bpp-phyl
2.2.0
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This is the complete list of members for bpp::MarkovModulatedStateMap, including all inherited members.
AbstractStateMap(const Alphabet *alphabet) | bpp::AbstractStateMap | inline |
AbstractStateMap(const AbstractStateMap &absm) | bpp::AbstractStateMap | inline |
alphabet_ | bpp::AbstractStateMap | protected |
clone() const | bpp::MarkovModulatedStateMap | inlinevirtual |
getAlphabet() const | bpp::AbstractStateMap | inlinevirtual |
getAlphabetStateAsChar(size_t index) const | bpp::AbstractStateMap | inlinevirtual |
getAlphabetStateAsInt(size_t index) const | bpp::AbstractStateMap | inlinevirtual |
getAlphabetStates() const | bpp::AbstractStateMap | inlinevirtual |
getModelStates(int code) const | bpp::AbstractStateMap | inlinevirtual |
getModelStates(const std::string &code) const | bpp::AbstractStateMap | inlinevirtual |
getNumberOfModelStates() const | bpp::AbstractStateMap | inlinevirtual |
MarkovModulatedStateMap(const StateMap &unitMap, unsigned int nbClasses) | bpp::MarkovModulatedStateMap | |
operator=(const AbstractStateMap &absm) | bpp::AbstractStateMap | inline |
states_ | bpp::AbstractStateMap | protected |
~StateMap() | bpp::StateMap | inlinevirtual |