meme2alph

Usage:

meme2alph [options] <motif file> [<alphabet file>]

Description

Extract the alphabet from a MEME formatted motif file and write it out as a alphabet definition.

Input

Reads in a MEME formatted motif from the given <motif file>.

Output

Writes the extracted alphabet definition to the <alphabet file> or standard output if no file was given.

Options

Option Parameter Description Default Behaviour
General Options
-help  Display a brief help message and exit.