bpp-phyl  2.2.0
bpp::AbstractRewardMapping Member List

This is the complete list of members for bpp::AbstractRewardMapping, including all inherited members.

AbstractMapping(const Tree &tree)bpp::AbstractMappinginline
AbstractMapping(const AbstractMapping &absm)bpp::AbstractMappinginline
AbstractRewardMapping(const Tree &tree)bpp::AbstractRewardMappinginline
AbstractRewardMapping(const AbstractRewardMapping &arm)bpp::AbstractRewardMappinginline
clone() const =0bpp::AbstractRewardMappingpure virtual
bpp::getBranchLengths() const =0bpp::Mappingpure virtual
bpp::AbstractMapping::getBranchLengths() constbpp::AbstractMappinginlinevirtual
getNode(size_t nodeIndex) constbpp::AbstractMappinginlinevirtual
bpp::getNodeIndex(int nodeId) const =0bpp::Mappingpure virtual
bpp::AbstractMapping::getNodeIndex(int nodeId) constbpp::AbstractMappinginlinevirtual
bpp::getNumberOfBranches() const =0bpp::Mappingpure virtual
bpp::AbstractMapping::getNumberOfBranches() constbpp::AbstractMappinginlinevirtual
bpp::getNumberOfSites() const =0bpp::Mappingpure virtual
bpp::AbstractMapping::getNumberOfSites() constbpp::AbstractMappinginlinevirtual
bpp::getSitePosition(size_t index) const =0bpp::Mappingpure virtual
bpp::AbstractMapping::getSitePosition(size_t index) constbpp::AbstractMappinginlinevirtual
bpp::getTree() const =0bpp::Mappingpure virtual
bpp::AbstractMapping::getTree() constbpp::AbstractMappinginlinevirtual
bpp::isEmpty() const =0bpp::Mappingpure virtual
bpp::AbstractMapping::isEmpty() constbpp::AbstractMappinginlinevirtual
Mapping()bpp::Mappinginline
operator()(size_t nodeIndex, size_t siteIndex)=0bpp::RewardMappingpure virtual
operator()(size_t nodeIndex, size_t siteIndex) const =0bpp::RewardMappingpure virtual
operator=(const AbstractRewardMapping &arm)bpp::AbstractRewardMappinginline
bpp::AbstractMapping::operator=(const AbstractMapping &absm)bpp::AbstractMappinginline
RewardMapping()bpp::RewardMappinginline
setNumberOfSites(size_t numberOfSites)bpp::AbstractMappinginlinevirtual
bpp::setSitePosition(size_t index, int position)=0bpp::Mappingpure virtual
bpp::AbstractMapping::setSitePosition(size_t index, int position)bpp::AbstractMappinginlinevirtual
setTree(const Tree &tree)bpp::AbstractMappinginline
~AbstractMapping()bpp::AbstractMappinginlinevirtual
~AbstractRewardMapping()bpp::AbstractRewardMappinginlinevirtual
~Mapping()bpp::Mappinginlinevirtual
~RewardMapping()bpp::RewardMappinginlinevirtual