bpp-core  2.2.0
bpp::HmmStateAlphabet Member List

This is the complete list of members for bpp::HmmStateAlphabet, including all inherited members.

Clonable()bpp::Clonableinline
clone() const =0bpp::Clonablepure virtual
getNamespace() const =0bpp::Parametrizablepure virtual
getNumberOfParameters() const =0bpp::Parametrizablepure virtual
getNumberOfStates() const =0bpp::HmmStateAlphabetpure virtual
getParameter(const std::string &name) const =0bpp::Parametrizablepure virtual
getParameterNameWithoutNamespace(const std::string &name) const =0bpp::Parametrizablepure virtual
getParameters() const =0bpp::Parametrizablepure virtual
getParameterValue(const std::string &name) const =0bpp::Parametrizablepure virtual
getState(size_t stateIndex) const =0bpp::HmmStateAlphabetpure virtual
hasParameter(const std::string &name) const =0bpp::Parametrizablepure virtual
HmmStateAlphabet()bpp::HmmStateAlphabetinline
matchParametersValues(const ParameterList &parameters)=0bpp::Parametrizablepure virtual
Parametrizable()bpp::Parametrizableinline
setAllParametersValues(const ParameterList &parameters)=0bpp::Parametrizablepure virtual
setNamespace(const std::string &prefix)=0bpp::Parametrizablepure virtual
setParametersValues(const ParameterList &parameters)=0bpp::Parametrizablepure virtual
setParameterValue(const std::string &name, double value)=0bpp::Parametrizablepure virtual
worksWith(const HmmStateAlphabet *stateAlphabet) const =0bpp::HmmStateAlphabetpure virtual
~Clonable()bpp::Clonableinlinevirtual
~HmmStateAlphabet()bpp::HmmStateAlphabetinlinevirtual
~Parametrizable()bpp::Parametrizableinlinevirtual