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bpp-seq
2.2.0
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This is the complete list of members for bpp::SequenceQuality, including all inherited members.
| afterSequenceChanged(const SymbolListEditionEvent &event) | bpp::SequenceQuality | virtual |
| afterSequenceDeleted(const SymbolListDeletionEvent &event) | bpp::SequenceQuality | virtual |
| afterSequenceInserted(const SymbolListInsertionEvent &event) | bpp::SequenceQuality | virtual |
| afterSequenceSubstituted(const SymbolListSubstitutionEvent &event) | bpp::SequenceQuality | inlinevirtual |
| beforeSequenceChanged(const SymbolListEditionEvent &event) | bpp::SequenceQuality | inlinevirtual |
| beforeSequenceDeleted(const SymbolListDeletionEvent &event) | bpp::SequenceQuality | inlinevirtual |
| beforeSequenceInserted(const SymbolListInsertionEvent &event) | bpp::SequenceQuality | inlinevirtual |
| beforeSequenceSubstituted(const SymbolListSubstitutionEvent &event) | bpp::SequenceQuality | inlinevirtual |
| clone() const | bpp::SequenceQuality | inlinevirtual |
| DEFAULT_QUALITY_VALUE | bpp::SequenceQuality | static |
| getPartAnnotation(size_t pos, size_t len) const | bpp::SequenceQuality | inlinevirtual |
| getScores() const | bpp::SequenceQuality | inline |
| getSize() const | bpp::SequenceQuality | inline |
| getType() const | bpp::SequenceQuality | inlinevirtual |
| init(const Sequence &seq) | bpp::SequenceQuality | inlinevirtual |
| isRemovable() const | bpp::SequenceQuality | inlinevirtual |
| isShared() const | bpp::SequenceQuality | inlinevirtual |
| isValidWith(const SequenceWithAnnotation &sequence, bool throwException=true) const | bpp::SequenceQuality | inlinevirtual |
| merge(const SequenceAnnotation &anno) | bpp::SequenceQuality | inlinevirtual |
| operator[](size_t i) const | bpp::SequenceQuality | inline |
| operator[](size_t i) | bpp::SequenceQuality | inline |
| QUALITY_SCORE | bpp::SequenceQuality | static |
| qualScores_ | bpp::SequenceQuality | private |
| removable_ | bpp::SequenceQuality | private |
| SequenceQuality(size_t size=0, bool removable=true) | bpp::SequenceQuality | inline |
| SequenceQuality(const std::vector< int > &quality, bool removable=true) | bpp::SequenceQuality | inline |
| setScore(size_t pos, int score) | bpp::SequenceQuality | inline |
| setScores(const std::vector< int > &scores) | bpp::SequenceQuality | inline |
| setScores(size_t pos, const std::vector< int > &scores) | bpp::SequenceQuality | inline |
| ~SequenceQuality() | bpp::SequenceQuality | inlinevirtual |
| ~SymbolListListener() | bpp::SymbolListListener | inlinevirtual |