bpp-seq  2.2.0
bpp::PhredPhd Member List

This is the complete list of members for bpp::PhredPhd, including all inherited members.

getDataType() constbpp::PhredPhdinline
getFormatDescription() constbpp::PhredPhdinline
getFormatName() constbpp::PhredPhdinline
IOSequenceStream()bpp::IOSequenceStreaminline
ISequenceStream()bpp::ISequenceStreaminline
nextSequence(std::istream &input, Sequence &seq) constbpp::PhredPhdvirtual
nextSequence(std::istream &input, Sequence &seq, std::vector< int > &pos) constbpp::PhredPhd
parseDNA_(std::istream &input, std::string &sequence, std::vector< int > &qual, std::vector< int > &pos) constbpp::PhredPhdprivate
parseFile_(std::istream &input, std::string &name, std::string &sequence, std::vector< int > &qual, std::vector< int > &pos) constbpp::PhredPhdprivate
PhredPhd()bpp::PhredPhdinline
~IOSequenceStream()bpp::IOSequenceStreaminlinevirtual
~ISequenceStream()bpp::ISequenceStreaminlinevirtual
~PhredPhd()bpp::PhredPhdinlinevirtual