bpp-seq  2.2.0
bpp::StringSequenceTools Member List

This is the complete list of members for bpp::StringSequenceTools, including all inherited members.

codeSequence(const std::string &sequence, const Alphabet *alphabet)bpp::StringSequenceToolsstatic
complement(const std::string &sequence)bpp::StringSequenceToolsstatic
decodeSequence(const std::vector< int > &sequence, const Alphabet *alphabet)bpp::StringSequenceToolsstatic
deleteChar(const std::string &sequence, char chars)bpp::StringSequenceToolsstatic
deleteChar(const std::string &sequence, std::string chars)bpp::StringSequenceToolsstatic
getAlphabetFromSequence(const std::string &sequence)bpp::StringSequenceToolsstatic
getGCcontent(const std::string &sequence, size_t pos, size_t window)bpp::StringSequenceToolsstatic
reverse(const std::string &sequence)bpp::StringSequenceToolsstatic
setToSizeL(const std::string &sequence, size_t size)bpp::StringSequenceToolsstatic
setToSizeR(const std::string &sequence, size_t size)bpp::StringSequenceToolsstatic
StringSequenceTools()bpp::StringSequenceToolsinline
subseq(const std::string &sequence, size_t begin, size_t end)bpp::StringSequenceToolsstatic
~StringSequenceTools()bpp::StringSequenceToolsinline