bpp-seq  2.2.0
bpp::SequenceQuality Member List

This is the complete list of members for bpp::SequenceQuality, including all inherited members.

afterSequenceChanged(const SymbolListEditionEvent &event)bpp::SequenceQualityvirtual
afterSequenceDeleted(const SymbolListDeletionEvent &event)bpp::SequenceQualityvirtual
afterSequenceInserted(const SymbolListInsertionEvent &event)bpp::SequenceQualityvirtual
afterSequenceSubstituted(const SymbolListSubstitutionEvent &event)bpp::SequenceQualityinlinevirtual
beforeSequenceChanged(const SymbolListEditionEvent &event)bpp::SequenceQualityinlinevirtual
beforeSequenceDeleted(const SymbolListDeletionEvent &event)bpp::SequenceQualityinlinevirtual
beforeSequenceInserted(const SymbolListInsertionEvent &event)bpp::SequenceQualityinlinevirtual
beforeSequenceSubstituted(const SymbolListSubstitutionEvent &event)bpp::SequenceQualityinlinevirtual
clone() constbpp::SequenceQualityinlinevirtual
DEFAULT_QUALITY_VALUEbpp::SequenceQualitystatic
getPartAnnotation(size_t pos, size_t len) constbpp::SequenceQualityinlinevirtual
getScores() constbpp::SequenceQualityinline
getSize() constbpp::SequenceQualityinline
getType() constbpp::SequenceQualityinlinevirtual
init(const Sequence &seq)bpp::SequenceQualityinlinevirtual
isRemovable() constbpp::SequenceQualityinlinevirtual
isShared() constbpp::SequenceQualityinlinevirtual
isValidWith(const SequenceWithAnnotation &sequence, bool throwException=true) constbpp::SequenceQualityinlinevirtual
merge(const SequenceAnnotation &anno)bpp::SequenceQualityinlinevirtual
operator[](size_t i) constbpp::SequenceQualityinline
operator[](size_t i)bpp::SequenceQualityinline
QUALITY_SCOREbpp::SequenceQualitystatic
qualScores_bpp::SequenceQualityprivate
removable_bpp::SequenceQualityprivate
SequenceQuality(size_t size=0, bool removable=true)bpp::SequenceQualityinline
SequenceQuality(const std::vector< int > &quality, bool removable=true)bpp::SequenceQualityinline
setScore(size_t pos, int score)bpp::SequenceQualityinline
setScores(const std::vector< int > &scores)bpp::SequenceQualityinline
setScores(size_t pos, const std::vector< int > &scores)bpp::SequenceQualityinline
~SequenceQuality()bpp::SequenceQualityinlinevirtual
~SymbolListListener()bpp::SymbolListListenerinlinevirtual