bpp::Group Member List

This is the complete list of members for bpp::Group, including all inherited members.

addEmptyIndividual(const std::string &individual_id)	bpp::Group
addIndividual(const Individual &ind)	bpp::Group
addIndividualSequenceAtPosition(size_t individual_position, size_t sequence_position, const Sequence &sequence)	bpp::Group
clear()	bpp::Group
deleteIndividualAtPosition(size_t individual_position)	bpp::Group
deleteIndividualById(const std::string &individual_id)	bpp::Group
deleteIndividualGenotype(size_t individual_position)	bpp::Group
deleteIndividualSequenceAtPosition(size_t individual_position, size_t sequence_position)	bpp::Group
deleteIndividualSequenceByName(size_t individual_position, const std::string &sequence_name)	bpp::Group
getAlphabet() const	bpp::Group
getGroupId() const	bpp::Group	inline
getGroupName() const	bpp::Group	inline
getGroupSizeForLocus(size_t locus_position) const	bpp::Group
getGroupSizeForSequence(size_t sequence_position) const	bpp::Group
getIndividualAtPosition(size_t individual_position) const	bpp::Group
getIndividualById(const std::string &individual_id) const	bpp::Group
getIndividualCoordAtPosition(size_t individual_position) const	bpp::Group
getIndividualDateAtPosition(size_t individual_position) const	bpp::Group
getIndividualLocalityAtPosition(size_t individual_position) const	bpp::Group
getIndividualMonolocusGenotype(size_t individual_position, size_t locus_position) const	bpp::Group
getIndividualNumberOfSequences(size_t individual_position) const	bpp::Group
getIndividualPosition(const std::string &individual_id) const	bpp::Group
getIndividualSequenceAtPosition(size_t individual_position, size_t sequence_position) const	bpp::Group
getIndividualSequenceByName(size_t individual_position, const std::string &sequence_name) const	bpp::Group
getIndividualSequencePosition(size_t individual_position, const std::string &sequence_name) const	bpp::Group
getIndividualSequencesNames(size_t individual_position) const	bpp::Group
getIndividualSexAtPosition(size_t individual_position) const	bpp::Group
getMaxNumberOfSequences() const	bpp::Group
getNumberOfIndividuals() const	bpp::Group
Group(size_t group_id)	bpp::Group
Group(const Group &group)	bpp::Group
Group(const Group &group, size_t group_id)	bpp::Group
hasIndividualGenotype(size_t individual_position) const	bpp::Group
hasIndividualSequences(size_t individual_position) const	bpp::Group
hasSequenceData() const	bpp::Group
id_	bpp::Group	protected
individuals_	bpp::Group	protected
initIndividualGenotype(size_t individual_position, size_t loci_number)	bpp::Group
name_	bpp::Group	protected
operator=(const Group &group)	bpp::Group
removeIndividualAtPosition(size_t individual_position)	bpp::Group
removeIndividualById(const std::string &individual_id)	bpp::Group
setGroupId(size_t group_id)	bpp::Group
setGroupName(const std::string &group_name)	bpp::Group
setIndividualCoordAtPosition(size_t individual_position, const Point2D< double > &coord)	bpp::Group
setIndividualDateAtPosition(size_t individual_position, const Date &date)	bpp::Group
setIndividualGenotype(size_t individual_position, const MultilocusGenotype &genotype)	bpp::Group
setIndividualLocalityAtPosition(size_t individual_position, const Locality< double > *locality)	bpp::Group
setIndividualMonolocusGenotype(size_t individual_position, size_t locus_position, const MonolocusGenotype &monogen)	bpp::Group
setIndividualMonolocusGenotypeByAlleleId(size_t individual_position, size_t locus_position, const std::vector< std::string > &allele_id, const LocusInfo &locus_info)	bpp::Group
setIndividualMonolocusGenotypeByAlleleKey(size_t individual_position, size_t locus_position, const std::vector< size_t > &allele_keys)	bpp::Group
setIndividualSequences(size_t individual_position, const MapSequenceContainer &msc)	bpp::Group
setIndividualSexAtPosition(size_t individual_position, const unsigned short sex)	bpp::Group
~Group()	bpp::Group