bpp-seq-omics
2.2.0
bpp::FeatureExtractor Member List
This is the complete list of members for
bpp::FeatureExtractor
, including all inherited members.
AbstractFilterMafIterator
(MafIterator *iterator)
bpp::AbstractFilterMafIterator
inline
AbstractMafIterator
()
bpp::AbstractMafIterator
inline
addIterationListener
(IterationListener *listener)
bpp::AbstractMafIterator
inline
virtual
analyseCurrentBlock_
()
bpp::FeatureExtractor
private
virtual
blockBuffer_
bpp::FeatureExtractor
private
completeOnly_
bpp::FeatureExtractor
private
currentBlock_
bpp::AbstractFilterMafIterator
protected
FeatureExtractor
(MafIterator *iterator, const std::string &refSpecies, const SequenceFeatureSet &features, bool complete=false, bool ignoreStrand=false)
bpp::FeatureExtractor
inline
fireIterationMoveSignal_
(const MafBlock ¤tBlock)
bpp::AbstractMafIterator
protected
virtual
fireIterationStartSignal_
()
bpp::AbstractMafIterator
protected
virtual
fireIterationStopSignal_
()
bpp::AbstractMafIterator
protected
virtual
ignoreStrand_
bpp::FeatureExtractor
private
isVerbose
() const
bpp::AbstractMafIterator
inline
virtual
iterationListeners_
bpp::AbstractMafIterator
protected
iterator_
bpp::AbstractFilterMafIterator
protected
logstream_
bpp::AbstractFilterMafIterator
protected
nextBlock
()
bpp::AbstractMafIterator
inline
virtual
ranges_
bpp::FeatureExtractor
private
refSpecies_
bpp::FeatureExtractor
private
setLogStream
(OutputStream *logstream)
bpp::AbstractFilterMafIterator
inline
setVerbose
(bool yn)
bpp::AbstractMafIterator
inline
virtual
started_
bpp::AbstractMafIterator
protected
verbose_
bpp::AbstractMafIterator
protected
~AbstractMafIterator
()
bpp::AbstractMafIterator
inline
virtual
~MafIterator
()
bpp::MafIterator
inline
virtual
Generated on Sat May 23 2020 12:00:30 for bpp-seq-omics by
1.8.14