bpp::Nhx Member List

This is the complete list of members for bpp::Nhx, including all inherited members.

AbstractIMultiTree()	bpp::AbstractIMultiTree	inline
AbstractITree()	bpp::AbstractITree	inline
AbstractOMultiTree()	bpp::AbstractOMultiTree	inline
AbstractOTree()	bpp::AbstractOTree	inline
changeNamesToTags(Node &node) const	bpp::Nhx
changeTagsToNames(Node &node) const	bpp::Nhx
getDataType() const	bpp::IOTree	inlinevirtual
getElement(const std::string &elt) const	bpp::Nhx	protected
getFormatDescription() const	bpp::Nhx
getFormatName() const	bpp::Nhx
hasIds_	bpp::Nhx	mutableprivate
IMultiTree()	bpp::IMultiTree	inline
IOTree()	bpp::IOTree	inline
ITree()	bpp::ITree	inline
Nhx(bool useTagsAsPptNames=true)	bpp::Nhx
nodeToParenthesis(const Node &node) const	bpp::Nhx	protected
OMultiTree()	bpp::OMultiTree	inline
OTree()	bpp::OTree	inline
parenthesisToNode(const std::string &description) const	bpp::Nhx	protected
parenthesisToTree(const std::string &description) const	bpp::Nhx
propertiesToParenthesis(const Node &node) const	bpp::Nhx	protected
propertyToString_(const Clonable *pptObject, short type)	bpp::Nhx	protectedstatic
read(const std::string &path) const	bpp::Nhx	inlinevirtual
read(std::istream &in) const	bpp::Nhx	virtual
read(const std::string &path, std::vector< Tree *> &trees) const	bpp::Nhx	inlinevirtual
read(std::istream &in, std::vector< Tree *> &trees) const	bpp::Nhx	virtual
registerProperty(const Property &property)	bpp::Nhx	inline
setNodeProperties(Node &node, const std::string properties) const	bpp::Nhx	protected
stringToProperty_(const std::string &pptDesc, short type)	bpp::Nhx	protectedstatic
supportedProperties_	bpp::Nhx	private
treeToParenthesis(const TreeTemplate< Node > &tree) const	bpp::Nhx
useTagsAsPropertyNames(bool yn)	bpp::Nhx	inline
useTagsAsPropertyNames() const	bpp::Nhx	inline
useTagsAsPropertyNames_	bpp::Nhx	private
write(const Tree &tree, const std::string &path, bool overwrite=true) const	bpp::Nhx	inlinevirtual
write(const Tree &tree, std::ostream &out) const	bpp::Nhx	inlinevirtual
write(const std::vector< Tree *> &trees, const std::string &path, bool overwrite=true) const	bpp::Nhx	inlinevirtual
write(const std::vector< Tree *> &trees, std::ostream &out) const	bpp::Nhx	inlinevirtual
write_(const Tree &tree, std::ostream &out) const	bpp::Nhx	protected
write_(const TreeTemplate< N > &tree, std::ostream &out) const	bpp::Nhx	protected
write_(const std::vector< Tree *> &trees, std::ostream &out) const	bpp::Nhx	protected
write_(const std::vector< TreeTemplate< N > *> &trees, std::ostream &out) const	bpp::Nhx	protected
~AbstractIMultiTree()	bpp::AbstractIMultiTree	inlinevirtual
~AbstractITree()	bpp::AbstractITree	inlinevirtual
~AbstractOMultiTree()	bpp::AbstractOMultiTree	inlinevirtual
~AbstractOTree()	bpp::AbstractOTree	inlinevirtual
~IMultiTree()	bpp::IMultiTree	inlinevirtual
~IOTree()	bpp::IOTree	inlinevirtual
~ITree()	bpp::ITree	inlinevirtual
~Nhx()	bpp::Nhx	inlinevirtual
~OMultiTree()	bpp::OMultiTree	inlinevirtual
~OTree()	bpp::OTree	inlinevirtual