bpp-seq
2.2.0
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This is the complete list of members for bpp::SequenceMask, including all inherited members.
afterSequenceChanged(const SymbolListEditionEvent &event) | bpp::SequenceMask | virtual |
afterSequenceDeleted(const SymbolListDeletionEvent &event) | bpp::SequenceMask | virtual |
afterSequenceInserted(const SymbolListInsertionEvent &event) | bpp::SequenceMask | virtual |
afterSequenceSubstituted(const SymbolListSubstitutionEvent &event) | bpp::SequenceMask | inlinevirtual |
beforeSequenceChanged(const SymbolListEditionEvent &event) | bpp::SequenceMask | inlinevirtual |
beforeSequenceDeleted(const SymbolListDeletionEvent &event) | bpp::SequenceMask | inlinevirtual |
beforeSequenceInserted(const SymbolListInsertionEvent &event) | bpp::SequenceMask | inlinevirtual |
beforeSequenceSubstituted(const SymbolListSubstitutionEvent &event) | bpp::SequenceMask | inlinevirtual |
clone() const | bpp::SequenceMask | inlinevirtual |
getMask() const | bpp::SequenceMask | inline |
getPartAnnotation(size_t pos, size_t len) const | bpp::SequenceMask | inlinevirtual |
getSize() const | bpp::SequenceMask | inline |
getType() const | bpp::SequenceMask | inlinevirtual |
init(const Sequence &seq) | bpp::SequenceMask | inlinevirtual |
isRemovable() const | bpp::SequenceMask | inlinevirtual |
isShared() const | bpp::SequenceMask | inlinevirtual |
isValidWith(const SequenceWithAnnotation &sequence, bool throwException=true) const | bpp::SequenceMask | inlinevirtual |
MASK | bpp::SequenceMask | static |
mask_ | bpp::SequenceMask | private |
merge(const SequenceAnnotation &anno) | bpp::SequenceMask | inlinevirtual |
operator[](size_t i) const | bpp::SequenceMask | inline |
removable_ | bpp::SequenceMask | private |
SequenceMask(size_t size=0, bool removable=true) | bpp::SequenceMask | inline |
SequenceMask(const std::vector< bool > &mask, bool removable=true) | bpp::SequenceMask | inline |
setMask(const std::vector< bool > &mask) | bpp::SequenceMask | inline |
setMask(size_t pos, bool mask) | bpp::SequenceMask | inline |
setMask(size_t pos, const std::vector< bool > &mask) | bpp::SequenceMask | inline |
~SequenceMask() | bpp::SequenceMask | inlinevirtual |
~SymbolListListener() | bpp::SymbolListListener | inlinevirtual |