bpp::Site Member List

This is the complete list of members for bpp::Site, including all inherited members.

addElement(const std::string &c)	bpp::BasicSymbolList	virtual
addElement(size_t pos, const std::string &c)	bpp::BasicSymbolList	virtual
addElement(int v)	bpp::BasicSymbolList	virtual
addElement(size_t pos, int v)	bpp::BasicSymbolList	virtual
BasicSymbolList(const Alphabet *alpha)	bpp::BasicSymbolList	inline
BasicSymbolList(const std::vector< std::string > &list, const Alphabet *alpha)	bpp::BasicSymbolList
BasicSymbolList(const std::vector< int > &list, const Alphabet *alpha)	bpp::BasicSymbolList
BasicSymbolList(const SymbolList &list)	bpp::BasicSymbolList
BasicSymbolList(const BasicSymbolList &list)	bpp::BasicSymbolList
clone() const	bpp::Site	inlinevirtual
content_	bpp::BasicSymbolList	protected
deleteElement(size_t pos)	bpp::BasicSymbolList	virtual
deleteElements(size_t pos, size_t len)	bpp::BasicSymbolList	virtual
getAlphabet() const	bpp::BasicSymbolList	inlinevirtual
getChar(size_t pos) const	bpp::BasicSymbolList	virtual
getContent() const	bpp::BasicSymbolList	inlinevirtual
getPosition() const	bpp::Site	inlinevirtual
getValue(size_t pos) const	bpp::BasicSymbolList	virtual
operator=(const Site &s)	bpp::Site
bpp::BasicSymbolList::operator=(const SymbolList &list)	bpp::BasicSymbolList
bpp::BasicSymbolList::operator=(const BasicSymbolList &list)	bpp::BasicSymbolList
operator[](size_t i) const	bpp::BasicSymbolList	inlinevirtual
operator[](size_t i)	bpp::BasicSymbolList	inlinevirtual
position_	bpp::Site	private
setContent(const std::vector< int > &list)	bpp::BasicSymbolList	virtual
setContent(const std::vector< std::string > &list)	bpp::BasicSymbolList	virtual
setElement(size_t pos, const std::string &c)	bpp::BasicSymbolList	virtual
setElement(size_t pos, int v)	bpp::BasicSymbolList	virtual
setPosition(int position)	bpp::Site	inlinevirtual
shuffle()	bpp::BasicSymbolList	inlinevirtual
Site(const Alphabet *alpha)	bpp::Site
Site(const Alphabet *alpha, int position)	bpp::Site
Site(const std::vector< std::string > &site, const Alphabet *alpha)	bpp::Site
Site(const std::vector< std::string > &site, const Alphabet *alpha, int position)	bpp::Site
Site(const std::vector< int > &site, const Alphabet *alpha)	bpp::Site
Site(const std::vector< int > &site, const Alphabet *alpha, int position)	bpp::Site
Site(const Site &site)	bpp::Site
size() const	bpp::BasicSymbolList	inlinevirtual
toString() const	bpp::BasicSymbolList	virtual
~BasicSymbolList()	bpp::BasicSymbolList	inlinevirtual
~Site()	bpp::Site	inlinevirtual
~SymbolList()	bpp::SymbolList	inlinevirtual