bpp-phyl  2.2.0
bpp::ProteinFrequenciesSet Member List

This is the complete list of members for bpp::ProteinFrequenciesSet, including all inherited members.

clone() const =0bpp::ProteinFrequenciesSetpure virtual
FREQUENCE_CONSTRAINT_MILLIbpp::FrequenciesSetstatic
FREQUENCE_CONSTRAINT_SMALLbpp::FrequenciesSetstatic
getAlphabet() const =0bpp::ProteinFrequenciesSetpure virtual
getAlphabetStatesFrequencies() const =0bpp::FrequenciesSetpure virtual
getFrequencies() const =0bpp::FrequenciesSetpure virtual
getName() const =0bpp::FrequenciesSetpure virtual
getNumberOfFrequencies() const =0bpp::FrequenciesSetpure virtual
getStateMap() const =0bpp::FrequenciesSetpure virtual
setFrequencies(const std::vector< double > &frequencies)=0bpp::FrequenciesSetpure virtual
setFrequenciesFromAlphabetStatesFrequencies(const std::map< int, double > &frequencies)=0bpp::FrequenciesSetpure virtual