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bpp-phyl
2.2.0
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This is the complete list of members for bpp::MarkovModulatedStateMap, including all inherited members.
| AbstractStateMap(const Alphabet *alphabet) | bpp::AbstractStateMap | inline |
| AbstractStateMap(const AbstractStateMap &absm) | bpp::AbstractStateMap | inline |
| alphabet_ | bpp::AbstractStateMap | protected |
| clone() const | bpp::MarkovModulatedStateMap | inlinevirtual |
| getAlphabet() const | bpp::AbstractStateMap | inlinevirtual |
| getAlphabetStateAsChar(size_t index) const | bpp::AbstractStateMap | inlinevirtual |
| getAlphabetStateAsInt(size_t index) const | bpp::AbstractStateMap | inlinevirtual |
| getAlphabetStates() const | bpp::AbstractStateMap | inlinevirtual |
| getModelStates(int code) const | bpp::AbstractStateMap | inlinevirtual |
| getModelStates(const std::string &code) const | bpp::AbstractStateMap | inlinevirtual |
| getNumberOfModelStates() const | bpp::AbstractStateMap | inlinevirtual |
| MarkovModulatedStateMap(const StateMap &unitMap, unsigned int nbClasses) | bpp::MarkovModulatedStateMap | |
| operator=(const AbstractStateMap &absm) | bpp::AbstractStateMap | inline |
| states_ | bpp::AbstractStateMap | protected |
| ~StateMap() | bpp::StateMap | inlinevirtual |