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biom.table.Table.to_json

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biom.table.Table.to_json

Table.to_json(generated_by, direct_io=None)

Returns a JSON string representing the table in BIOM format.

Parameters:

generated_by : str

a string describing the software used to build the table

direct_io : file or file-like object, optional

Defaults to None. Must implementing a write function. If direct_io is not None, the final output is written directly to direct_io during processing.

Returns:

str

A JSON-formatted string representing the biom table

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