bpp::LaplaceSubstitutionCount Member List

This is the complete list of members for bpp::LaplaceSubstitutionCount, including all inherited members.

AbstractSubstitutionCount(SubstitutionRegister *reg)	bpp::AbstractSubstitutionCount	inline
AbstractSubstitutionCount(const AbstractSubstitutionCount &asc)	bpp::AbstractSubstitutionCount	inline
clone() const	bpp::LaplaceSubstitutionCount	inlinevirtual
computeCounts(double length) const	bpp::LaplaceSubstitutionCount	protected
currentLength_	bpp::LaplaceSubstitutionCount	mutableprivate
cutOff_	bpp::LaplaceSubstitutionCount	private
getAllNumbersOfSubstitutions(double length, size_t type=1) const	bpp::LaplaceSubstitutionCount	virtual
getAlphabet() const	bpp::SubstitutionCount	inlinevirtual
getNumberOfStates() const	bpp::SubstitutionCount	inlinevirtual
getNumberOfSubstitutions(size_t initialState, size_t finalState, double length, size_t type=1) const	bpp::LaplaceSubstitutionCount	virtual
getNumberOfSubstitutionsForEachType(size_t initialState, size_t finalState, double length) const	bpp::LaplaceSubstitutionCount	inlinevirtual
getNumberOfSubstitutionTypes() const	bpp::SubstitutionCount	inlinevirtual
getSubstitutionRegister() const	bpp::AbstractSubstitutionCount	inlinevirtual
getSubstitutionRegister()	bpp::AbstractSubstitutionCount	inlinevirtual
hasSubstitutionRegister() const	bpp::AbstractSubstitutionCount	inlinevirtual
LaplaceSubstitutionCount(const SubstitutionModel *model, size_t cutOff)	bpp::LaplaceSubstitutionCount	inline
LaplaceSubstitutionCount(const LaplaceSubstitutionCount &asc)	bpp::LaplaceSubstitutionCount	inline
m_	bpp::LaplaceSubstitutionCount	mutableprivate
model_	bpp::LaplaceSubstitutionCount	private
operator=(const LaplaceSubstitutionCount &asc)	bpp::LaplaceSubstitutionCount	inline
bpp::AbstractSubstitutionCount::operator=(const AbstractSubstitutionCount &asc)	bpp::AbstractSubstitutionCount	inline
register_	bpp::AbstractSubstitutionCount	protected
setSubstitutionModel(const SubstitutionModel *model)	bpp::LaplaceSubstitutionCount	virtual
setSubstitutionRegister(SubstitutionRegister *reg)	bpp::LaplaceSubstitutionCount	inlinevirtual
SubstitutionCount()	bpp::SubstitutionCount	inline
substitutionRegisterHasChanged()	bpp::LaplaceSubstitutionCount	inlineprotectedvirtual
~AbstractSubstitutionCount()	bpp::AbstractSubstitutionCount	inline
~LaplaceSubstitutionCount()	bpp::LaplaceSubstitutionCount	inlinevirtual
~SubstitutionCount()	bpp::SubstitutionCount	inlinevirtual