bpp-seq  2.2.0
bpp::DefaultNucleotideScore Member List

This is the complete list of members for bpp::DefaultNucleotideScore, including all inherited members.

alpha_bpp::DefaultNucleotideScoreprivate
AlphabetIndex2()bpp::AlphabetIndex2inline
clone() constbpp::DefaultNucleotideScoreinlinevirtual
DefaultNucleotideScore(const NucleicAlphabet *alphabet)bpp::DefaultNucleotideScore
DefaultNucleotideScore(const DefaultNucleotideScore &dns)bpp::DefaultNucleotideScoreinline
distanceMatrix_bpp::DefaultNucleotideScoreprivate
getAlphabet() constbpp::DefaultNucleotideScoreinlinevirtual
getIndex(int state1, int state2) constbpp::DefaultNucleotideScorevirtual
getIndex(const std::string &state1, const std::string &state2) constbpp::DefaultNucleotideScorevirtual
getIndexMatrix() constbpp::DefaultNucleotideScorevirtual
isSymmetric() constbpp::DefaultNucleotideScoreinlinevirtual
operator=(const DefaultNucleotideScore &dns)bpp::DefaultNucleotideScoreinline
~AlphabetIndex2()bpp::AlphabetIndex2inlinevirtual
~DefaultNucleotideScore()bpp::DefaultNucleotideScoreinlinevirtual