bpp-seq
2.2.0
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This is the complete list of members for bpp::AbstractIAlignment, including all inherited members.
AbstractIAlignment() | bpp::AbstractIAlignment | inline |
appendAlignmentFromFile(const std::string &path, SiteContainer &sc) const | bpp::AbstractIAlignment | inlineprotectedvirtual |
appendAlignmentFromStream(std::istream &input, SiteContainer &sc) const =0 | bpp::AbstractIAlignment | protectedpure virtual |
getDataType() const | bpp::IOSequence | inline |
IAlignment() | bpp::IAlignment | inline |
IOSequence() | bpp::IOSequence | inline |
readAlignment(std::istream &input, SiteContainer &sc) const | bpp::AbstractIAlignment | inlinevirtual |
readAlignment(const std::string &path, SiteContainer &sc) const | bpp::AbstractIAlignment | inlinevirtual |
readAlignment(const std::string &path, const Alphabet *alpha) const | bpp::AbstractIAlignment | inlinevirtual |
readAlignment(std::istream &input, const Alphabet *alpha) const | bpp::AbstractIAlignment | inlinevirtual |
readAlignmentFromFile(const std::string &path, const Alphabet *alpha) const | bpp::AbstractIAlignment | inlineprotectedvirtual |
readAlignmentFromStream(std::istream &input, const Alphabet *alpha) const | bpp::AbstractIAlignment | inlineprotectedvirtual |
~AbstractIAlignment() | bpp::AbstractIAlignment | inlinevirtual |
~IAlignment() | bpp::IAlignment | inlinevirtual |
~IOSequence() | bpp::IOSequence | inlinevirtual |