bpp-phyl  2.2.0
bpp::SubstitutionMapping Member List

This is the complete list of members for bpp::SubstitutionMapping, including all inherited members.

clone() const =0bpp::SubstitutionMappingpure virtual
getBranchLengths() const =0bpp::Mappingpure virtual
getNodeIndex(int nodeId) const =0bpp::Mappingpure virtual
getNumberOfBranches() const =0bpp::Mappingpure virtual
getNumberOfSites() const =0bpp::Mappingpure virtual
getNumberOfSubstitutionTypes() const =0bpp::SubstitutionMappingpure virtual
getSitePosition(size_t index) const =0bpp::Mappingpure virtual
getTree() const =0bpp::Mappingpure virtual
isEmpty() const =0bpp::Mappingpure virtual
Mapping()bpp::Mappinginline
operator()(size_t nodeIndex, size_t siteIndex, size_t type)=0bpp::SubstitutionMappingpure virtual
operator()(size_t nodeIndex, size_t siteIndex, size_t type) const =0bpp::SubstitutionMappingpure virtual
setSitePosition(size_t index, int position)=0bpp::Mappingpure virtual
SubstitutionMapping()bpp::SubstitutionMappinginline
~Mapping()bpp::Mappinginlinevirtual
~SubstitutionMapping()bpp::SubstitutionMappinginlinevirtual