bpp-core  2.2.0
bpp::BetaDiscreteDistribution Member List

This is the complete list of members for bpp::BetaDiscreteDistribution, including all inherited members.

AbstractDiscreteDistribution(size_t nbClasses, const std::string &prefix="")bpp::AbstractDiscreteDistribution
AbstractDiscreteDistribution(size_t nbClasses, double precision, const std::string &prefix="")bpp::AbstractDiscreteDistribution
AbstractDiscreteDistribution(const AbstractDiscreteDistribution &adde)bpp::AbstractDiscreteDistribution
AbstractParameterAliasable(const std::string &prefix)bpp::AbstractParameterAliasableinline
AbstractParameterAliasable(const AbstractParameterAliasable &ap)bpp::AbstractParameterAliasable
AbstractParametrizable(const std::string &prefix)bpp::AbstractParametrizableinline
add(double category, double probability)bpp::AbstractDiscreteDistributionvirtual
addParameter_(Parameter *parameter)bpp::AbstractParameterAliasableinlineprotected
addParameters_(const ParameterList &parameters)bpp::AbstractParameterAliasableinlineprotected
bpp::aliasParameters(const std::string &p1, const std::string &p2)=0bpp::ParameterAliasablepure virtual
bpp::aliasParameters(std::map< std::string, std::string > &unparsedParams, bool verbose)=0bpp::ParameterAliasablepure virtual
bpp::AbstractParameterAliasable::aliasParameters(const std::string &p1, const std::string &p2)bpp::AbstractParameterAliasablevirtual
bpp::AbstractParameterAliasable::aliasParameters(std::map< std::string, std::string > &unparsedParams, bool verbose)bpp::AbstractParameterAliasablevirtual
alpha_bpp::BetaDiscreteDistributionprivate
beta_bpp::BetaDiscreteDistributionprivate
BetaDiscreteDistribution(size_t n, double alpha=1, double beta=1)bpp::BetaDiscreteDistribution
BetaDiscreteDistribution(const BetaDiscreteDistribution &)bpp::BetaDiscreteDistribution
bounds_bpp::AbstractDiscreteDistributionprotected
Clonable()bpp::Clonableinline
clone() constbpp::BetaDiscreteDistributioninlinevirtual
deleteParameter_(size_t index)bpp::AbstractParameterAliasableinlineprotected
deleteParameter_(std::string &name)bpp::AbstractParameterAliasableinlineprotected
deleteParameters_(const std::vector< std::string > &names)bpp::AbstractParameterAliasableinlineprotected
diffln_bpp::BetaDiscreteDistributionprivate
DiscreteDistribution()bpp::DiscreteDistributioninline
discretize()bpp::AbstractDiscreteDistributionvirtual
distribution_bpp::AbstractDiscreteDistributionprotected
Expectation(double a) constbpp::BetaDiscreteDistributionvirtual
fireParameterChanged(const ParameterList &parameters)bpp::BetaDiscreteDistributionvirtual
bpp::getAlias(const std::string &name) const =0bpp::ParameterAliasablepure virtual
bpp::AbstractParameterAliasable::getAlias(const std::string &name) constbpp::AbstractParameterAliasablevirtual
getAliasedParameters(const ParameterList &pl) constbpp::AbstractParameterAliasable
getBound(size_t i) constbpp::AbstractDiscreteDistributioninlinevirtual
getBounds() constbpp::AbstractDiscreteDistributionvirtual
getCategories() constbpp::AbstractDiscreteDistributionvirtual
getCategory(size_t categoryIndex) constbpp::AbstractDiscreteDistributionvirtual
getFrom(const std::string &name) constbpp::AbstractParameterAliasable
getIInfCumulativeProbability(double category) constbpp::AbstractDiscreteDistributionvirtual
bpp::getIndependentParameters() const =0bpp::ParameterAliasablepure virtual
bpp::AbstractParameterAliasable::getIndependentParameters() constbpp::AbstractParameterAliasableinlinevirtual
getInfCumulativeProbability(double category) constbpp::AbstractDiscreteDistributionvirtual
getLowerBound() constbpp::AbstractDiscreteDistributioninlinevirtual
getName() constbpp::BetaDiscreteDistributioninlinevirtual
bpp::getNamespace() const =0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::getNamespace() constbpp::AbstractParametrizableinlinevirtual
getNumberOfCategories() constbpp::AbstractDiscreteDistributionvirtual
bpp::getNumberOfIndependentParameters() const =0bpp::ParameterAliasablepure virtual
bpp::AbstractParameterAliasable::getNumberOfIndependentParameters() constbpp::AbstractParameterAliasableinlinevirtual
bpp::getNumberOfParameters() const =0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::getNumberOfParameters() constbpp::AbstractParametrizableinlinevirtual
bpp::getParameter(const std::string &name) const =0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::getParameter(const std::string &name) constbpp::AbstractParametrizableinlinevirtual
getParameter_(const std::string &name)bpp::AbstractParametrizableinlineprotected
getParameter_(size_t index)bpp::AbstractParametrizableinlineprotected
getParameter_(size_t index) constbpp::AbstractParametrizableinlineprotected
bpp::getParameterNameWithoutNamespace(const std::string &name) const =0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::getParameterNameWithoutNamespace(const std::string &name) constbpp::AbstractParametrizablevirtual
bpp::getParameters() const =0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::getParameters() constbpp::AbstractParametrizableinlinevirtual
getParameters_()bpp::AbstractParametrizableinlineprotected
bpp::getParameterValue(const std::string &name) const =0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::getParameterValue(const std::string &name) constbpp::AbstractParametrizableinlinevirtual
getParameterWithNamespace_(const std::string &name)bpp::AbstractParametrizableinlineprotected
getParameterWithNamespace_(const std::string &name) constbpp::AbstractParametrizableinlineprotected
getProbabilities() constbpp::AbstractDiscreteDistributionvirtual
getProbability(size_t categoryIndex) constbpp::AbstractDiscreteDistributionvirtual
getProbability(double category) constbpp::AbstractDiscreteDistributionvirtual
getSSupCumulativeProbability(double category) constbpp::AbstractDiscreteDistributionvirtual
getSupCumulativeProbability(double category) constbpp::AbstractDiscreteDistributionvirtual
getUpperBound() constbpp::AbstractDiscreteDistributioninlinevirtual
getValueCategory(double value) constbpp::AbstractDiscreteDistributionvirtual
bpp::hasParameter(const std::string &name) const =0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::hasParameter(const std::string &name) constbpp::AbstractParametrizableinlinevirtual
intMinMax_bpp::AbstractDiscreteDistributionprotected
bpp::matchParametersValues(const ParameterList &parameters)=0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::matchParametersValues(const ParameterList &parameters)bpp::AbstractParametrizableinlinevirtual
median_bpp::AbstractDiscreteDistributionprotected
numberOfCategories_bpp::AbstractDiscreteDistributionprotected
operator=(const BetaDiscreteDistribution &)bpp::BetaDiscreteDistribution
bpp::AbstractDiscreteDistribution::operator=(const AbstractDiscreteDistribution &adde)bpp::AbstractDiscreteDistribution
bpp::AbstractParameterAliasable::operator=(const AbstractParameterAliasable &ap)bpp::AbstractParameterAliasable
ParameterAliasable()bpp::ParameterAliasableinline
Parametrizable()bpp::Parametrizableinline
pProb(double x) constbpp::BetaDiscreteDistributionvirtual
precision() constbpp::AbstractDiscreteDistributioninline
print(OutputStream &out) constbpp::AbstractDiscreteDistributionvirtual
qProb(double x) constbpp::BetaDiscreteDistributionvirtual
rand() constbpp::AbstractDiscreteDistributionvirtual
randC() constbpp::BetaDiscreteDistributioninlinevirtual
resetParameters_()bpp::AbstractParameterAliasableinlineprotected
restrictToConstraint(const Constraint &c)bpp::AbstractDiscreteDistributionvirtual
set(double category, double probability)bpp::AbstractDiscreteDistributionvirtual
bpp::setAllParametersValues(const ParameterList &parameters)=0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::setAllParametersValues(const ParameterList &parameters)bpp::AbstractParametrizableinlinevirtual
setMedian(bool median)bpp::AbstractDiscreteDistributioninlinevirtual
bpp::setNamespace(const std::string &prefix)=0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::setNamespace(const std::string &prefix)bpp::AbstractParameterAliasablevirtual
setNumberOfCategories(size_t nbClasses)bpp::AbstractDiscreteDistributionvirtual
bpp::setParametersValues(const ParameterList &parameters)=0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::setParametersValues(const ParameterList &parameters)bpp::AbstractParametrizableinlinevirtual
bpp::setParameterValue(const std::string &name, double value)=0bpp::Parametrizablepure virtual
bpp::AbstractParameterAliasable::setParameterValue(const std::string &name, double value)bpp::AbstractParametrizableinlinevirtual
strictLowerBound() constbpp::AbstractDiscreteDistributioninlinevirtual
strictUpperBound() constbpp::AbstractDiscreteDistributioninlinevirtual
bpp::unaliasParameters(const std::string &p1, const std::string &p2)=0bpp::ParameterAliasablepure virtual
bpp::AbstractParameterAliasable::unaliasParameters(const std::string &p1, const std::string &p2)bpp::AbstractParameterAliasablevirtual
~AbstractDiscreteDistribution()bpp::AbstractDiscreteDistributioninlinevirtual
~AbstractParameterAliasable()bpp::AbstractParameterAliasablevirtual
~AbstractParametrizable()bpp::AbstractParametrizableinlinevirtual
~Clonable()bpp::Clonableinlinevirtual
~DiscreteDistribution()bpp::DiscreteDistributioninlinevirtual
~ParameterAliasable()bpp::ParameterAliasableinlinevirtual
~Parametrizable()bpp::Parametrizableinlinevirtual