bpp-seq
2.2.0
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This is the complete list of members for bpp::DefaultNucleotideScore, including all inherited members.
alpha_ | bpp::DefaultNucleotideScore | private |
AlphabetIndex2() | bpp::AlphabetIndex2 | inline |
clone() const | bpp::DefaultNucleotideScore | inlinevirtual |
DefaultNucleotideScore(const NucleicAlphabet *alphabet) | bpp::DefaultNucleotideScore | |
DefaultNucleotideScore(const DefaultNucleotideScore &dns) | bpp::DefaultNucleotideScore | inline |
distanceMatrix_ | bpp::DefaultNucleotideScore | private |
getAlphabet() const | bpp::DefaultNucleotideScore | inlinevirtual |
getIndex(int state1, int state2) const | bpp::DefaultNucleotideScore | virtual |
getIndex(const std::string &state1, const std::string &state2) const | bpp::DefaultNucleotideScore | virtual |
getIndexMatrix() const | bpp::DefaultNucleotideScore | virtual |
isSymmetric() const | bpp::DefaultNucleotideScore | inlinevirtual |
operator=(const DefaultNucleotideScore &dns) | bpp::DefaultNucleotideScore | inline |
~AlphabetIndex2() | bpp::AlphabetIndex2 | inlinevirtual |
~DefaultNucleotideScore() | bpp::DefaultNucleotideScore | inlinevirtual |