1"; gene_id "g637.t1"; chr2L_4454546-4457071 database intron 450 510 . + . transcript_id "g637.t1.1"; gene_id "g637.t1"; chr2L_4454546-4457071 database CDS 184 281 . + 0 transcript_id "g637.t1.1"; gene_id "g637.t1"; chr2L_4454546-4457071 database CDS 343 449 . + 1 transcript_id "g637.t1.1"; gene_id "g637.t1"; chr2L_4454546-4457071 database CDS 511 593 . + 2 transcript_id "g637.t1.1"; gene_id "g637.t1"; chr2L_4454546-4457071 database stop_codon 591 593 . + 0 transcript_id "g637.t1.1"; gene_id "g637.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 68 on both strands # start gene g99 chr2L_4454546-4457071 AUGUSTUS gene 184 593 0.99 + . g99 chr2L_4454546-4457071 AUGUSTUS transcript 184 593 0.99 + . g99.t1 chr2L_4454546-4457071 AUGUSTUS start_codon 184 186 . + 0 transcript_id "g99.t1"; gene_id "g99"; chr2L_4454546-4457071 AUGUSTUS intron 282 342 0.99 + . transcript_id "g99.t1"; gene_id "g99"; chr2L_4454546-4457071 AUGUSTUS intron 450 510 1 + . transcript_id "g99.t1"; gene_id "g99"; chr2L_4454546-4457071 AUGUSTUS CDS 184 281 0.99 + 0 transcript_id "g99.t1"; gene_id "g99"; chr2L_4454546-4457071 AUGUSTUS CDS 343 449 1 + 1 transcript_id "g99.t1"; gene_id "g99"; chr2L_4454546-4457071 AUGUSTUS CDS 511 593 1 + 2 transcript_id "g99.t1"; gene_id "g99"; chr2L_4454546-4457071 AUGUSTUS stop_codon 591 593 . + 0 transcript_id "g99.t1"; gene_id "g99"; # protein sequence = [MGITLFRLASFTPKLKELRIILDPKGDTSKGVREYVERFYPNLKKSNPDLPILVRECSGVQPRLYARYGNGKEVSLSL # ANHAAPDIHKNLEAVGK] # end gene g99 ### # start gene g100 chr2L_4454546-4457071 AUGUSTUS gene 781 1444 0.95 - . g100 chr2L_4454546-4457071 AUGUSTUS transcript 781 1444 0.95 - . g100.t1 chr2L_4454546-4457071 AUGUSTUS stop_codon 781 783 . - 0 transcript_id "g100.t1"; gene_id "g100"; chr2L_4454546-4457071 AUGUSTUS intron 1194 1311 1 - . transcript_id "g100.t1"; gene_id "g100"; chr2L_4454546-4457071 AUGUSTUS CDS 781 1193 1 - 2 transcript_id "g100.t1"; gene_id "g100"; chr2L_4454546-4457071 AUGUSTUS CDS 1312 1444 0.95 - 0 transcript_id "g100.t1"; gene_id "g100"; chr2L_4454546-4457071 AUGUSTUS start_codon 1442 1444 . - 0 transcript_id "g100.t1"; gene_id "g100"; # protein sequence = [MGTTDQRSAEIAITECQLPITTGDYLKRYSQMCHERFHNVPLLEGAERLLRHLHANKVPFCLATSSGADMVELKTAQH # RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPNGVTAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGL # PAFTD] # end gene g100 ### # start gene g101 chr2L_4454546-4457071 AUGUSTUS gene 1492 2526 0.45 - . g101 chr2L_4454546-4457071 AUGUSTUS transcript 1492 2526 0.45 - . g101.t1 chr2L_4454546-4457071 AUGUSTUS stop_codon 1492 1494 . - 0 transcript_id "g101.t1"; gene_id "g101"; chr2L_4454546-4457071 AUGUSTUS intron 1788 1840 1 - . transcript_id "g101.t1"; gene_id "g101"; chr2L_4454546-4457071 AUGUSTUS intron 1926 2526 0.49 - . transcript_id "g101.t1"; gene_id "g101"; chr2L_4454546-4457071 AUGUSTUS CDS 1492 1787 0.95 - 2 transcript_id "g101.t1"; gene_id "g101"; chr2L_4454546-4457071 AUGUSTUS CDS 1841 1925 0.49 - 0 transcript_id "g101.t1"; gene_id "g101"; # protein sequence = [SEENCCEMANKVLRKVTHCVFDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVEHYELPMS # WEEYARQQRANTEILMRNAQLMPGTNPSSRFAVTFQTRRGYTRRSPGK] # end gene g101 ### # # ----- sequence number 69 (length = 2691, name = chr2L_4457072-4459762) ----- # # annotation: # Sequence chr2L_4457072-4459762 length=2691 chr2L_4457072-4459762 database stop_codon 1933 1935 . - 0 transcript_id "g641.t1.1"; gene_id "g641.t1"; chr2L_4457072-4459762 database intron 2137 2194 . - . transcript_id "g641.t1.1"; gene_id "g641.t1"; chr2L_4457072-4459762 database intron 2359 2412 . - . transcript_id "g641.t1.1"; gene_id "g641.t1"; chr2L_4457072-4459762 database CDS 1933 2136 . - 0 transcript_id "g641.t1.1"; gene_id "g641.t1"; chr2L_4457072-4459762 database CDS 2195 2358 . - 2 transcript_id "g641.t1.1"; gene_id "g641.t1"; chr2L_4457072-4459762 database CDS 2413 2476 . - 0 transcript_id "g641.t1.1"; gene_id "g641.t1"; chr2L_4457072-4459762 database start_codon 2474 2476 . - 0 transcript_id "g641.t1.1"; gene_id "g641.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 69 on both strands # start gene g102 chr2L_4457072-4459762 AUGUSTUS gene 310 1220 0.67 - . g102 chr2L_4457072-4459762 AUGUSTUS transcript 310 1220 0.67 - . g102.t1 chr2L_4457072-4459762 AUGUSTUS stop_codon 310 312 . - 0 transcript_id "g102.t1"; gene_id "g102"; chr2L_4457072-4459762 AUGUSTUS intron 439 668 1 - . transcript_id "g102.t1"; gene_id "g102"; chr2L_4457072-4459762 AUGUSTUS intron 987 1217 0.67 - . transcript_id "g102.t1"; gene_id "g102"; chr2L_4457072-4459762 AUGUSTUS CDS 310 438 1 - 0 transcript_id "g102.t1"; gene_id "g102"; chr2L_4457072-4459762 AUGUSTUS CDS 669 986 1 - 0 transcript_id "g102.t1"; gene_id "g102"; chr2L_4457072-4459762 AUGUSTUS CDS 1218 1220 0.67 - 0 transcript_id "g102.t1"; gene_id "g102"; chr2L_4457072-4459762 AUGUSTUS start_codon 1218 1220 . - 0 transcript_id "g102.t1"; gene_id "g102"; # protein sequence = [MSNIKRKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDK # LWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA] # end gene g102 ### # start gene g103 chr2L_4457072-4459762 AUGUSTUS gene 1933 2476 0.67 - . g103 chr2L_4457072-4459762 AUGUSTUS transcript 1933 2476 0.67 - . g103.t1 chr2L_4457072-4459762 AUGUSTUS stop_codon 1933 1935 . - 0 transcript_id "g103.t1"; gene_id "g103"; chr2L_4457072-4459762 AUGUSTUS intron 2137 2194 1 - . transcript_id "g103.t1"; gene_id "g103"; chr2L_4457072-4459762 AUGUSTUS intron 2359 2412 0.99 - . transcript_id "g103.t1"; gene_id "g103"; chr2L_4457072-4459762 AUGUSTUS CDS 1933 2136 0.7 - 0 transcript_id "g103.t1"; gene_id "g103"; chr2L_4457072-4459762 AUGUSTUS CDS 2195 2358 1 - 2 transcript_id "g103.t1"; gene_id "g103"; chr2L_4457072-4459762 AUGUSTUS CDS 2413 2476 0.96 - 0 transcript_id "g103.t1"; gene_id "g103"; chr2L_4457072-4459762 AUGUSTUS start_codon 2474 2476 . - 0 transcript_id "g103.t1"; gene_id "g103"; # protein sequence = [MSFNIMQKLTMQCLKADQPLMTTVRNASKKTGGSTRNKKGHARPKHRGWRVQDGHHVSEGTILATQLTTRFHPGLNVG # FGRNGTLFAMEHGKVYVTCEAIDPNWDHTWIQRNYAGRQGQNIYKKFFNVVPENQHQRFRLVEEI] # end gene g103 ### # # ----- sequence number 70 (length = 13372, name = chr2L_4874021-4887392) ----- # # annotation: # Sequence chr2L_4874021-4887392 length=13372 chr2L_4874021-4887392 database stop_codon 5001 5003 . - 0 transcript_id "g685.t1.1"; gene_id "g685.t1"; chr2L_4874021-4887392 database intron 5177 6357 . - . transcript_id "g685.t1.1"; gene_id "g685.t1"; chr2L_4874021-4887392 database intron 6453 7194 . - . transcript_id "g685.t1.1"; gene_id "g685.t1"; chr2L_4874021-4887392 database CDS 5001 5176 . - 2 transcript_id "g685.t1.1"; gene_id "g685.t1"; chr2L_4874021-4887392 database CDS 6358 6452 . - 1 transcript_id "g685.t1.1"; gene_id "g685.t1"; chr2L_4874021-4887392 database CDS 7195 8372 . - 0 transcript_id "g685.t1.1"; gene_id "g685.t1"; chr2L_4874021-4887392 database start_codon 8370 8372 . - 0 transcript_id "g685.t1.1"; gene_id "g685.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 70 on both strands # start gene g104 chr2L_4874021-4887392 AUGUSTUS gene 60 1064 0.84 + . g104 chr2L_4874021-4887392 AUGUSTUS transcript 60 1064 0.84 + . g104.t1 chr2L_4874021-4887392 AUGUSTUS start_codon 60 62 . + 0 transcript_id "g104.t1"; gene_id "g104"; chr2L_4874021-4887392 AUGUSTUS intron 150 866 0.85 + . transcript_id "g104.t1"; gene_id "g104"; chr2L_4874021-4887392 AUGUSTUS CDS 60 149 0.97 + 0 transcript_id "g104.t1"; gene_id "g104"; chr2L_4874021-4887392 AUGUSTUS CDS 867 1064 1 + 0 transcript_id "g104.t1"; gene_id "g104"; chr2L_4874021-4887392 AUGUSTUS stop_codon 1062 1064 . + 0 transcript_id "g104.t1"; gene_id "g104"; # protein sequence = [MKNKTLRQDNPHISKRRGGRKAGHRRFSLQALSAKHRSNKHHQDIEITEAEPSRTPEDSVCSAEGPTDTYAEISGVSH # SMLSHSMVSHSVVSHSK] # end gene g104 ### # start gene g105 chr2L_4874021-4887392 AUGUSTUS gene 5001 8372 0.3 - . g105 chr2L_4874021-4887392 AUGUSTUS transcript 5001 8372 0.3 - . g105.t1 chr2L_4874021-4887392 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g105.t1"; gene_id "g105"; chr2L_4874021-4887392 AUGUSTUS intron 5177 6357 0.3 - . transcript_id "g105.t1"; gene_id "g105"; chr2L_4874021-4887392 AUGUSTUS intron 6453 7194 0.3 - . transcript_id "g105.t1"; gene_id "g105"; chr2L_4874021-4887392 AUGUSTUS CDS 5001 5176 0.97 - 2 transcript_id "g105.t1"; gene_id "g105"; chr2L_4874021-4887392 AUGUSTUS CDS 6358 6452 0.3 - 1 transcript_id "g105.t1"; gene_id "g105"; chr2L_4874021-4887392 AUGUSTUS CDS 7195 8372 0.3 - 0 transcript_id "g105.t1"; gene_id "g105"; chr2L_4874021-4887392 AUGUSTUS start_codon 8370 8372 . - 0 transcript_id "g105.t1"; gene_id "g105"; # protein sequence = [MIKSTTNPQEQRLPRPEDQSPAPPPPPPSSATTSTAAPATPTHQVATVIANMDTLKTAFLPNLSMDPNVHVSPHYCPM # CHQQFERPQHVADHMQLCHGITLNAQGAIATLDGGHPQAQQHPKLSHPCFNCDEKFGNAVDLDEHHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYK # CTQCGSICTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQHQQQQQQQQQQQELLEQQQREMQEQAQQQQVHHH # QQDQDLAGDQVALKVPPLTVKLNKNANGGAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANPGVPAPASSGVLVGTQTVPADLAHKIRHKCPDCP # KTFKTPGTLAMHRKIHTGEADATPKERPYTCSYCGKSFTQSNTLKQHTRIHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCDKRFTQRS # ALTVHTTKLHPL] # end gene g105 ### # start gene g106 chr2L_4874021-4887392 AUGUSTUS gene 9627 11489 0.99 + . g106 chr2L_4874021-4887392 AUGUSTUS transcript 9627 11489 0.99 + . g106.t1 chr2L_4874021-4887392 AUGUSTUS start_codon 9627 9629 . + 0 transcript_id "g106.t1"; gene_id "g106"; chr2L_4874021-4887392 AUGUSTUS intron 10320 10370 1 + . transcript_id "g106.t1"; gene_id "g106"; chr2L_4874021-4887392 AUGUSTUS CDS 9627 10319 0.99 + 0 transcript_id "g106.t1"; gene_id "g106"; chr2L_4874021-4887392 AUGUSTUS CDS 10371 11489 1 + 0 transcript_id "g106.t1"; gene_id "g106"; chr2L_4874021-4887392 AUGUSTUS stop_codon 11487 11489 . + 0 transcript_id "g106.t1"; gene_id "g106"; # protein sequence = [MSSPWVKTSEPVQQVNLADIMSEQYAHKLHDKELQRHTEKLKRPDEQIAPVWGSQASSPPAPNAQSIQSDAEDWEDYS # ALLNDEGNVAEDIQLPEDSDAVIAQLLQSQFDHEYNEELRRIERQQNKQSKVTVTLNKFLRDGDAEFLHDTAEDDYEEDELEQQKHDWDRFEDNERQL # DSIPRCGFKVNKEGEMITKHDPQLCAVRNAQRVMSFPPEFPTGDAAGFDMKLSNKVFNQLRAHSRRGRSDKHEKVATAEMGLDAGTRLLLYKLINNQI # LEQINGIISTGKEAVILHANSDANYTGSNEHGHQSGVLVPPQLLPRECAIKIFKTTLNEFKQRDRYIKDDYRFKDRFSKQNHRVIINMWAEKEMHNLM # RMQAIGLNVPDVVVLKKHVLVMRFIGDNHNAAPKLKDARLSDAELSCAYEEIVAAMHKLYNEAKLVHADMSEYNILWFEGKCWFIDVAQSVEPKHPSA # LEFLMRDCGNIVNFFERRGLPNIYTKEQLFEFITGLNSEVHTAAQLEQIHTRGASISQATAPNQEECPDELKPLEYPFELAWEKSQQDRAAQKALQQA # QDNNDNKTDTDKDQETDDNENDSDDKEKINKTANH] # end gene g106 ### # # ----- sequence number 71 (length = 1635, name = chr2L_4953719-4955353) ----- # # annotation: # Sequence chr2L_4953719-4955353 length=1635 chr2L_4953719-4955353 database stop_codon 605 607 . - 0 transcript_id "g703.t1.1"; gene_id "g703.t1"; chr2L_4953719-4955353 database CDS 605 1405 . - 0 transcript_id "g703.t1.1"; gene_id "g703.t1"; chr2L_4953719-4955353 database start_codon 1403 1405 . - 0 transcript_id "g703.t1.1"; gene_id "g703.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 71 on both strands # start gene g107 chr2L_4953719-4955353 AUGUSTUS gene 605 1405 1 - . g107 chr2L_4953719-4955353 AUGUSTUS transcript 605 1405 1 - . g107.t1 chr2L_4953719-4955353 AUGUSTUS stop_codon 605 607 . - 0 transcript_id "g107.t1"; gene_id "g107"; chr2L_4953719-4955353 AUGUSTUS CDS 605 1405 1 - 0 transcript_id "g107.t1"; gene_id "g107"; chr2L_4953719-4955353 AUGUSTUS start_codon 1403 1405 . - 0 transcript_id "g107.t1"; gene_id "g107"; # protein sequence = [MKVFVVLALALAAVSAETVQQVHPKDLPKDTKINGRIVNGYPAYEGKAPYTVGLGFSGNGGWWCGGSIIAHDWVLTAA # HCTNGASQVTIYYGATWRTNAQFTHTVGSGDFIQNHNWPNQNGNDIALIRTPHVDFWHMVNKVELPSFNDRYNMYDNYWAVACGWGLTTAGSQPDWME # CVDLQIISNSECSRTYGTQPDGILCVSTSGGKSTCSGDSGGPLVLHDGGRLVGVTSWVSGNGCTAGLPSGFTRVTNQLDWIRDNSGVAYY] # end gene g107 ### # # ----- sequence number 72 (length = 2321, name = chr2L_4971555-4973875) ----- # # annotation: # Sequence chr2L_4971555-4973875 length=2321 chr2L_4971555-4973875 database start_codon 258 260 . + 0 transcript_id "g711.t1.1"; gene_id "g711.t1"; chr2L_4971555-4973875 database CDS 258 2060 . + 0 transcript_id "g711.t1.1"; gene_id "g711.t1"; chr2L_4971555-4973875 database stop_codon 2058 2060 . + 0 transcript_id "g711.t1.1"; gene_id "g711.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 72 on both strands # start gene g108 chr2L_4971555-4973875 AUGUSTUS gene 258 2060 0.96 + . g108 chr2L_4971555-4973875 AUGUSTUS transcript 258 2060 0.96 + . g108.t1 chr2L_4971555-4973875 AUGUSTUS start_codon 258 260 . + 0 transcript_id "g108.t1"; gene_id "g108"; chr2L_4971555-4973875 AUGUSTUS CDS 258 2060 0.96 + 0 transcript_id "g108.t1"; gene_id "g108"; chr2L_4971555-4973875 AUGUSTUS stop_codon 2058 2060 . + 0 transcript_id "g108.t1"; gene_id "g108"; # protein sequence = [MVIPKEILSDFKELYEKANRLVEEESRNDPPTDPFRSHYKARDVLIVLKKQLDDQLVSVQASEEDGGQDDRCYHSLLA # FVCRDLGRIYIYTEEQAEGEKMLNRCLELVTPFKECPEGIIPFIGAINELSIVLASKEEYNKGLEILLEAEKIYEDFKASGLKPLAIQDVFNPPEEGQ # QSHEAGPKELESLYTLVSFYMAQMYGHLGEPEKSAKCCHRTLHRQLESKTYDPIDFALNTATLSQFYIGEKRFEEARHHLAAATLIMAEYEVHMLEPE # MSEKQRQDVSETFKHRYADVARCWAKYGLYLMNTSKLRLMRDEDDEDAKNLEIVLRNMRLVEAEQSRFPGLDLTACENRISCEYCLTFDDAKLVFHFV # NEWLDIAKDYYKAENEATEYSKIMQDYAEAYEHIAFFEENPENQAKMQKRRAKYLEDLLDLLDPIFYMKICRECWYGAGTAHAAVMDVRLDIIRATST # PAPEDIKKVNQSCMKAIKHFESYVKSYLVKPPSEEWRPNMDVEEQRHMLYAHFHIGRIYYKLISGHPLQQLEHLTSCHTYYQRFDAGCQLHKEAAETL # QGEIGVVREMLQLLPLKINTIKARLNKAGLTA] # end gene g108 ### # # ----- sequence number 73 (length = 1537, name = chr2L_5038935-5040471) ----- # # annotation: # Sequence chr2L_5038935-5040471 length=1537 chr2L_5038935-5040471 database start_codon 177 179 . + 0 transcript_id "g730.t1.1"; gene_id "g730.t1"; chr2L_5038935-5040471 database intron 807 874 . + . transcript_id "g730.t1.1"; gene_id "g730.t1"; chr2L_5038935-5040471 database CDS 177 806 . + 0 transcript_id "g730.t1.1"; gene_id "g730.t1"; chr2L_5038935-5040471 database CDS 875 1126 . + 0 transcript_id "g730.t1.1"; gene_id "g730.t1"; chr2L_5038935-5040471 database stop_codon 1124 1126 . + 0 transcript_id "g730.t1.1"; gene_id "g730.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 73 on both strands # start gene g109 chr2L_5038935-5040471 AUGUSTUS gene 177 1126 0.73 + . g109 chr2L_5038935-5040471 AUGUSTUS transcript 177 1126 0.73 + . g109.t1 chr2L_5038935-5040471 AUGUSTUS start_codon 177 179 . + 0 transcript_id "g109.t1"; gene_id "g109"; chr2L_5038935-5040471 AUGUSTUS intron 807 874 1 + . transcript_id "g109.t1"; gene_id "g109"; chr2L_5038935-5040471 AUGUSTUS CDS 177 806 0.89 + 0 transcript_id "g109.t1"; gene_id "g109"; chr2L_5038935-5040471 AUGUSTUS CDS 875 1126 0.82 + 0 transcript_id "g109.t1"; gene_id "g109"; chr2L_5038935-5040471 AUGUSTUS stop_codon 1124 1126 . + 0 transcript_id "g109.t1"; gene_id "g109"; # protein sequence = [MSDVEVDPQQAHPHPIAAIAPRRRRPTGRRGGVTGGLSSGSLDASSSTSPPPRFCPLPNGVEDNWTWSKRHRSKEVVL # RGPNSRTVHFHPNWSKGTAGVQGKRSLNNGRHYWELHVSQRVFGTSIMFGIGTKSARLHANAFRNMLGENEHGWGLSHKGVLWHEGVALLYTKRFREN # QPTQIGVLFDGIEGTLTFYKDGKCLGVAFRGLDQIDEPLYPIVCSTAAKTEMTLKCTRREFVNLQDRCRAVIMRRVRSAAQLEKLKLPLPIADYLSEV # IDEKKPLRQVDNYDILCDL] # end gene g109 ### # # ----- sequence number 74 (length = 2506, name = chr2L_5047040-5049545) ----- # # annotation: # Sequence chr2L_5047040-5049545 length=2506 chr2L_5047040-5049545 database start_codon 65 67 . + 0 transcript_id "g734.t1.1"; gene_id "g734.t1"; chr2L_5047040-5049545 database intron 168 233 . + . transcript_id "g734.t1.1"; gene_id "g734.t1"; chr2L_5047040-5049545 database intron 441 503 . + . transcript_id "g734.t1.1"; gene_id "g734.t1"; chr2L_5047040-5049545 database CDS 65 167 . + 0 transcript_id "g734.t1.1"; gene_id "g734.t1"; chr2L_5047040-5049545 database CDS 234 440 . + 2 transcript_id "g734.t1.1"; gene_id "g734.t1"; chr2L_5047040-5049545 database CDS 504 739 . + 2 transcript_id "g734.t1.1"; gene_id "g734.t1"; chr2L_5047040-5049545 database stop_codon 737 739 . + 0 transcript_id "g734.t1.1"; gene_id "g734.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 74 on both strands # start gene g110 chr2L_5047040-5049545 AUGUSTUS gene 65 739 0.95 + . g110 chr2L_5047040-5049545 AUGUSTUS transcript 65 739 0.95 + . g110.t1 chr2L_5047040-5049545 AUGUSTUS start_codon 65 67 . + 0 transcript_id "g110.t1"; gene_id "g110"; chr2L_5047040-5049545 AUGUSTUS intron 168 233 1 + . transcript_id "g110.t1"; gene_id "g110"; chr2L_5047040-5049545 AUGUSTUS intron 441 503 0.95 + . transcript_id "g110.t1"; gene_id "g110"; chr2L_5047040-5049545 AUGUSTUS CDS 65 167 1 + 0 transcript_id "g110.t1"; gene_id "g110"; chr2L_5047040-5049545 AUGUSTUS CDS 234 440 0.95 + 2 transcript_id "g110.t1"; gene_id "g110"; chr2L_5047040-5049545 AUGUSTUS CDS 504 739 1 + 2 transcript_id "g110.t1"; gene_id "g110"; chr2L_5047040-5049545 AUGUSTUS stop_codon 737 739 . + 0 transcript_id "g110.t1"; gene_id "g110"; # protein sequence = [MDPHSADNCKCHKQTQPAQQTLSDMDFDRGIWNAAIYNEVERVREFIKKGQSMARDDCDYTALHYAARNGNEPICKLL # LDEGKADVNAVTKAGATALHRAAMMGHLEIVKLLVEHKANLLLQDESGQTALHRAVMRGHLEVCRILLAKEPTLKLVKDKKDKIAFEYIMENANDDFK # LLLKP] # end gene g110 ### # start gene g111 chr2L_5047040-5049545 AUGUSTUS gene 1325 2506 0.93 - . g111 chr2L_5047040-5049545 AUGUSTUS transcript 1325 2506 0.93 - . g111.t1 chr2L_5047040-5049545 AUGUSTUS stop_codon 1325 1327 . - 0 transcript_id "g111.t1"; gene_id "g111"; chr2L_5047040-5049545 AUGUSTUS intron 1681 1751 0.98 - . transcript_id "g111.t1"; gene_id "g111"; chr2L_5047040-5049545 AUGUSTUS CDS 1325 1680 0.96 - 2 transcript_id "g111.t1"; gene_id "g111"; chr2L_5047040-5049545 AUGUSTUS CDS 1752 2506 0.95 - 1 transcript_id "g111.t1"; gene_id "g111"; # protein sequence = [LLLQTNININDTDDDGETPLMAAIACSMLDVAEELVKRGARINIQDKQNHTALQYAVRGRHTQMAKLLLERGARRLAS # QHLLHLAVESNVKELVELLLQYGESLSVWNLKNFTPIMLAIHRGRHEMLEYLLNVAEEQRKLGLYSDVHDEGLVLFAVQQNFWVKEFSRILRVLLAKS # PSARNDFYDSCAPTIVCGLIYCHTPLSRAINLHRLEVAEFLIHEGCNLAQICREHVVNELRSNCTPTRLAFARLLCNAGFQFPHKHRPLPKDWPPARL # EFEREMCLLGTQPRSLQSLARLEIRRSLLRCLQTRPEVQERYLPTQERSSLGRIVDEFAIPATLKRYLSDFDELPPVRGMEPVDIPVVKWTESWD] # end gene g111 ### # # ----- sequence number 75 (length = 1615, name = chr2L_5052910-5054524) ----- # # annotation: # Sequence chr2L_5052910-5054524 length=1615 chr2L_5052910-5054524 database start_codon 175 177 . + 0 transcript_id "g737.t1.1"; gene_id "g737.t1"; chr2L_5052910-5054524 database intron 260 329 . + . transcript_id "g737.t1.1"; gene_id "g737.t1"; chr2L_5052910-5054524 database intron 448 505 . + . transcript_id "g737.t1.1"; gene_id "g737.t1"; chr2L_5052910-5054524 database CDS 175 259 . + 0 transcript_id "g737.t1.1"; gene_id "g737.t1"; chr2L_5052910-5054524 database CDS 330 447 . + 2 transcript_id "g737.t1.1"; gene_id "g737.t1"; chr2L_5052910-5054524 database CDS 506 1469 . + 1 transcript_id "g737.t1.1"; gene_id "g737.t1"; chr2L_5052910-5054524 database stop_codon 1467 1469 . + 0 transcript_id "g737.t1.1"; gene_id "g737.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 75 on both strands # start gene g112 chr2L_5052910-5054524 AUGUSTUS gene 175 1469 0.69 + . g112 chr2L_5052910-5054524 AUGUSTUS transcript 175 1469 0.69 + . g112.t1 chr2L_5052910-5054524 AUGUSTUS start_codon 175 177 . + 0 transcript_id "g112.t1"; gene_id "g112"; chr2L_5052910-5054524 AUGUSTUS intron 260 329 0.69 + . transcript_id "g112.t1"; gene_id "g112"; chr2L_5052910-5054524 AUGUSTUS intron 448 505 1 + . transcript_id "g112.t1"; gene_id "g112"; chr2L_5052910-5054524 AUGUSTUS CDS 175 259 0.69 + 0 transcript_id "g112.t1"; gene_id "g112"; chr2L_5052910-5054524 AUGUSTUS CDS 330 447 1 + 2 transcript_id "g112.t1"; gene_id "g112"; chr2L_5052910-5054524 AUGUSTUS CDS 506 1469 1 + 1 transcript_id "g112.t1"; gene_id "g112"; chr2L_5052910-5054524 AUGUSTUS stop_codon 1467 1469 . + 0 transcript_id "g112.t1"; gene_id "g112"; # protein sequence = [MSTNWRELFPTKLTFVIFLLYMSLFIGQGIFVTASQESNNSYGYNTVTVVLLTEVFKLIVSTCLYCRDNNLRSLVRDV # QKDRNVLGLYMVPAFLYCLYNNLAFVNLATFDPTTYYLLLQLRVVVTGILFQIIFKKYLSQRQWISLILLTLGCMMKQVDFGSFYSDANDDSESAAIQ # QQLQSHNKTTSAETHAHGKNMSGFDFSLSAVFILAQTICSCLAGVYNEYLLKDKGADVNIFVQNVFMYLDSIVCNAVILLLRGELLDAFSPQNLGSIM # RFSVLIIIVNNAAIGIVTSFFLKYMNSILKTFASALELLFTAVLCYFLFSIPIYMNTALAIAVVSYAIYLYTQSPVVNLGKVRPLSNLSDATTKSTDK # RKLIDEEAAESDLDMV] # end gene g112 ### # # ----- sequence number 76 (length = 7168, name = chr2L_5101470-5108637) ----- # # annotation: # Sequence chr2L_5101470-5108637 length=7168 chr2L_5101470-5108637 database start_codon 1329 1331 . + 0 transcript_id "g749.t1.1"; gene_id "g749.t1"; chr2L_5101470-5108637 database CDS 1329 2168 . + 0 transcript_id "g749.t1.1"; gene_id "g749.t1"; chr2L_5101470-5108637 database stop_codon 2166 2168 . + 0 transcript_id "g749.t1.1"; gene_id "g749.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 76 on both strands # start gene g113 chr2L_5101470-5108637 AUGUSTUS gene 1329 2190 0.35 + . g113 chr2L_5101470-5108637 AUGUSTUS transcript 1329 2190 0.35 + . g113.t1 chr2L_5101470-5108637 AUGUSTUS start_codon 1329 1331 . + 0 transcript_id "g113.t1"; gene_id "g113"; chr2L_5101470-5108637 AUGUSTUS intron 2128 2185 0.35 + . transcript_id "g113.t1"; gene_id "g113"; chr2L_5101470-5108637 AUGUSTUS CDS 1329 2127 0.82 + 0 transcript_id "g113.t1"; gene_id "g113"; chr2L_5101470-5108637 AUGUSTUS CDS 2186 2190 0.35 + 2 transcript_id "g113.t1"; gene_id "g113"; chr2L_5101470-5108637 AUGUSTUS stop_codon 2188 2190 . + 0 transcript_id "g113.t1"; gene_id "g113"; # protein sequence = [MSGQQPPPYGNGPRGWNPRAHNPASPSPSSFLYRPPSPWTTAPSPPPIISGPRPYGHAMSPAPINQVRGQRGSTNIPH # PRPQWPGGNQSPAPYQQPAPGAGGAYYGGMASSGGASPAPRPYRPAPLQHQNSYGAQPTSSFQLSPTPSPIVCQTPSSDFNYSNRQTPLSHHQYQQQP # PQFYQQQGAPVIPPQPRQHGGQGGHGGHGLAQDQIDFVGVPLEPPQPKSYVIYDDEEEFGPSTAEIIANQSQDYIDEKLAEYQMTILQLQD] # end gene g113 ### # # ----- sequence number 77 (length = 9819, name = chr2L_5205439-5215257) ----- # # annotation: # Sequence chr2L_5205439-5215257 length=9819 chr2L_5205439-5215257 database start_codon 5001 5003 . + 0 transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database intron 5258 5312 . + . transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database intron 5452 5515 . + . transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database intron 5624 5752 . + . transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database intron 6384 6442 . + . transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database intron 6713 6774 . + . transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database CDS 5001 5257 . + 0 transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database CDS 5313 5451 . + 1 transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database CDS 5516 5623 . + 0 transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database CDS 5753 6383 . + 0 transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database CDS 6443 6712 . + 2 transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database CDS 6775 6941 . + 2 transcript_id "g754.t1.1"; gene_id "g754.t1"; chr2L_5205439-5215257 database stop_codon 6939 6941 . + 0 transcript_id "g754.t1.1"; gene_id "g754.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 77 on both strands # start gene g114 chr2L_5205439-5215257 AUGUSTUS gene 1870 3781 0.64 + . g114 chr2L_5205439-5215257 AUGUSTUS transcript 1870 3781 0.64 + . g114.t1 chr2L_5205439-5215257 AUGUSTUS start_codon 1870 1872 . + 0 transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS intron 2064 2219 0.88 + . transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS intron 2359 2419 1 + . transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS intron 2528 2584 0.82 + . transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS intron 3213 3282 0.95 + . transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS intron 3556 3617 0.91 + . transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS CDS 1870 2063 0.87 + 0 transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS CDS 2220 2358 0.96 + 1 transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS CDS 2420 2527 0.82 + 0 transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS CDS 2585 3212 0.81 + 0 transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS CDS 3283 3555 0.92 + 2 transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS CDS 3618 3781 0.93 + 2 transcript_id "g114.t1"; gene_id "g114"; chr2L_5205439-5215257 AUGUSTUS stop_codon 3779 3781 . + 0 transcript_id "g114.t1"; gene_id "g114"; # protein sequence = [MCPVTTFLVLVLTLLVLVYVFLTWNFNYWRKRGIKTAPTWPFVGSFPSIFTRKRNIAYDIDDIYEKYKDTDNMVGVFT # TRVPQLLVMCPEYIHKIYATDFRSFHNNEWRNFVNKKTDMILGNNPFVLTGDEWKERRSEIMPALSPNRVKAVYPVSQSVCKKFVEYIRRQQQMATSE # GLDAMDLSLCYTTEVVSDCGLGVSAQSFTDTPTPLLKMIKRVFNTSFEFIFYSVVTNLWQKVRKFYSVPFFNKETEVFFLDIIRRCITLRLEKPEQQR # DDFLNYMLQLQEKKGLHTDNILINTMTFILDGFETTALVLAHIMLMLGRNPEEQDKVRKEIGSADLTFDQMSELPHLDACIYETLRLFSPQVAARKLV # TEPFEFANKNGRTVHLKPGDVVTIPVKALHHDPQYYEDPLTFKPERFLESNGGGMKSYRDRGVYLAFGDGPRHCPGMRFALTQLKAALVEILRNFEIK # VNPKTRSDNQIDDTFFMATLKGGIYLDFKDL] # end gene g114 ### # start gene g115 chr2L_5205439-5215257 AUGUSTUS gene 5064 6941 0.56 + . g115 chr2L_5205439-5215257 AUGUSTUS transcript 5064 6941 0.56 + . g115.t1 chr2L_5205439-5215257 AUGUSTUS start_codon 5064 5066 . + 0 transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS intron 5258 5312 0.98 + . transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS intron 5452 5752 1 + . transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS intron 6384 6442 1 + . transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS intron 6713 6774 0.68 + . transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS CDS 5064 5257 0.84 + 0 transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS CDS 5313 5451 0.98 + 1 transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS CDS 5753 6383 1 + 0 transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS CDS 6443 6712 0.68 + 2 transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS CDS 6775 6941 0.68 + 2 transcript_id "g115.t1"; gene_id "g115"; chr2L_5205439-5215257 AUGUSTUS stop_codon 6939 6941 . + 0 transcript_id "g115.t1"; gene_id "g115"; # protein sequence = [MCPISTALFVIAAILALIYVFLTWNFSYWKKRGIPTAKSWPFVGSFPSVFTQKRNVVYDIDEIYEQYKNTDSIVGVFQ # TRIPQLMVTTPEYAHKIYVSDFRSFHDNEMAKFVKAAYPVSLRVCKKFVEYIRRQSLMAPAQGLNAKDLCLCYTTEVISDCVLGISAQSFTDNPTPMV # GMTKRVFEQSFGFIFYTVVANLWPPITKFYSVSLFAKDVAAFFYDLMQKCIQVRRESPAAQQRDDFLNYMLQLQEKKGLNAAELTSHTMTFLTDGFET # TAQVLTHTLLFLARNPKEQMKLREEIGTAELTFEQISELPFTEACIHETLRIFSPVLAARKVVTEPCELTNKNGVSVKLRPGDVVIIPVNALHHDPQY # YEEPQSFKPERFLNINGGAKKYRDQGLFFGFGDGPRICPGMRFSLTQIKAALVEIVRNFDIKVNPKTRKDNEIDDTYFMPALKGGVWLDFVERN] # end gene g115 ### # start gene g116 chr2L_5205439-5215257 AUGUSTUS gene 7051 9115 0.31 - . g116 chr2L_5205439-5215257 AUGUSTUS transcript 7051 9115 0.31 - . g116.t1 chr2L_5205439-5215257 AUGUSTUS stop_codon 7051 7053 . - 0 transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS intron 7225 7594 0.71 - . transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS intron 7895 7949 1 - . transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS intron 8203 8251 1 - . transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS intron 8346 8398 0.82 - . transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS intron 8586 8878 0.47 - . transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS CDS 7051 7224 0.9 - 0 transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS CDS 7595 7894 0.71 - 0 transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS CDS 7950 8202 1 - 1 transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS CDS 8252 8345 1 - 2 transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS CDS 8399 8585 0.47 - 0 transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS CDS 8879 9115 0.49 - 0 transcript_id "g116.t1"; gene_id "g116"; chr2L_5205439-5215257 AUGUSTUS start_codon 9113 9115 . - 0 transcript_id "g116.t1"; gene_id "g116"; # protein sequence = [MTAKVIAAIKNTKSYEPIYKELQKLVCNPSVDTHDMRNTLEDAIKSAGLETEIRNIVYNLVRTRLSKTDDKNLANKQG # AKPTVSDPLGYLKRAGVLWDRRVRKSLNAMCTELKVPLHGQPRISADREDFMAKWNELSNYNMDLANYRPVYAPKDLLEVLLSLKGPAKTTENTDQIP # QWEFSHIALPVKNLFELRAHYADLLRSDSYLGVPDLTVQCQRILEARHAPMCQQFLKKGCTPAPYRGALWASVLDSKLHDYDIEYWQKLRNAVWTTDH # IVDKLVFKDIQLTASNDDQYFVFEDVLYQVLLCFSRDTDIGGCVEYETFPVKGKTYEGPPSGVVPFHGICMFAAPFCYLYDSPILGFDSLEILPLFAI # IILSFRKESIMQVASLDSIEAILADLSSIKVLPLVQLALSRD] # end gene g116 ### # # ----- sequence number 78 (length = 11097, name = chr2L_5267678-5278774) ----- # # annotation: # Sequence chr2L_5267678-5278774 length=11097 chr2L_5267678-5278774 database stop_codon 5001 5003 . - 0 transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database intron 5252 5308 . - . transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database intron 5421 5483 . - . transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database intron 5878 6341 . - . transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database intron 8104 8834 . - . transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database intron 9055 9258 . - . transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database intron 9504 10256 . - . transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database CDS 5001 5251 . - 2 transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database CDS 5309 5420 . - 0 transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database CDS 5484 5877 . - 1 transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database CDS 6342 8103 . - 2 transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database CDS 8835 9054 . - 0 transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database CDS 9259 9503 . - 2 transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database CDS 10257 10512 . - 0 transcript_id "g764.t1.1"; gene_id "g764.t1"; chr2L_5267678-5278774 database start_codon 10510 10512 . - 0 transcript_id "g764.t1.1"; gene_id "g764.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 78 on both strands # start gene g117 chr2L_5267678-5278774 AUGUSTUS gene 1 2624 0.78 + . g117 chr2L_5267678-5278774 AUGUSTUS transcript 1 2624 0.78 + . g117.t1 chr2L_5267678-5278774 AUGUSTUS intron 428 1683 0.78 + . transcript_id "g117.t1"; gene_id "g117"; chr2L_5267678-5278774 AUGUSTUS CDS 1 427 0.79 + 0 transcript_id "g117.t1"; gene_id "g117"; chr2L_5267678-5278774 AUGUSTUS CDS 1684 2624 0.98 + 2 transcript_id "g117.t1"; gene_id "g117"; chr2L_5267678-5278774 AUGUSTUS stop_codon 2622 2624 . + 0 transcript_id "g117.t1"; gene_id "g117"; # protein sequence = [EADGQIDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEIKYLPDDSDDISVFQFNELVYMECVIKE # SLRLFPSVPFIGRRCVEEGVVNGLIMPKNTQINIHLYEIMRDARHFSNPKMFQPDRFFPENTVNQTALGVKLDDMSEGNEYRKAIHDFEIVFNQRMCN # PLMFFNWYFFLFGDYKKYSRILRTIHGFSSGIIQRKRQQFKQKQLGQVDEFGKKQRYAMLDTLLAAEAEGKIDHQGICDEVNTFMFGGYDTTSTSLIF # TLLLLALHADVQERCYEELQDLPEDIDEVSMFQFNELIHLECVIKESLRLFPSAPIIGRTCIEESVMNGLVLPKNAQISIHIYDIMRDARHFPKPNQF # LPERFLPENSVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFKLLPATQLEDLTFENGIVLRTQQNIKVKFEARVK] # end gene g117 ### # start gene g118 chr2L_5267678-5278774 AUGUSTUS gene 5001 10512 0.67 - . g118 chr2L_5267678-5278774 AUGUSTUS transcript 5001 10512 0.67 - . g118.t1 chr2L_5267678-5278774 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS intron 5252 5308 1 - . transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS intron 5421 5483 1 - . transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS intron 5914 6341 0.78 - . transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS intron 8104 8834 1 - . transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS intron 9055 9258 0.99 - . transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS intron 9504 10280 0.87 - . transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS CDS 5001 5251 1 - 2 transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS CDS 5309 5420 1 - 0 transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS CDS 5484 5913 0.78 - 1 transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS CDS 6342 8103 1 - 2 transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS CDS 8835 9054 0.99 - 0 transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS CDS 9259 9503 1 - 2 transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS CDS 10281 10512 0.87 - 0 transcript_id "g118.t1"; gene_id "g118"; chr2L_5267678-5278774 AUGUSTUS start_codon 10510 10512 . - 0 transcript_id "g118.t1"; gene_id "g118"; # protein sequence = [MEVSADPYEQKLYQMFRSCETQCGLLDEKSLLKLCSLLELRDQGSALIASLGGSHQLGVSFGQFKEALLNFLGSEFDE # RSLVITDEPLNNTYIESPPESSDREVSPKLVVGTKKYGRRSRPQQGIYELSVTDSDNTDEDQLQQQQNQRSLNGCDELGVQVQRSSSQSDLPGSRRLR # SVHTSGSKLKRCASLPARRKMNSNTTGATTSPTAAAKLKQLSIQSQAQHSSSVESLDTVTPQQLETISVHSIMEAWELASIPNTRNLLHVLGFDEEEE # VNLQQLTKALEEELRGIDGDHEQSNMLRALAALQATELGNYRLAYRQQHEENLKLRADNKAANQRVALLAVEVDERHASLEDNSKKQVQQLEQRHASM # VREITLRMTNDRDHWTSMTGKLEAQLKSLEQEEIRLRTELELVRTENTELESEQQKAHIQITELLEQNIKLNQELAQTSSSIGGTPEHSPLRPRRHSE # DKEEEMLQLMEKLAALQMENAQLRDKTDELTIEIESLNVELIRSKTKAKKQEKQEKQEDQESAATATKRRGDSPSKTHLTEESPRLGKQRKCTEGEQS # DASNSGDWLALNSELQRSQSQDEELTSLRQRVAELEEELKAAKEGRSLTPESRSKELETSLEQMQRAYEDCEDYWQTKLSEERQLFEKERQIYEDEQH # ESDKKFTELMEKVREYEEQFSKDGRLSPIDERDMLEQQYSELEAEAAQLRSSSIQMLEEKAQEISSLQSEIEDLRQRLGESVEILTGACELTSESVAQ # LSAEAGKSPASSPISYLWLQSTIQEPAKSLADSKDEATASAIELLGGSPSHKTASRNNLTTSETSIFSTTPFESSQSGPSPTNSGNSNAYGANPGPAP # ISKPKRSQSPQQAAASEGEIADCETSSTASGKSFESNSKTSCLSHEKCSSPSALKEELKRLKFFELSLKEQIKDLSLQRDGLVMELQQLQEARPVLEK # AYARTTHPTLQQRLNQLELRNRHLQNVIKQQQHYTESLMQQSWRQHQVELNDLHSRIETQGVLLADQTQRLQSADILVKDLYVENSHLTATVQRLEQQ # RARVNLIHQQQQQQRLVGGGLPGMP] # end gene g118 ### # # ----- sequence number 79 (length = 4789, name = chr2L_5544869-5549657) ----- # # annotation: # Sequence chr2L_5544869-5549657 length=4789 chr2L_5544869-5549657 database start_codon 2947 2949 . + 0 transcript_id "g796.t1.1"; gene_id "g796.t1"; chr2L_5544869-5549657 database intron 3045 3104 . + . transcript_id "g796.t1.1"; gene_id "g796.t1"; chr2L_5544869-5549657 database intron 3233 3299 . + . transcript_id "g796.t1.1"; gene_id "g796.t1"; chr2L_5544869-5549657 database intron 3842 4575 . + . transcript_id "g796.t1.1"; gene_id "g796.t1"; chr2L_5544869-5549657 database CDS 2947 3044 . + 0 transcript_id "g796.t1.1"; gene_id "g796.t1"; chr2L_5544869-5549657 database CDS 3105 3232 . + 1 transcript_id "g796.t1.1"; gene_id "g796.t1"; chr2L_5544869-5549657 database CDS 3300 3841 . + 2 transcript_id "g796.t1.1"; gene_id "g796.t1"; chr2L_5544869-5549657 database CDS 4576 4626 . + 0 transcript_id "g796.t1.1"; gene_id "g796.t1"; chr2L_5544869-5549657 database stop_codon 4624 4626 . + 0 transcript_id "g796.t1.1"; gene_id "g796.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 79 on both strands # start gene g119 chr2L_5544869-5549657 AUGUSTUS gene 1 640 1 + . g119 chr2L_5544869-5549657 AUGUSTUS transcript 1 640 1 + . g119.t1 chr2L_5544869-5549657 AUGUSTUS CDS 1 640 1 + 1 transcript_id "g119.t1"; gene_id "g119"; chr2L_5544869-5549657 AUGUSTUS stop_codon 638 640 . + 0 transcript_id "g119.t1"; gene_id "g119"; # protein sequence = [NITPATNTATVQSFSQSLRNSTRATPSRRTPSAAVKRKRAVVDESEDHSVADYYVSASAKGNVEIKEIDPEGKFVRLF # NKGSEEVAIGGWQLQRLINEKGPSTTYKFHRSVRIEPNGVITVWSADTKASHEPPSSLVMKSQKWVSADNTRTILLNSEGEAVANLDRIKRIVSQHTS # SSRLSRRRSVTAVDGNEQLYHQQGDPQQSNEKCAIM] # end gene g119 ### # start gene g120 chr2L_5544869-5549657 AUGUSTUS gene 2947 4626 0.86 + . g120 chr2L_5544869-5549657 AUGUSTUS transcript 2947 4626 0.86 + . g120.t1 chr2L_5544869-5549657 AUGUSTUS start_codon 2947 2949 . + 0 transcript_id "g120.t1"; gene_id "g120"; chr2L_5544869-5549657 AUGUSTUS intron 3045 3104 1 + . transcript_id "g120.t1"; gene_id "g120"; chr2L_5544869-5549657 AUGUSTUS intron 3233 3299 1 + . transcript_id "g120.t1"; gene_id "g120"; chr2L_5544869-5549657 AUGUSTUS intron 3842 4575 0.86 + . transcript_id "g120.t1"; gene_id "g120"; chr2L_5544869-5549657 AUGUSTUS CDS 2947 3044 1 + 0 transcript_id "g120.t1"; gene_id "g120"; chr2L_5544869-5549657 AUGUSTUS CDS 3105 3232 1 + 1 transcript_id "g120.t1"; gene_id "g120"; chr2L_5544869-5549657 AUGUSTUS CDS 3300 3841 0.86 + 2 transcript_id "g120.t1"; gene_id "g120"; chr2L_5544869-5549657 AUGUSTUS CDS 4576 4626 0.86 + 0 transcript_id "g120.t1"; gene_id "g120"; chr2L_5544869-5549657 AUGUSTUS stop_codon 4624 4626 . + 0 transcript_id "g120.t1"; gene_id "g120"; # protein sequence = [MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQYVKTFNMDEYVGLA # RDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGGVELFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAQDTLEANARFFDN # DMSKVPKQALTVGVGTVMDSKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFKSLMDVHSKLIEQQKTT] # end gene g120 ### # # ----- sequence number 80 (length = 11731, name = chr2L_5663949-5675679) ----- # # annotation: # Sequence chr2L_5663949-5675679 length=11731 chr2L_5663949-5675679 database start_codon 5001 5003 . + 0 transcript_id "g812.t1.1"; gene_id "g812.t1"; chr2L_5663949-5675679 database CDS 5001 6731 . + 0 transcript_id "g812.t1.1"; gene_id "g812.t1"; chr2L_5663949-5675679 database stop_codon 6729 6731 . + 0 transcript_id "g812.t1.1"; gene_id "g812.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 80 on both strands # start gene g121 chr2L_5663949-5675679 AUGUSTUS gene 5001 6731 0.53 + . g121 chr2L_5663949-5675679 AUGUSTUS transcript 5001 6731 0.53 + . g121.t1 chr2L_5663949-5675679 AUGUSTUS start_codon 5001 5003 . + 0 transcript_id "g121.t1"; gene_id "g121"; chr2L_5663949-5675679 AUGUSTUS CDS 5001 6731 0.53 + 0 transcript_id "g121.t1"; gene_id "g121"; chr2L_5663949-5675679 AUGUSTUS stop_codon 6729 6731 . + 0 transcript_id "g121.t1"; gene_id "g121"; # protein sequence = [MMRMFRYTNTLQRTAKISHVLWARNYAKDVRFGPEVRAMMLQGVDVLADAVAVTMGPKGRNVIIEQSWGSPKITKDGV # TVAKSIALKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISRGASPVEIRRGVMLAIETVKDNLRRLSRPVNTPEEICQVATISA # NGDKSVGNLISEAIKKVGRDGVITVKDGKTLCDELEVIEGMKFDRGYISPYFINTSKGAKVEFQDALLLFCEKKIKSAPSIVPALELANAQRKPLVII # AEDLEAEALSTLVVNRLKVGLQVCAVKAPGFGDNRKENLMDMAVATGGIVFGDEANMVRLEDIKMSDFGRVGEVVVSKDDTMLLKGKGQKAEVEKRVE # GLREAIKESTSSYEKEKMQERLARLSSGVALLRVGGSSDVEVSEKKDRVIDALNATRAAVEEGIVPGGGTALLRCIQKLNDLKGANEDQNMGIEIIRR # ALRMPCLTIAKNAGVDGAMVVAKVEILDGDYGYDALKGEYGNMIERGIIDPTKVVRTAISDAAGVASLLTTAEAVVTELPLEEAAAAGAAAGLGALGG # MGMGGMGM] # end gene g121 ### # # ----- sequence number 81 (length = 6336, name = chr2L_5795870-5802205) ----- # # annotation: # Sequence chr2L_5795870-5802205 length=6336 chr2L_5795870-5802205 database stop_codon 5001 5003 . - 0 transcript_id "g830.t1.1"; gene_id "g830.t1"; chr2L_5795870-5802205 database intron 5740 5802 . - . transcript_id "g830.t1.1"; gene_id "g830.t1"; chr2L_5795870-5802205 database CDS 5001 5739 . - 1 transcript_id "g830.t1.1"; gene_id "g830.t1"; chr2L_5795870-5802205 database CDS 5803 6137 . - 0 transcript_id "g830.t1.1"; gene_id "g830.t1"; chr2L_5795870-5802205 database start_codon 6135 6137 . - 0 transcript_id "g830.t1.1"; gene_id "g830.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 81 on both strands # start gene g122 chr2L_5795870-5802205 AUGUSTUS gene 5001 6017 1 - . g122 chr2L_5795870-5802205 AUGUSTUS transcript 5001 6017 1 - . g122.t1 chr2L_5795870-5802205 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g122.t1"; gene_id "g122"; chr2L_5795870-5802205 AUGUSTUS intron 5740 5802 1 - . transcript_id "g122.t1"; gene_id "g122"; chr2L_5795870-5802205 AUGUSTUS CDS 5001 5739 1 - 1 transcript_id "g122.t1"; gene_id "g122"; chr2L_5795870-5802205 AUGUSTUS CDS 5803 6017 1 - 0 transcript_id "g122.t1"; gene_id "g122"; chr2L_5795870-5802205 AUGUSTUS start_codon 6015 6017 . - 0 transcript_id "g122.t1"; gene_id "g122"; # protein sequence = [MSGQKHLRLRYYTSLEEAMLLRLWREHLHAIPSYTDNLPIFREIAHGLQQNGVRLNKQEARRRINSYRNKYLNDRNRV # GGNANFAKDWRLYALIDCLFCPAWPSSALFHFRNVLETIRATARVDLPALPPLLYTSPAQLKFERDSEGCTFLDAQPLVPAVVKTEPLPDEHHQLVNI # EYKPTVTQLENAASHYLERATAESVIQRSPLTPANHILPEAEDAPYGGHTNGGQTDAERSASKRRRGRRSILPHSGKITMAIVEALRKENSLLEQQND # ACLQSLVRKEKQFLDMKHNFLAYMERQEAVLALIKQTTIKLEP] # end gene g122 ### # # ----- sequence number 82 (length = 10708, name = chr2L_5888021-5898728) ----- # # annotation: # Sequence chr2L_5888021-5898728 length=10708 chr2L_5888021-5898728 database stop_codon 5001 5003 . - 0 transcript_id "g838.t1.1"; gene_id "g838.t1"; chr2L_5888021-5898728 database CDS 5001 5708 . - 0 transcript_id "g838.t1.1"; gene_id "g838.t1"; chr2L_5888021-5898728 database start_codon 5706 5708 . - 0 transcript_id "g838.t1.1"; gene_id "g838.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 82 on both strands # (none) # # ----- sequence number 83 (length = 4930, name = chr2L_5959972-5964901) ----- # # annotation: # Sequence chr2L_5959972-5964901 length=4930 chr2L_5959972-5964901 database stop_codon 3167 3169 . - 0 transcript_id "g854.t1.1"; gene_id "g854.t1"; chr2L_5959972-5964901 database CDS 3167 4312 . - 0 transcript_id "g854.t1.1"; gene_id "g854.t1"; chr2L_5959972-5964901 database start_codon 4310 4312 . - 0 transcript_id "g854.t1.1"; gene_id "g854.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 83 on both strands # start gene g123 chr2L_5959972-5964901 AUGUSTUS gene 1 288 0.83 - . g123 chr2L_5959972-5964901 AUGUSTUS transcript 1 288 0.83 - . g123.t1 chr2L_5959972-5964901 AUGUSTUS CDS 1 288 0.83 - 0 transcript_id "g123.t1"; gene_id "g123"; chr2L_5959972-5964901 AUGUSTUS start_codon 286 288 . - 0 transcript_id "g123.t1"; gene_id "g123"; # protein sequence = [MKSFVCIALVAFAAAALASPTNVASATGSTGSSVTTQDGELEGVTGQGFGDLTRLRKSAYGGSSGGYGGSSIPAPPCP # KNYLFSCQPNLAPVPCSA] # end gene g123 ### # start gene g124 chr2L_5959972-5964901 AUGUSTUS gene 3167 4309 0.87 - . g124 chr2L_5959972-5964901 AUGUSTUS transcript 3167 4309 0.87 - . g124.t1 chr2L_5959972-5964901 AUGUSTUS stop_codon 3167 3169 . - 0 transcript_id "g124.t1"; gene_id "g124"; chr2L_5959972-5964901 AUGUSTUS CDS 3167 4309 0.87 - 0 transcript_id "g124.t1"; gene_id "g124"; chr2L_5959972-5964901 AUGUSTUS start_codon 4307 4309 . - 0 transcript_id "g124.t1"; gene_id "g124"; # protein sequence = [MMHSRNRSWTLTLLALGVVLATSAEDLPRSNRIAVPGEPLYYLMADAGPVVTPNEALKRTNRSLLKWWDDLFPRNNNN # CCNNNNNNLLYPTAPLLPAPAVPNNCNGLQLQDLDPFKQMKLFKKLPELFPTASPCGQCGGGCGQNNYVAPAPQSPSYGGDGYGVLPNGGYIKPDTEY # NGPGDGDAGYVAPAAPAYEAPAPPAPAYEAPAPPAPAYEAPAPAAPAYEAPAPAAPAYEAPTTDYSAPAPPAPAYEPPASSYTQGYSQPAQPSYVGAP # PAQIVYQPIIYLSTPLASKSSTSQVEYDDQKYVTPTAPPPPPPPAPVYEAPSQNCYQPAAPPAPNYATPSCQTPIRLSLIDQPYRVAPELFEEYNYRL # ALASQNIL] # end gene g124 ### # # ----- sequence number 84 (length = 10534, name = chr2L_6043110-6053643) ----- # # annotation: # Sequence chr2L_6043110-6053643 length=10534 chr2L_6043110-6053643 database stop_codon 5001 5003 . - 0 transcript_id "g880.t1.1"; gene_id "g880.t1"; chr2L_6043110-6053643 database CDS 5001 5534 . - 0 transcript_id "g880.t1.1"; gene_id "g880.t1"; chr2L_6043110-6053643 database start_codon 5532 5534 . - 0 transcript_id "g880.t1.1"; gene_id "g880.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 84 on both strands # start gene g125 chr2L_6043110-6053643 AUGUSTUS gene 1 2408 0.87 - . g125 chr2L_6043110-6053643 AUGUSTUS transcript 1 2408 0.87 - . g125.t1 chr2L_6043110-6053643 AUGUSTUS intron 1243 1318 1 - . transcript_id "g125.t1"; gene_id "g125"; chr2L_6043110-6053643 AUGUSTUS CDS 1 1242 0.97 - 2 transcript_id "g125.t1"; gene_id "g125"; chr2L_6043110-6053643 AUGUSTUS CDS 1319 2408 0.9 - 0 transcript_id "g125.t1"; gene_id "g125"; chr2L_6043110-6053643 AUGUSTUS start_codon 2406 2408 . - 0 transcript_id "g125.t1"; gene_id "g125"; # protein sequence = [MVILRYYDVQAHSAAEEESVLRRLREEDGAVVSVRMERCYHLEYSAQAEHSLALDELLVWLVKQPLSKGQSLSRQPAL # QSTGSSQLLLEIGPRFNFSTPYSTNCVNIFQNLGYSEVRRMETSTRYLVTFGEGSKAPEAARFVPLLGDRMTQCLYTEENTPKASFDEQLPERQANWH # FVPVLEEGRAALERINQELGLAFNDYDLDYYHDLFAKELGRNPTTVELFDCAQSNSEHSRHWFFRGRMVIDGVEQPKSLIRMIMDTQAHTNPNNTIKF # SDNSSAMVGFDHQTIVPSSVVAPGAVRLQSVQSDLIFTAETHNMPTAVAPFSGATTGTGGRLRDVQGVGRGGVPIAGTAGYCVGALHIPGYKQPYEPL # DFKYPATFAPPLQVLIEASNGASDYGNKFGEPVISGFALSYGLNSAADASQRDEYVKPIMFSGGLGTMPATMREKLPPARGQLLAKIGGPVYRIGVGG # GAASSVEIQGSGDAELDFNAVQRGDAEMENKLNRVVRACLDLGEQNPILAIHDQGAGGNGNVLKELVEPGFAGAVIFSKEFQLGDPTITALELWGAEY # QENNAILCNADQRELLEKICRRERCPISFVGVVTGDGRVTLLEKPAPKDLEQALNASNRSEVSPFDLELKYVLGDMPKRTYDLKREQTPLKELSLPKG # LLLDEALERVLSLVAVGSKRFLTNKVDRCVGGLIAQQQCVGPLQAPLADYALTTVSHFSHSGIATSIGTQPLKGLLDPAAMARMCVAEALSNLVFVKI # SELADVKCSGNWM] # end gene g125 ### # start gene g126 chr2L_6043110-6053643 AUGUSTUS gene 3944 5534 0.86 - . g126 chr2L_6043110-6053643 AUGUSTUS transcript 3944 5534 0.86 - . g126.t1 chr2L_6043110-6053643 AUGUSTUS stop_codon 3944 3946 . - 0 transcript_id "g126.t1"; gene_id "g126"; chr2L_6043110-6053643 AUGUSTUS intron 4672 5020 0.88 - . transcript_id "g126.t1"; gene_id "g126"; chr2L_6043110-6053643 AUGUSTUS CDS 3944 4671 0.86 - 2 transcript_id "g126.t1"; gene_id "g126"; chr2L_6043110-6053643 AUGUSTUS CDS 5021 5534 0.88 - 0 transcript_id "g126.t1"; gene_id "g126"; chr2L_6043110-6053643 AUGUSTUS start_codon 5532 5534 . - 0 transcript_id "g126.t1"; gene_id "g126"; # protein sequence = [MSYLLTEIALEMLGYKFYDTNGTFHLTNFQNNSTLSETHPDEPSLQEFIEYTNEELKQDAQQQEPHTLAVQEESYLDA # PTIPESRYARRTPAKALAKIMDYESEKIVNQISTRLEGSVSRRAAADSDEQLAEIINEERKLIEADAEVIHNFRELVESRLQRLDKRPYEKYVRSAQP # ASRLPIKDIKPSPDGDDNGACIMKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHTHRLVQSKWYFPKWTHALIGTAKTCFA # SERSTVDPERKQMVLKTNNLTFCRNISVDEVLYYEPHPSDASKTLLKQEATVTVFGVPLSHYMEDLLTSTISTNAGKGRQGLEWVIGLINTEVKGIAR # GTDELLHNTRRSIDEVTESARKSMDEISAQAAKAAKAMHIT] # end gene g126 ### # start gene g127 chr2L_6043110-6053643 AUGUSTUS gene 5768 7239 0.86 + . g127 chr2L_6043110-6053643 AUGUSTUS transcript 5768 7239 0.86 + . g127.t1 chr2L_6043110-6053643 AUGUSTUS start_codon 5768 5770 . + 0 transcript_id "g127.t1"; gene_id "g127"; chr2L_6043110-6053643 AUGUSTUS intron 5829 5901 1 + . transcript_id "g127.t1"; gene_id "g127"; chr2L_6043110-6053643 AUGUSTUS intron 6238 6304 1 + . transcript_id "g127.t1"; gene_id "g127"; chr2L_6043110-6053643 AUGUSTUS intron 6524 6964 0.9 + . transcript_id "g127.t1"; gene_id "g127"; chr2L_6043110-6053643 AUGUSTUS CDS 5768 5828 1 + 0 transcript_id "g127.t1"; gene_id "g127"; chr2L_6043110-6053643 AUGUSTUS CDS 5902 6237 1 + 2 transcript_id "g127.t1"; gene_id "g127"; chr2L_6043110-6053643 AUGUSTUS CDS 6305 6523 1 + 2 transcript_id "g127.t1"; gene_id "g127"; chr2L_6043110-6053643 AUGUSTUS CDS 6965 7239 0.86 + 2 transcript_id "g127.t1"; gene_id "g127"; chr2L_6043110-6053643 AUGUSTUS stop_codon 7237 7239 . + 0 transcript_id "g127.t1"; gene_id "g127"; # protein sequence = [MKINEKNLYVFARTPPFDMEGFLNKRGEVNKAFQRRYFVLKGNLLFYFESRLDKEPLGLIIVEGCTIELSNEVDNYCF # EIAFNGNRTYILAAENQDSMETWMKALTCAGYEYKRIILAELKRQLQEMEDARNKMLGSALDGPQNASESAKPRPPPRRTNPFNRPAPPPPDSSLRGG # VVMSPLPFINGYFGSSNARLQQEKLMSKQDANGNGSPSGTPRAQRRPTPAPAIANSVFYPDVRDPGAANNNHSTVNGAERQRRQVKALEEFARNHERF # RRELMPDVSAYRERQGQPLIQL] # end gene g127 ### # start gene g128 chr2L_6043110-6053643 AUGUSTUS gene 8569 10149 0.96 + . g128 chr2L_6043110-6053643 AUGUSTUS transcript 8569 10149 0.96 + . g128.t1 chr2L_6043110-6053643 AUGUSTUS start_codon 8569 8571 . + 0 transcript_id "g128.t1"; gene_id "g128"; chr2L_6043110-6053643 AUGUSTUS intron 8914 8970 1 + . transcript_id "g128.t1"; gene_id "g128"; chr2L_6043110-6053643 AUGUSTUS intron 9553 9612 1 + . transcript_id "g128.t1"; gene_id "g128"; chr2L_6043110-6053643 AUGUSTUS CDS 8569 8913 0.96 + 0 transcript_id "g128.t1"; gene_id "g128"; chr2L_6043110-6053643 AUGUSTUS CDS 8971 9552 1 + 0 transcript_id "g128.t1"; gene_id "g128"; chr2L_6043110-6053643 AUGUSTUS CDS 9613 10149 1 + 0 transcript_id "g128.t1"; gene_id "g128"; chr2L_6043110-6053643 AUGUSTUS stop_codon 10147 10149 . + 0 transcript_id "g128.t1"; gene_id "g128"; # protein sequence = [MSAKRKAGGNGAGPNKRRPKKKESDYEDEFSDESDDDGVQQQAAAANQMEVLIPHDDLDPPSKLPEDLLATLEKTPGQ # MLIAGMVTWDLTGKRDRKNVTKVRPNLYSFHRFTEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAV # GRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFET # SPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLL # FLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH # EATKQKYEKMPEYTIDD] # end gene g128 ### # # ----- sequence number 85 (length = 1367, name = chr2L_6330954-6332320) ----- # # annotation: # Sequence chr2L_6330954-6332320 length=1367 chr2L_6330954-6332320 database start_codon 116 118 . + 0 transcript_id "g919.t1.1"; gene_id "g919.t1"; chr2L_6330954-6332320 database CDS 116 394 . + 0 transcript_id "g919.t1.1"; gene_id "g919.t1"; chr2L_6330954-6332320 database stop_codon 392 394 . + 0 transcript_id "g919.t1.1"; gene_id "g919.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 85 on both strands # (none) # # ----- sequence number 86 (length = 8663, name = chr2L_6363141-6371803) ----- # # annotation: # Sequence chr2L_6363141-6371803 length=8663 chr2L_6363141-6371803 database start_codon 5001 5003 . + 0 transcript_id "g928.t1.1"; gene_id "g928.t1"; chr2L_6363141-6371803 database CDS 5001 6959 . + 0 transcript_id "g928.t1.1"; gene_id "g928.t1"; chr2L_6363141-6371803 database stop_codon 6957 6959 . + 0 transcript_id "g928.t1.1"; gene_id "g928.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 86 on both strands # start gene g129 chr2L_6363141-6371803 AUGUSTUS gene 5001 6959 0.99 + . g129 chr2L_6363141-6371803 AUGUSTUS transcript 5001 6959 0.99 + . g129.t1 chr2L_6363141-6371803 AUGUSTUS start_codon 5001 5003 . + 0 transcript_id "g129.t1"; gene_id "g129"; chr2L_6363141-6371803 AUGUSTUS CDS 5001 6959 0.99 + 0 transcript_id "g129.t1"; gene_id "g129"; chr2L_6363141-6371803 AUGUSTUS stop_codon 6957 6959 . + 0 transcript_id "g129.t1"; gene_id "g129"; # protein sequence = [MVQNLWTALLLLGSATCGSSVPVKANDPEQSCPYLGECNSTINQQHIDTLMSYVDSEKNPCEDFYAYACGKWRAKHGS # HTTATMISESQINRQYEDLFLQLLRNPSAPEYGYPMFAKVLAHYQSCIALEKPDLRRYIELLDRDLLASLNSTHWMHLLAALGRYGYHGHYVQVEVRW # YNATHHMIFLLPHNRHLNLSLTQDIYDALSQDGSSWPPLHQLQEQFRSLEQNLVRLAKPHSADDTFRNYSLDQIRTEVPGLHWDEALRTQLGRSVPGN # HVFQVDDLDAIEGLVEYLNTVDTLLLNRYSLARFLSHLLELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVYERSFYSRRRHADELVIHSVFQQ # LQSQLELRVQHNAFNLSQDLVKSLQAKVHQMRINVGNLPPNVTEQFYWDSDRRWSVGRDFYENHLNSLLYYYTLVADLESSSDQEERDIWYSFNMHTP # EFPDNIDATPYFYCLGNIIFVPYSYVKRPFFDANFWPALLYGDLANTLGHEIMHAFDTDLVDYDAQGNLRNFSDQLGEVELYNGAVGCLNSSAVMLNE # RTSDVSGSRLAMQTYGGDWLTRSGNGRLYFLQFAHFFCGDEGDQYHDSGSQRLNYALGQVPQFAEVFRCHVGSGMTSADQCPFW] # end gene g129 ### # # ----- sequence number 87 (length = 10401, name = chr2L_6463845-6474245) ----- # # annotation: # Sequence chr2L_6463845-6474245 length=10401 chr2L_6463845-6474245 database stop_codon 5001 5003 . - 0 transcript_id "g947.t1.1"; gene_id "g947.t1"; chr2L_6463845-6474245 database intron 6116 7483 . - . transcript_id "g947.t1.1"; gene_id "g947.t1"; chr2L_6463845-6474245 database intron 7871 9786 . - . transcript_id "g947.t1.1"; gene_id "g947.t1"; chr2L_6463845-6474245 database CDS 5001 6115 . - 2 transcript_id "g947.t1.1"; gene_id "g947.t1"; chr2L_6463845-6474245 database CDS 7484 7870 . - 2 transcript_id "g947.t1.1"; gene_id "g947.t1"; chr2L_6463845-6474245 database CDS 9787 9847 . - 0 transcript_id "g947.t1.1"; gene_id "g947.t1"; chr2L_6463845-6474245 database start_codon 9845 9847 . - 0 transcript_id "g947.t1.1"; gene_id "g947.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 87 on both strands # start gene g130 chr2L_6463845-6474245 AUGUSTUS gene 2680 3764 0.51 - . g130 chr2L_6463845-6474245 AUGUSTUS transcript 2680 3764 0.51 - . g130.t1 chr2L_6463845-6474245 AUGUSTUS stop_codon 2680 2682 . - 0 transcript_id "g130.t1"; gene_id "g130"; chr2L_6463845-6474245 AUGUSTUS intron 2921 2974 1 - . transcript_id "g130.t1"; gene_id "g130"; chr2L_6463845-6474245 AUGUSTUS intron 3496 3554 0.92 - . transcript_id "g130.t1"; gene_id "g130"; chr2L_6463845-6474245 AUGUSTUS CDS 2680 2920 1 - 1 transcript_id "g130.t1"; gene_id "g130"; chr2L_6463845-6474245 AUGUSTUS CDS 2975 3495 0.92 - 0 transcript_id "g130.t1"; gene_id "g130"; chr2L_6463845-6474245 AUGUSTUS CDS 3555 3764 0.55 - 0 transcript_id "g130.t1"; gene_id "g130"; chr2L_6463845-6474245 AUGUSTUS start_codon 3762 3764 . - 0 transcript_id "g130.t1"; gene_id "g130"; # protein sequence = [MLRQLTRSMGPTSRLLKQVNYGTNAPAGTHIPVTKALEIGQWEEKLKAAGVEDRKFNVKCIVSHVLKQKFSSVPDSFD # QLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTSPSVFIPRPETEEFMRLVIDDHKNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE # RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRP # GGKLWLELGNDHPPMVKTIMNLKYEGRLKFIAGYSDQYQRERFVQIEKV] # end gene g130 ### # start gene g131 chr2L_6463845-6474245 AUGUSTUS gene 5001 7820 0.96 - . g131 chr2L_6463845-6474245 AUGUSTUS transcript 5001 7820 0.96 - . g131.t1 chr2L_6463845-6474245 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g131.t1"; gene_id "g131"; chr2L_6463845-6474245 AUGUSTUS intron 6116 7483 1 - . transcript_id "g131.t1"; gene_id "g131"; chr2L_6463845-6474245 AUGUSTUS CDS 5001 6115 1 - 2 transcript_id "g131.t1"; gene_id "g131"; chr2L_6463845-6474245 AUGUSTUS CDS 7484 7820 0.96 - 0 transcript_id "g131.t1"; gene_id "g131"; chr2L_6463845-6474245 AUGUSTUS start_codon 7818 7820 . - 0 transcript_id "g131.t1"; gene_id "g131"; # protein sequence = [MTDYLSLHSRLAQVGQEHLLKFWPELTNDERIDLVRDIEELNLDEIKLYFDRATVSMNENGIKLDDRLQPLPEGKLIS # IARAPLEKLDAYRDEGLLQISNGHVAVLLMAGGQGTRLGFDHPKGMYDVGLQSRKTLFRIQAERILKLEELAQEANGKRGHITWYIMTSEHTVQPTYD # YFVANNFFGLKAENVLLFEQGSLPCFEYDGRIILDEKHRVARAPDGNGGIYRAMKRQGILDDMQKRGVLYLHAHSVDNILIKVADPVFIGYCVQEKAD # CAAKVVEKAAPNEAVGVVAIVDGKYQVVEYSEISAKTAEMRNSDGRLTFSAGNICNHFFSSNFLQKIGSTYEQELKLHVAKKKIPFVDNAGKRLTPDK # PNGIKIEKFVFDVFEFAQKFVAMEVPRDEEFSALKNSDAAGKDCPSTARSDLHRLHKKYIEGAGGIVHGEVCEISPFVTYAGENLASHVEGKSFTSPV # YLRDSRDPLHGHL] # end gene g131 ### # # ----- sequence number 88 (length = 8381, name = chr2L_6478973-6487353) ----- # # annotation: # Sequence chr2L_6478973-6487353 length=8381 chr2L_6478973-6487353 database start_codon 2228 2230 . + 0 transcript_id "g951.t1.1"; gene_id "g951.t1"; chr2L_6478973-6487353 database intron 2279 3010 . + . transcript_id "g951.t1.1"; gene_id "g951.t1"; chr2L_6478973-6487353 database intron 7140 7199 . + . transcript_id "g951.t1.1"; gene_id "g951.t1"; chr2L_6478973-6487353 database intron 7381 7518 . + . transcript_id "g951.t1.1"; gene_id "g951.t1"; chr2L_6478973-6487353 database CDS 2228 2278 . + 0 transcript_id "g951.t1.1"; gene_id "g951.t1"; chr2L_6478973-6487353 database CDS 3011 7139 . + 0 transcript_id "g951.t1.1"; gene_id "g951.t1"; chr2L_6478973-6487353 database CDS 7200 7380 . + 2 transcript_id "g951.t1.1"; gene_id "g951.t1"; chr2L_6478973-6487353 database CDS 7519 8137 . + 1 transcript_id "g951.t1.1"; gene_id "g951.t1"; chr2L_6478973-6487353 database stop_codon 8135 8137 . + 0 transcript_id "g951.t1.1"; gene_id "g951.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 88 on both strands # start gene g132 chr2L_6478973-6487353 AUGUSTUS gene 1 8137 0.56 + . g132 chr2L_6478973-6487353 AUGUSTUS transcript 1 8137 0.56 + . g132.t1 chr2L_6478973-6487353 AUGUSTUS intron 1 3010 0.57 + . transcript_id "g132.t1"; gene_id "g132"; chr2L_6478973-6487353 AUGUSTUS intron 7140 7199 0.98 + . transcript_id "g132.t1"; gene_id "g132"; chr2L_6478973-6487353 AUGUSTUS intron 7381 7518 0.99 + . transcript_id "g132.t1"; gene_id "g132"; chr2L_6478973-6487353 AUGUSTUS CDS 3011 7139 0.97 + 0 transcript_id "g132.t1"; gene_id "g132"; chr2L_6478973-6487353 AUGUSTUS CDS 7200 7380 0.98 + 2 transcript_id "g132.t1"; gene_id "g132"; chr2L_6478973-6487353 AUGUSTUS CDS 7519 8137 1 + 1 transcript_id "g132.t1"; gene_id "g132"; chr2L_6478973-6487353 AUGUSTUS stop_codon 8135 8137 . + 0 transcript_id "g132.t1"; gene_id "g132"; # protein sequence = [SPAKRRRLEDPLRLLTPSGRQSFPAKLLNIPKASLGSAMVVPVAETGPARETPVIVDPLRSMHIPSGITITKHQKNVL # ATNGNMNLSLAESNNNNNTTSLNKNVTPKQINVGTGQKVAWSVSSKAPSPNAVITTVPSHQVRVTPFNPIRLAPGSKIIPASNAMPAKIQPILGMGQP # QQQAQAQQPKAIIVGFPKPNTAVAQMAQHQKPLTLQIHQKLIAGQQQHIASISQLQQVSLQQQQPLRPVSIQLQQQQNQRNGSLPGKQQKPLECPVPA # QQEKLPRGPLPTKPAEPLSGPLPTEPDEPLGGPLPTRPKPPVRSLQQPVNKNTAIGVQIQQSQEPLGGTLPTRQKPLGGQLLTQQKPPVGSIQQSVKQ # NTGIGVQIQQIPKVVVGQQPQKVYLNKLQQEQQKIFLGHLQQQQQKTFLGQLQQEQQKILGQLQQQKQQQQQQQKKILGQSQQQKVPLGQPQPQQKLP # QQLNNSLVQLQQQHQQRTSVGQLQQQQPHQSQQKNSMVHVKQQPQQQKKISVGQFQQQPQQQQKTSVAQLQQQPQQQQKISVGQLQQQSQQQQKPSVG # QLQQQSQQQQTPLVGQLQRQTQQQQKTSAGQFQQQPQQQQKISAGQLQEHSQQQQKTLAGQLQQQAQQQLNTSAGQLQQQQKPPKASLAQQAAAQKQG # AGLGQQQQFQSQPQQRTSAGLLQQQQMPQKKIVMQPQLPKTSVVLPRPQQLPKNPLLVAQQQSPKTPLVNSVMGPQFPSQQPSLPVVNQITHKSMTIQ # RLPMLQTVQKILPKQIAPQQTPPPAHIVQKQTMPNAAMQNPPFAHRPPIVRPMTVAKISPVPTNNKVCIPMKPQMASYVSPTDPTMTAARTLPFRSSQ # RKTSEAPMTSTHVQGFTASATPPQRLLATPPHCAAALNEPLLLNLPPTTSITPQLTPTTTPPPAGPSAAVQQQQLAKAAAIKLNSLPEASISPVNRSP # TASAKRIQPITVLKKSDEEWQRHLEQQQQKKHVQLQSSSMTTIVLVESPPTTPPTDKPEPERGPMTVEKSSIKPMATDKQSRAIKRPAVMISTKKSGL # VVTEIVDLDEIPDIPPEKRGKECFPPIKNAAKAAPSVNAPFTTEYAALLRLCREVDKSTHMERLVKGELTQYYYSAPESFVMSCGFRNLVTMAMARIR # SESYLVYVHLKYVLDELASRRLTKMFPTVRAIPPASQFPLPPASQFPLPPTLTTPKQPAIVKAPGQQTVMAGREQDDEVEEVTLVNVGTVSCEERRRD # ERIRHFYRTLHAITKRIKMLEEAEVDLNDEDSSYLQLERFKKRACQIYEKICDLKGESKSVRRQLKKPIHFKDSDYPHFNNSLSAFVNRMQDFPDYHD # VLQILEKCNKEKELGLAKYEMKRIAYDAFNKVGRMLQSRRKNDLYETVTHYTANGKDPASSDPELLAKLKENNKKQTKISDILEKYALEQDLNAEERQ # EARLKEKKLKQVKADEEAAKLAALAEDDDKPCTSAQAAAKAAALAALKRGPAARGNVIRKKRAANGRIFKIADDGDDSEEESDSEDDDVEEFVNNFQA # NSDVSDADSEVEAVTSPKRDALPLAEEEDVIDITRDETGKKNDEGTPNGRLKIMSVSSLNANFVHGQDLHRKPNPMPSAKPVIADQIIISDEES] # end gene g132 ### # # ----- sequence number 89 (length = 6925, name = chr2L_6557697-6564621) ----- # # annotation: # Sequence chr2L_6557697-6564621 length=6925 chr2L_6557697-6564621 database start_codon 5001 5003 . + 0 transcript_id "g966.t1.1"; gene_id "g966.t1"; chr2L_6557697-6564621 database CDS 5001 6377 . + 0 transcript_id "g966.t1.1"; gene_id "g966.t1"; chr2L_6557697-6564621 database stop_codon 6375 6377 . + 0 transcript_id "g966.t1.1"; gene_id "g966.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 89 on both strands # start gene g133 chr2L_6557697-6564621 AUGUSTUS gene 207 1349 0.89 + . g133 chr2L_6557697-6564621 AUGUSTUS transcript 207 1349 0.89 + . g133.t1 chr2L_6557697-6564621 AUGUSTUS start_codon 207 209 . + 0 transcript_id "g133.t1"; gene_id "g133"; chr2L_6557697-6564621 AUGUSTUS intron 289 721 0.97 + . transcript_id "g133.t1"; gene_id "g133"; chr2L_6557697-6564621 AUGUSTUS intron 896 1242 1 + . transcript_id "g133.t1"; gene_id "g133"; chr2L_6557697-6564621 AUGUSTUS CDS 207 288 0.96 + 0 transcript_id "g133.t1"; gene_id "g133"; chr2L_6557697-6564621 AUGUSTUS CDS 722 895 1 + 2 transcript_id "g133.t1"; gene_id "g133"; chr2L_6557697-6564621 AUGUSTUS CDS 1243 1349 0.93 + 2 transcript_id "g133.t1"; gene_id "g133"; chr2L_6557697-6564621 AUGUSTUS stop_codon 1347 1349 . + 0 transcript_id "g133.t1"; gene_id "g133"; # protein sequence = [MASICGRMALRAAARQNVAYTPVRFCKMMNDPLEHATGIEKRELLLKAAGNDNPFDMKVFKRGAGTKENPNLIPSAFD # ARIVGCICEEDQTYVQWMWLQKGNQKRCECGHWFKLVEKAAV] # end gene g133 ### # start gene g134 chr2L_6557697-6564621 AUGUSTUS gene 1835 2355 0.9 + . g134 chr2L_6557697-6564621 AUGUSTUS transcript 1835 2355 0.9 + . g134.t1 chr2L_6557697-6564621 AUGUSTUS start_codon 1835 1837 . + 0 transcript_id "g134.t1"; gene_id "g134"; chr2L_6557697-6564621 AUGUSTUS intron 2016 2071 0.96 + . transcript_id "g134.t1"; gene_id "g134"; chr2L_6557697-6564621 AUGUSTUS CDS 1835 2015 0.9 + 0 transcript_id "g134.t1"; gene_id "g134"; chr2L_6557697-6564621 AUGUSTUS CDS 2072 2355 0.96 + 2 transcript_id "g134.t1"; gene_id "g134"; chr2L_6557697-6564621 AUGUSTUS stop_codon 2353 2355 . + 0 transcript_id "g134.t1"; gene_id "g134"; # protein sequence = [MSSYISRLLKAQSASKRLISNLTQRDGKLSSLLRRLGLQWQGSAAAPQQRPISTTQVQKSALIADDQLVTGIQKREML # LAKQGCEDPWGFSKVIRRGSGRENDPTVVPSAFDARLVGCLCLDDRLPKWMWIEKDEGPKRCECGHYFILKNVPPV] # end gene g134 ### # start gene g135 chr2L_6557697-6564621 AUGUSTUS gene 2477 3871 0.91 - . g135 chr2L_6557697-6564621 AUGUSTUS transcript 2477 3871 0.91 - . g135.t1 chr2L_6557697-6564621 AUGUSTUS stop_codon 2477 2479 . - 0 transcript_id "g135.t1"; gene_id "g135"; chr2L_6557697-6564621 AUGUSTUS CDS 2477 3871 0.91 - 0 transcript_id "g135.t1"; gene_id "g135"; chr2L_6557697-6564621 AUGUSTUS start_codon 3869 3871 . - 0 transcript_id "g135.t1"; gene_id "g135"; # protein sequence = [MATEEDIPRIQLGDYIVIQRQKYTKLQKFGSLDTTATLGKETLELKSLLDQPYGSTFKMCVKETKPGKRGAQRQHTLE # LCSETELRSTREVLGISSSGADNRDIRDDGEAQTLKPEDIAQLREECNDSSKIIEKLVENSKTFHNRTEYSQEKYLLKKEKKYFEFVQIRQPTIRLML # DIFYRQDSEKVMGIRVDTLSQIISYSGVCGFGSYLLYESGTNGLLPAAMLNSIGAGTEGTLVHMHPGNVPQKQALSALKLPLEQQQRCVSVNLYSVLR # EFYQGGDAKATDIPVVEPSENEPQETQLETPTEEQPEAIEPTTKKPKLDESNSGREGIGHNSKLIKTSTNTISVVIGAKGPPRWHLENKRATALMHAE # FDSLVVAAKEHPSNILQALLPLVKPSRPVVVFSTCKELLQETFMELKTTGKVTGLHLTSNWLRTYQILPNRTHPEVNMSGNSGYLLTGYTLR] # end gene g135 ### # start gene g136 chr2L_6557697-6564621 AUGUSTUS gene 5001 6377 1 + . g136 chr2L_6557697-6564621 AUGUSTUS transcript 5001 6377 1 + . g136.t1 chr2L_6557697-6564621 AUGUSTUS start_codon 5001 5003 . + 0 transcript_id "g136.t1"; gene_id "g136"; chr2L_6557697-6564621 AUGUSTUS CDS 5001 6377 1 + 0 transcript_id "g136.t1"; gene_id "g136"; chr2L_6557697-6564621 AUGUSTUS stop_codon 6375 6377 . + 0 transcript_id "g136.t1"; gene_id "g136"; # protein sequence = [MAEAKSEKSPFIGKQQAPVTLNPSWESKLPPHDSNGKGSTSVLAKLGLPAPKDKFLIVFFIFLLHGVGTLMPWNMFIT # AKSYFEDFKFGPNNTVATEVSYRTHFMQNMGFASQIPNLVFNWLNIFVNFGGDLTTRIVYSIIFEMVILLVTIILAMLDSSQWPGVFFWTTMVCIVLL # NVCNGIYQNTIYGIVASLPIKYTGAVVLGSNISGCFTTAMALICGEIFSSKRTSAIYYFVTAILVLLLCFDTYFALPLNKFFRHYETISRSSEKKSDS # KAQLNVPYWQIFKKAAPQLFNIFLTFFVTLSVFPAIQSNVHRSDPNFVVGPDYFTLVTCFATFNVFAMLGSLTTSWVQWPGPRFLWVPVVLRLAFIPL # FVMCNYVPPDSVRSLAVFIENDWVYWGIGIAMAYSSGYLSSLGMMYAPQTVHTKYQTTAGMYAAAMLITGIFSGVLFSYLGPFFVV] # end gene g136 ### # # ----- sequence number 90 (length = 8961, name = chr2L_6788527-6797487) ----- # # annotation: # Sequence chr2L_6788527-6797487 length=8961 chr2L_6788527-6797487 database stop_codon 2113 2115 . - 0 transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database intron 2217 2272 . - . transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database intron 2442 2504 . - . transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database intron 2798 2991 . - . transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database intron 3112 3174 . - . transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database intron 3316 4701 . - . transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database CDS 2113 2216 . - 2 transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database CDS 2273 2441 . - 0 transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database CDS 2505 2797 . - 2 transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database CDS 2992 3111 . - 2 transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database CDS 3175 3315 . - 2 transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database CDS 4702 4843 . - 0 transcript_id "g1010.t1.1"; gene_id "g1010.t1"; chr2L_6788527-6797487 database start_codon 4841 4843 . - 0 transcript_id "g1010.t1.1"; gene_id "g1010.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 90 on both strands # start gene g137 chr2L_6788527-6797487 AUGUSTUS gene 2113 4843 0.37 - . g137 chr2L_6788527-6797487 AUGUSTUS transcript 2113 4843 0.37 - . g137.t1 chr2L_6788527-6797487 AUGUSTUS stop_codon 2113 2115 . - 0 transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS intron 2217 2272 1 - . transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS intron 2442 2504 0.92 - . transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS intron 2798 2991 1 - . transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS intron 3112 3174 0.4 - . transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS intron 3316 4701 0.98 - . transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS CDS 2113 2216 1 - 2 transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS CDS 2273 2441 0.99 - 0 transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS CDS 2505 2797 0.93 - 2 transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS CDS 2992 3111 0.4 - 2 transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS CDS 3175 3315 0.98 - 2 transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS CDS 4702 4843 0.98 - 0 transcript_id "g137.t1"; gene_id "g137"; chr2L_6788527-6797487 AUGUSTUS start_codon 4841 4843 . - 0 transcript_id "g137.t1"; gene_id "g137"; # protein sequence = [MSKPVPMSPSFVDEDLHNLRKPKPFKLGQFLYNTEDGTVMGRDRSSWAKIGIFYVAFYGVLAALVAICMWAFFQTLDP # RIPKWTLDRSLIGTNPGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNIYNCDYNQPPPKGQVCDVDIKTWSPCTK # ENNYSYHKSAPCIFLKLNKIYGWIPEYYNRSNDLPANMPASLKTYIAEVEKTQPEKLNTIWVSCEGENPADQENIGAVNYLPIRGFPGYFYPYQNSEG # YLSPLVAVHFQRPKRGIIINVECRAWARNIIHDRKERIGSVHYELLID] # end gene g137 ### # start gene g138 chr2L_6788527-6797487 AUGUSTUS gene 7377 8961 0.39 - . g138 chr2L_6788527-6797487 AUGUSTUS transcript 7377 8961 0.39 - . g138.t1 chr2L_6788527-6797487 AUGUSTUS stop_codon 7377 7379 . - 0 transcript_id "g138.t1"; gene_id "g138"; chr2L_6788527-6797487 AUGUSTUS intron 7547 7810 0.76 - . transcript_id "g138.t1"; gene_id "g138"; chr2L_6788527-6797487 AUGUSTUS intron 8191 8961 0.54 - . transcript_id "g138.t1"; gene_id "g138"; chr2L_6788527-6797487 AUGUSTUS CDS 7377 7546 0.78 - 2 transcript_id "g138.t1"; gene_id "g138"; chr2L_6788527-6797487 AUGUSTUS CDS 7811 8190 0.75 - 1 transcript_id "g138.t1"; gene_id "g138"; # protein sequence = [VKPSAFPAIDQSQPSLTRDLHRTAQESSWIHDPPHISIPLHIPISNPVIRKPLPTRSRSRNRLAVELRKRQPKKKPGI # MPTITEDCIDGFQQYYSRPPERPKKKSLKQMVYDSEDNSYFGRSMDSWGILASLAPRRDQICVPVPMPGPLVPQYRSIMPLCNQAAVNPPAFSRTTAD # FGRRSK] # end gene g138 ### # # ----- sequence number 91 (length = 5285, name = chr2L_6872048-6877332) ----- # # annotation: # Sequence chr2L_6872048-6877332 length=5285 chr2L_6872048-6877332 database stop_codon 5001 5003 . - 0 transcript_id "g1021.t1.1"; gene_id "g1021.t1"; chr2L_6872048-6877332 database CDS 5001 5210 . - 0 transcript_id "g1021.t1.1"; gene_id "g1021.t1"; chr2L_6872048-6877332 database start_codon 5208 5210 . - 0 transcript_id "g1021.t1.1"; gene_id "g1021.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 91 on both strands # (none) # # ----- sequence number 92 (length = 3456, name = chr2L_6948895-6952350) ----- # # annotation: # Sequence chr2L_6948895-6952350 length=3456 chr2L_6948895-6952350 database stop_codon 481 483 . - 0 transcript_id "g1041.t1.1"; gene_id "g1041.t1"; chr2L_6948895-6952350 database intron 639 696 . - . transcript_id "g1041.t1.1"; gene_id "g1041.t1"; chr2L_6948895-6952350 database CDS 481 638 . - 2 transcript_id "g1041.t1.1"; gene_id "g1041.t1"; chr2L_6948895-6952350 database CDS 697 1222 . - 0 transcript_id "g1041.t1.1"; gene_id "g1041.t1"; chr2L_6948895-6952350 database start_codon 1220 1222 . - 0 transcript_id "g1041.t1.1"; gene_id "g1041.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 92 on both strands # start gene g139 chr2L_6948895-6952350 AUGUSTUS gene 481 1222 1 - . g139 chr2L_6948895-6952350 AUGUSTUS transcript 481 1222 1 - . g139.t1 chr2L_6948895-6952350 AUGUSTUS stop_codon 481 483 . - 0 transcript_id "g139.t1"; gene_id "g139"; chr2L_6948895-6952350 AUGUSTUS intron 639 696 1 - . transcript_id "g139.t1"; gene_id "g139"; chr2L_6948895-6952350 AUGUSTUS CDS 481 638 1 - 2 transcript_id "g139.t1"; gene_id "g139"; chr2L_6948895-6952350 AUGUSTUS CDS 697 1222 1 - 0 transcript_id "g139.t1"; gene_id "g139"; chr2L_6948895-6952350 AUGUSTUS start_codon 1220 1222 . - 0 transcript_id "g139.t1"; gene_id "g139"; # protein sequence = [MTDFGGDSGGRLKGVTIVKPIVYGNIARSFGKKREEDGHTHQWKVYLKPYFNEDMSIYVKKVHFKLHESYANPNRIVV # KPPYEITETGWGEFEVIIKIYFNDQSERPVTCYHILKLFQSPVVDGELSSSTTMDTKKGLVSESYEEIVFQEPTQILQHYLLLSEQSANGLLTHDTDF # EEKKTKTLDNIVNVKQKVKGEIVTLKDKLKLARETISKFKAELAKVQKQPA] # end gene g139 ### # start gene g140 chr2L_6948895-6952350 AUGUSTUS gene 1645 3170 0.82 + . g140 chr2L_6948895-6952350 AUGUSTUS transcript 1645 3170 0.82 + . g140.t1 chr2L_6948895-6952350 AUGUSTUS start_codon 1645 1647 . + 0 transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS intron 1716 1778 1 + . transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS intron 2095 2150 1 + . transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS intron 2325 2379 1 + . transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS intron 2680 2732 1 + . transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS CDS 1645 1715 0.82 + 0 transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS CDS 1779 2094 1 + 1 transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS CDS 2151 2324 1 + 0 transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS CDS 2380 2679 1 + 0 transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS CDS 2733 3170 0.99 + 0 transcript_id "g140.t1"; gene_id "g140"; chr2L_6948895-6952350 AUGUSTUS stop_codon 3168 3170 . + 0 transcript_id "g140.t1"; gene_id "g140"; # protein sequence = [MMARRGGKRIRMDDPPPDYEELHSDALNESTSDADSPTKRMTRLRARGGVRDKPPIIDDDEDDFFAPIARKRKTPATR # KGPTERKERVERPRKEPVDKGHHERIDSEREITTDENSLYYIVRHSKNPIASIVDQWIEQYKANRETALVALMQFFINASGCKGKISEDIQYPVDHTS # IIRRMTEEFDEESGEYPLIMSGTQWRKFKNNFCDFVQTLVKQCQYSIIYDQFLMDNVISLLTGLSDSQVRAFRHTATLAAMKLMTALVDVALLVSNNF # DNAAKQFEAERVKSRDRRASDRLDSLMTKRSELEENMDEIKSMLTYMFKSVFVHRYRDSLPDIRAICMAEIGIWMENYPQNFLDDSYLKYIGWTLHDK # IGEVRLRCLQSLLPLYEKDELKGKLELFTSKFKDRIVAMTLDKEFEVSVHAVKLVISILK] # end gene g140 ### # # ----- sequence number 93 (length = 4635, name = chr2L_6952351-6956985) ----- # # annotation: # Sequence chr2L_6952351-6956985 length=4635 chr2L_6952351-6956985 database stop_codon 2235 2237 . - 0 transcript_id "g1043.t1.1"; gene_id "g1043.t1"; chr2L_6952351-6956985 database intron 2853 2906 . - . transcript_id "g1043.t1.1"; gene_id "g1043.t1"; chr2L_6952351-6956985 database intron 3870 4267 . - . transcript_id "g1043.t1.1"; gene_id "g1043.t1"; chr2L_6952351-6956985 database CDS 2235 2852 . - 0 transcript_id "g1043.t1.1"; gene_id "g1043.t1"; chr2L_6952351-6956985 database CDS 2907 3869 . - 0 transcript_id "g1043.t1.1"; gene_id "g1043.t1"; chr2L_6952351-6956985 database CDS 4268 4522 . - 0 transcript_id "g1043.t1.1"; gene_id "g1043.t1"; chr2L_6952351-6956985 database start_codon 4520 4522 . - 0 transcript_id "g1043.t1.1"; gene_id "g1043.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 93 on both strands # start gene g141 chr2L_6952351-6956985 AUGUSTUS gene 1 2104 0.98 + . g141 chr2L_6952351-6956985 AUGUSTUS transcript 1 2104 0.98 + . g141.t1 chr2L_6952351-6956985 AUGUSTUS intron 606 664 1 + . transcript_id "g141.t1"; gene_id "g141"; chr2L_6952351-6956985 AUGUSTUS intron 1024 1083 1 + . transcript_id "g141.t1"; gene_id "g141"; chr2L_6952351-6956985 AUGUSTUS intron 1375 1436 1 + . transcript_id "g141.t1"; gene_id "g141"; chr2L_6952351-6956985 AUGUSTUS intron 1978 2042 1 + . transcript_id "g141.t1"; gene_id "g141"; chr2L_6952351-6956985 AUGUSTUS CDS 1 605 0.98 + 1 transcript_id "g141.t1"; gene_id "g141"; chr2L_6952351-6956985 AUGUSTUS CDS 665 1023 1 + 2 transcript_id "g141.t1"; gene_id "g141"; chr2L_6952351-6956985 AUGUSTUS CDS 1084 1374 1 + 0 transcript_id "g141.t1"; gene_id "g141"; chr2L_6952351-6956985 AUGUSTUS CDS 1437 1977 1 + 0 transcript_id "g141.t1"; gene_id "g141"; chr2L_6952351-6956985 AUGUSTUS CDS 2043 2104 1 + 2 transcript_id "g141.t1"; gene_id "g141"; chr2L_6952351-6956985 AUGUSTUS stop_codon 2102 2104 . + 0 transcript_id "g141.t1"; gene_id "g141"; # protein sequence = [GAYLVDSFIDSNDMVRDWECMTDLLLEEPGPNEEVLDNKQESTLIEIMVSSVKQSATGEVPVGRASNRKCTLSAKELK # AIQDEKAKLTEHFIVTLPSLLEKYQADSEKLANLLAVPQYFDLNLYTTNRQEGNLQALLDRINQVMSMHTGREVLETCAKTLECLCAEGSATYTRCNI # ARSNIIESAVNKYKDAIEEWRNLIQGEETPNEDDIYNITITLKVLSILYSSHNLNPWELFKSLFQDVEEAQSKENIDRCLPNEALVYCIEACYFSISW # GLQYVENECESVNVTEVVAELRNNLDTFMGACFELTRDGPTVQIQEAAYQSICDLLIIFSDKLARSEIEHIRGLEYKSRMDEHLILDNFVQHYVFSLK # QDVAQDETRIEELHKKRNFLACYCKLVVYNIIPTMRAASIFKYYVKCYNDYGDIIKATLGKAREINKVNFAMTLLLSLITVFKSLQEQSEDGIVSKSS # QEFVDLKELAKRFALTFGFDAIKNRESVAAIHRGGIYFAANKEPDDPVRAPTRLLFLEVLNEFNYKLLKQDKKVIMSFLDKIIPPAMPSSRAEEWQPL # ILYRNSLLHGETDQAPVASKRAYTRKRRDHDEEEEEEEDEEEHNDPDYRG] # end gene g141 ### # start gene g142 chr2L_6952351-6956985 AUGUSTUS gene 2235 4522 0.85 - . g142 chr2L_6952351-6956985 AUGUSTUS transcript 2235 4522 0.85 - . g142.t1 chr2L_6952351-6956985 AUGUSTUS stop_codon 2235 2237 . - 0 transcript_id "g142.t1"; gene_id "g142"; chr2L_6952351-6956985 AUGUSTUS intron 2853 2906 1 - . transcript_id "g142.t1"; gene_id "g142"; chr2L_6952351-6956985 AUGUSTUS intron 3870 4267 1 - . transcript_id "g142.t1"; gene_id "g142"; chr2L_6952351-6956985 AUGUSTUS CDS 2235 2852 0.88 - 0 transcript_id "g142.t1"; gene_id "g142"; chr2L_6952351-6956985 AUGUSTUS CDS 2907 3869 1 - 0 transcript_id "g142.t1"; gene_id "g142"; chr2L_6952351-6956985 AUGUSTUS CDS 4268 4522 0.97 - 0 transcript_id "g142.t1"; gene_id "g142"; chr2L_6952351-6956985 AUGUSTUS start_codon 4520 4522 . - 0 transcript_id "g142.t1"; gene_id "g142"; # protein sequence = [MSKKKSNVWQYFYKTSGTVATCLLCNRNYSRRGRGTTCLRNHLKSKHPPEFLSLSGDIKYLDLVKSEISIGSPQHPTA # QLELNLHETDSDPLDTEDISYSKRCDEKLALMLLNHSFEFIEGPGFVNFIRTLQPRYTIQPRSYYEKILCEDIQRKMHQHLKQQVDLLDAISLSTSLW # RGDKGEGLLSLSCSGISRDFQTHRLMLKCEALNYESTSKLACCIRDLVPSLAIEVPKEKIHCVIRDEMTALPGSLPDCSVHRLQMCVRFALQSNELLQ # NLSSKCKQIVDHFASSKMANDHLKFIQEIRLTRDPCTLTPYDPCQWNSAFQMMSSVFRMKDALSLYCEEYSLVQIYPDEWIEIDLCSKVMQPCEETIK # IWSNPSTTTSSVIPLVAALRDSLRTDVHNFVSSVTICSFARKLLEELEMKFAHITSDINFLMATYLDPRYKQAFFTEREEQLVANEVLLQLAGVPEDC # NGQPPLKIIKVSSTSSQKNESKIDSILDSILTTGTTNTQQPNTSMGSQSQIKNLLYLYNSEPRIDRNMDPLIWWRSNIKYISLYGIVRKFLSAPAASV # VSEGLFRKSTHLYFDMQAGLSPESASKMLLMKANFSFSNSEIN] # end gene g142 ### # # ----- sequence number 94 (length = 5692, name = chr2L_7424581-7430272) ----- # # annotation: # Sequence chr2L_7424581-7430272 length=5692 chr2L_7424581-7430272 database start_codon 2621 2623 . + 0 transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database intron 2782 3466 . + . transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database intron 3637 3700 . + . transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database intron 4100 4297 . + . transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database intron 4525 4586 . + . transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database intron 4936 5001 . + . transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database intron 5105 5162 . + . transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database CDS 2621 2781 . + 0 transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database CDS 3467 3636 . + 1 transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database CDS 3701 4099 . + 2 transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database CDS 4298 4524 . + 2 transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database CDS 4587 4935 . + 0 transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database CDS 5002 5104 . + 2 transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database CDS 5163 5292 . + 1 transcript_id "g1102.t1.1"; gene_id "g1102.t1"; chr2L_7424581-7430272 database stop_codon 5290 5292 . + 0 transcript_id "g1102.t1.1"; gene_id "g1102.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 94 on both strands # start gene g143 chr2L_7424581-7430272 AUGUSTUS gene 2621 5292 0.41 + . g143 chr2L_7424581-7430272 AUGUSTUS transcript 2621 5292 0.41 + . g143.t1 chr2L_7424581-7430272 AUGUSTUS start_codon 2621 2623 . + 0 transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS intron 2782 3466 0.91 + . transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS intron 3637 3700 1 + . transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS intron 4100 4345 0.47 + . transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS intron 4525 4586 1 + . transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS intron 4936 5001 1 + . transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS intron 5105 5162 1 + . transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS CDS 2621 2781 0.93 + 0 transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS CDS 3467 3636 0.98 + 1 transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS CDS 3701 4099 0.96 + 2 transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS CDS 4346 4524 0.5 + 2 transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS CDS 4587 4935 1 + 0 transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS CDS 5002 5104 1 + 2 transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS CDS 5163 5292 0.99 + 1 transcript_id "g143.t1"; gene_id "g143"; chr2L_7424581-7430272 AUGUSTUS stop_codon 5290 5292 . + 0 transcript_id "g143.t1"; gene_id "g143"; # protein sequence = [MLRSLATTRNELGALRSVLLRSNNATYVRRSTGNVVVRALSSQLINSRKLQSIRSKLNTSQSPVTWSYNFARAYANLP # EHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGFLAKILIQGGTKDVPVGQLLCIIVPDQGSVAAFANFKDDGAAAA # PAAPAAAPAPAPAAAAAPPPPPPPAAAPAAAAPPPAPAAAPAAAGTGRVYASPMAKRLAEAQQLRLQGQKAAAKPAAAAPAKAPRAAGARYEDIPVTN # MRAVIAKRLLESKTQLPHYYVTVQCQVDKLLKFRAKVNKKYEKQGARVSVNDFIIKAVAIASLKVPEANSAWMDTVIRKYDDVDVSVAVSTDKGLITP # IVFNADRKGVLEISKDVKALAAKARDNKLQPHEFQGGTISVSNLGMFGVNQFAAVINPPQSCILAIGTTTKQLVADPDSLKGFKEVNMLTVTLSADHR # VVDGAVAARWLQHFRDYMEDPSNMVL] # end gene g143 ### # # ----- sequence number 95 (length = 36219, name = chr2L_7498178-7534396) ----- # # annotation: # Sequence chr2L_7498178-7534396 length=36219 chr2L_7498178-7534396 database stop_codon 848 850 . - 0 transcript_id "g1115.t1.1"; gene_id "g1115.t1"; chr2L_7498178-7534396 database intron 1004 1088 . - . transcript_id "g1115.t1.1"; gene_id "g1115.t1"; chr2L_7498178-7534396 database intron 1578 1635 . - . transcript_id "g1115.t1.1"; gene_id "g1115.t1"; chr2L_7498178-7534396 database intron 3349 31024 . - . transcript_id "g1115.t1.1"; gene_id "g1115.t1"; chr2L_7498178-7534396 database CDS 848 1003 . - 0 transcript_id "g1115.t1.1"; gene_id "g1115.t1"; chr2L_7498178-7534396 database CDS 1089 1577 . - 0 transcript_id "g1115.t1.1"; gene_id "g1115.t1"; chr2L_7498178-7534396 database CDS 1636 3348 . - 0 transcript_id "g1115.t1.1"; gene_id "g1115.t1"; chr2L_7498178-7534396 database CDS 31025 31219 . - 0 transcript_id "g1115.t1.1"; gene_id "g1115.t1"; chr2L_7498178-7534396 database start_codon 31217 31219 . - 0 transcript_id "g1115.t1.1"; gene_id "g1115.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 95 on both strands # start gene g144 chr2L_7498178-7534396 AUGUSTUS gene 848 4333 0.91 - . g144 chr2L_7498178-7534396 AUGUSTUS transcript 848 4333 0.91 - . g144.t1 chr2L_7498178-7534396 AUGUSTUS stop_codon 848 850 . - 0 transcript_id "g144.t1"; gene_id "g144"; chr2L_7498178-7534396 AUGUSTUS intron 1004 1088 1 - . transcript_id "g144.t1"; gene_id "g144"; chr2L_7498178-7534396 AUGUSTUS intron 1578 1635 1 - . transcript_id "g144.t1"; gene_id "g144"; chr2L_7498178-7534396 AUGUSTUS intron 3349 4300 0.91 - . transcript_id "g144.t1"; gene_id "g144"; chr2L_7498178-7534396 AUGUSTUS CDS 848 1003 1 - 0 transcript_id "g144.t1"; gene_id "g144"; chr2L_7498178-7534396 AUGUSTUS CDS 1089 1577 1 - 0 transcript_id "g144.t1"; gene_id "g144"; chr2L_7498178-7534396 AUGUSTUS CDS 1636 3348 1 - 0 transcript_id "g144.t1"; gene_id "g144"; chr2L_7498178-7534396 AUGUSTUS CDS 4301 4333 0.91 - 0 transcript_id "g144.t1"; gene_id "g144"; chr2L_7498178-7534396 AUGUSTUS start_codon 4331 4333 . - 0 transcript_id "g144.t1"; gene_id "g144"; # protein sequence = [MNPSPLPLTPWNHHRGSNASEERVPQPHSPHDSHAHPHNGGLQHSGSRATLRHSMNHSSSSTVSGSACSSTPASPQLS # GVVSASGCQLLSNGHHYQSQSSVSSNSSIVSAIPASQRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTAKCY # RRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCLLPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHV # LVSHFKFGVLYQRYGQTTEEELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFHVSTLLPHTEGDPQQLQRKR # HIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNTPHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAK # LEQRTRTSLLQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDTVKKALIMRVRSQSVDTGNGHGPGQTDKFSVNTKLGTLNS # KKETHPEMQTPNLNTCSRTASKSSSKSKSSNESTSSSPDITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDL # DPMMAHLDGGATYIDSDTGLESMSSAEATTKACSLCLDGVQSTIMGSSPSNETIVKIENLRQEVTRLKCDKLDLLRQNVTCQRDIKRLRERELSLQGD # LSAAGREILRLRDLLKEYMPDTASAPLSISPI] # end gene g144 ### # start gene g145 chr2L_7498178-7534396 AUGUSTUS gene 31007 31219 0.86 - . g145 chr2L_7498178-7534396 AUGUSTUS transcript 31007 31219 0.86 - . g145.t1 chr2L_7498178-7534396 AUGUSTUS stop_codon 31007 31009 . - 0 transcript_id "g145.t1"; gene_id "g145"; chr2L_7498178-7534396 AUGUSTUS CDS 31007 31219 0.86 - 0 transcript_id "g145.t1"; gene_id "g145"; chr2L_7498178-7534396 AUGUSTUS start_codon 31217 31219 . - 0 transcript_id "g145.t1"; gene_id "g145"; # protein sequence = [MGVLRWRDSPGSRISGSIGNSSGNSNNNHHHSSNSNSSSGNNNAHQQQHNNNHINNNMNNNNNREVCVGI] # end gene g145 ### # # ----- sequence number 96 (length = 13133, name = chr2L_7693289-7706421) ----- # # annotation: # Sequence chr2L_7693289-7706421 length=13133 chr2L_7693289-7706421 database stop_codon 620 622 . - 0 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database intron 1709 1784 . - . transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database intron 2684 2739 . - . transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database intron 2919 3305 . - . transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database intron 3520 5436 . - . transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database intron 5705 5766 . - . transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database intron 6029 6090 . - . transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database intron 7381 8071 . - . transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database CDS 620 1708 . - 0 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database CDS 1785 2683 . - 2 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database CDS 2740 2918 . - 1 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database CDS 3306 3519 . - 2 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database CDS 5437 5704 . - 0 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database CDS 5767 6028 . - 1 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database CDS 6091 7380 . - 1 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database CDS 8072 8133 . - 0 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; chr2L_7693289-7706421 database start_codon 8131 8133 . - 0 transcript_id "g1127.t1.1"; gene_id "g1127.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 96 on both strands # start gene g146 chr2L_7693289-7706421 AUGUSTUS gene 620 8133 0.48 - . g146 chr2L_7693289-7706421 AUGUSTUS transcript 620 8133 0.48 - . g146.t1 chr2L_7693289-7706421 AUGUSTUS stop_codon 620 622 . - 0 transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS intron 1709 1784 1 - . transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS intron 2684 2739 0.97 - . transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS intron 2919 5085 0.97 - . transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS intron 5180 5436 0.84 - . transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS intron 5705 5766 1 - . transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS intron 6029 6090 0.57 - . transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS intron 7381 8071 0.98 - . transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS CDS 620 1708 1 - 0 transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS CDS 1785 2683 1 - 2 transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS CDS 2740 2918 0.97 - 1 transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS CDS 5086 5179 0.84 - 2 transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS CDS 5437 5704 1 - 0 transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS CDS 5767 6028 0.57 - 1 transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS CDS 6091 7380 1 - 1 transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS CDS 8072 8133 0.98 - 0 transcript_id "g146.t1"; gene_id "g146"; chr2L_7693289-7706421 AUGUSTUS start_codon 8131 8133 . - 0 transcript_id "g146.t1"; gene_id "g146"; # protein sequence = [MFRIFLTGIILQYALLVNATGIYSVVGPGTLRSNSKYNVVVSVHKADGPSQIKVSLNGPSYNETKQIELPPMSTQNVE # FEVPKLATGNYNLSAEGVSGVVFKNSTKLNYADKKPSVFVQTDKATYKPADLVQFRILFLDENTRPAKIEKPISVIIIDGAQNRIKQLSDVKLTKGVF # SGELQLSEQPVLGTWKISVSVDGDNRETKSFEVDKYVLPKFEVIVDTPKAVVIADKVIKATIRAKYTYGKPVKGKATVSMERSYGYFGDLNANGNKQE # KTIDVDGKGHVEFDIIHWAQRGQYLPPIKLFAVVTEELTGNKQNATATVVLHQQRYSIEPYERPEHFEANKSFIYQVVVKNVDGSPVTNSAKNVKIGF # DKSYSYFHEPSPKTRINFEAPVNENGIATFNVRLPDSDSRYYRIFASFDGSENTIGSISKFEPTPMSREPLKIQVNTKKPRLGEQVSFDVVSIEDLPY # FVYTIVARGNVILSDYVDVPDGQKTYTVKFTPTFSMVPKATIYVYYVVNNDLQFEEKTIDFEKEFSNSIDVSAPTNAKPSEEVKLRIKTDADSFVGLL # GVDQSVLLLKSGNDLSQDDIFNSLNIYQTSTPWMNGYGRYPGQTSGLVTLTNANYPYNTANFPPDTGNTVQPVEIRKNFADVWIWQSIGRSVGEEEFT # LTKKIPDTITSWVVTGFSLNPTSGIALTKNPSKIRVFQPFFVSTNLPYSVKRGEVIAIPVVIFNYLDKTLDADVVMDNSDQEYEFTEATNEVLEKAID # EVRRVKRVTIPANSGKSVSFMIRPKNVGFTTLKITATSALAGDAIHQKLKVEPEGVTLFENRAVFINLKDQPEMSQSLDADIPNEVVPQSEFIEFSVV # GDLLGPTLQNLDNLVRMPYGCGEQNMVNFVPNILVLKYLEVTGRKLPSVESKARKFLEIGYQRELTYKHDDGSYSAFGKSDASGSTWLTAYVMRSFHQ # AGTYTDIDPKVITAGLDFLVSKQKESGEFPEVGKLFDNANQNPLALTSFVLLAFFENHELIPKYQSAIKKAVRYVAEEADKTDDQYSLAIAAVALQLA # KHPQSEKVIAKLESVARKENDRMWWSKATESTGEDGRVFHWKPRSNDVEITSYVLLALLEKDPAEKALPIIKWLISQRNSNGGFSSTQDTVIGLQALT # KFAYKTGSGSGTMDIEFSSAGESKNTIKVNPENSLVLQTHDLPKSTRKVDFTAKGTGSAMVQLSYRYNLAEKEKKPSFKVTPTVKDTPNQLLIVDVCA # EYVPLEDADKDKDSNMAVMEIALPSGFVGDSTSLGKIQAVDRVKRVETKNSDSTVVVYFDSLTPGDVRCLPLEASKAHAVAKQKPASVSLYDYYDTER # KATEYYQVKSSLCDICEGADCGEGCKKD] # end gene g146 ### # start gene g147 chr2L_7693289-7706421 AUGUSTUS gene 12185 12835 0.23 + . g147 chr2L_7693289-7706421 AUGUSTUS transcript 12185 12835 0.23 + . g147.t1 chr2L_7693289-7706421 AUGUSTUS start_codon 12185 12187 . + 0 transcript_id "g147.t1"; gene_id "g147"; chr2L_7693289-7706421 AUGUSTUS intron 12211 12375 0.23 + . transcript_id "g147.t1"; gene_id "g147"; chr2L_7693289-7706421 AUGUSTUS CDS 12185 12210 0.25 + 0 transcript_id "g147.t1"; gene_id "g147"; chr2L_7693289-7706421 AUGUSTUS CDS 12376 12835 0.28 + 1 transcript_id "g147.t1"; gene_id "g147"; chr2L_7693289-7706421 AUGUSTUS stop_codon 12833 12835 . + 0 transcript_id "g147.t1"; gene_id "g147"; # protein sequence = [MHLNLPHLRYRLTAEGLGGVQFTNETQLHFESKQHTVLVQTDKSIYKPGDLVHYRVLILDANLKPARGYGRVHVDIKD # SGDNIIRSYKDIRLTNSIYSNELRLSDSPRFGTWSIVVDVSDQEHTQTFEILDHILPKFVVDIDTPKHAIYKDGKIAATVRAQ] # end gene g147 ### # # ----- sequence number 97 (length = 7001, name = chr2L_7775118-7782118) ----- # # annotation: # Sequence chr2L_7775118-7782118 length=7001 chr2L_7775118-7782118 database start_codon 5001 5003 . + 0 transcript_id "g1145.t1.1"; gene_id "g1145.t1"; chr2L_7775118-7782118 database intron 5575 5643 . + . transcript_id "g1145.t1.1"; gene_id "g1145.t1"; chr2L_7775118-7782118 database CDS 5001 5574 . + 0 transcript_id "g1145.t1.1"; gene_id "g1145.t1"; chr2L_7775118-7782118 database CDS 5644 6128 . + 2 transcript_id "g1145.t1.1"; gene_id "g1145.t1"; chr2L_7775118-7782118 database stop_codon 6126 6128 . + 0 transcript_id "g1145.t1.1"; gene_id "g1145.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 97 on both strands # start gene g148 chr2L_7775118-7782118 AUGUSTUS gene 1 2868 0.98 - . g148 chr2L_7775118-7782118 AUGUSTUS transcript 1 2868 0.98 - . g148.t1 chr2L_7775118-7782118 AUGUSTUS intron 1 867 0.98 - . transcript_id "g148.t1"; gene_id "g148"; chr2L_7775118-7782118 AUGUSTUS CDS 868 2868 0.98 - 0 transcript_id "g148.t1"; gene_id "g148"; chr2L_7775118-7782118 AUGUSTUS start_codon 2866 2868 . - 0 transcript_id "g148.t1"; gene_id "g148"; # protein sequence = [MELPIVLLLVLSVIPFEAQGAVHDELPQCGLHGVYRQRQSLVESPNYPDNYPVNTCWDYVVRSPYRCPTKFHIQFLDF # KLELSENCSRDYLAIGLNNDGDDMEVLCGQVLGIKKYHTPDGVLRLRFLSDDSPWTTNGGFRLLITRLACEREDLVARGLDDDEEDVDGDTVQVSAKS # PPKKLLTQHHHHHLPQQSHQPQLEPAFNYTQPNRLGFNLGLQPGLGYPGGLYPPPAGLPPQYTPPCAPQQQQLLQQQQEQHRFLQQQQLQLQILQQQR # LQQQVLQQQQLQQQVQVQHPQQLQLSQQQQQLQQELPLISDQYQTTSFQPHAVTLKDYDAQTLQQFGGQLDLCCASSFNQNHFYLSSPGFPRTVLNYL # LPNQQRDCVFYIEKSSPNVCRLRIQFKFFDFGQNSGGSIGGSFGDGFGGGVSGGLGGGHSGGFGGQHNCNGDFLELDGQRYCGCRSGYVHKSHWDQGR # KALRMRIGQSSSTTSNGFLLEIFQDQDSDGCRQDAGQGFGLGLQPQQPQRGLGLWPQGLQPQLGLQPQLGLQPQLGLPPQTAQMWPLQPGYPGYISGY # PLPFSATPYRTARRISYARGIDAQQPSRVVETNSTRKEFYYFDGDEAFARSAVDDEDEDKAHLGVTTQPQSSSQSIVKPESPLVTKAFEQSSCSFDYM # E] # end gene g148 ### # start gene g149 chr2L_7775118-7782118 AUGUSTUS gene 5001 6128 0.99 + . g149 chr2L_7775118-7782118 AUGUSTUS transcript 5001 6128 0.99 + . g149.t1 chr2L_7775118-7782118 AUGUSTUS start_codon 5001 5003 . + 0 transcript_id "g149.t1"; gene_id "g149"; chr2L_7775118-7782118 AUGUSTUS intron 5575 5643 1 + . transcript_id "g149.t1"; gene_id "g149"; chr2L_7775118-7782118 AUGUSTUS CDS 5001 5574 0.99 + 0 transcript_id "g149.t1"; gene_id "g149"; chr2L_7775118-7782118 AUGUSTUS CDS 5644 6128 1 + 2 transcript_id "g149.t1"; gene_id "g149"; chr2L_7775118-7782118 AUGUSTUS stop_codon 6126 6128 . + 0 transcript_id "g149.t1"; gene_id "g149"; # protein sequence = [MFATPLRQPAAANHQTPKNSAGMDEHGKPYQYEITDHGYGKDAVKVLHVSRNGPVHAIQEFEVGTHLKLYSKKDYYQG # NNSDIVATDSQKNTVYLLAKKHGIESPEKFALLLARHFINKYSHVEEAHVHVEAYPWQRVCQEETRTNVNGKCENGVQGNCDFSSIDNRSLHNHAFIF # TPTALHYCDVVIRRTDPKQTVITGIKGLRVLKTTQSSFVNFVNDEFRSLPDQYDRIFSTVVDCSWEYSDTENLDFLRAWQTVKNIIIRNFAGDPQVGV # SSPSVQHTLYLSERQVLDVLPQVSVISMTMPNKHYFNFDTKPFQKIAPGDNNEVFIPVDKPHGTIYAQLARKNINSHL] # end gene g149 ### # start gene g150 chr2L_7775118-7782118 AUGUSTUS gene 6518 6751 0.91 + . g150 chr2L_7775118-7782118 AUGUSTUS transcript 6518 6751 0.91 + . g150.t1 chr2L_7775118-7782118 AUGUSTUS start_codon 6518 6520 . + 0 transcript_id "g150.t1"; gene_id "g150"; chr2L_7775118-7782118 AUGUSTUS CDS 6518 6751 0.91 + 0 transcript_id "g150.t1"; gene_id "g150"; chr2L_7775118-7782118 AUGUSTUS stop_codon 6749 6751 . + 0 transcript_id "g150.t1"; gene_id "g150"; # protein sequence = [MTNRLALHHILTTQLRRDWEQEESAKTRLSQLSRRDRIKASLRSSQLPGRYLLPDTRKTYDNMVANIHSTMKCKLLC] # end gene g150 ### # # ----- sequence number 98 (length = 9070, name = chr2L_7791930-7800999) ----- # # annotation: # Sequence chr2L_7791930-7800999 length=9070 chr2L_7791930-7800999 database stop_codon 5001 5003 . - 0 transcript_id "g1150.t1.1"; gene_id "g1150.t1"; chr2L_7791930-7800999 database intron 5398 5467 . - . transcript_id "g1150.t1.1"; gene_id "g1150.t1"; chr2L_7791930-7800999 database intron 5804 6233 . - . transcript_id "g1150.t1.1"; gene_id "g1150.t1"; chr2L_7791930-7800999 database intron 6695 7379 . - . transcript_id "g1150.t1.1"; gene_id "g1150.t1"; chr2L_7791930-7800999 database CDS 5001 5397 . - 1 transcript_id "g1150.t1.1"; gene_id "g1150.t1"; chr2L_7791930-7800999 database CDS 5468 5803 . - 1 transcript_id "g1150.t1.1"; gene_id "g1150.t1"; chr2L_7791930-7800999 database CDS 6234 6694 . - 0 transcript_id "g1150.t1.1"; gene_id "g1150.t1"; chr2L_7791930-7800999 database CDS 7380 7583 . - 0 transcript_id "g1150.t1.1"; gene_id "g1150.t1"; chr2L_7791930-7800999 database start_codon 7581 7583 . - 0 transcript_id "g1150.t1.1"; gene_id "g1150.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 98 on both strands # start gene g151 chr2L_7791930-7800999 AUGUSTUS gene 1 3905 0.89 - . g151 chr2L_7791930-7800999 AUGUSTUS transcript 1 3905 0.89 - . g151.t1 chr2L_7791930-7800999 AUGUSTUS intron 1 9 0.92 - . transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS intron 187 245 1 - . transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS intron 1402 1579 1 - . transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS intron 2155 2218 1 - . transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS intron 2598 2662 0.98 - . transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS intron 2840 3580 0.97 - . transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS intron 3725 3845 1 - . transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS CDS 10 186 0.92 - 2 transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS CDS 246 1401 1 - 0 transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS CDS 1580 2154 1 - 2 transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS CDS 2219 2597 1 - 0 transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS CDS 2663 2839 0.97 - 0 transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS CDS 3581 3724 1 - 0 transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS CDS 3846 3905 1 - 0 transcript_id "g151.t1"; gene_id "g151"; chr2L_7791930-7800999 AUGUSTUS start_codon 3903 3905 . - 0 transcript_id "g151.t1"; gene_id "g151"; # protein sequence = [MWRVIQLRATIAHPFTRQRHSRVIAIRREDQSVWERRAPFGPTHVQKLVKQNVKVIVQPSNRRAYPMQAYMQAGAHIQ # EDISDASVIFGVKQVPIDALIPGKTYCFFSHTIKAQESNMPLLDAILEKKIRLIDYERIIDERGARQVAFGKYAGVAGMVNILHGIGLRLLALGHHTP # FMHIGPAHNYRNSSMARQAIRDCGYEISLGMMPKSIGPLTFVFTGSGNVSQGAQEVFSELPIEYVPPEMLRKVAEHGNQNKLYGCEVSRSDHLERREG # GGFDAKEYDEFPERYISTFSTKIAPYASVIVNGIYWAVGSPKLISIPDAKNLLRPANTPWLPTSKGSPALPHRMLAICDISADPGGSIEFMNECTTID # TPFCLYDADRNKDTKSFKGPGVLVCSIDNMPTQLPRESTDLFGELLAPHVHDIIKSDAKKPLAEENFSYPIQSAIIASNGQLTEGFQYIQELRESQSH # RSRHKMEGSSESDKKVLVLGAGMVSAPLVEWLHREKDVSITVCSQVKEEADRLAQQYAGVDSVYLDVNESTGHLQELCGRADVVVSLLPYSLHGMVAR # YCVAEGTHMVTASYLNDEISGLHEEAKAKGVTIMNEVGLDPGIDHLLALECIHEVQDKGAVVESFVSYCGGLPAPEHSNNALRYKFSWSPRGVLLNTL # SAAKYLSQGQIVEISGGGELMSSPRSLDFLPGFALEGFPNRDSTKYGNLYGLGRDVHTLLRGTIRYKGFSESIKPMQLLGLIDPEPHALLHPSGPDVT # WRQLVIHLMGMSDSTIFYENLKQKLTERIGDVDGIESLGLLDDTPVVKLNTPLDTLSHYLSKRLAFERDERDLVVLRHEVGIRWPDGRREERGINFVV # YGQPQGHSAMAMTVGKPAAIAAKMILD] # end gene g151 ### # start gene g152 chr2L_7791930-7800999 AUGUSTUS gene 5001 7583 0.87 - . g152 chr2L_7791930-7800999 AUGUSTUS transcript 5001 7583 0.87 - . g152.t1 chr2L_7791930-7800999 AUGUSTUS stop_codon 5001 5003 . - 0 transcript_id "g152.t1"; gene_id "g152"; chr2L_7791930-7800999 AUGUSTUS intron 5398 5467 1 - . transcript_id "g152.t1"; gene_id "g152"; chr2L_7791930-7800999 AUGUSTUS intron 5804 6233 1 - . transcript_id "g152.t1"; gene_id "g152"; chr2L_7791930-7800999 AUGUSTUS intron 6686 7379 0.87 - . transcript_id "g152.t1"; gene_id "g152"; chr2L_7791930-7800999 AUGUSTUS CDS 5001 5397 1 - 1 transcript_id "g152.t1"; gene_id "g152"; chr2L_7791930-7800999 AUGUSTUS CDS 5468 5803 1 - 1 transcript_id "g152.t1"; gene_id "g152"; chr2L_7791930-7800999 AUGUSTUS CDS 6234 6685 0.87 - 0 transcript_id "g152.t1"; gene_id "g152"; chr2L_7791930-7800999 AUGUSTUS CDS 7380 7583 1 - 0 transcript_id "g152.t1"; gene_id "g152"; chr2L_7791930-7800999 AUGUSTUS start_codon 7581 7583 . - 0 transcript_id "g152.t1"; gene_id "g152"; # protein sequence = [MEENAAPPAAATAAGCDAATRQKNPETSVRLLIKSSNQQYEDLNVDSDLCWTVQRLKKHLSLIYPGKPDQKLIYSGKL # LDDSQKISEVIRSYKDVYQQHHIFHLVCASKQVIRPAAKAPTVPQKDAVPAGPEVTGNANELRQRHAPHQQQAQQGNAGPHVTGDIGLANPWTHFWQQ # SQGAAPAANASASPHALFQQQALIYNAWMQQAYAQYMQQLTLRSTLPGSNQSGLPPPTQPLLPSVPLIAGRNFGEVQQVAGAAAAPAAQVPADPQING # APQNRNFPNIQEEPEMHDWLDSFFSFTRLAIFVTVLYFNSSALRCLLVVLIAGAIYLYHIGVLRRRRERNNNNINRNNNAGDAAAFAAVQQIQRMMDA # AVQRENNDPQAANEPGAVPAAGPAAAGEQDAIDAPPAGAPVAPASAANPEPTDVSAEAVEPPNANNSVISVVRTFVITFFTSLLPEAPAL] # end gene g152 ### # start gene g153 chr2L_7791930-7800999 AUGUSTUS gene 8875 9070 0.43 + . g153 chr2L_7791930-7800999 AUGUSTUS transcript 8875 9070 0.43 + . g153.t1 chr2L_7791930-7800999 AUGUSTUS start_codon 8875 8877 . + 0 transcript_id "g153.t1"; gene_id "g153"; chr2L_7791930-7800999 AUGUSTUS CDS 8875 9070 0.43 + 0 transcript_id "g153.t1"; gene_id "g153"; # protein sequence = [MKDSTVGDLDEELTNLNRDMVKELRDYCVRREMPLPCIEVVQQSGTPSAPEFVACCSVASIVRYG] # end gene g153 ### # # ----- sequence number 99 (length = 9997, name = chr2L_7801000-7810996) ----- # # annotation: # Sequence chr2L_7801000-7810996 length=9997 chr2L_7801000-7810996 database stop_codon 1488 1490 . - 0 transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database intron 2578 3571 . - . transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database intron 3917 4060 . - . transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database intron 4790 4853 . - . transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database intron 5525 5657 . - . transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database intron 5924 5990 . - . transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database CDS 1488 2577 . - 1 transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database CDS 3572 3916 . - 1 transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database CDS 4061 4789 . - 1 transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database CDS 4854 5524 . - 0 transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database CDS 5658 5923 . - 2 transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database CDS 5991 6045 . - 0 transcript_id "g1152.t1.1"; gene_id "g1152.t1"; chr2L_7801000-7810996 database start_codon 6043 6045 . - 0 transcript_id "g1152.t1.1"; gene_id "g1152.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 99 on both strands # start gene g154 chr2L_7801000-7810996 AUGUSTUS gene 1 512 0.98 + . g154 chr2L_7801000-7810996 AUGUSTUS transcript 1 512 0.98 + . g154.t1 chr2L_7801000-7810996 AUGUSTUS CDS 1 512 0.98 + 2 transcript_id "g154.t1"; gene_id "g154"; chr2L_7801000-7810996 AUGUSTUS stop_codon 510 512 . + 0 transcript_id "g154.t1"; gene_id "g154"; # protein sequence = [SDKKKDARQRAAIEMLALISSNSDNLRPDQMQVASTSKLKVVDMEESMEELEALRRKKFTTYWELKEAGSVDHTGMRL # CDRHNYFKNFYPTLKKEAIEAINSDEYESSKDKAMDVMSSLKITPKISEVESSSLVPLLSVELNCAFDVVLMAKETDIYDHIIDYFRTMLI] # end gene g154 ### # start gene g155 chr2L_7801000-7810996 AUGUSTUS gene 1488 6045 1 - . g155 chr2L_7801000-7810996 AUGUSTUS transcript 1488 6045 1 - . g155.t1 chr2L_7801000-7810996 AUGUSTUS stop_codon 1488 1490 . - 0 transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS intron 2578 3571 1 - . transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS intron 3920 4060 1 - . transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS intron 4790 4853 1 - . transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS intron 5525 5657 1 - . transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS intron 5924 5990 1 - . transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS CDS 1488 2577 1 - 1 transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS CDS 3572 3919 1 - 1 transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS CDS 4061 4789 1 - 1 transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS CDS 4854 5524 1 - 0 transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS CDS 5658 5923 1 - 2 transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS CDS 5991 6045 1 - 0 transcript_id "g155.t1"; gene_id "g155"; chr2L_7801000-7810996 AUGUSTUS start_codon 6043 6045 . - 0 transcript_id "g155.t1"; gene_id "g155"; # protein sequence = [MLDDDNSDLLVCASEMQEDRLYFVAFKKNIKPKNTVNTHYFSVDEEFIYENFYNDFGPLNICMLYRYCMKLNTKLNAK # CHANKKIVHYTSMNPAKRLNAAYLIGSYAIIYLNKTPQEAYRPLVAGEIPAYTRFCDASYGPSNFKISLLDCLNAVHKGLQAGFFNFNDFDAEEYEYF # ERVENGDFNWIVPQKFIAFCGPHQKSKTLPNGYPCHAPERYFSYFRDNNVTTVIRLNAKVYHASSFENAGFDHKDLFFIDGSTPSDAIMKKFLSICET # TKGAIAVHCKAGLGRTGSLIGAYIMKHYGFTALEAIAWLRLCRPGSVIGHQQQWMEDKQSWLWSEGERMRRRTSLPILQHTYGINSLELKKKLASAAA # DSTEHVDLLLTRVKGISQRVDTMHLNDQDNLDAACTDQTDEELSEQLRLERDERALYQSVEDPNCNNSDDNDTDTISAPADPPPTSSYTISTRRRKSP # SGANKPTVIATSLRRLVNPNANRSGLSTASGVYPTPELASCTEKKLRKPSANVFEAARHTIASTVRMTQTALEKKQAQTQGDKLNQIKALRRHHSRSV # NVNSNSSEQESNVRHTRARSQPFRNNNNGVGGNTAMAALKPTSSCLPTGTGTAALLANNLNNNNDCGIGTSGSSNNNHNNNNNNSNLSNSLNNYNNNN # NTTNNILASSGSSRTRSLALYSKRMELKHLRKAEQQQQQQVQQEQPLLPVEKQLLRQYATINESKIPVVSGGGGGAGSSATIPPTRGSAARTSHHHMT # LRGRSRIRYQRPNAGETAPAAAQTQPCTVATARYYRDVSAIPTIGVFGGGPGGSSSTSASFNIATRSASATLDLNSNPLPKTTKLTSLNNNPTTTPPP # SSNPADTSRLSGRGSAELQAIIEHGLVAGSAKRNKRSLSSTRLDKDKSDEYNTKLLRKTAAAAAAAATAASAVANSTSINATHATNASTTSSMNNNCK # YNSCSSSNSGSFKLSRRLFGESGSSASTSASNSGIPTPTAPPSSSQWQQHLVRGVSRASSEKDRDRERQQQQQQQSLDHQQSNLKLRKKISY] # end gene g155 ### # # ----- sequence number 100 (length = 6672, name = chr2L_8007788-8014459) ----- # # annotation: # Sequence chr2L_8007788-8014459 length=6672 chr2L_8007788-8014459 database stop_codon 655 657 . - 0 transcript_id "g1185.t1.1"; gene_id "g1185.t1"; chr2L_8007788-8014459 database intron 866 930 . - . transcript_id "g1185.t1.1"; gene_id "g1185.t1"; chr2L_8007788-8014459 database intron 1105 1160 . - . transcript_id "g1185.t1.1"; gene_id "g1185.t1"; chr2L_8007788-8014459 database intron 1409 1468 . - . transcript_id "g1185.t1.1"; gene_id "g1185.t1"; chr2L_8007788-8014459 database CDS 655 865 . - 1 transcript_id "g1185.t1.1"; gene_id "g1185.t1"; chr2L_8007788-8014459 database CDS 931 1104 . - 1 transcript_id "g1185.t1.1"; gene_id "g1185.t1"; chr2L_8007788-8014459 database CDS 1161 1408 . - 0 transcript_id "g1185.t1.1"; gene_id "g1185.t1"; chr2L_8007788-8014459 database CDS 1469 1672 . - 0 transcript_id "g1185.t1.1"; gene_id "g1185.t1"; chr2L_8007788-8014459 database start_codon 1670 1672 . - 0 transcript_id "g1185.t1.1"; gene_id "g1185.t1"; # Constraints/Hints: # (none) # Predicted genes for sequence number 100 on both strands # start gene g156 chr2L_8007788-8014459 AUGUSTUS gene 655 1672 0.89 - . g156 chr2L_8007788-8014459 AUGUSTUS transcript 655 1672 0.89 - . g156.t1 chr2L_8007788-8014459 AUGUSTUS stop_codon 655 657 . - 0 transcript_id "g156.t1"; gene_id "g156"; chr2L_8007788-8014459 AUGUSTUS intron 866 1160 0.89 - . transcript_id "g156.t1"; gene_id "g156"; chr2L_8007788-8014459 AUGUSTUS intron 1409 1468 1 - . transcript_id "g156.t1"; gene_id "g156"; chr2L_8007788-8014459 AUGUSTUS CDS 655 865 1 - 1 transcript_id "g156.t1"; gene_id "g156"; chr2L_8007788-8014459 AUGUSTUS CDS 1161 1408 0.94 - 0 transcript_id "g156.t1"; gene_id "g156"; chr2L_8007788-8014459 AUGUSTUS CDS 1469 1672 1 - 0 transcript_id "g156.t1"; gene_id "g156"; chr2L_8007788-8014459 AUGUSTUS start_codon 1670 1672 . - 0 transcript_id "g156.t1"; gene_id "g156"; # protein sequence = [MSTENSLVEIPRGEWTKLRDLYVARDTDPQGYPCINNFIKWVEIDPQLKVNFLSLNGDWQSDGTFVLTLRSDTHMNHI # YFNTLSENLDRVTKALECLKSIENEYDFFGFSTRLKPVVEYIGNKYYANKKLHTVDTVWYAASKELVDTFNIQLPIGSLGLLQVLESHKRLGLGSLLV # KSMAKKISAAGDQVLAPVVTKNTPSRSMFEKLGFRAIDNTYWAA] # end gene g156 ### a-posteriori probability of viterbi path ---------------------------------------- a-posteriori probability of correct path 100 times were the paths equally likely (identical). sorted quotients of the rest: 0 quotients were between 1 and 10 ******* Evaluation of gene prediction ******* ---------------------------------------------\ | sensitivity | specificity | ---------------------------------------------| nucleotide level | 0.873 | 0.626 | ---------------------------------------------/ ----------------------------------------------------------------------------------------------------------\ | #pred | #anno | | FP = false pos. | FN = false neg. | | | | total/ | total/ | TP |--------------------|--------------------| sensitivity | specificity | | unique | unique | | part | ovlp | wrng | part | ovlp | wrng | | | ----------------------------------------------------------------------------------------------------------| | | | | 253 | 101 | | | exon level | 484 | 332 | 231 | ------------------ | ------------------ | 0.696 | 0.477 | | 484 | 332 | | 35 | 0 | 218 | 36 | 0 | 65 | | | ----------------------------------------------------------------------------------------------------------/ ----------------------------------------------------------------------------\ transcript | #pred | #anno | TP | FP | FN | sensitivity | specificity | ----------------------------------------------------------------------------| gene level | 156 | 100 | 47 | 109 | 53 | 0.47 | 0.301 | ----------------------------------------------------------------------------/ ------------------------------------------------------------------------\ UTR | total pred | CDS bnd. corr. | meanDiff | medianDiff | ------------------------------------------------------------------------| TSS | 15 | 0 | -1 | -1 | TTS | 5 | 0 | -1 | -1 | ------------------------------------------------------------------------| UTR | uniq. pred | unique anno | sens. | spec. | ------------------------------------------------------------------------| | true positive = 1 bound. exact, 1 bound. <= 20bp off | UTR exon level | 0 | 0 | -nan | -nan | ------------------------------------------------------------------------| UTR base level | 0 | 0 | -nan | -nan | ------------------------------------------------------------------------/ nucUTP= 0 nucUFP=0 nucUFPinside= 0 nucUFN=0 # total time: 43.2 # command line: # augustus --species=bug genes.gb.test