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bpp-popgen
2.2.0
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This is the complete list of members for bpp::PopgenlibIO, including all inherited members.
| COMA | bpp::PopgenlibIO | static |
| data_separator_ | bpp::PopgenlibIO | private |
| DIPLOID | bpp::PopgenlibIO | static |
| getDataSeparator() const | bpp::PopgenlibIO | |
| getDataSeparatorChar() const | bpp::PopgenlibIO | |
| getFormatDescription() const | bpp::PopgenlibIO | inline |
| getFormatName() const | bpp::PopgenlibIO | inline |
| getMissingDataChar() const | bpp::PopgenlibIO | |
| getMissingDataSymbol() const | bpp::PopgenlibIO | |
| getValues_(std::string ¶m_line, const std::string &delim) | bpp::PopgenlibIO | private |
| HAPLODIPLOID | bpp::PopgenlibIO | static |
| HAPLOID | bpp::PopgenlibIO | static |
| missing_data_symbol_ | bpp::PopgenlibIO | private |
| parseGeneral_(const std::vector< std::string > &in, DataSet &data_set) | bpp::PopgenlibIO | private |
| parseIndividual_(const std::vector< std::string > &in, DataSet &data_set, const VectorSequenceContainer &vsc) | bpp::PopgenlibIO | private |
| parseLocality_(const std::vector< std::string > &in, DataSet &data_set) | bpp::PopgenlibIO | private |
| parseLoci_(const std::vector< std::string > &in, std::vector< LocusInfo > &locus_info) | bpp::PopgenlibIO | private |
| parseSequence_(const std::vector< std::string > &in, VectorSequenceContainer &vsc) | bpp::PopgenlibIO | private |
| PopgenlibIO() | bpp::PopgenlibIO | |
| PopgenlibIO(const std::string &missing_data_symbol, const std::string &data_separator) | bpp::PopgenlibIO | |
| read(std::istream &is, DataSet &data_set) | bpp::PopgenlibIO | virtual |
| read(const std::string &path, DataSet &data_set) | bpp::PopgenlibIO | virtual |
| read(std::istream &is) | bpp::PopgenlibIO | virtual |
| read(const std::string &path) | bpp::PopgenlibIO | virtual |
| SEMICOLON | bpp::PopgenlibIO | static |
| setDataSeparator(const std::string &data_separator) | bpp::PopgenlibIO | |
| setMissingDataSymbol(const std::string &missing_data_symbol) | bpp::PopgenlibIO | |
| TAB | bpp::PopgenlibIO | static |
| UNKNOWN | bpp::PopgenlibIO | static |
| WHITESPACE | bpp::PopgenlibIO | static |
| write(std::ostream &os, const DataSet &data_set) const | bpp::PopgenlibIO | virtual |
| write(const std::string &path, const DataSet &data_set, bool overwrite) const | bpp::PopgenlibIO | virtual |
| ~AbstractIDataSet() | bpp::AbstractIDataSet | virtual |
| ~AbstractODataSet() | bpp::AbstractODataSet | virtual |
| ~IDataSet() | bpp::IDataSet | inlinevirtual |
| ~ODataSet() | bpp::ODataSet | inlinevirtual |
| ~PopgenlibIO() | bpp::PopgenlibIO |