bpp-phyl
2.2.0
|
This is the complete list of members for bpp::CoalaCore, including all inherited members.
clone() const | bpp::CoalaCore | inline |
CoalaCore(size_t nbAxes=0, const std::string &exch="LG08") | bpp::CoalaCore | |
colWeights_ | bpp::CoalaCore | protected |
computeCOA(const SequenceContainer &data, bool param=true) | bpp::CoalaCore | protected |
exch_ | bpp::CoalaCore | protected |
getColumnWeights() const | bpp::CoalaCore | inline |
getNbrOfAxes() const | bpp::CoalaCore | inline |
getRowCoordinates() const | bpp::CoalaCore | inline |
getTppalAxesMatrix() const | bpp::CoalaCore | inline |
init_ | bpp::CoalaCore | protected |
nbrOfAxes_ | bpp::CoalaCore | protected |
P_ | bpp::CoalaCore | protected |
paramValues_ | bpp::CoalaCore | protected |
prodMatrixVector(RowMatrix< double > &P, std::vector< double > &V) | bpp::CoalaCore | protected |
R_ | bpp::CoalaCore | protected |
setParamValues(const std::map< std::string, std::string > &valuesSettings) | bpp::CoalaCore | inline |
~CoalaCore() | bpp::CoalaCore | inlinevirtual |