bpp::DCSE Member List

This is the complete list of members for bpp::DCSE, including all inherited members.

AbstractIAlignment()	bpp::AbstractIAlignment	inline
appendAlignmentFromFile(const std::string &path, SiteContainer &sc) const	bpp::AbstractIAlignment	inlineprotectedvirtual
appendAlignmentFromStream(std::istream &input, SiteContainer &sc) const	bpp::DCSE	virtual
DCSE()	bpp::DCSE	inline
getDataType() const	bpp::IOSequence	inline
getFormatDescription() const	bpp::DCSE
getFormatName() const	bpp::DCSE
IAlignment()	bpp::IAlignment	inline
IOSequence()	bpp::IOSequence	inline
ISequence()	bpp::ISequence	inline
readAlignment(std::istream &input, SiteContainer &sc) const	bpp::AbstractIAlignment	inlinevirtual
readAlignment(const std::string &path, SiteContainer &sc) const	bpp::AbstractIAlignment	inlinevirtual
readAlignment(const std::string &path, const Alphabet *alpha) const	bpp::AbstractIAlignment	inlinevirtual
readAlignment(std::istream &input, const Alphabet *alpha) const	bpp::AbstractIAlignment	inlinevirtual
readAlignmentFromFile(const std::string &path, const Alphabet *alpha) const	bpp::AbstractIAlignment	inlineprotectedvirtual
readAlignmentFromStream(std::istream &input, const Alphabet *alpha) const	bpp::AbstractIAlignment	inlineprotectedvirtual
readSequences(std::istream &input, const Alphabet *alpha) const	bpp::DCSE	inlinevirtual
readSequences(const std::string &path, const Alphabet *alpha) const	bpp::DCSE	inlinevirtual
~AbstractIAlignment()	bpp::AbstractIAlignment	inlinevirtual
~DCSE()	bpp::DCSE	inlinevirtual
~IAlignment()	bpp::IAlignment	inlinevirtual
~IOSequence()	bpp::IOSequence	inlinevirtual
~ISequence()	bpp::ISequence	inlinevirtual