bpp-phyl  2.2.0
bpp::MarkovModulatedStateMap Member List

This is the complete list of members for bpp::MarkovModulatedStateMap, including all inherited members.

AbstractStateMap(const Alphabet *alphabet)bpp::AbstractStateMapinline
AbstractStateMap(const AbstractStateMap &absm)bpp::AbstractStateMapinline
alphabet_bpp::AbstractStateMapprotected
clone() constbpp::MarkovModulatedStateMapinlinevirtual
getAlphabet() constbpp::AbstractStateMapinlinevirtual
getAlphabetStateAsChar(size_t index) constbpp::AbstractStateMapinlinevirtual
getAlphabetStateAsInt(size_t index) constbpp::AbstractStateMapinlinevirtual
getAlphabetStates() constbpp::AbstractStateMapinlinevirtual
getModelStates(int code) constbpp::AbstractStateMapinlinevirtual
getModelStates(const std::string &code) constbpp::AbstractStateMapinlinevirtual
getNumberOfModelStates() constbpp::AbstractStateMapinlinevirtual
MarkovModulatedStateMap(const StateMap &unitMap, unsigned int nbClasses)bpp::MarkovModulatedStateMap
operator=(const AbstractStateMap &absm)bpp::AbstractStateMapinline
states_bpp::AbstractStateMapprotected
~StateMap()bpp::StateMapinlinevirtual