bpp::AbstractTreeLikelihoodData Member List

This is the complete list of members for bpp::AbstractTreeLikelihoodData, including all inherited members.

AbstractTreeLikelihoodData(const TreeTemplate< Node > *tree)	bpp::AbstractTreeLikelihoodData	inline
AbstractTreeLikelihoodData(const AbstractTreeLikelihoodData &atd)	bpp::AbstractTreeLikelihoodData	inline
alphabet_	bpp::AbstractTreeLikelihoodData	protected
clone() const =0	bpp::TreeLikelihoodData	pure virtual
getAlphabet() const	bpp::AbstractTreeLikelihoodData	inlinevirtual
getArrayPosition(int parentId, int sonId, size_t currentPosition) const =0	bpp::TreeLikelihoodData	pure virtual
getNodeData(int nodeId)=0	bpp::TreeLikelihoodData	pure virtual
getNodeData(int nodeId) const =0	bpp::TreeLikelihoodData	pure virtual
getNumberOfDistinctSites() const =0	bpp::TreeLikelihoodData	pure virtual
getNumberOfSites() const =0	bpp::TreeLikelihoodData	pure virtual
getNumberOfStates() const =0	bpp::TreeLikelihoodData	pure virtual
getRootArrayPosition(const size_t site) const	bpp::AbstractTreeLikelihoodData	inlinevirtual
getRootArrayPositions()	bpp::AbstractTreeLikelihoodData	inline
getRootArrayPositions() const	bpp::AbstractTreeLikelihoodData	inline
getTree() const	bpp::AbstractTreeLikelihoodData	inlinevirtual
getWeight(size_t pos) const	bpp::AbstractTreeLikelihoodData	inlinevirtual
getWeights() const	bpp::AbstractTreeLikelihoodData	inlinevirtual
operator=(const AbstractTreeLikelihoodData &atd)	bpp::AbstractTreeLikelihoodData	inline
rootPatternLinks_	bpp::AbstractTreeLikelihoodData	protected
rootWeights_	bpp::AbstractTreeLikelihoodData	protected
tree_	bpp::AbstractTreeLikelihoodData	protected
TreeLikelihoodData()	bpp::TreeLikelihoodData	inline
~AbstractTreeLikelihoodData()	bpp::AbstractTreeLikelihoodData	inlinevirtual
~TreeLikelihoodData()	bpp::TreeLikelihoodData	inlinevirtual