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bpp-phyl
2.2.0
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This is the complete list of members for bpp::CoalaCore, including all inherited members.
| clone() const | bpp::CoalaCore | inline |
| CoalaCore(size_t nbAxes=0, const std::string &exch="LG08") | bpp::CoalaCore | |
| colWeights_ | bpp::CoalaCore | protected |
| computeCOA(const SequenceContainer &data, bool param=true) | bpp::CoalaCore | protected |
| exch_ | bpp::CoalaCore | protected |
| getColumnWeights() const | bpp::CoalaCore | inline |
| getNbrOfAxes() const | bpp::CoalaCore | inline |
| getRowCoordinates() const | bpp::CoalaCore | inline |
| getTppalAxesMatrix() const | bpp::CoalaCore | inline |
| init_ | bpp::CoalaCore | protected |
| nbrOfAxes_ | bpp::CoalaCore | protected |
| P_ | bpp::CoalaCore | protected |
| paramValues_ | bpp::CoalaCore | protected |
| prodMatrixVector(RowMatrix< double > &P, std::vector< double > &V) | bpp::CoalaCore | protected |
| R_ | bpp::CoalaCore | protected |
| setParamValues(const std::map< std::string, std::string > &valuesSettings) | bpp::CoalaCore | inline |
| ~CoalaCore() | bpp::CoalaCore | inlinevirtual |