Package: gensoft-3seq-1.7
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 787
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-3seq-1.7_1.0_amd64.deb
Size: 428764
MD5sum: 4de6018448f8edf5fbfcf8de135eddb8
SHA1: c82ec969c5da7c3d5367c228e4e3f12033c95fb5
SHA256: efd3edcb06c06dab4d12ef2dec0ae4327ef7c8b2348167e605e2da28593920c6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a command-line program that reads in a nucleotide sequence file, in phylip or aligned fasta format, and tests all sequence triplets in the file for a mosaic recombination signal indicating that one of the three sequences (the child) is a recombinant of the other two (the parents).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-abpoa-1.2.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 696
Depends: gensoft-graphviz-2.42.3, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-abpoa-1.2.5_1.0_amd64.deb
Size: 206778
MD5sum: 9e48a1b4a65be12db2fcd8ea91521638
SHA1: c3abab276fee4af31a3300c70d51f57c640a5370
SHA256: a17848678d7042f7a6d9d33d220b9d650ef39c7150cb495ab7af733b732e40df
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: abPOA is an extended version of Partial Order Alignment (POA) that performs adaptive banded dynamic programming (DP) with an SIMD implementation. abPOA can perform multiple sequence alignment (MSA) on a set of input sequences and generate a consensus sequence by applying the heaviest bundling algorithm to the final alignment graph.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-abpoa-1.3.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 6735
Depends: zlib1g, libc6, gensoft-graphviz-2.42.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-abpoa-1.3.0_1.0_amd64.deb
Size: 739888
MD5sum: ed96ca6d6d04b584e0f816d53f617965
SHA1: 0153663a69d12e37bbc0243c9ab61876a9ed0a15
SHA256: fa81bf70b9bec6a2b04040b43d229fc2ca523d357e85777ecfa325a058f29007
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: abPOA is an extended version of Partial Order Alignment (POA) that performs adaptive banded dynamic programming (DP) with an SIMD implementation. abPOA can perform multiple sequence alignment (MSA) on a set of input sequences and generate a consensus sequence by applying the heaviest bundling algorithm to the final alignment graph.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-abricate-0.9.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 49185
Depends: gensoft-any2fasta-0.4.2, gensoft-adm-perl-5.30.1, gensoft-xz-5.2.4, gensoft-expat-2.2.9, gensoft-libiconv-1.16, libc6, gensoft-blast+-2.10.0, gensoft-libxml2-2.9.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-abricate-0.9.9_1.0_amd64.deb
Size: 11676626
MD5sum: e69d006ff79200f9732f0a0da17f334f
SHA1: 4fcef0634d2f0645b68593f5e6c9b721c192c90a
SHA256: be60c6b57f51ff01459ade34d14738b7b49adc2494ce1605f262cbec29f84e99
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Mass screening of contigs for antimicrobial resistance or virulence genes.  It comes bundled with multiple databases - Resfinder, CARD, ARG-ANNOT, NCBI BARRGD, NCBI, EcOH, PlasmidFinder and VFDB
License: unknown
Vendor: Institut Pasteur

Package: gensoft-abricate-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 59041
Depends: gensoft-any2fasta-0.4.2, gensoft-adm-perl-5.30.1, gensoft-libiconv-1.16, gensoft-libxml2-2.9.10, gensoft-xz-5.2.4, libc6, gensoft-blast+-2.10.0, gensoft-expat-2.2.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-abricate-1.0.1_1.0_amd64.deb
Size: 13112824
MD5sum: c6d595235000e75ac176f8eaefeb7461
SHA1: 9ebd98e6d9c0467d7a1f51944f47613eb47d6243
SHA256: 4043e00494fc86c7258d75782aabfcd1d65e0caf3f7300217a76d13d7c33332b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Mass screening of contigs for antimicrobial resistance or virulence genes.  It comes bundled with multiple databases - Resfinder, CARD, ARG-ANNOT, NCBI BARRGD, NCBI, EcOH, PlasmidFinder and VFDB
License: unknown
Vendor: Institut Pasteur

Package: gensoft-abundancebin-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 57
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-abundancebin-1.0.1_1.0_amd64.deb
Size: 20482
MD5sum: 8b21c599ff0e11c0be4e0bbea5b46174
SHA1: 657e2d90773a0e6a49e71fbb59fd4108afad4a76
SHA256: 9572b8ea226f065cbff7a922f63c2f2d2baae2ff9497fa872f37167244f71e6a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AbundanceBin is an abundance-based tool for binning metagenomic sequences, such that the reads classified in a bin belong to species of identical or very similar abundances. AbundanceBin also gives estimations of species abundances and their genome sizes, two important characteristic parameters for a microbial community.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-abyss-2.2.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 144988
Depends: zlib1g, gensoft-adm-perl-5.30.1, libc6, bsdmainutils, make, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5, awk
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-abyss-2.2.4_1.0_amd64.deb
Size: 39602068
MD5sum: 740efaa7d01d0af4ee53936579996102
SHA1: 028bf62f73c4169289626358110bb4eb55e38778
SHA256: 50d205623eb0558a1bf0e2450a6d91ba9f769d2f1d7249a55ed50073469d4cbd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: De novo, parallel, paired-end sequence assembler that is designed for short reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-abyss-2.2.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 144925
Depends: libc6, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, zlib1g, gensoft-openmpi-4.0.5, bsdmainutils, awk, make
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-abyss-2.2.5_1.0_amd64.deb
Size: 39587154
MD5sum: d41d5688babf106158e5bd7b90201b48
SHA1: 7e2218d4c7d995eeca0831ebf4a476dacbb8097b
SHA256: 093803a57510fc85cfe1103f4eac073c3110e2ed5f9b153ae1ed89076a1d2d03
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: De novo, parallel, paired-end sequence assembler that is designed for short reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-adapterremoval-2.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2493
Depends: libbz2-1.0, libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-adapterremoval-2.3.1_1.0_amd64.deb
Size: 849804
MD5sum: 35a2e04058b2143de71353a1c8deef29
SHA1: 06d7bc1b5f4e040c31f74dd3d6edc989bb891932
SHA256: cba0eb2ce41d5441781a99a66950426482e0082903939a8365fb225dd5340eab
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AdapterRemoval searches for and removes adapter sequences from High-Throughput Sequencing (HTS) data and (optionally) trims low quality bases from the 3 prime end of reads following adapter removal. AdapterRemoval can analyze both single end and paired end data, and can be used to merge overlapping paired-ended reads into (longer) consensus sequences. Additionally, AdapterRemoval can construct a consensus adapter sequence for paired-ended reads, if which this information is not available
License: unknown
Vendor: Institut Pasteur

Package: gensoft-adm-perl-5.30.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 71776
Depends: gensoft-db-18.1.32, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-adm-perl-5.30.1_1.0_amd64.deb
Size: 18688530
MD5sum: 7f2e6e5c31e6f3251135cc3bdd17f912
SHA1: da51b39cac874c1b70dda0822e98c43357e46a70
SHA256: f8d64bf29f3daadd00d5210d411884774cba22a9b0daf595a2c992e3d179ae89
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Perl 5 is a highly capable, feature-rich programming language with over 27 years of development
License: unknown
Vendor: Institut Pasteur

Package: gensoft-adm-python-2.7.17
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 133218
Depends: libc6, libreadline8, gensoft-xorg-libs-1.1, gensoft-tk-8.6.10, libbz2-1.0, libssl1.1, libtinfo5, gensoft-sqlite-3.31.0, gensoft-tcl-8.6.10, gensoft-gdbm-1.18.1, gensoft-gcc-9.2.0, zlib1g, libncurses5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-adm-python-2.7.17_1.0_amd64.deb
Size: 40627484
MD5sum: a4bed03eaef619763ded4e00e283b68d
SHA1: c5fe93350b2ced822371b3368fe544a56893d5d8
SHA256: e1bf341266d7c4e61e8550fe2d231496a44a54209cd03d0ab12243ff743e5f0b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-adm-python-3.10.7
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 223481
Depends: gensoft-tcl-8.6.10, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-xorg-libs-1.1, gensoft-sqlite-3.31.0, libc6, libncursesw6, gensoft-gdbm-1.18.1, libtinfo6, gensoft-libffi-3.3, gensoft-xz-5.2.5, libcrypt1, libssl1.1, gensoft-tk-8.6.10, libreadline8, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-adm-python-3.10.7_1.0_amd64.deb
Size: 69884220
MD5sum: 04fd256bef24bbdf5b3b300016d48930
SHA1: fc2c7ccc610bb290c93fe30b8720c09745877ba8
SHA256: 298f5c28b638c54cf6e76c0bc601ecd013e234391d47c5d6e2fe9f6bd99762bc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-adm-python-3.6.15
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 170559
Depends: libc6, gensoft-tk-8.6.10, libtinfo5, libssl1.1, libncurses5, gensoft-tcl-8.6.10, libreadline8, zlib1g, gensoft-gdbm-1.18.1, gensoft-xorg-libs-1.1, gensoft-gcc-9.2.0, libbz2-1.0, gensoft-sqlite-3.31.0, gensoft-libffi-3.3, gensoft-xz-5.2.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-adm-python-3.6.15_1.0_amd64.deb
Size: 54414874
MD5sum: 0c543af3eb093f2bbf506f2869bc797b
SHA1: ac0403ae58bae15b4e04d5e41a5668f4e93bd1c0
SHA256: f550b326ed47d6fc28aad5e45d8c840e6e65fdf5845ed0584e529a49e3ebd1c2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-adm-python-3.7.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 180614
Depends: gensoft-sqlite-3.31.0, gensoft-gdbm-1.18.1, gensoft-tcl-8.6.10, zlib1g, libncurses5, libtinfo5, libreadline8, gensoft-gcc-9.2.0, libc6, gensoft-libffi-3.3, libbz2-1.0, libssl1.1, gensoft-xorg-libs-1.1, gensoft-tk-8.6.10, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-adm-python-3.7.6_1.0_amd64.deb
Size: 53814832
MD5sum: 154508237361f17f34656b3448dd9039
SHA1: 8847b409e892390fcc209c0288a2b62161447f13
SHA256: fd34a50cec6b241a28bf2490bb7e921a202cd403d014786d41a482b1e41cb134
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-adm-python-3.8.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 192505
Depends: gensoft-sqlite-3.31.0, libbz2-1.0, libtinfo5, gensoft-gcc-9.2.0, gensoft-xorg-libs-1.1, libreadline8, gensoft-tcl-8.6.10, libncurses5, gensoft-libffi-3.3, gensoft-tk-8.6.10, libc6, libssl1.1, gensoft-xz-5.2.4, gensoft-gdbm-1.18.1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-adm-python-3.8.1_1.0_amd64.deb
Size: 57428656
MD5sum: 31ac4397a9b27d9ff1819ca86e65b04d
SHA1: 1138fae7f084363a482d46b3e4cdde72414003e9
SHA256: bb5b109a429b8074a4b12b109d95ae60e0dffd70104671cd9c844b7350f74903
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-admixtools-6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12112
Depends: gensoft-adm-perl-5.30.1, gensoft-openblas-0.3.7, libc6, gensoft-r-3.6.2, gensoft-gcc-9.2.0, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-admixtools-6.0_1.0_amd64.deb
Size: 5544424
MD5sum: 6b096deb9af87efd985b94ccfc882790
SHA1: 07cfdfe573e3b8e483c33aad7f97e5a11540b9d3
SHA256: aa017b99abd4f1690eda593cee5414b336c3e522c96dd701cef7186b5679f31b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software package that supports formal tests of whether admixture occurred, and makes it possible to infer admixture proportions and dates.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-afni-21.1.08
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2606955
Depends: gensoft-motif-2.3.8, gensoft-gcc-9.2.0, gensoft-libxml2-2.9.10, gensoft-fontconfig-2.13.91, libbz2-1.0, gensoft-xz-5.2.4, libgcc-s1, gensoft-curl-7.68.0, gensoft-gsl-2.6, gensoft-glib-2.58.3, libssl1.1, gensoft-mesa-19.0.8, gensoft-libiconv-1.16, libc6, gensoft-libjpeg-turbo-2.0.4, zlib1g, gensoft-glu-9.0.1, gensoft-r-4.0.2, gensoft-xorg-libs-1.1, gensoft-freetype-2.10.1, gensoft-adm-perl-5.30.1, tcsh, gensoft-expat-2.2.9, gensoft-libpng-1.6.37, libstdc++6, gensoft-libdrm-2.4.100, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-afni-21.1.08_1.0_amd64.deb
Size: 1024800438
MD5sum: dfdbc2db9c8cc193e37a0173f6cb5614
SHA1: 2f3b5ef06cd6cee975310213559c2d02c4ac10db
SHA256: abd7be1504fa32eca2439fcda56ff663711ef867bdadc48f88b6a77c126b7669
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AFNI (Analysis of Functional NeuroImages) is a leading software suite of C, Python, R programs and shell scripts primarily developed for the analysis and display of multiple MRI modalities - anatomical, functional MRI (FMRI) and diffusion weighted (DW) data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alder-1.03
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 362
Depends: gensoft-lapack-3.9.0, gensoft-gcc-9.2.0, libc6, gensoft-blas-3.8.0, gensoft-fftw-3.3.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alder-1.03_1.0_amd64.deb
Size: 168352
MD5sum: 848d48fcbf5a9c3357bdac10c86c18a0
SHA1: 6f4cf5ec497ced15db459d1cd91bac0f8d1ef2ec
SHA256: 9246031267abca541b01fd792a78a2526594a1ec069969e344c60bfb5cf64c46
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ALDER computes weighted LD decay curves, performs curve-fitting to infer admixture dates, and uses the results to test for admixture.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ale-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 876285
Depends: gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ale-1.0_1.0_amd64.deb
Size: 232713638
MD5sum: 737a4a5f64a9b7f81f9d109df2fff5b3
SHA1: 4e1bb7bf08a21254e9a6bdae3439a1492dc7de2c
SHA256: 5ec49b1882dfb1434dcd7490af7bfca6db8d71a34225331ed308d63c80949fa2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Amalgamated likelihood estimation (ALE) is a probabilistic approach to exhaustively explore all reconciled gene trees that can be amalgamated as a combination of clades observed in a sample of gene trees.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-aliendiscover-0.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1060623
Depends: gensoft-graalvm-ce-java19-22.3.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-aliendiscover-0.1_1.0_amd64.deb
Size: 4951630
MD5sum: 42fa7883ef824e3ffd487b6fcefced30
SHA1: 16aa3411cddd286e45d87b30d4e52995a7d0768d
SHA256: 929b4348186a37a1a01c990fba612029beccb658f0acb094621bf1c0c9bdf534
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a command line program written in Java that quickly removes alien (i.e. undesirable) high-throughtput sequencing (HTS) reads from FASTQ files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alienremover-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 16
Depends: gensoft-java-13.0.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alienremover-1.0_1.0_amd64.deb
Size: 17578
MD5sum: 06ab50b2394ad64e282c6ebcb49bb0b4
SHA1: ac7b12ca6ebc5d1903ed73143589e8b5db72acc4
SHA256: 126d488b7a0bdc8be08dd8bbef532d7312600b0b4b6a8aa56635e456026c4166
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a command line program written in Java that quickly removes alien (i.e. undesirable) high-throughtput sequencing (HTS) reads from FASTQ files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alientrimmer-0.4.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4499
Depends: gensoft-graalvm-ce-java8-20.0.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alientrimmer-0.4.0_1.0_amd64.deb
Size: 1535846
MD5sum: 42785c51b7ed2ed60dce352beb79b5b2
SHA1: 05bf2a7aae6881c494ff0ecf24b5befe3f0d1bba
SHA256: be136d3e4fee1a68dcf3597bc872fbb188c0e4daa286785a5ba2fc93956cff6d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AlienTrimmer is a software that allows detecting and removing contaminant sequences in both ends of NGSread sequences FASTA/FASTQ formated.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alientrimmer-2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7122
Depends: libc6, gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alientrimmer-2.0_1.0_amd64.deb
Size: 2659668
MD5sum: d62751b991fca650a80ae8c015c48dbe
SHA1: de751334a76991b5ab98535f4e74adc79c567e30
SHA256: 6c3ca0eda9a81f6ab4159bff1d8dfcdf529ca6fb2c9b8e76c39750c5a1487ed2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AlienTrimmer is a software that allows detecting and removing contaminant sequences in both ends of NGSread sequences FASTA/FASTQ formated.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alientrimmer-2.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 12140
Depends: gensoft-graalvm-ce-java19-22.3.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alientrimmer-2.1_1.0_amd64.deb
Size: 3946750
MD5sum: 7d6b6efc0143f4aa0dd9190241090bed
SHA1: c4c298f63d39bb5f50a5e1b3767c626c49aa74ae
SHA256: 3a8fe5ba1776b30bd8966583c7b682291b9a309983b77fc48b0910839f8fb042
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AlienTrimmer is a software that allows detecting and removing contaminant sequences in both ends of NGSread sequences FASTA/FASTQ formated.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-align-reorder-1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-align-reorder-1.2_1.0_amd64.deb
Size: 3176
MD5sum: fde7130375d836ceeba7a95d0e7eeda7
SHA1: 432aeaf40f0608f1f786bedfcc1fc18f2e4c55fe
SHA256: 2b3220dcf1514ef8822e7ccbfba3a58b0700026f9a697e200f8c442326c42c43
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: reorder entries an alignement (in fasta format) according a ref sequences file (in fasta format)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alohomora-v0.36
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 160510
Depends: gensoft-merlin-1.1.2, gensoft-fontconfig-2.13.91, libc6, gensoft-xorg-libs-1.1, gensoft-freetype-2.10.1, gensoft-genehunter-2.1-r2, libbz2-1.0, zlib1g, gensoft-pedcheck-1.1, gensoft-simwalk2-2.91, gensoft-plink-1.90b6.16, gensoft-gnuplot-5.2.8, gensoft-pedstats-0.6.12, gensoft-adm-perl-5.30.1, gensoft-libpng-1.6.37, gensoft-expat-2.2.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alohomora-v0.36_1.0_amd64.deb
Size: 52819530
MD5sum: 3e17717fc3ca503cae85a958df379d9a
SHA1: 71ffe36f4cdb6e72a5b86911f94e9b39376af8ac
SHA256: c337287d4ac0ae9f4629f68369a1cb294aa470140c3c8795d4296d0355813866
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: designed to facilitate genome-wide linkage studies performed with high-density single nucleotide polymorphism (SNP) marker panels such as the Affymetrix GeneChip Human Mapping 10K Array
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alphafold-2.0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 5462315
Depends: gensoft-singularity-3.8.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alphafold-2.0.1_1.0_amd64.deb
Size: 5568617978
MD5sum: 7eb8251d0acbef140f558567b6c2bc81
SHA1: 82182fab8a9f7f558fbe08bb431f962be287dbe7
SHA256: aa3cb41b716520392fcc6059062740bfa021d34d9d25698565d5029c17e6817f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: implementation of the inference pipeline of AlphaFold 2.0.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alphafold-2.2.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5883368
Depends: gensoft-apptainer-1.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alphafold-2.2.0_1.0_amd64.deb
Size: 6010154220
MD5sum: 13be23801ccd020353b0dc2913790536
SHA1: effc40cdbf49db8e30ad4a0eef7037ad734adb43
SHA256: 0283e1fb41dd734f5d80ca073920209aa68e5d4976d4a362ec0a1ce0646ff52c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: implementation of the inference pipeline of AlphaFold 2.0.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alphafold-2.3.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5535752
Depends: gensoft-apptainer-1.1.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alphafold-2.3.0_1.0_amd64.deb
Size: 5654583910
MD5sum: a9fd225fdba7ac6999d0c7893cb66f2f
SHA1: a50a07b7cb556ab1295738f7961376009e9db3f3
SHA256: 62d1f1afac11bb073d788a38d827fc0a8e1511ccbc1fa60a06f365b24b633713
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: implementation of the inference pipeline of AlphaFold 2.0.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alphafold-2.3.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5504648
Depends: gensoft-apptainer-1.1.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alphafold-2.3.1_1.0_amd64.deb
Size: 5622919560
MD5sum: 03fd93c11745a18165dc49a2acfedadb
SHA1: 101acd43b4eb3b71b841733a64bc78d2eb6354d9
SHA256: d3ed54a481539f70df457669a26df0041b80302c161c122d0b8c4da8c73067c4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: implementation of the inference pipeline of AlphaFold 2.0.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-alsa-lib-1.2.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5825
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-alsa-lib-1.2.1.2_1.0_amd64.deb
Size: 1929976
MD5sum: c452f3711b6d404a2736a2ed37f692f1
SHA1: 4ca9b563844f93995145ab539f2a8699c741823e
SHA256: 187fed8db8edcc7032e7f3942f8c9d09a6bf5734056b223859a8ad4df602925b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Advanced Linux Sound Architecture (ALSA) provides audio and MIDI functionality to the Linux operating system.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-amap-2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 277
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-amap-2.2_1.0_amd64.deb
Size: 149812
MD5sum: 7f290498b8cec6a05202a1808b544c67
SHA1: f74c8e667ea125c22f0904a0de55c40ce625fbb7
SHA256: ece6d2cfd09dca0481063f95e940e54c7a38a9847e52e9c386c16343d4cbbfd2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AMAP is a novel algorithm for producing multiple sequence alignments.  It utilizes posterior decoding, and a novel sequence-annealing alignment, instead of the traditional progressive alignment method.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-amiga-0.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 279666
Depends: libc6, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-amiga-0.3.0_1.0_amd64.deb
Size: 90572670
MD5sum: af88d41e6a58577cfb310988d055740b
SHA1: a2dc97d6f45c061c1e041fe42eeffc0501efbda5
SHA256: a79923cd4b9578d6ca9f1b3ab30c0a6577532288c201a2460bcc9dad1241a4ee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Analysis of Microbial Growth Assays is a user-friendly program for analysis of high-throughput microbial growth assays using Gaussian Process regression.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-amos-3.1.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 384237
Depends: gensoft-blat-36, libc6, gensoft-mummer-3.23, gensoft-blast-2.2.26, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-amos-3.1.0_1.0_amd64.deb
Size: 122546596
MD5sum: a30848be9cce7bb0e50656d8fcbf7f9d
SHA1: eed9cbb4d51401cdb37b033e0a2b0942eebfebf6
SHA256: 32457960c805804d7ef393bcce9fab8cf7e3038d561478b89fc4c37bd902a882
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AMOS is collection of tools and class interfaces for the assembly of DNA sequencing reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ampliconnoise-1.29
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1332
Depends: gensoft-adm-perl-5.30.1, gensoft-openmpi-4.0.5, gensoft-gsl-2.6, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ampliconnoise-1.29_1.0_amd64.deb
Size: 612622
MD5sum: bd8dcbf66ca32ed86a9785dab17c39e3
SHA1: 824a781832d79b5b63440d6f1de1c8ad171aa700
SHA256: cdd8874636b5a457b68c9db326b98136ba448d10c557efb2369a923ba2453066
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a collection of programs for the removal of noise from 454 sequenced PCR amplicons. It involves two steps the removal of noise from the sequencing itself and the removal of PCR point errors. This project also includes the Perseus algorithm for chimera removal.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-amrfinder-3.10.24
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 4978
Depends: gensoft-gcc-9.2.0, gensoft-blast+-2.12.0, libssl1.1, zlib1g, gensoft-curl-7.68.0, gensoft-hmmer-3.3.2, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-amrfinder-3.10.24_1.0_amd64.deb
Size: 1944032
MD5sum: ca22e4c1e15f28b8d36072375ce1a8c6
SHA1: 5f9f496a2c9aac9df35fe44f4bef3b81a0049561
SHA256: 56dc5a6cf81c19ed2bd565d8de62122cb97a7b47e278a48667636a08fd5c1805
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This software and the accompanying database are designed to find acquired antimicrobial resistance genes and some point mutations in protein or assembled nucleotide sequences. We have also added plus stress, head, and biocide resistance as well as some virulence factors and E. coli antigens.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-amrfinder-3.10.30
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 5109
Depends: gensoft-blast+-2.12.0, zlib1g, libssl1.1, gensoft-gcc-9.2.0, libc6, gensoft-curl-7.68.0, gensoft-hmmer-3.3.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-amrfinder-3.10.30_1.0_amd64.deb
Size: 1986302
MD5sum: 0bca79015058c753aca6a03e8aba6af9
SHA1: 7f938969bbf98f4de1e43e62067583d816c8a6dc
SHA256: 0e61d2482921a423df25e38efb99122c4dd26925e907a013498df9e46ae8d0c6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This software and the accompanying database are designed to find acquired antimicrobial resistance genes and some point mutations in protein or assembled nucleotide sequences. We have also added plus stress, head, and biocide resistance as well as some virulence factors and E. coli antigens.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-amrfinder-3.10.40
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 5276
Depends: gensoft-blast+-2.12.0, zlib1g, libssl1.1, libc6, gensoft-curl-7.68.0, gensoft-gcc-9.2.0, gensoft-hmmer-3.3.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-amrfinder-3.10.40_1.0_amd64.deb
Size: 2054722
MD5sum: d0467a8d334e225b06609d50ee2b6b9a
SHA1: fdccb29532085c824545290e4261b3d750864f94
SHA256: e4ff4b7427c4a6f543d6063f666ece01b7269c3e9250c08e2a5f3d0e03ad7dc1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This software and the accompanying database are designed to find acquired antimicrobial resistance genes and some point mutations in protein or assembled nucleotide sequences. We have also added plus stress, head, and biocide resistance as well as some virulence factors and E. coli antigens.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-amrfinder-3.11.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 4906
Depends: gensoft-curl-7.68.0, libssl1.1, libc6, gensoft-gcc-9.2.0, gensoft-blast+-2.13.0, zlib1g, gensoft-hmmer-3.3.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-amrfinder-3.11.2_1.0_amd64.deb
Size: 1905012
MD5sum: b0a676f449e58ed10e21d8ad4a06fca3
SHA1: b49950dd23e49cc20251bfd77d82507f44b0b0e4
SHA256: 5af0e74aa1342497ba62c578e715a38cc1e9e23a63f30e5d34ae2c8f696f241b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This software and the accompanying database are designed to find acquired antimicrobial resistance genes and some point mutations in protein or assembled nucleotide sequences. We have also added plus stress, head, and biocide resistance as well as some virulence factors and E. coli antigens.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-anaquin-3.17.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 151999
Depends: libc6, zlib1g, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-anaquin-3.17.7_1.0_amd64.deb
Size: 37991250
MD5sum: 0dee35f4e834980dd27d80df19d6577b
SHA1: f8cadc2ee8611991d5c4adca5b651c4d79efa0f4
SHA256: 0c50d8e9618d727afffc7999cc80ccbf510a608aeece214c8cbb911197c55d34
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Anaquin is a command-line software toollkit used to analyse sequins. Anaquin includes tools to partition sequin-derived reads from a library (split), calibrate sequin alignment coverage t (calibrate), calculate diagnostic statistics and generate reports (germline and somatic).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-anarci-1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12006
Depends: gensoft-adm-python-2.7.17, gensoft-hmmer-3.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-anarci-1.3_1.0_amd64.deb
Size: 3478034
MD5sum: 1be06dc5d14df6a3020fdfe292982880
SHA1: a803c79306ee6c3167082d67686db208af5f9795
SHA256: 8898aadd8f07030af453cd01fd4f642d66e6f7f07a18e6d3850a1e425708a62c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for numbering amino-acid sequences of antibody and T-cell receptor variable domains.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ancestry-hmm-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 231
Depends: gensoft-armadillo-9.800.4, gensoft-adm-python-3.8.1, gensoft-atlas-3.10.2, gensoft-hdf5-1.10.6, gensoft-blas-3.8.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ancestry-hmm-1.0_1.0_amd64.deb
Size: 99502
MD5sum: cd14836ca14ed02a5625da624753f468
SHA1: 7e8a30e251b5922ca94a53484dfac8d05bf29d9a
SHA256: 6becbd59fabd9f63086482f7b5c42a3fd22b3a5923a6cf1446b6fd93c51f9856
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Estimate ancestry and admixture time using sequence data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-angsd-0.935
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1623
Depends: gensoft-htslib-1.10, gensoft-xz-5.2.4, gensoft-gcc-9.2.0, gensoft-curl-7.68.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-angsd-0.935_1.0_amd64.deb
Size: 711782
MD5sum: 931a80626b6a83d12087dcf08ae46516
SHA1: 5e52e2c5849d786e0b1800681a1ccefb27292059
SHA256: cb3950bc9788eb408cf7a988303f88c053ea16b272de4f0426c22ec3599d0684
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-anicalculator-v1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 11918
Depends: libgcc-s1, libc6, libcrypt1, gensoft-adm-perl-5.30.1, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-anicalculator-v1_1.0_amd64.deb
Size: 8071872
MD5sum: f7fb1e4d8263e6f5987cf619ca7c87e5
SHA1: 1a3554bf068de454309d0b20c6d175403444a73e
SHA256: 33cb2d9a4143ddf51e878457aee903f6ec1eb92e86c7ec021bb526e8e806365c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ann-1.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 603
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ann-1.1.2_1.0_amd64.deb
Size: 407696
MD5sum: f1e904d554c6297b960131fd06c40226
SHA1: 21833630aa129a1a340a20791472f29ca1596173
SHA256: d07d6ac58d562696e4bd8766ea03105b003f09082a8a7730c4b318a73ed3cd3f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A Library for Approximate Nearest Neighbor Searching
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ant-1.10.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 40487
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ant-1.10.7_1.0_amd64.deb
Size: 6785912
MD5sum: 6db48bf5b97bad8939d442451c372bd0
SHA1: 46dfb9c3601ec3686d75320179e2b30500129448
SHA256: 9d8e3d38dfa6757355239235a967ab4ada144df86e8962178a584e0b85b0004b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a Java based build tool. In theory it is kind of like make without makes wrinkles and with the full portability of pure java code.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-antismash-5.1.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 459094
Depends: gensoft-libpng-1.6.37, gensoft-prodigal-2.6.3.pp1, gensoft-diamond-0.9.30, gensoft-adm-python-3.8.1, gensoft-glimmerhmm-3.0.4, libpcre3, libstdc++6, gensoft-hmmer-2.3.2, gensoft-muscle-3.8.31, gensoft-gcc-9.2.0, gensoft-freetype-2.10.1, gensoft-hmmer-3.3, gensoft-graalvm-ce-java8-20.0.0, gensoft-meme-4.11.2, gensoft-blast+-2.10.0, libgcc-s1, gensoft-fasttree-2.1.11, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-antismash-5.1.1_2.0_amd64.deb
Size: 130869704
MD5sum: bed2d50e61350f0f1dd12993451db245
SHA1: 1c7b36e6085a5d74047e5694177d5af813fc2ae1
SHA256: 80b013c24b810cb3755508086b2bb868baca67ca701bcdb30afaa77efdb27212
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The antibiotics & Secondary Metabolite Analysis Shell
License: unknown
Vendor: Institut Pasteur

Package: gensoft-antismash-6.1.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 749933
Depends: gensoft-meme-4.11.2, gensoft-freetype-2.10.1, gensoft-adm-python-3.8.1, gensoft-graalvm-ce-java8-20.0.0, libgcc-s1, gensoft-hmmer-2.3.2, gensoft-blast+-2.10.0, gensoft-diamond-0.9.30, libstdc++6, gensoft-muscle-3.8.31, gensoft-gcc-9.2.0, gensoft-hmmer-3.3, gensoft-prodigal-2.6.3, libpcre3, gensoft-libpng-1.6.37, gensoft-fasttree-2.1.11, libc6, gensoft-glimmerhmm-3.0.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-antismash-6.1.0_1.0_amd64.deb
Size: 238147638
MD5sum: 1d4438154d529590b7c264b2d4fc9067
SHA1: 14fe7862d9368afcb524deea2bdc64fb7ef8a1f4
SHA256: 7cc4309ba6051b33b55c2daa54e392b409a62917939372a31095d42f19cfc539
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The antibiotics & Secondary Metabolite Analysis Shell
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ants-2.3.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2361698
Depends: gensoft-gcc-9.2.0, gensoft-r-4.0.2, libc6, gensoft-atlas-3.10.2, gensoft-lapack-3.9.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ants-2.3.5_1.0_amd64.deb
Size: 687916856
MD5sum: 7368a38a60abd2642100c5e87c740c2b
SHA1: 2fa389aa125e3f7afb470469e553b12ed4bd55c5
SHA256: 1ca77b94ebc4f33ce9ad30971022cabf40c6d827ca331553e18a3cf06921ae4e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ANTs computes high-dimensional mappings to capture the statistics of brain structure and function
License: unknown
Vendor: Institut Pasteur

Package: gensoft-anvio-7
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1305049
Depends: gensoft-mcl-14-137, gensoft-bwa-0.7.17, gensoft-libiconv-1.16, gensoft-curl-7.68.0, gensoft-libxml2-2.9.10, gensoft-bowtie2-2.3.5.1, libc6, gensoft-trnascan-se-2.0.7, gensoft-icu-65.1, gensoft-sqlite-3.31.0, gensoft-blast+-2.10.0, gensoft-gcc-9.2.0, gensoft-r-3.6.2, gensoft-samtools-1.10, gensoft-megahit-1.2.9, gensoft-adm-python-3.8.1, gensoft-diamond-2.0.4, gensoft-spades-3.15.0, gensoft-muscle-3.8.31, gensoft-hmmer-3.2.1, gensoft-centrifuge-1.0.4-beta, gensoft-trimal-1.4.1, gensoft-fasttree-2.1.11, gensoft-prodigal-2.6.3.pp1, gensoft-iq-tree-2.0.6, gensoft-xz-5.2.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-anvio-7_2.0_amd64.deb
Size: 523547448
MD5sum: b88120b340d4d155e7650714ce026cf5
SHA1: 43602942dd49878148b15b4f6a801ac70d91858e
SHA256: 41ca20cf249e0422c83710b742dd97c82eac73914271367314e1569e91d157fa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Anvio is an open-source, community-driven analysis and visualization platform for microbial omics. It brings together many aspects of todays cutting-edge strategies including genomics, metagenomics, metatranscriptomics, pangenomics, metapangenomics, phylogenomics, and microbial population genetics in an integrated and easy-to-use fashion through extensive interactive visualization capabilities.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-any2fasta-0.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-any2fasta-0.4.2_1.0_amd64.deb
Size: 4464
MD5sum: ea57a5f38f5f0653d52f8337e8209ffc
SHA1: 74c7b83e17b923f1e88bc982e3c8c18a391c8513
SHA256: df15dbf1f8ec3c0b992318be1cce4b2b067516b6bd501b5ff217085ce1670383
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Convert various sequence formats to FASTA
License: unknown
Vendor: Institut Pasteur

Package: gensoft-aocc-compiler-3.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 475613
Depends: gensoft-adm-perl-5.30.1, gensoft-adm-python-3.8.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-aocc-compiler-3.0.0_1.0_amd64.deb
Size: 136711338
MD5sum: 7d5d1949726d2e8548222c74c5b42b69
SHA1: a13d4bb4fff95851ed2825ae15860f921c8aef16
SHA256: 5a0774098af09131300ae5a3ec5c29892a96d28067ca9594e2a2166252f83d50
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a high performance, production quality code generation tool. The AOCC environment provides various options to the developers while building and optimizing C, C++ and Fortran applications targeting 32-bit and 64-bit Linux platforms.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 98038
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.0.0_1.0_amd64.deb
Size: 41956486
MD5sum: e6b6a9dd7b63d26b3e29b410d864a52e
SHA1: d3ed0e983db8b80daf289fd47f424c7ddf6ce43d
SHA256: df294f5ad2d3609eaa4ab14843e4300d6f34d0cfb01df7b79efd08f00fc7a6f6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.0.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 97032
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.0.3_1.0_amd64.deb
Size: 44990894
MD5sum: fb5753675bcabca8c0ea3b311f08504c
SHA1: 2ca7108325486d67700bdd037647bf9979a7a515
SHA256: cbb4d9122cc8b917ba21ae3145ed30a081825e66c4393df857cfdbe33994eae5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 73711
Depends: libc6, gensoft-squashfs-4.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.1.0_1.0_amd64.deb
Size: 34150708
MD5sum: 0e43eda5ad579a31e9920c8314544b15
SHA1: 6fb1d4e5ac9e621e8a9d4319861d9ac9827ef805
SHA256: e1ed815d2c4c6383de78a2177c8fe937d7f61a96066f3de829502ee216f90264
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.1.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 74730
Depends: libc6, gensoft-squashfs-4.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.1.2_1.0_amd64.deb
Size: 34611092
MD5sum: 39ad101e671fffeb87b45538490f3722
SHA1: 50b9f4a06d41e67148c11da3b9eb55a6616c9478
SHA256: 1cea8e1d229cedeab625f570d7b2b1b9282eb69deb6b8260da483a0f415f3566
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.1.3
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 74735
Depends: gensoft-zstd-1.4.4, libc6, gensoft-lzo-2.10, gensoft-lz4-1.9.2, gensoft-xz-5.2.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.1.3_2.0_amd64.deb
Size: 34615178
MD5sum: 6ab0dd4671d073391da5cd94d9daed84
SHA1: 342a1efd712686d511e3fe7d9d882500d460af64
SHA256: e2a4f4edb8da96b27bdfc79dab095cf2bdd9373af241b360daa6fe29c78cfe68
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.1.4
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 75294
Depends: libfuse3-3, libseccomp2, gensoft-lz4-1.9.2, gensoft-zstd-1.4.4, fakeroot, fuse-overlayfs, gensoft-lzo-2.10, libc6, zlib1g, e2fsprogs, squashfs-tools, fuse2fs, gensoft-xz-5.2.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.1.4_2.0_amd64.deb
Size: 34837244
MD5sum: 9ec33d209ac80767ec928e64d6dfcd97
SHA1: e47f4e334f58984e350cf4e7e3461e5ede936c14
SHA256: 4c8f5917a4e63b3881443c321bf79f42e9eb40ad17446008ed61cc7bfdddbe7f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.1.5
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 75300
Depends: libc6, fuse2fs, gensoft-lz4-1.9.2, squashfs-tools, gensoft-lzo-2.10, e2fsprogs, libseccomp2, gensoft-xz-5.2.5, libfuse3-3, fuse-overlayfs, gensoft-zstd-1.4.4, fakeroot, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.1.5_1.0_amd64.deb
Size: 34842544
MD5sum: acd618aaf2fa81cc36a1037cbfd4e662
SHA1: 08ddf98df451e5682f3dc601e3709a4b0890e098
SHA256: d3e4ccc7caccb9708c1dcff5e1651589bb7367da65808a665c6f7eb960567e86
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.1.6
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 75300
Depends: libseccomp2, fuse2fs, libc6, gensoft-lzo-2.10, gensoft-lz4-1.9.2, libfuse3-3, squashfs-tools, fakeroot, fuse-overlayfs, gensoft-xz-5.2.5, gensoft-zstd-1.4.4, zlib1g, e2fsprogs
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.1.6_1.0_amd64.deb
Size: 34842414
MD5sum: bd20c88d31901bccbb765fabb72790c7
SHA1: 217e6e1a969467c33f4041d8828db6f12d754489
SHA256: e235094369500c1c65c3791f4bdbfcf2a731801f494ccbbc46d44f331a53a184
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.2.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 89162
Depends: fuse-overlayfs, gensoft-zstd-1.4.4, libfuse3-3, libseccomp2, fakeroot, gensoft-lzo-2.10, zlib1g, gensoft-lz4-1.9.2, gensoft-xz-5.2.5, squashfs-tools, fuse2fs, e2fsprogs, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.2.2_1.0_amd64.deb
Size: 41817598
MD5sum: 1c7bd2263bb9ca461a786794a65af933
SHA1: 3bcecd57b19037bc7ce6a554d6807e091c68036d
SHA256: 563a7aa170ccf4c10a73df3f122c69221b6ba02c5e2e08e785ec817e05254eb5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.2.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 89215
Depends: libseccomp2, zlib1g, gensoft-zstd-1.4.4, fuse2fs, libfuse3-3, e2fsprogs, gensoft-lz4-1.9.2, fakeroot, fuse-overlayfs, gensoft-lzo-2.10, squashfs-tools, gensoft-xz-5.2.5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.2.3_1.0_amd64.deb
Size: 41834344
MD5sum: ddb19a305750fc910ebeb87f83ec69ce
SHA1: be789033fcc4931737a639a46be5d41008ebd42c
SHA256: d73bb41d945d3f205fd1fd2fc2ddaec4930d9700fabcb4afadb389599b6cdb1e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.2.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 89214
Depends: libc6, fuse-overlayfs, gensoft-lz4-1.9.2, fuse2fs, squashfs-tools, fakeroot, gensoft-zstd-1.4.4, e2fsprogs, libfuse3-3, libseccomp2, zlib1g, gensoft-xz-5.2.5, gensoft-lzo-2.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.2.4_1.0_amd64.deb
Size: 41834354
MD5sum: 72f5a91a3231c327b2715589fd01e64e
SHA1: b6e13b10980365a163228e2eda1965a797bd70a8
SHA256: 666a5dc0d07083745236abdb7f0c7c8738b0250169df1d1d38bebda183f9eeb9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-apptainer-1.2.5
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 89223
Depends: gensoft-zstd-1.4.4, zlib1g, gensoft-xz-5.2.5, fakeroot, e2fsprogs, libseccomp2, libc6, fuse-overlayfs, squashfs-tools, libfuse3-3, gensoft-lz4-1.9.2, fuse2fs, gensoft-lzo-2.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-apptainer-1.2.5_1.0_amd64.deb
Size: 41838014
MD5sum: 5ab1983421cf5fd7c4adb4a8b7f0d743
SHA1: bf196fc268f2af2c89abe11d44b4be8c1e6ec9ed
SHA256: 4f3b4a07fba4a562856492f36861861819b3310c834bfaae1682f981a4c79b70
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-aragorn-1.2.38
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 442
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-aragorn-1.2.38_1.0_amd64.deb
Size: 132574
MD5sum: 46d71916e3832bf9ecc7c4414e134689
SHA1: 76794243b681981a0e0731f07e6f6049d85dc11d
SHA256: a284323016cd4560ecdfcb9a643e8febc8150e8a89bb36eed116e759f9747c31
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program to detect tRNA genes and tmRNA genes in nucleotide sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-aragorn-1.2.41
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 462
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-aragorn-1.2.41_1.0_amd64.deb
Size: 135000
MD5sum: 8e8f09bdde7144c48a1b97e5a1e9f122
SHA1: 0d1bd9463dfb666ad2eda30af1b55ed1683ee176
SHA256: 666b35f37e068cddb444cc423378c9e01779543967755b8a76529a412a0ad21b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program to detect tRNA genes and tmRNA genes in nucleotide sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-arcs-1.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8451
Depends: gensoft-samtools-1.10, gensoft-sra-sdk-2.10.2, gensoft-xz-5.2.4, gensoft-jellyfish-2.3.0, gensoft-abyss-2.2.5, gensoft-gcc-8.4.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-arcs-1.1.1_1.0_amd64.deb
Size: 2004712
MD5sum: c44a5504ded579e3076a4d1ca2503468
SHA1: e1fb9e325502937cc5a73b2a66e90047dcd619c4
SHA256: 245dd172b2cc0ab95754a61e6ec0450b2b6f9008cb3ce9afe4cf605fc2b02d89
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Scaffold genome sequence assemblies using linked read sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-aretomo-1.3.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5425
Depends: gensoft-cuda-11.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-aretomo-1.3.4_1.0_amd64.deb
Size: 2185134
MD5sum: 2acefcf68bdb90b04ccfbc4f72fee58d
SHA1: 38056bb778b1d7c552d0fdb528244d426eb2d042
SHA256: 79368bb1be16c8d06f1b4035aa01cdca1cd06abe85879d1490906b5f35b02255
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-argtable-2.13
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1696
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-argtable-2.13_1.0_amd64.deb
Size: 1344700
MD5sum: 4289b91ad0ffc379f0209d81ed5ad062
SHA1: e92e0feefdf32ad7f5ee10c4e84abd64e94f4025
SHA256: d19a9025b4198ffe849450da0dabe86a65ed7b55e548941e6db47de328575b9a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Argtable is an ANSI C library for parsing GNU style command line options with a minimum of fuss
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ariba-2.14.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 220666
Depends: libstdc++6, gensoft-mummer-3.23, libc6, gensoft-spades-3.15.2, libgcc-s1, gensoft-cd-hit-4.8.1, gensoft-bowtie2-2.3.5.1, zlib1g, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ariba-2.14.6_1.0_amd64.deb
Size: 64975708
MD5sum: c4140710dbcfb742c2a80f37705ab8e3
SHA1: e7197fcd42deff45c0e4222f3f1e643fc2272116
SHA256: 65c2bbaf05432187e6a64ed9c1d07ad145ee4c99c3cc0a09af6b7fecc67cd318
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool that identifies antibiotic resistance genes by running local assemblies. It can also be used for MLST calling.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-armadillo-10.8.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 5206
Depends: libc6, gensoft-gcc-9.2.0, gensoft-atlas-3.10.2, gensoft-blas-3.8.0, zlib1g, gensoft-hdf5-1.10.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-armadillo-10.8.2_1.0_amd64.deb
Size: 635854
MD5sum: de06ef708d8465961a5e2786d340119e
SHA1: ffca2bb6cdc69b1f54748e3383bf49c936f3ff55
SHA256: 33be7b713b55f4c8fbe8fbdf17cd212ef3d231e6db4d65773d6729d9209b23b1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Armadillo is a high quality linear algebra library (matrix maths) for the C++ language, aiming towards a good balance between speed and ease of use.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-armadillo-9.800.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4830
Depends: libc6, gensoft-blas-3.8.0, gensoft-gcc-9.2.0, gensoft-hdf5-1.10.6, zlib1g, gensoft-atlas-3.10.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-armadillo-9.800.4_1.0_amd64.deb
Size: 593960
MD5sum: faab1895f2d653a57e15c0d75bbad4b1
SHA1: 7cfe7ed96d30aa0b47a777d804c15978354fa698
SHA256: 0e8a12360a1c3f0f1c359603c2898fb47dd588707aa119db7446969837af348f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Armadillo is a high quality linear algebra library (matrix maths) for the C++ language, aiming towards a good balance between speed and ease of use.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-arpack-ng-3.7.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2566
Depends: gensoft-atlas-3.10.2, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-arpack-ng-3.7.0_1.0_amd64.deb
Size: 731300
MD5sum: de8cfaa9f02b2046379a8a777ae48367
SHA1: 5f109dbb35264aca29d7cef5b39c2fc192c5a8f3
SHA256: e6d1193989afbc6ef846cb4b1e2011a629f7b475df992b54b49059a1e1cbc27a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ARPACK-NG is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-art-2016-06-05
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13803
Depends: gensoft-gsl-2.6, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-art-2016-06-05_1.0_amd64.deb
Size: 4156210
MD5sum: d26f8fc40765622df4f8dc938dce881b
SHA1: e66fb1a767186fbc51d56ba022ac14a3567053a9
SHA256: cdcc2fb3f3aceedc97eca60beb49efb659f9548e17b2bdeec3ed0ab5265f57fd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ART is a set of simulation tools to generate synthetic next-generation sequencing reads. ART simulates sequencing reads by mimicking real sequencing process with empirical error models or quality profiles summarized from large recalibrated sequencing data. ART can also simulate reads using user own read error model or quality profiles. ART supports simulation of single-end, paired-end/mate-pair reads of three major commercial next-generation sequencing platforms. Illuminas Solexa, Roches 454 and Applied Biosystems SOLiD
License: unknown
Vendor: Institut Pasteur

Package: gensoft-artemis-15.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 21279
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-artemis-15.0_1.0_amd64.deb
Size: 11130776
MD5sum: 3ecc48074ffd92080aa90b89300f51ea
SHA1: 1648a3b1c1aa36f110f709c2bd36902d067afad0
SHA256: 81435de326b38dd824c5ed26df4a3e34a78abf5a79993eb071a447bf75536610
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-asciidoc-8.6.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 769
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-asciidoc-8.6.9_1.0_amd64.deb
Size: 209752
MD5sum: 5daea50f4234e85eedc5241c0ab267ce
SHA1: 8c94eedb944f7c1113f0ffec54172708b35978f4
SHA256: 491d607f23327ebe76b142dba9c5f09185f1a511c5ff0284bf60d4e61869e49b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AsciiDoc is a text document format for writing notes, documentation, articles, books, ebooks, slideshows, web pages, man pages and blogs. AsciiDoc files can be translated to many formats including HTML, PDF, EPUB, man page.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-asles-20220503
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 202798
Depends: zlib1g, libgcc-s1, gensoft-gcc-9.2.0, libstdc++6, gensoft-adm-python-2.7.17, libc6, gensoft-adm-perl-5.30.1, gensoft-gsl-2.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-asles-20220503_2.0_amd64.deb
Size: 64114908
MD5sum: 1a99aeda0ffa315a67001c964ad092db
SHA1: 6553a6484d185e5a7260391b5f6d2cb246bea7df
SHA256: 25ad99469f644a0e1e2225654e651f83dea0477c0efaf36f738165b7940d8381
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ASsembly Likelihood EStimator
License: unknown
Vendor: Institut Pasteur

Package: gensoft-assembly-likelihood-estimator-20180904
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 208310
Depends: gensoft-adm-python-2.7.17, gensoft-gsl-2.6, libgcc-s1, zlib1g, libstdc++6, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-assembly-likelihood-estimator-20180904_1.0_amd64.deb
Size: 67294780
MD5sum: e6cce74c717340850b4d6d7b7d03cf87
SHA1: 2b544e08bb11a8a663f902759e8aa82ef39d7111
SHA256: 0ed613ee10721a8737e02affcb9c6e76bc154e5498ced3827001827099e0d654
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assembly Likelihood Estimator
License: unknown
Vendor: Institut Pasteur

Package: gensoft-at-spi2-atk-2.38.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1011
Depends: gensoft-atk-2.36.0, libc6, gensoft-at-spi2-core-2.39.1, gensoft-glib-2.66.7, gensoft-xorg-libs-1.1, gensoft-libiconv-1.16, gensoft-libffi-3.3, gensoft-at-spi2-atk-2.38.0, gensoft-pcre-8.43, gensoft-dbus-1.13.12
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-at-spi2-atk-2.38.0_1.0_amd64.deb
Size: 316132
MD5sum: 2fab04be6060a36d02c449223aaf9a97
SHA1: 3c5b4b6466b956683a97ef6d05554f17c822ba4b
SHA256: 4098714552494457d68ee57692bb2e96d4ca45b01e64b9714f1e8365e9d9e8f5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Accessibility Toolkit provides the set of accessibility interfaces that are implemented by other toolkits and applications. Using the ATK interfaces, accessibility tools have full access to view and control running applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-at-spi2-core-2.39.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2262
Depends: gensoft-libiconv-1.16, gensoft-pcre-8.43, gensoft-libffi-3.3, gensoft-pcre2-10.34, zlib1g, libselinux1, libpcre2-8-0, libc6, libmount1, gensoft-glib-2.66.7, gensoft-xorg-libs-1.1, libblkid1, gensoft-dbus-1.13.12, gensoft-at-spi2-core-2.39.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-at-spi2-core-2.39.1_1.0_amd64.deb
Size: 655462
MD5sum: 9cffbf2914358a5df15c290b215b39d3
SHA1: 8bb47ace10a516fa7faa6d15128410dd31140729
SHA256: 2b0962a72e488ccc981bb6d440591940c4dff6b0c7691c697ccd821ae28f4072
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Accessibility Toolkit provides the set of accessibility interfaces that are implemented by other toolkits and applications. Using the ATK interfaces, accessibility tools have full access to view and control running applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-atac-seq-pipeline-2.1.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 22
Depends: gensoft-graalvm-ce-java11-20.0.0, gensoft-singularity-3.8.3, gensoft-caper-2.1.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-atac-seq-pipeline-2.1.0_1.0_amd64.deb
Size: 5398
MD5sum: b44be7173bc83f6c61e10f87474b9186
SHA1: 67ded0b23129b1e693eecbf77df1104599374743
SHA256: fbb89111a3fddeb4b5a2953eca99d8a53483e3aac5f92496c317f9b0673ec793
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ENCODE ATAC-seq pipeline designed for automated end-to-end quality control and processing of ATAC-seq and DNase-seq data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-atk-2.36.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2198
Depends: libc6, gensoft-libiconv-1.16, gensoft-pcre-8.43, gensoft-glib-2.66.7, gensoft-libffi-3.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-atk-2.36.0_1.0_amd64.deb
Size: 425754
MD5sum: a4e13ad776d1b369fe6483a14fa47e2f
SHA1: 3a9ebce447465e1f12dc362e21392abd2fd3c3cf
SHA256: 18a2d440fa91204de916687ff3252e22095913cd186b53150cbab86c0e7fe4dc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Accessibility Toolkit provides the set of accessibility interfaces that are implemented by other toolkits and applications. Using the ATK interfaces, accessibility tools have full access to view and control running applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-atk-2.9.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1828
Depends: gensoft-libffi-3.3, gensoft-glib-2.58.3, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-atk-2.9.4_1.0_amd64.deb
Size: 365662
MD5sum: 059eddf6a25972f5e7aece2e323a0252
SHA1: ccea1aa1dec62748997989c5091b8b9a5fcd85f7
SHA256: c61ef80c03903270f5421c759210a819f48b042cd99336b09dbba96653c1a805
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Accessibility Toolkit provides the set of accessibility interfaces that are implemented by other toolkits and applications. Using the ATK interfaces, accessibility tools have full access to view and control running applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-atlas-3.10.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 55995
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-atlas-3.10.2_1.0_amd64.deb
Size: 17558786
MD5sum: 2beeb4d8a21ebe9ab92986cde0ee3f9d
SHA1: e399d1107ca3d417a3216de0807a161906d5feee
SHA256: a21176f9ae739c7ab95af4cad09a7ef4621ae23fdcce4fd7c260872bd4bfe13d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Automatically Tuned Linear Algebra Software
License: unknown
Vendor: Institut Pasteur

Package: gensoft-atram-2.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 86961
Depends: gensoft-velvet-1.2.10, gensoft-abyss-2.2.5, gensoft-adm-python-3.8.1, gensoft-spades-3.14.1, libc6, gensoft-bwa-0.7.17, gensoft-bowtie2-2.1.0, gensoft-exonerate-2.4.0, gensoft-trinityrnaseq-2.9.1, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-atram-2.3.1_1.0_amd64.deb
Size: 25545848
MD5sum: 8970ecd4a10bc641d0f43aa06ee8b785
SHA1: 196acc155543d18eb2f3681881bc6cfeefbf1bee
SHA256: 13a8335a7c7f58253702f207fb46bcb683e5247055b726a43b3ce323f3c4c238
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: aTRAM (automated target restricted assembly method) is an iterative assembler that performs reference-guided local de novo assemblies using a variety of available methods. It is well-suited to various tasks where Next-Generation Sequence (NGS) data needs to be queried for gene sequences, such as phylogenomics.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-atropos-1.1.25
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 24569
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-atropos-1.1.25_1.0_amd64.deb
Size: 7626706
MD5sum: 08aba36a91867c99570ab04702f71e41
SHA1: e836d733b9b2e8a15643e92172270afc0d52b9de
SHA256: 0c394158ad3ee2cc8e8607743e83d446dd3a96a8bf1a0037927963a0c897ea7e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: specific, sensitive, and speedy trimming of NGS reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-attr-2.4.48
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 497
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-attr-2.4.48_1.0_amd64.deb
Size: 150608
MD5sum: 6100e9fb05ea37e170ebe8803e45fef7
SHA1: 6efa4a13ba036815fb3c3dbd1a40783f585210c9
SHA256: 1d73a8451770b86e2cae623ff76e1f6d2fd234638027dbc3d52fb0e5aacd5ed0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Commands for Manipulating Filesystem Extended Attributes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-augustus-3.3.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 446909
Depends: libncurses5, libbz2-1.0, gensoft-libbam-2.5.1, gensoft-ucsc-tools-v390, gensoft-gcc-9.2.0, gensoft-xz-5.2.4, gensoft-hal-v2.1, zlib1g, gensoft-samtools-1.10, gensoft-libbam-0.1.19, gensoft-curl-7.68.0, libc6, gensoft-adm-perl-5.30.1, libtinfo5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-augustus-3.3.3_1.0_amd64.deb
Size: 157216234
MD5sum: 7735038bce482854f55bffa28f15e6a3
SHA1: 2f083c3eab09babd004f6168f602f72104d86c7b
SHA256: 870ddacd4aeeaac2fddb18f54b1ca8a5ce9e9c0d3375583289a037b62ad35ccd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AUGUSTUS is a program that predicts genes in eukaryotic genomic sequences. It
License: unknown
Vendor: Institut Pasteur

Package: gensoft-augustus-3.4.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 478354
Depends: zlib1g, gensoft-adm-python-3.8.1, gensoft-gsl-2.6, libssl1.1, gensoft-adm-perl-5.30.1, gensoft-samtools-1.10, gensoft-zstd-1.4.4, gensoft-sqlite-3.31.0, gensoft-gcc-9.2.0, gensoft-suitesparse-5.6.0, gensoft-r-4.1.0, gensoft-blat-36, gensoft-mysql++-3.3.0, gensoft-xz-5.2.5, gensoft-libbam-2.5.1, debianutils, gensoft-hal-v2.1, gensoft-boost-1.72.0, libgcc-s1, libtinfo6, libncurses6, gensoft-mysql-client-8.0.19, libbz2-1.0, gensoft-ucsc-tools-v390, libc6, gensoft-lp-solve-5.5, liblzma5, gensoft-htslib-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-augustus-3.4.0_1.0_amd64.deb
Size: 168920502
MD5sum: 7e6816ffa457669978fcf084960373e1
SHA1: 715a18bfc2e1906fc5cb79888d9eedf9b4a60d0c
SHA256: a05fca905739b7b12a74139a6b7481a8b6f4d1a987560c75f504180c38a73871
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: AUGUSTUS is a program that predicts genes in eukaryotic genomic sequences. It
License: unknown
Vendor: Institut Pasteur

Package: gensoft-auto3dem-v4.05
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12394
Depends: libc6, gensoft-adm-python-2.7.17, gensoft-adm-perl-5.30.1, zlib1g, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-auto3dem-v4.05_1.0_amd64.deb
Size: 4296274
MD5sum: f281c06ee5ac97d455eb616163b03d42
SHA1: 9b1306337208f9f9d4f96526a0c1cd4af361250c
SHA256: 70c163ce2be7fd43583767fca424715ceae85a46219bb76d3e935a496bc42875
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a semi-automated image reconstruction system that provides all the tools to process raw micrographs acquired at an electron microscope and generate a three-dimensional reconstruction.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-autoconf-2.69
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 8486
Depends: gensoft-m4-1.4.18, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-autoconf-2.69_1.0_amd64.deb
Size: 2005770
MD5sum: d6cd3c7346f21d92ac213542093d079e
SHA1: 62f9ae548ea0ab624ccf51ab9f6ac073cabc4940
SHA256: 57264f8fb96da2c6a8c3cbbc939531090ab8765969cf596c89ca23eb9eb612d5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Autoconf is an extensible package of M4 macros that produce shell scripts to automatically configure software source code packages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-autodock-vina-1.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 28187
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-autodock-vina-1.1.2_1.0_amd64.deb
Size: 8703970
MD5sum: 817e1e311e3b2ef3b51a2c98ae2f6349
SHA1: 010d0486d8db55eef77bb75c6c5d1a9c7c27f935
SHA256: 515ecdd5e98377ca254445fb5d267703649b24868d2ce3b7b5d52279c120f7ee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: program for doing molecular docking.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-automake-1.16
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3902
Depends: gensoft-m4-1.4.18, gensoft-adm-perl-5.30.1, gensoft-autoconf-2.69
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-automake-1.16_1.0_amd64.deb
Size: 944876
MD5sum: 02be440e14289d415569a9223384c144
SHA1: 8a9d8e3c3af8126585f8bcccdbeabc98e371a773
SHA256: 8cba92fb49cf6da058d3ae228167cd90e3526ddd2fe21e6fea6dc41f1c6276ad
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Automake is a tool for automatically generating Makefile.in files compliant with the GNU Coding Standards. Automake requires the use of Autoconf
License: unknown
Vendor: Institut Pasteur

Package: gensoft-automake-1.16.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3935
Depends: gensoft-m4-1.4.18, gensoft-adm-perl-5.30.1, gensoft-autoconf-2.69
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-automake-1.16.3_1.0_amd64.deb
Size: 954602
MD5sum: 17a527fbf526e9f79453bc806b6760f9
SHA1: 261cd615ba768b1971f58b214a13cec71983f374
SHA256: 8c3e55cf7038612a5b57a3496e0d38edfbf6e9745af54df47a4f4bd28869dfe9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Automake is a tool for automatically generating Makefile.in files compliant with the GNU Coding Standards. Automake requires the use of Autoconf
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bacphlip-0.9.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 319846
Depends: gensoft-adm-python-3.8.1, gensoft-hmmer-3.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bacphlip-0.9.3_1.0_amd64.deb
Size: 93800296
MD5sum: c06615720ba881bd695e5c3c4bf62797
SHA1: 9fa9d160773531aec379b7a970915926527d2f8e
SHA256: b54cfbb6ebd9a45d0447b62d1b517f61edcc5f8e92ea88cc59e08290d1982ddc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BACPHLIP - a bacteriophage lifestyle prediction tool. The BACPHLIP software is designed to test whether a given phage genome (`.fasta` formatted) is likely to be either temperate (lysogenic) or virulent (lytic).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bactsnp-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25833
Depends: which, gensoft-java-1.8.0, zlib1g, libc6, gensoft-samtools-1.10, gensoft-art-2016-06-05, bc, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, gensoft-mummer-3.23
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bactsnp-1.1.0_1.0_amd64.deb
Size: 8636962
MD5sum: c63e927bbfa49067464ca90f1396b5cd
SHA1: 7a4035bfa9c5a14cf720c18a45423a181d28bf4d
SHA256: a3716e5db2f3cc371e3e0a927326d7c06b8a2e98e1beaa86ec29bfe64d11e8bd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BactSNP is a tool to identify SNPs among bacterial isolates. BactSNP can detect SNPs and create a simple TSV file with SNP information as well as an alignment FASTA file containing reconstructed pseudo-genomes of the target isolates in a one-step process.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bakta-1.5.0
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 95107
Depends: gensoft-infernal-1.1.4, gensoft-deepsig-1.2.5, gensoft-adm-python-3.8.1, gensoft-trnascan-se-2.0.9, gensoft-aragorn-1.2.38, gensoft-hmmer-3.3.2, gensoft-blast+-2.12.0, zlib1g, gensoft-amrfinder-3.10.40, libc6, libgcc-s1, gensoft-prodigal-2.6.3.pp1, gensoft-pilercr-1.06, gensoft-diamond-2.0.15
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bakta-1.5.0_2.0_amd64.deb
Size: 27780896
MD5sum: eb30d1ebf2232ad88930d540610c32e2
SHA1: f0b4c755b3cdea2ebb861c39eec504a8830af2a8
SHA256: dca3af81313a20bcf7c061286b5468afe8e4dfa9422ad37c07e53defd2018047
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for the rapid & standardized annotation of bacterial genomes and plasmids from both isolates and MAGs. It provides dbxref-rich and sORF-including annotations in machine-readable JSON & bioinformatics standard file formats for automatic downstream analysis.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bam-readcount-0.8.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1273
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bam-readcount-0.8.0_1.0_amd64.deb
Size: 428744
MD5sum: 8735c5ef9e3289b8c4a86e6973cc0666
SHA1: ceafc43bcbc720b3e5d9553a9ea10ce0239b8a03
SHA256: ad3ed8c5ff519ba2c8e916ae3be05bb0a99c6fd3029815a7d3f1a5101509ebc6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: generate metrics at single nucleotide positions from BAM files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bam2fastq-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 512
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bam2fastq-1.1.0_1.0_amd64.deb
Size: 192744
MD5sum: 7dab597e6cae349f7ffcce64a44d29be
SHA1: 5e1163ad5e80d10f650bf5d309bad040a260477a
SHA256: e42b472b318f92b2143211c8db6c726b223f89246bd29bb83bb29435ca2f1639
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: extract raw sequences (with qualities) from BAM format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bam2poscount-2011-12-14
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2
Depends: mawk, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bam2poscount-2011-12-14_1.0_amd64.deb
Size: 2832
MD5sum: 65df116e2a2b05f89032207d003948f5
SHA1: c9f41359bd72006798e03d99f225fc70c1bc4651
SHA256: 7aab6130bda1fbb6f50a3645eb2843a9673d0e939b3e85a73c99cebf8608d7c8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: no description provided
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bambamc-0.0.50
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1296
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bambamc-0.0.50_1.0_amd64.deb
Size: 386306
MD5sum: 52224b24412a40fdf020f69d670e48d6
SHA1: 9e69833e0ce0ee6e6f2d74234c9b57c379f29ea7
SHA256: 8ab965c9c2819b7eec2f8927efa8d9e7fbaa9372004bfa507bad356f81c42e2e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: lightweight C implementation of name collating BAM file input and BAM file output
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bamkit-0.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 39760
Depends: gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bamkit-0.0.1_1.0_amd64.deb
Size: 12065612
MD5sum: d7a33361bfe20e63ee525cd4765ea4f7
SHA1: 3839a17558448225572e18548155bbe01e94b066
SHA256: 580cf34f7e6ad19fc0ef22d89ba787b43ac251131d7c3657c31f7d51a472261b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tools for common BAM file manipulations
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bamm-1.7.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 79809
Depends: sed, gensoft-bwa-0.7.17, zlib1g, libc6, gensoft-adm-python-2.7.17, coreutils, grep, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bamm-1.7.3_1.0_amd64.deb
Size: 22102224
MD5sum: 15680df72fb04be7103f2f39c051a361
SHA1: 72804c3edf6ea5cfdd82029070802265da9ef3b8
SHA256: 9accdd7b5d03cd201415c5561ca0a9fcb56a637290aed5cdacf7205995ab61a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BamM is a c library, wrapped in python, that parses BAM files. The code is intended to provide a faster, more stable interface to parsing BAM files than PySam, but does not implement all/any of PySams features.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bamstats-1.25
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2871
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bamstats-1.25_1.0_amd64.deb
Size: 2365094
MD5sum: 9f20fba1771cd01cbc9d6833cf48bad0
SHA1: cbc0ae950fd8182988ab070d90e450a18b91633d
SHA256: 1e8e84e95cb5d5a6e13058675cd52eb27f6d433dc0619b45362aa0520eac6609
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: simple mapping statistics
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bamtools-2.5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3107
Depends: zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bamtools-2.5.1_1.0_amd64.deb
Size: 954092
MD5sum: f8e52b026a844c4860f20f5946143816
SHA1: 02b35eeeeae044203f3a6cc3a18d5cd91fc319a8
SHA256: 30597e99bd49d6643d92270903f3677243e9bd919592e1cb59baaa2fce70301f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: end-user toolkit for handling BAM files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bamtools-2.5.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3206
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bamtools-2.5.2_1.0_amd64.deb
Size: 997038
MD5sum: fd373ababbf4c65ce065a12c9269fd60
SHA1: af486eb550668ffdc677f115b50c4ec540c17c60
SHA256: 38781d23302e0712e6fe032eaab14c6da02067063deac1b11ce2ea86e883e339
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: end-user toolkit for handling BAM files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bandage-0.8.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2574
Depends: gensoft-icu-65.1, gensoft-pcre2-10.34, gensoft-glib-2.58.3, libbz2-1.0, gensoft-qt-5.12.1, gensoft-blast+-2.10.0, zlib1g, gensoft-gcc-9.2.0, gensoft-libpng-1.6.37, libc6, gensoft-harfbuzz-2.6.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bandage-0.8.1_1.0_amd64.deb
Size: 1211796
MD5sum: 33673700f628b189d7c753b32498be93
SHA1: d0b8ab9917a321c3c008d3ac304488b8fed6e9a4
SHA256: 5ddd49fa3775e8c9a82053963cc6c23a24296c8ff64ec052a2f822371c9aa0a7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
License: unknown
Vendor: Institut Pasteur

Package: gensoft-barrnap-0.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3092
Depends: gensoft-hmmer-3.3, gensoft-bedtools-2.29.2, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-barrnap-0.9_1.0_amd64.deb
Size: 697700
MD5sum: f5675fa44174ce829de44832bbadc171
SHA1: 8b972bb4f01e4ea403bc9ff3037ea477fc7754ed
SHA256: 26ad732cc62f46a6526d47d56bf314d2b75df48522bdc91dd4915c57f93d0eb1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bart-v1.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 287757
Depends: gensoft-adm-python-3.8.1, libc6, zlib1g, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bart-v1.1_1.0_amd64.deb
Size: 89960022
MD5sum: d66eb82ffade8aab06b143fa64b824c0
SHA1: 08c8f83022aacfed81ab6f055f4e48231ec88903
SHA256: 2bb5f101a495366ddc09825fce67a8a25771f045e933401c9d5233c35f067ab3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BART (Binding Analysis for Regulation of Transcription) is a bioinformatics tool for predicting functional transcription factors (TFs) that bind at genomic cis-regulatory regions to regulate gene expression in the human or mouse genomes, given a query gene set or a ChIP-seq dataset as input. BART leverages 3,485 human TF binding profiles and 3,055 mouse TF binding profiles from the public domain (collected in Cistrome Data Browser) to make the prediction.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bart-v2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 385276
Depends: libc6, libgcc-s1, gensoft-adm-python-3.8.1, libbz2-1.0, libstdc++6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bart-v2.0_1.0_amd64.deb
Size: 120186182
MD5sum: 3cc48116da1c28616803a660969ccc07
SHA1: 7d173691c879cea11abe0323fa11d2fc95efc47a
SHA256: 42ab74a01a60b1c033591dd6e132e7c7f69eb5b7b791a95adfd8af9bdb011d82
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BART (Binding Analysis for Regulation of Transcription) is a bioinformatics tool for predicting functional transcription factors (TFs) that bind at genomic cis-regulatory regions to regulate gene expression in the human or mouse genomes, given a query gene set or a ChIP-seq dataset as input. BART leverages 3,485 human TF binding profiles and 3,055 mouse TF binding profiles from the public domain (collected in Cistrome Data Browser) to make the prediction.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bax2bam-0.0.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 733
Depends: gensoft-pbcopper-1.6.0, gensoft-curl-7.68.0, gensoft-hdf5-1.10.6, gensoft-gcc-9.2.0, libbz2-1.0, libc6, zlib1g, libssl1.1, gensoft-htslib-1.10, gensoft-blasr-libcpp-5.3.4, gensoft-pbbam-1.0.7, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bax2bam-0.0.11_1.0_amd64.deb
Size: 259492
MD5sum: 989e877a6d93ddee682310e9e227bbad
SHA1: d0a11fbffc30de4982b88438c5427936033da7c0
SHA256: 0d01f0adae846d36dd0515e1242ca4ba24fa6651af74d8bdc882012568d729ec
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Convert legacy PacBio Bax.H5, Bas.H5, and Ccs.H5 files to the new PacBio BAM format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bbmap-37.78
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9591
Depends: gensoft-samtools-1.10, gensoft-bzip2-1.0.6, gensoft-graalvm-ce-java8-20.0.0, libc6, gensoft-pigz-2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bbmap-37.78_1.0_amd64.deb
Size: 4829458
MD5sum: 3de273f79b0a6403e97842c5a623e656
SHA1: 3ff422f400ebd9d6a7d592f03a03f5a452f24e5d
SHA256: 1784208bc2b6d464766f72d7b2f1e8b2c4bbc293685de4e383386600eab0221a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A short read aligner, as well as various other bioinformatic tools. BBMap - Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and tolerant of errors and numerous large indels. Very fast. BBNorm - Kmer-based error-correction and normalization tool. Dedupe - Simplifies assemblies by removing duplicate or contained subsequences that share a target percent identity. Reformat - Reformats reads between fasta/fastq/scarf/fasta+qual/sam, interleaved/paired, and ASCII-33/64, at over 500 MB/s. BBDuk - Filters, trims, or masks reads with kmer matches to an artifact/contaminant file.  ... and more
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bbmap-38.79
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 15227
Depends: gensoft-bzip2-1.0.6, gensoft-pigz-2.4, gensoft-graalvm-ce-java8-20.0.0, gensoft-samtools-1.10, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bbmap-38.79_1.0_amd64.deb
Size: 7715852
MD5sum: 21ee35c75295f7549969141fc2540fa4
SHA1: 9f86f9bdbd4751adf354849f4a1bf011ee322de9
SHA256: d4f2a46bda3f6b8530be3fd8146cbc6989d38fb6d20ccd0f27135aae5e443fa7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A short read aligner, as well as various other bioinformatic tools. BBMap - Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and tolerant of errors and numerous large indels. Very fast. BBNorm - Kmer-based error-correction and normalization tool. Dedupe - Simplifies assemblies by removing duplicate or contained subsequences that share a target percent identity. Reformat - Reformats reads between fasta/fastq/scarf/fasta+qual/sam, interleaved/paired, and ASCII-33/64, at over 500 MB/s. BBDuk - Filters, trims, or masks reads with kmer matches to an artifact/contaminant file.  ... and more
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bbmap-38.91
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 15828
Depends: gensoft-pigz-2.4, gensoft-samtools-1.10, libc6, gensoft-graalvm-ce-java8-20.0.0, gensoft-bzip2-1.0.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bbmap-38.91_1.0_amd64.deb
Size: 8045798
MD5sum: 7c10e87888da509a662800d384cfbfab
SHA1: 59407f431dc2c40ff2d06e4bec5c741175e359bf
SHA256: 4fd833213907dd1fb53e3037ed2083a858467094210086c8c34bc7ae7dfdbaca
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A short read aligner, as well as various other bioinformatic tools. BBMap - Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and tolerant of errors and numerous large indels. Very fast. BBNorm - Kmer-based error-correction and normalization tool. Dedupe - Simplifies assemblies by removing duplicate or contained subsequences that share a target percent identity. Reformat - Reformats reads between fasta/fastq/scarf/fasta+qual/sam, interleaved/paired, and ASCII-33/64, at over 500 MB/s. BBDuk - Filters, trims, or masks reads with kmer matches to an artifact/contaminant file.  ... and more
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bcalm-2.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12073
Depends: libc6, gensoft-adm-python-3.8.1, gensoft-hdf5-1.8.18, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bcalm-2.2.3_1.0_amd64.deb
Size: 3380768
MD5sum: cf52620c3e1e34c771f371a02d17d23e
SHA1: 29d9d51d528e6430331e44d60cdd4d4c3badc0ea
SHA256: 9eecd0095a2dd11af9ab10d2d14c3291baacbf2ae8445e05f54c5e884f586d4a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: compacted de Bruijn graph construction in low memory
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bcl2fastq-2.20.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 113548
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bcl2fastq-2.20.0_1.0_amd64.deb
Size: 31694464
MD5sum: 30182664ba68ef17f34553e0316941ae
SHA1: dfd491057b4b041e5282d8dc0d92f0901447a522
SHA256: a5c64b30e5a9c4c89bb659a83b7d05e37be40265eeac83195c8a8bb3de1c4e3d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool to handle bcl conversion and demultiplexing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beadarraycnv-1-0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 107
Depends: gensoft-python-2.7.17, gensoft-penncnv-2009.08.27
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beadarraycnv-1-0.3_1.0_amd64.deb
Size: 19504
MD5sum: 4c5d79c20c66d35525d6c07b9d59813d
SHA1: 267ceb4e08e4a3018233a85261dfde9203484b64
SHA256: 20cae3f51d2db67344a5c1146bc77ca7fb1fb71a01cfe4846491522b1f23b458
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: no description provided yet
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beagle-5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2347
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beagle-5.1_1.0_amd64.deb
Size: 2194572
MD5sum: b40bd7fa5d91d4141938e85a57240dce
SHA1: 84407c4b5f3f40b52376dcd0bec58a04d21a1457
SHA256: 6af8fcd46b0492fdce75d6de23a5ee39cf7eca4a8734f11db6aedb87ae6a6690
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a state of the art software package for analysis of large-scale genetic data sets with hundreds of thousands of markers genotyped on thousands of samples.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beagle-lib-3.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10159
Depends: gensoft-gcc-9.2.0, libc6, gensoft-cuda-11.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beagle-lib-3.1.2_1.0_amd64.deb
Size: 1839844
MD5sum: 1086a0ab493d35f392c10f80f16e8508
SHA1: 6cff2def199302ecd6d3761bcda12fa4ec232bb5
SHA256: 724240c6981c3fbb09d4b60d9b99eb2ae4a4eac274b11ba1e3b94fb85063e838
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beagle-lib-3.1.2-k40
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 10179
Depends: gensoft-cuda-11.1, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beagle-lib-3.1.2-k40_1.0_amd64.deb
Size: 1842714
MD5sum: fc59e2c42ede38a878340f64814bbf9b
SHA1: a772f12308cdf705982601ff72375c148f335f33
SHA256: 45a4864dbe8bffaa54e3d78a5eab9e9d2e253995d2b1e91c1529758a8cfa5975
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beam-na
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 526
Depends: gensoft-gcc-9.2.0, libc6, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beam-na_1.0_amd64.deb
Size: 143688
MD5sum: 84c335721b341df87ae01eef154dcdb9
SHA1: 095501d929e2aa2bb55d91b2e90715af8b940b5d
SHA256: e6e0a5ea1291eb23339926b3efb1d77f21f6d65dbb74348ab184ecc63b0c32e2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bayesian Epistatis Association Mapping
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beast-mcmc-1.10.5-23570d1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 18663
Depends: gensoft-graalvm-ce-java8-20.0.0, libc6, gensoft-beagle-lib-3.1.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beast-mcmc-1.10.5-23570d1_1.0_amd64.deb
Size: 17251162
MD5sum: 3a3f5ac79b4a7e319462b85ab287f17a
SHA1: 36e38ce139120268b5d3014562e66115c386936d
SHA256: dfb5bf73ccabd557d36e13e7e123bc9a1694e48c929c10b7dd15fd3980e61832
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAST uses MCMC to average over tree space, so that each tree is weighted proportional to its posterior probability.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beast-mcmc-1.10.5pre-thorney-v0.1.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 18994
Depends: gensoft-graalvm-ce-java8-20.0.0, libc6, gensoft-beagle-lib-3.1.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beast-mcmc-1.10.5pre-thorney-v0.1.2_1.0_amd64.deb
Size: 17551606
MD5sum: 3b88ef51c5ccf21d5a4d2277eb2edb3e
SHA1: 59f039d80abb8d331959d54d0237ded8f35dea35
SHA256: e967cafe38d0014241da05c45096f2f2c2c3b784e393d64ce046d3274c39501a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAST uses MCMC to average over tree space, so that each tree is weighted proportional to its posterior probability.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beast-v1.10.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30171
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-beagle-lib-3.1.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beast-v1.10.4_1.0_amd64.deb
Size: 17528080
MD5sum: 320fd8d2610e1348e58db009d31b6ae5
SHA1: c58298e055de34ecf239661813d4904fc94a4a09
SHA256: 809ebc9af02004d6a843674948a8be6113b5ed86b3035c29a6e3d2d70a2211e2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BEAST (Bayesian evolutionary analysis sampling trees) is package for evolutionary inference from molecular sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beast-v2.6.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12105
Depends: gensoft-beagle-lib-3.1.2, gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beast-v2.6.2_1.0_amd64.deb
Size: 8639554
MD5sum: edfbf2f1f505a94507072f76842abde7
SHA1: 9e7a36035301335728b8ab5678ac356bc46b287b
SHA256: 6e94a1a28350beca44768e4f8956da3eefd9d6a675db10510b5edc28b3f6cca7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BEAST (Bayesian evolutionary analysis sampling trees) is package for evolutionary inference from molecular sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beast-v2.6.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 12138
Depends: gensoft-beagle-lib-3.1.2, gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beast-v2.6.6_1.0_amd64.deb
Size: 8671062
MD5sum: 1e3d2e25855ec42f148ae3512779bcee
SHA1: 3ac86f6855cfffc7e519648e5244433d410ffe73
SHA256: 7b473d828c2ec37f96a51c20866c92830680d541972a6ef0d5767443593438db
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BEAST (Bayesian evolutionary analysis sampling trees) is package for evolutionary inference from molecular sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-beast-v2.7.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 256880
Depends: gensoft-beagle-lib-3.1.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-beast-v2.7.3_1.0_amd64.deb
Size: 94773752
MD5sum: a19dc3874700c55924b2956b92f1d00b
SHA1: 09b4c1fe4a3c773da955f81edbbfba3e3837c7e4
SHA256: b2da5714d1e1cc0ad4dac30da9a66ab19e6e4bb3ee515ffa8295cf4d54cc0457
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BEAST (Bayesian evolutionary analysis sampling trees) is package for evolutionary inference from molecular sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bedops-2.4.37
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25813
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bedops-2.4.37_1.0_amd64.deb
Size: 9552302
MD5sum: 29a537491c227c9d9173a8a1e352c6b0
SHA1: 64707ab29c7991f702fd3ebfc961a1601c11f56c
SHA256: d3cb4b38774500c9564c8d6e6fafdd621e2e87e1349ce2012cbf4b166c99deb5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a suite of tools to address common questions raised in genomic studies - mostly with regard to overlap and proximity relationships between data sets
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bedtools-2.29.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 62185
Depends: zlib1g, libc6, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bedtools-2.29.2_1.0_amd64.deb
Size: 18719356
MD5sum: 8b87feea218d933f934d1500106719cb
SHA1: 16f21f9b892a81ed6cffc43de234aea0dff63d53
SHA256: c3fa962aa0efbe004f0e3e7b23c0191d00834df639fa83f04474e7fb70385eaf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Flexible suite of utilities for comparing genomic features
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bfactor-v1.04
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 253
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bfactor-v1.04_1.0_amd64.deb
Size: 134424
MD5sum: 11a0b9491b4f75230af6277878730309
SHA1: 000f6d5ff7eb90d8f3e7293f6749d55d1fc65f95
SHA256: f0e23b5858f3e992a75e3c4c5f6f756c31b1de414a64ee436c4e99dbe4578af6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: bfactor is a program for filtering 3D maps and applying B-factors
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bifrost-1.0.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 8588
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bifrost-1.0.5_1.0_amd64.deb
Size: 1995732
MD5sum: e6546d84f314eef462fab02852893e11
SHA1: f54e942db9c572f1413c8a098494454bd184dc88
SHA256: 370d598591a6c3a3362443349209de9d83a8c3a83e3ca9660bb548c9693100bc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a command-line tool for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bifrost-1.0.6.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 19650
Depends: zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bifrost-1.0.6.5_1.0_amd64.deb
Size: 5090482
MD5sum: 95d7aeffcc9223bbae8eb8ea8c711238
SHA1: 72ab9e5472b924fe24d923b744460e97a95de512
SHA256: f42c13eac1b5d12ec96b58a61c3526f1f4244d1d988f9681b77dd3a1fceabed5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a command-line tool for sequencing that features a broad range of functions, such as indexing, editing, and querying the graph, and includes a graph coloring method that maps each k-mer of the graph to the genomes it occurs in.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bin2mrc-1.00
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 268
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bin2mrc-1.00_1.0_amd64.deb
Size: 18542
MD5sum: c83e0b7ae05766f2d9d1ec89fbe59e2f
SHA1: 4ef6cffecebfee0240a6287655e000c6012a458b
SHA256: 2ed5cdd18ccb7e28c018d0b3d0a414d684712b120710f9ffa3a928276a4ef350
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program to convert images saved in FEI bin format into MRC/CCP4 format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-binning-0.9.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 46
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-binning-0.9.3_1.0_amd64.deb
Size: 17776
MD5sum: 799f52c231ae26f989be1f48b52ba376
SHA1: 9d841246a1171ce165a07c7bf401e1c0c3ada0a4
SHA256: 7636d4d3ad450a829413266151de1ef5495e30e83d77122d278dffcd124c1e38
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Scripts required to calculate tetramer frequencies and create input files for ESOM
License: unknown
Vendor: Institut Pasteur

Package: gensoft-binsanity-0.3.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 422348
Depends: gensoft-adm-python-3.8.1, gensoft-checkm-1.1.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-binsanity-0.3.6_1.0_amd64.deb
Size: 129443948
MD5sum: 6b10300e0fb356dfa89de52cfc099462
SHA1: c9207416d39354ef4cd4db24cd1854d50316b904
SHA256: 5b5f286345687308da85927bf688de5b34991a188ae3a671e764ac58cd5db29f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-binutils-2.33.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 90088
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-binutils-2.33.1_1.0_amd64.deb
Size: 21453814
MD5sum: 11144b4e37a23d99e337ae8ebfd86ab8
SHA1: fd47de629416310d57f565f1d3cbe50e55915c67
SHA256: 2cbb3e15b7dcc6afabf4a018ed63edb0709ad3a8217e9c753ce59166b1326406
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bioawk-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 765
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bioawk-1.0_1.0_amd64.deb
Size: 259068
MD5sum: ffa5e7b13fed3ef0eeba882f505becc8
SHA1: 9d284c5804823ab771843543529ee77a80ec89be
SHA256: 5b82679d55346bc7e119198f47c1eb15cdbf9d9ed40727bd197b83bd43fbec72
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bioawk is an extension to Brian Kernighan awk, adding the support of several common biological data formats, including optionally gziped BED, GFF, SAM, VCF, FASTA/Q and TAB-delimited formats with column names. It also adds a few built-in functions and an command line option to use TAB as the input/output delimiter. When the new functionality is not used, bioawk is intended to behave exactly the same as the original BWK awk.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-biobambam2-2.0.185
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 316924
Depends: gensoft-gmp-6.2.0, zlib1g, gensoft-libmaus2-2.0.813, gensoft-snappy-1.1.8, gensoft-curl-7.68.0, gensoft-xz-5.2.5, gensoft-xerces-c-3.2.2, libc6, libssl1.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-biobambam2-2.0.185_1.0_amd64.deb
Size: 75697780
MD5sum: 5917f957d07516af1f56e069554d5feb
SHA1: 621c6e20a4354e84c5cb4c8f469444af407f3ef0
SHA256: 1db47ccbb9681bb012e2ba5ba015ec8982116b5fddddb16a77bbd3f19777c372
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tools for early stage alignment file processing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-biobank-tools-2020-06-18
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 50949
Depends: zlib1g, libgcc-s1, libstdc++6, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-biobank-tools-2020-06-18_1.0_amd64.deb
Size: 11907412
MD5sum: 8e89b10e3ab99593c9bd388a5a4d79b1
SHA1: c495f59b914c816c165ca455f5cfdfa038fc7941
SHA256: c0f775956896c92f9e5eee38e91a335e2bf02a6ea8b4e90818763d06e5e0cecf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Biobanks utilities
License: unknown
Vendor: Institut Pasteur

Package: gensoft-biocrf-0.9
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 203
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-biocrf-0.9_1.0_amd64.deb
Size: 70972
MD5sum: 75053545e3e715a3c92a1f29e5a7c1f1
SHA1: bf49b715c3d15b984cf7310cca152cbdc6c9d5fe
SHA256: 9176010a5d52e9fae9f6672c376aaa9da82aee29aa8a32da1f13233b5c1e9a4f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: http://www.biocomp.unibo.it/savojard/biocrf.html
License: unknown
Vendor: Institut Pasteur

Package: gensoft-biofilter-2.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 22374
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-biofilter-2.4.2_1.0_amd64.deb
Size: 8898642
MD5sum: f9c4f25ba84ef3d516e2a1ee036111f2
SHA1: 0de4e4f200956d9986581e2c3c9989811d949c95
SHA256: 942e8d1da5316c9401efac5c93cf5674cc55c1d0aa08ddd8a98a3f055911d918
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software tool that provides a convenient single interface for accessing multiple publicly available human genetic data sources.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-biom-format-2.1.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 312325
Depends: libstdc++6, libgcc-s1, gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-biom-format-2.1.10_1.0_amd64.deb
Size: 95872954
MD5sum: 8c8b3cb4545e81c39462ca1e72ba0b89
SHA1: 565091627c1ff7391a05011f077a30bd87a1c360
SHA256: 71ce439c142328fee234189c6ca0d953cd7e3e68b9f1589191d9f7b9e92d178d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium supported project
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bionj-na
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 22
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bionj-na_1.0_amd64.deb
Size: 8290
MD5sum: e64067913b182d3669c22f8cdcf113ca
SHA1: 60b876500ff0850c5d1111e75fb5e0dfc01e67c4
SHA256: a96016dc8eaf00f4fc4c2e94dbd316f2363f96b9647fbbc3d15004b69d55dffa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A distance based phylogeny reconstruction algorithm, which is well suited for distances estimated from DNA or protein sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bismark-v0.22.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 19472
Depends: gensoft-adm-perl-5.30.1, gensoft-xz-5.2.4, gensoft-bowtie2-2.1.0, gensoft-libjpeg-turbo-2.0.4, libbz2-1.0, libc6, gensoft-libtiff-4.1.0, gensoft-hisat2-2.1.0, gensoft-fontconfig-2.13.91, gensoft-freetype-2.10.1, gensoft-xorg-libs-1.1, gensoft-samtools-1.10, gensoft-libpng-1.6.37, gensoft-libgd-gd-2.2.5, zlib1g, gensoft-expat-2.2.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bismark-v0.22.3_1.0_amd64.deb
Size: 5558736
MD5sum: b457071712ae279b6204194c978579aa
SHA1: 7b28e8a18abe832d7d57db739652e8515df74045
SHA256: cc7cb2d65de35d77e3d6db553b0fcbdc7d05e097df5401cf084fe80a754f0c48
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bison-3.5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4413
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bison-3.5.1_1.0_amd64.deb
Size: 1428572
MD5sum: d1cd5c9d96ca40becbe11356c85f09c9
SHA1: 7a5bf03c05d72798c47295d8800e89bff6dfb640
SHA256: 12df19fd82a4185f2d45389a8dc9ca93e7a680a8cad52c03770fd21ce2865654
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blas-3.8.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1450
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blas-3.8.0_1.0_amd64.deb
Size: 600070
MD5sum: 88a4edfb0444b9f6175088bfb3f5e4c3
SHA1: a7faad09eaedbbbbc98dd39cbfc835a143654d5b
SHA256: fc8d8c8e29bde3d7f8b8972f0686a7f648c75f08fd2ad47067985ccf8ae8c865
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The BLAS (Basic Linear Algebra Subprograms) are routines that provide standard building blocks for performing basic vector and matrix operations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blasr-5.3.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2112
Depends: gensoft-hdf5-1.10.6, libbz2-1.0, gensoft-pbbam-1.0.7, gensoft-pbcopper-1.6.0, gensoft-blasr-libcpp-5.3.4, libc6, libssl1.1, gensoft-zlib-1.2.11, gensoft-xz-5.2.4, gensoft-gcc-9.2.0, gensoft-htslib-1.10, gensoft-curl-7.68.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blasr-5.3.3_1.0_amd64.deb
Size: 778858
MD5sum: 0bf822653a820dbb05558cbbbadc4a4f
SHA1: 4b7cd0487ea9d43b7832d6c6ac6ed70433ee73ac
SHA256: 892fd5e8c35f85262459cdbbb47ae8cb2313a8dd235e277bd9c47855d6046069
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The PacBio long read aligner
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blasr-libcpp-5.3.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14722
Depends: gensoft-curl-7.68.0, gensoft-boost-1.72.0, gensoft-htslib-1.10, gensoft-xz-5.2.4, gensoft-pbcopper-1.6.0, gensoft-hdf5-1.10.6, gensoft-gcc-9.2.0, gensoft-pbbam-1.0.7
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blasr-libcpp-5.3.4_1.0_amd64.deb
Size: 4967180
MD5sum: e541b79e22277d1898895397ef2b19e2
SHA1: a50d0512b91307d4d45e76154a51f36f87975a95
SHA256: 6d270dc3a76bad0e404130391335988cb68b78fbd4e83bb63267aa72d6b2977c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for analyzing PacBio sequences. This library contains three sub-libraries, including pbdata, hdf and alignment
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blast+-2.10.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 936830
Depends: libc6, libbz2-1.0, gensoft-adm-perl-5.30.1, gensoft-adm-python-2.7.17, gensoft-adm-python-3.8.1, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blast+-2.10.0_1.0_amd64.deb
Size: 309029026
MD5sum: 334b4ece7f4f3ac33942357b98b5af36
SHA1: 47ffbe9b211082a81e3a83192471e8e2c31b37de
SHA256: e1cfc88000abb9f94bb196595c006d28ea7778fd35693b5ac08331e586b2b3cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit. The BLAST+ applications have a number of performance and feature improvements over the legacy BLAST applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blast+-2.10.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 915618
Depends: gensoft-edirect-18.2, libc6, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, zlib1g, libbz2-1.0, gensoft-adm-python-2.7.17, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blast+-2.10.1_2.0_amd64.deb
Size: 309831012
MD5sum: 29047777c8cb5d5da9a2c95988997dae
SHA1: c7274ac9e132a23aabe8f5e9cc484052d10fdbaf
SHA256: ae7052ea8a108a6f2c4c9cd4fd7340ba5a076105eb877318aa2c0165843d556f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit. The BLAST+ applications have a number of performance and feature improvements over the legacy BLAST applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blast+-2.12.0
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 944292
Depends: gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17, libc6, zlib1g, gensoft-adm-python-3.8.1, libbz2-1.0, gensoft-edirect-18.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blast+-2.12.0_2.0_amd64.deb
Size: 324298084
MD5sum: bb178f7ba156ec06cf6b89dffdd5246b
SHA1: bb7fac0cf33cfaa5343138de74f850471df95550
SHA256: 3f23ba6c043a6a7b7773facfbb34705fd27678b42c3f411b82ccbace988da146
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit. The BLAST+ applications have a number of performance and feature improvements over the legacy BLAST applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blast+-2.13.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 952816
Depends: gensoft-adm-perl-5.30.1, zlib1g, gensoft-gcc-9.2.0, gensoft-edirect-18.2, libc6, gensoft-adm-python-3.8.1, gensoft-adm-python-2.7.17, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blast+-2.13.0_1.0_amd64.deb
Size: 327560568
MD5sum: 475b9cdfa3a468599dab07b673df7284
SHA1: d158a9dd5513b4f35cec8bda9774f1e33ce6d72a
SHA256: de391ef7bc2da280db3da4a32f44d7c15a2c7cf2e5fbabe4a8b2eb3ecd3a2f49
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit. The BLAST+ applications have a number of performance and feature improvements over the legacy BLAST applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blast+-2.2.31
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 607220
Depends: gensoft-adm-python-2.7.17, zlib1g, libc6, gensoft-gcc-9.2.0, libbz2-1.0, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blast+-2.2.31_1.0_amd64.deb
Size: 202385998
MD5sum: fb189278c45732132c9dd363ec5d0533
SHA1: 14aae1c2b9db09c4f9ea672712095eb1993ffa56
SHA256: 7671d469823d7f002dfc335fde520daf89ec94186e5b1ee2442b8f4bb72773fe
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit. The BLAST+ applications have a number of performance and feature improvements over the legacy BLAST applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blast+-2.9.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 843145
Depends: gensoft-gcc-9.2.0, libc6, libbz2-1.0, zlib1g, gensoft-adm-python-2.7.17, gensoft-adm-perl-5.30.1, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blast+-2.9.0_1.0_amd64.deb
Size: 279430818
MD5sum: f5354b116ab6798e050acbf69ffa3ec6
SHA1: 6d8d54ecef686e106f529b216d0ca8f0f6904528
SHA256: 6b9967124dcfd9f0fb488fca8c611933937664ad24bedc5e5f56ba892695d61d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit. The BLAST+ applications have a number of performance and feature improvements over the legacy BLAST applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blast-2.2.26
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 257636
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blast-2.2.26_1.0_amd64.deb
Size: 96650660
MD5sum: bbb46870b21df639befcb49f9842d565
SHA1: 7833761673c1d0553e62d668a966469fe5a5b841
SHA256: a7571beb9767a333c86c7c9ad510abfa4de8f3b870239765a73da7561f3dac64
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blast2seqids-1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blast2seqids-1.4_1.0_amd64.deb
Size: 4342
MD5sum: 1fce6b8838ac53c1edf00e2ab6e1596d
SHA1: bb37d043dbd2bba964f121d35fcc2f17cc01a6fc
SHA256: d29fda7daf567dbb4f190330137d2c5427693e53f63bd94ac7af25398f22c5be
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Parse a blast2 report ( text format -m 0 ) and return a list of hits identifier in usa format. Beware the output of blast can change according of options used to index your databanks (formatdb).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blasttaxoanalysis-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13167
Depends: gensoft-fontconfig-2.13.91, gensoft-libtiff-4.1.0, gensoft-giflib-5.2.1, libc6, gensoft-expat-2.2.9, gensoft-db-5.3.28, gensoft-xz-5.2.4, gensoft-xorg-libs-1.1, gensoft-adm-python-2.7.17, gensoft-libgd-gd-2.2.5, gensoft-zlib-1.2.11, gensoft-freetype-2.10.1, gensoft-golden-3.4.1, libbz2-1.0, gensoft-libpng-1.6.37, gensoft-libjpeg-turbo-2.0.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blasttaxoanalysis-1.0_1.0_amd64.deb
Size: 3947964
MD5sum: 027c74a080e77e9fd5307added29b07b
SHA1: 1139352284a5ce57d243f7cd79cf2720a71359e2
SHA256: 34cc7745d1cbb4cbfb9ebc10d1d9927f069ca4edbe5bdeb3c642dfbec459a93e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Blast filtering with taxonomic hierarchy information for taxonomic or genomic classification
License: unknown
Vendor: Institut Pasteur

Package: gensoft-blat-36
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 16300
Depends: gensoft-gcc-9.2.0, libc6, gensoft-libpng-1.6.37, zlib1g, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-blat-36_1.0_amd64.deb
Size: 5973660
MD5sum: 5ee52e88eea7a2459bd8013082c42067
SHA1: 43ded6a45ef6f672ba8fba15ff3f83cd46a71aa5
SHA256: 4161217f3038c2f706a133c5e3ee665aceb210265f730938ee4e7023586c9d89
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: local sequence  aligner
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bless-v1p02
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 636
Depends: libbz2-1.0, gensoft-boost-1.72.0, gensoft-zstd-1.4.4, zlib1g, gensoft-pigz-2.4, gensoft-kmc-3.2.1, gensoft-gcc-9.2.0, gensoft-xz-5.2.5, libc6, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bless-v1p02_1.0_amd64.deb
Size: 222872
MD5sum: 2dc55861a63197889ba4f40b4a11c390
SHA1: 8df8174cc0bdc0900945e18f8c0e2bddc9f86093
SHA256: 7063c26970dab741e6935f1177ec4bf2a8c19c015deec87b78003320fe0ef664
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bloom-filter-based error correction solution for high-throughput sequencing reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bmge-1.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 181
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bmge-1.12_1.0_amd64.deb
Size: 176590
MD5sum: 45c6c6245c90827f5b21482f4b140448
SHA1: ff584ce7e69f652834d16dff9e1f42a7c134da6f
SHA256: c363e09f03310a092020852a58970815b05d1cfff42eb65ae21ff9175d824bb4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bmtools-3.102.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 636
Depends: gensoft-gcc-9.2.0, libc6, gensoft-srprism-2.4.24, zlib1g, gensoft-blast+-2.12.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bmtools-3.102.4_1.0_amd64.deb
Size: 238628
MD5sum: 4e2e39e65971f4a9bd80f36672e1ee06
SHA1: 18141c1394ccfadc5c98a66e0e98d5a6bae4e813
SHA256: 5c425c2af309b425892f0fa17a2b07da372345a0b4dbf09ec5734a781df91837
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: BMtool word Bitmap Manipulation tool
License: unknown
Vendor: Institut Pasteur

Package: gensoft-boost-1.54.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 138963
Depends: libbz2-1.0, libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-boost-1.54.0_1.0_amd64.deb
Size: 18618356
MD5sum: f3ec3ceffba7ce72b50f1460abb69b18
SHA1: d863f36ccca10e50fb176775cf25a78b15467365
SHA256: 3674ae3c97e398ff541f6bb1ef41f46de6105a76ab36588d47bb343debe35d07
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: free peer-reviewed portable C++ source libraries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-boost-1.56.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 140731
Depends: zlib1g, libbz2-1.0, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-boost-1.56.0_1.0_amd64.deb
Size: 19047814
MD5sum: fac759975e557b542f0e5c0576e8faf1
SHA1: 1db5fc99a5960b470532aa2b4e17c0fe871cd76b
SHA256: 0b16bb82adfbfd2cd37375b7d195fe8bb507cac01f3a33b29738b7f010043733
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: free peer-reviewed portable C++ source libraries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-boost-1.61.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 156897
Depends: libbz2-1.0, libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-boost-1.61.0_1.0_amd64.deb
Size: 21517496
MD5sum: 7e8369582830e29b43e7449fcd14e2ee
SHA1: 13376fcf88dce6cb7e757998586733fad6ba1fa6
SHA256: dfe53e094a2b1dd1ff20f4a5954fe0ce33ae01bd673d7f977281ab9b0937f3b4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: free peer-reviewed portable C++ source libraries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-boost-1.72.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 193613
Depends: gensoft-openmpi-4.0.5, gensoft-zstd-1.4.4, gensoft-icu-65.1, gensoft-xz-5.2.4, libbz2-1.0, libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-boost-1.72.0_1.0_amd64.deb
Size: 28117942
MD5sum: 29734e81e952d03e380405678e177fe2
SHA1: 850effa2914d886de185a09ef5757db9028f7cc8
SHA256: 464bfa85b0f535ccbdd7785f5edb21b5d1405a3f6a208587ea7d28b4a5d64cf2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: free peer-reviewed portable C++ source libraries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bowtie-0.12.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6911
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bowtie-0.12.7_1.0_amd64.deb
Size: 5690880
MD5sum: 2800dc156e6ae213fbaa0ef33d951164
SHA1: 1ef7283fad436b95ba44eabf2ef93854ff03e2eb
SHA256: 555ea24d94f631972e94c14ba3699118295e98c60422738eaef137165547de9b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An ultrafast, memory-efficient short read aligner
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bowtie-1.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8383
Depends: gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, libc6, gensoft-tbb-2020.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bowtie-1.2.3_1.0_amd64.deb
Size: 6278132
MD5sum: e34c0b99ad3ec7dcd39712f87e4d54c7
SHA1: 7dfb408a0736d849bac9c7cded34d0d663611714
SHA256: 0e8dfa7a48383b8e1e9dd8e62d57ecdaac44ba51dece190155f808f909313e35
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An ultrafast, memory-efficient short read aligner
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bowtie2-2.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 26029
Depends: gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bowtie2-2.1.0_1.0_amd64.deb
Size: 7487596
MD5sum: dbac564b1d2eb558632f3070f466067d
SHA1: a788099fbd6905a422f7e40d4c22137f8c247f4c
SHA256: a631aeea5a7cf53ab98f578aea247814ebce05020697a3856526a8883941070d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An ultrafast, memory-efficient short read aligner
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bowtie2-2.3.5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 60493
Depends: gensoft-adm-perl-5.30.1, gensoft-tbb-2020.1, gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bowtie2-2.3.5.1_1.0_amd64.deb
Size: 17072962
MD5sum: b22f2ae1b8217aec4af3843ecf714256
SHA1: 4f536e2721d4aca6d221c76f1e9bc575d1f2c609
SHA256: 476ca64a928512b5a988963d54ab3d964a7f3eeb3026f3c46738df76517f55a1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An ultrafast, memory-efficient short read aligner
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bowtie2-2.5.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 63972
Depends: libc6, gensoft-adm-python-2.7.17, zlib1g, gensoft-tbb-2020.1, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bowtie2-2.5.1_1.0_amd64.deb
Size: 18023384
MD5sum: a5b2fc1f0ae1c9f0395feaf9505c1214
SHA1: ffc1452972b5cb91110ed73e7799f9715943fd43
SHA256: 983a02c299cb54f377b2083cd7d8c6baaa0d4ec651af6d69f3c19d7a58161afa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An ultrafast, memory-efficient short read aligner
License: unknown
Vendor: Institut Pasteur

Package: gensoft-boxshade-3.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 108
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-boxshade-3.3.1_1.0_amd64.deb
Size: 43274
MD5sum: 59ecd5b39a691cef8009f6f4052a02cf
SHA1: 15c75b18d32992b9b2b6902bb63d3ff243d7ef36
SHA256: 7e4c93298ac1a56f8827df14eef78ee352d245aa5b1d85af0aa975e9b30667b0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program for pretty-printing multiple alignment output
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bpplib-2.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1432009
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bpplib-2.2.0_1.0_amd64.deb
Size: 259897860
MD5sum: aa78f17727ffb83b39b49e17971026ae
SHA1: 8693aeac18b6f2a34c1e86bb0bebf25d986f3e02
SHA256: ccf797cffa0a830efcd16b255f80e44a3b0b1cd94f08bf383f139cca5a0f655c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bio++ is a set of C++ libraries for Bioinformatics, including sequence analysis, phylogenetics, molecular evolution and population genetics. libraries provided are bpp-core, bpp-seq, bpp-phyl
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bppsuite-2.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 39059
Depends: gensoft-bpplib-2.2.0, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bppsuite-2.2.0_1.0_amd64.deb
Size: 9962054
MD5sum: 6f056ee8f2cc84c7adc3be82ca3d5897
SHA1: 7795a3e4b35ea79433574e77e3586292e6c0aab5
SHA256: d234028121b1a306835ceb0c106776b4942380a332403c4978813c7b3bc269f8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tolls for Non-homogeneous models of sequence evolution in the Bio++ suite of libraries and programs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bracken-2.6.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1315
Depends: gensoft-kraken-2.1.1, gensoft-adm-python-3.8.1, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bracken-2.6.2_1.0_amd64.deb
Size: 367134
MD5sum: 0751aebaf7177eabd4ca26035a2cc735
SHA1: 4fa7bd586b5be2c908b39cc0f0f40d7194c1ba0a
SHA256: 1c5dd90cd25e0f74f2d09d4e695fb3988874d83cb54faeafefa103fbe904bd1b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample
License: unknown
Vendor: Institut Pasteur

Package: gensoft-braker-2.1.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 93947
Depends: gensoft-cdbfasta-0.99, gensoft-gushr-1.0.0, gensoft-spaln-2.4.12, zlib1g, gensoft-genemark-es-4.69, gensoft-gcc-9.2.0, gensoft-augustus-3.4.0, gensoft-genomethreader-1.7.3, gensoft-blast+-2.12.0, libc6, gensoft-diamond-2.0.14, gensoft-adm-perl-5.30.1, gensoft-samtools-1.10, gensoft-makehub-1.0.6, gensoft-bamtools-2.5.2, libgcc-s1, gensoft-exonerate-2.4.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-braker-2.1.6_1.0_amd64.deb
Size: 27182606
MD5sum: 1c37a1097bec58dda4eba2be5f497606
SHA1: 05102f53d47750a977386eb6fab31f880aba57b1
SHA256: ec6871d5a2390a897c6b68db0b0a05047f4d6844363c6dc014ccc0182af78da9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-breakdancer-1.4.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3961
Depends: gensoft-samtools-1.10, gensoft-xz-5.2.4, gensoft-libjpeg-turbo-2.0.4, zlib1g, gensoft-libpng-1.6.37, libbz2-1.0, gensoft-expat-2.2.9, gensoft-xorg-libs-1.1, libc6, gensoft-freetype-2.10.1, gensoft-libtiff-4.1.0, gensoft-adm-perl-5.30.1, gensoft-libgd-gd-2.2.5, gensoft-gcc-9.2.0, gensoft-fontconfig-2.13.91
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-breakdancer-1.4.5_1.0_amd64.deb
Size: 1197110
MD5sum: 4d86e748c9b4e62bc959cdbf29c1bfaf
SHA1: 9c14cbc46efbf477fc86f9b08e53e1743538dd82
SHA256: d57df3f5558d90296405b8cc65e6729078ec403257f99590138f8723fdfb405c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: genome-wide detection of structural variants from next generation paired-end sequencing reads. BreakDancerMax predicts five types of structural variants insertions, deletions, inversions, inter- and intra-chromosomal translocations from next-generation short paired-end sequencing reads using read pairs that are mapped with unexpected separation distances or orientation.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-breseq-0.35.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 285340
Depends: gensoft-gcc-9.2.0, gensoft-bowtie2-2.3.5.1, libc6, zlib1g, gensoft-r-3.6.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-breseq-0.35.0_1.0_amd64.deb
Size: 55661334
MD5sum: a6d402e11781a141a8836fdd79a97fb3
SHA1: 822c44f56a375c3503cc981db14d4b683d9e29bf
SHA256: 4b27ea449655b3f55fc541ea46ddcd2e557a8d8709430fa3d6f564b53e9a04b2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a computational pipeline for finding mutations relative to a reference sequence in short-read DNA re-sequencing data for microbial sized genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-breseq-0.35.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 298081
Depends: gensoft-r-3.6.2, gensoft-gcc-9.2.0, gensoft-bowtie2-2.3.5.1, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-breseq-0.35.7_1.0_amd64.deb
Size: 58510126
MD5sum: b6e8cb46b06ea7b33e4829a854698278
SHA1: 9afe2c8942c01124872633f932ded18bd11e4d53
SHA256: 96b66559f2d7d5d64682424f86e5c01eb94fa8a22afe8f7416aa5646264a2702
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a computational pipeline for finding mutations relative to a reference sequence in short-read DNA re-sequencing data for microbial sized genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bsoft-2.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 206434
Depends: libc6, gensoft-xz-5.2.4, gensoft-libpng-1.6.37, gensoft-gcc-9.2.0, gensoft-libtiff-4.1.0, gensoft-libiconv-1.16, gensoft-libjpeg-turbo-2.0.4, gensoft-bsoft-2.1.0, gensoft-tk-8.6.10, zlib1g, gensoft-fftw-3.3.8, gensoft-libxml2-2.9.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bsoft-2.1.0_1.0_amd64.deb
Size: 59674080
MD5sum: 616f7b801b39ca952fae2abb1365cb4d
SHA1: 2942531e14d35d78e635a973badf8237e34d981a
SHA256: feb9f37eab49fbca6131d63761be2a2644713c710a1e2269c4c6abdcd5548b12
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a collection of programs and a platform for development of software for image and molecular processing in structural biology.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-btyper-3.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 239270
Depends: libc6, gensoft-blast+-2.10.0, gensoft-adm-python-3.8.1, gensoft-fastani-1.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-btyper-3.1.1_1.0_amd64.deb
Size: 72734586
MD5sum: 8cc4cf9e43bbb16090e6e18115249d1d
SHA1: ff2b69ade5c459fc61dfe128f47b051d626e5f77
SHA256: 7edcf2413d2723c788fdca44d5549e72d6831037f8d7a865717dc6d7a243e980
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: in silico taxonomic classification of Bacillus cereus group genomes using whole-genome sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-busco-3.0.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 9601
Depends: libc6, gensoft-hmmer-3.2.1, gensoft-augustus-3.3.3, gensoft-adm-python-3.8.1, gensoft-blast+-2.13.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-busco-3.0.2_1.0_amd64.deb
Size: 2779226
MD5sum: e08343c66f43e7e20e80c794d8d9fce5
SHA1: 020cbf08b6b388d2abaa9a94d51ca924eab5c3e7
SHA256: b599e86bdda4eefe9927c93444f984705f7f7ec1898c9ff5c64ae49676bedf1f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Provides measures for quantitative assessment of genome assembly, gene set, and transcriptome completeness based on evolutionarily informed expectations of gene content from near-universal single-copy orthologs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-busco-5.4.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 151440
Depends: libgcc-s1, gensoft-blast+-2.13.0, gensoft-metaeuk-6-a5d39d9, zlib1g, gensoft-sepp-4.5.1, libstdc++6, libc6, gensoft-augustus-3.3.3, gensoft-adm-python-3.8.1, gensoft-hmmer-3.2.1, gensoft-prodigal-2.6.3.pp1, gensoft-bbmap-38.91
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-busco-5.4.4_1.0_amd64.deb
Size: 45333362
MD5sum: 6d76d94b4e7c5d74c23c5272490a962f
SHA1: 73c1bfd593e0c47d4b6a9fd55bb52c775a6699b3
SHA256: d35a1382077f091867b0b5de21c55e1efebff3d0625f132d5f76fd1686445f03
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Provides measures for quantitative assessment of genome assembly, gene set, and transcriptome completeness based on evolutionarily informed expectations of gene content from near-universal single-copy orthologs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-busco-5.4.7
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 153124
Depends: gensoft-metaeuk-6-a5d39d9, gensoft-blast+-2.13.0, gensoft-sepp-4.5.1, zlib1g, libstdc++6, libgcc-s1, gensoft-adm-python-3.8.1, gensoft-prodigal-2.6.3.pp1, libc6, gensoft-hmmer-3.2.1, gensoft-bbmap-38.91, gensoft-augustus-3.4.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-busco-5.4.7_1.0_amd64.deb
Size: 45816536
MD5sum: ff9474bca02deee4ebce08565aeb1e87
SHA1: 65a5d6b812394f7590d0a584c7ab9ca3403af016
SHA256: e78bd292bbf46c72becc47079f29eb0072aedc25ce271809efba610d3d3f9098
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Provides measures for quantitative assessment of genome assembly, gene set, and transcriptome completeness based on evolutionarily informed expectations of gene content from near-universal single-copy orthologs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bustools-0.40.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 578
Depends: zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bustools-0.40.0_1.0_amd64.deb
Size: 247084
MD5sum: 0fdb70868bbba0999ed1372c96340958
SHA1: 228b10b669bb0188e0ffc49e4f2e56e65e25ae8d
SHA256: 82536166553475fd5909570499a7ba2b9ce1f24d97326ce0a46f218d0bb5912b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: bustools is a program for manipulating BUS files for single cell RNA-Seq datasets. It can be used to error correct barcodes, collapse UMIs, produce gene count or transcript compatbility count matrices, and is useful for many other tasks
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bwa-0.5.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 872
Depends: libc6, gensoft-adm-perl-5.30.1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bwa-0.5.9_1.0_amd64.deb
Size: 334690
MD5sum: 91392af1c713f024d777e91f9c7eb024
SHA1: 1f3342c2e24fec1450340038cee0312951bb901d
SHA256: ad6edf73e0dc2c160498ca6a2a61dfe7508483f2f8cdc04f4be03b022b3426d6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Alignment of short reads via Burrows-Wheeler transformation on a indexed reference sequence
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bwa-0.6.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 982
Depends: zlib1g, gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bwa-0.6.2_1.0_amd64.deb
Size: 382256
MD5sum: 0a9edce66d51749f2d69d31dfbc6e0c4
SHA1: 23c12157ea19af09762043c705c536d568144204
SHA256: c17700fb9aa5191ffe8ca14623090df0c6294dd60b1f2dafa7e74c5f8ee0ed40
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Alignment of short reads via Burrows-Wheeler transformation on a indexed reference sequence
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bwa-0.7.17
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2998
Depends: zlib1g, libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bwa-0.7.17_1.0_amd64.deb
Size: 1052800
MD5sum: 470d61a1a22308d45600ec1de2360fb5
SHA1: 2108ebda97502b95fe453b7e1002b33f28e6f00c
SHA256: 378a7b72240f28fcf19622db29f434dc3c36c05c19c39f9357b2eb3657071389
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Alignment of short reads via Burrows-Wheeler transformation on a indexed reference sequence
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bwa-0.7.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1198
Depends: libc6, zlib1g, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bwa-0.7.4_1.0_amd64.deb
Size: 464916
MD5sum: 2eb8c2ecb848ae040b0f4fded40f66fe
SHA1: b62c03d0e023a74c52fe7a93cb3c08dc08abb8e9
SHA256: 887efebbebef366080d1d415fcd65efe880d82766857a29a52d234ea21a4f4f0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Alignment of short reads via Burrows-Wheeler transformation on a indexed reference sequence
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bwa-mem2-2.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1807
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bwa-mem2-2.2.1_1.0_amd64.deb
Size: 670036
MD5sum: 54db550bb67672dd35bcab53b0316aa4
SHA1: fbbedcbc30db833043bd961d29488254e7d165fe
SHA256: 2c3b0c902cf9273402cb85e30077c9429acd9bf2456d7c9d3d35cf8c4c01ca49
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bwa-mem2 is the next version of the bwa-mem algorithm in bwa
License: unknown
Vendor: Institut Pasteur

Package: gensoft-bzip2-1.0.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1855
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-bzip2-1.0.6_1.0_amd64.deb
Size: 628056
MD5sum: 08e1134c9623b5b18794c6c92ffce47f
SHA1: c376257bf6bf5cccb6977d12c8c4dc78a94e93e3
SHA256: d8158755270370140ead1bd171d9a5ad3288abc7ff23ab76259b49685dfa09d3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: bzip2 is a freely available, patent free, high-quality data compressor
License: unknown
Vendor: Institut Pasteur

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Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 803
Depends: gensoft-gcc-9.2.0, gensoft-zstd-1.4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-c-blosc-1.17.1_1.0_amd64.deb
Size: 355094
MD5sum: 97c5a78ea1941b802466d7db46878714
SHA1: 1f33e6c434c24c04952932fab5d5e69e975ee1bb
SHA256: 5c9e24ae45c6ecb6ca33c361144b1112db796dc791ada1358cd2c533807d6730
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Blosc is a high performance compressor optimized for binary data. It has been designed to transmit data to the processor cache faster than the traditional, non-compressed, direct memory fetch approach via a memcpy() OS call.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-c2a.a2c-1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6892
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-c2a.a2c-1.4_1.0_amd64.deb
Size: 2176602
MD5sum: c1894eb5516d1efd4abe3a2382e75e08
SHA1: a012bbca3a342d9f73b046d80a513885dc415198
SHA256: 058d7115bf32e5d7d8226310450587c38c2b88c5a1d1278930aad78b885e0e3b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cablast-1.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2502
Depends: gensoft-libiconv-1.16, zlib1g, gensoft-xz-5.2.4, gensoft-libxml2-2.9.10, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cablast-1.2.2_1.0_amd64.deb
Size: 817968
MD5sum: a7608fd076c79d9ed4cfa5935529c1ea
SHA1: 91d20094a5c0678010720127c66e096ea810eeb2
SHA256: 116b802fb1369349e9dcbf13667c5d0e6b3d81f58aaca491d05d82e492146874
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Compression-accelerated BLAST and BLAT
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cactus-2.0.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 732902
Depends: gensoft-vg-1.37.0, gensoft-tabix-0.2.6, gensoft-hal2vg-1.0.16, gensoft-dna-nn-0.1, libstdc++6, gensoft-gfaffix-0.1.2.4, libcrypt1, gensoft-gfatools-0.5, gensoft-bedtools-2.29.2, gensoft-adm-python-3.8.1, gensoft-minimap2-2.17, gensoft-samtools-1.13, libc6, libgcc-s1, zlib1g, gensoft-ucsc-tools-v390, gensoft-minigraph-0.15
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cactus-2.0.4_1.0_amd64.deb
Size: 233918610
MD5sum: f23f1ebce8e42689f35b96b1158edcaf
SHA1: b747715ad7c9135361cca7398e00d11e1546e683
SHA256: 04bbae5e5d00b7eea724521bf716e4171325028e0d8997574bd61314920aad41
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cactus is a reference-free whole-genome multiple alignment program.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cactus-2.2.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1225295
Depends: gensoft-gcc-9.2.0, gensoft-htslib-1.16, libbz2-1.0, libc6, gensoft-libiconv-1.16, gensoft-gfaffix-0.1.2.4, gensoft-adm-python-3.8.1, gensoft-vg-1.37.0, gensoft-minigraph-0.18, gensoft-libxml2-2.9.10, zlib1g, gensoft-cactus-gfa-tools-437ac2f, gensoft-gfatools-0.5, gensoft-clapack-3.2.1, gensoft-dna-nn-0.1, gensoft-minimap2-2.17, libgcc-s1, gensoft-hal2vg-1.0.17, gensoft-xz-5.2.5, gensoft-samtools-1.16, gensoft-bedtools-2.29.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cactus-2.2.3_1.0_amd64.deb
Size: 337516746
MD5sum: 62bfb52473482b51e25821e1aef5a4be
SHA1: c09d3bb6c236d69d40263df38734815067faee2b
SHA256: cbfca2848c2e5c1c1988ce510e8d2f9f2687935603ee6cc69f3c72955cb4da7a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cactus is a reference-free whole-genome multiple alignment program.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cactus-2.2.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1279625
Depends: gensoft-cactus-gfa-tools-437ac2f, gensoft-gfaffix-0.1.2.4, gensoft-minimap2-2.17, gensoft-samtools-1.16, gensoft-gfatools-0.5, libbz2-1.0, gensoft-adm-python-3.8.1, gensoft-libxml2-2.9.10, gensoft-libiconv-1.16, libgcc-s1, gensoft-xz-5.2.5, gensoft-dna-nn-0.1, gensoft-clapack-3.2.1, libc6, gensoft-hal2vg-1.0.17, gensoft-bedtools-2.29.2, gensoft-htslib-1.16, zlib1g, gensoft-minigraph-0.18, gensoft-gcc-9.2.0, gensoft-vg-1.37.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cactus-2.2.4_1.0_amd64.deb
Size: 353210372
MD5sum: 9d59172c43e7aba9d6eaa3fc7c7de43d
SHA1: a5d427066b28f5d4c47118f2423e27b8ecad4e73
SHA256: 252c5c63750278a3f897a7a0f8e6d5408f3206b436df8018fa845a6bb999e301
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cactus is a reference-free whole-genome multiple alignment program.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cactus-gfa-tools-437ac2f
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 35976
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cactus-gfa-tools-437ac2f_1.0_amd64.deb
Size: 8385692
MD5sum: d9398071ef5c1c5c78db8f205e10bf0a
SHA1: fb109b3af6cfec044bbaf1c254ce32f71b6f4ad9
SHA256: 525a6de64d845913813291ee05b96758829e3c362001772528dcb1baeaa24e4d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Command-line utilitites required for the Cactus Pangenome Pipeline
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cairo-1.16.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 31320
Depends: gensoft-fontconfig-2.13.91, gensoft-glib-2.58.3, libc6, zlib1g, gensoft-expat-2.2.9, libbz2-1.0, gensoft-freetype-2.10.1, gensoft-xorg-libs-1.1, gensoft-libffi-3.3, gensoft-libpng-1.6.37, gensoft-pixman-0.38.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cairo-1.16.0_1.0_amd64.deb
Size: 9360052
MD5sum: 5f204c81dbdc03d2aa66e8fa67bfe2c9
SHA1: f08f0a043394ae442b16a811e3ca8f247af536b0
SHA256: d43d6012d3b3b078bdbea7d967aa0f7de2c895d884132fe716b51e669f284058
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cairo is a 2D graphics library with support for multiple output devices.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cairo-1.17.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 29591
Depends: gensoft-lzo-2.10, gensoft-pcre-8.43, gensoft-libpng-1.6.37, gensoft-pixman-0.38.4, gensoft-libiconv-1.16, libc6, gensoft-xorg-libs-1.1, gensoft-expat-2.2.9, zlib1g, gensoft-glib-2.66.7, libbz2-1.0, gensoft-freetype-2.10.1, gensoft-libffi-3.3, gensoft-fontconfig-2.13.91
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cairo-1.17.4_1.0_amd64.deb
Size: 9176430
MD5sum: 7d94095b402fa8d93af168101262ef51
SHA1: 39ff8c9da580589b6b07501d2cb54a728ad62ec1
SHA256: 1845e69a2eb1e4fe004e29df05c23bcfa9ae0c4a0b6dde922e85941bbc9df6f9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cairo is a 2D graphics library with support for multiple output devices.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cairomm-1.14.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4798
Depends: gensoft-freetype-2.10.1, gensoft-cairo-1.16.0, gensoft-libsigc++-2.10.4, zlib1g, gensoft-libpng-1.6.37, gensoft-expat-2.2.9, libbz2-1.0, gensoft-pixman-0.38.4, libc6, gensoft-xorg-libs-1.1, gensoft-fontconfig-2.13.91, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cairomm-1.14.2_1.0_amd64.deb
Size: 1269398
MD5sum: b3d5c24474f7d547da4f1cd45446e8cd
SHA1: 847b99ac9f03b77d30cd6349c8e1f25b7f3401ff
SHA256: 9af8a81a09d04ea6d03fb85a882f799f038d8495e452e247ed8d43ed8d6640b4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: C++ interface to Cairo.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-camsa-1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 215542
Depends: gensoft-adm-python-3.8.1, gensoft-mummer-3.23
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-camsa-1.3_1.0_amd64.deb
Size: 70405596
MD5sum: 76f3958cc06ade8470f37ef80d1c2fc9
SHA1: 8ba3ff18f98a8ca9947a59d99ed5db49f965e9c3
SHA256: eae0ad6e6c1b9d399e982f060ef55553e07f311631e422f9276ac3bb5a90f7d3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for Comparative Analysis and Merging of Scaffold Assemblies, distributed both as a standalone software package and as Python library under the MIT license.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-canu-1.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 142067
Depends: gensoft-gcc-9.2.0, gensoft-graalvm-ce-java8-20.0.0, gensoft-adm-perl-5.30.1, libc6, gensoft-gnuplot-5.2.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-canu-1.9_1.0_amd64.deb
Size: 53285246
MD5sum: e686c274b84261847e81772252b0e369
SHA1: bee4d9154756d3df32b1ab672fb7fe672bc76cff
SHA256: 1e52957b78f4fea75161df879fa0086cd0d2359f7492aa2fc27a6f0e8e7a71da
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-canu-2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 98183
Depends: libc6, gensoft-graalvm-ce-java8-20.0.0, gensoft-gnuplot-5.2.8, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-canu-2.1_1.0_amd64.deb
Size: 34996816
MD5sum: 7c69a6deb243c72bef2db21803270079
SHA1: 8e46ffd5542f87259c0fc8cb24f165b6bb4a6755
SHA256: dd1b14efd6dc55bcfd64f289e43844738ae42ceafb121436b07bf6228a740b11
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-canu-2.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 120260
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, libc6, gensoft-gnuplot-5.2.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-canu-2.2_1.0_amd64.deb
Size: 41955840
MD5sum: e32229e818cb93f1e9843aeeac63dc04
SHA1: 6e3cc55008573b7506b1aa4f143fbfb1784be984
SHA256: 559440359f9456d1338090467a04b9c909931880bf81dc2b04312077d6558269
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cap3-02-10-15
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 156
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cap3-02-10-15_1.0_amd64.deb
Size: 68574
MD5sum: c11031350003f82d0eebcaa106773c45
SHA1: de732d3cd7110c12cbae0eaf1970ef1890ac318d
SHA256: 0b28cf597c496c7a564b80b94051582040bec761c7adbfc0fd31bde14b324a48
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DNA sequence assembly program
License: unknown
Vendor: Institut Pasteur

Package: gensoft-caper-2.1.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 502355
Depends: gensoft-graalvm-ce-java11-20.0.0, gensoft-singularity-3.8.3, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-caper-2.1.2_1.0_amd64.deb
Size: 153809364
MD5sum: 51fd075d71c091374631aa8488c654f1
SHA1: a969a8c0c2d30baa04cea06dc1695fd61060ad95
SHA256: 0cc527f1d11699f7beb6bb323a1008ce8220c2b2405c71080fba28f5a2ce726c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Caper (Cromwell Assisted Pipeline ExecutoR) is a wrapper Python package for Cromwell.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-capmq-0.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 59
Depends: zlib1g, libssl1.1, gensoft-curl-7.68.0, libc6, gensoft-xz-5.2.5, gensoft-htslib-1.9, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-capmq-0.5_1.0_amd64.deb
Size: 22312
MD5sum: 4acb28786b212416aa5b9f90bf9e2e94
SHA1: e88eb3d66c54c62bb3a0516960f3a85b653275ea
SHA256: b3110ee966623df56094d19e730ad44a3f8b49ff9a9d3b15b5acb33622748856
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cap the mapping quality in a given alignment file
License: unknown
Vendor: Institut Pasteur

Package: gensoft-capnproto-0.7.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 19120
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-capnproto-0.7.0_1.0_amd64.deb
Size: 4450056
MD5sum: 48a163a11d81f94ffecf11a694b51600
SHA1: 21103cb79643d84116710a442f56832942616d51
SHA256: 24ea111e7c8dde29a45ce73fcfc2eaf6b1c869f67ed99e100716b1381f21878d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fast data interchange format and capability-based RPC system
License: unknown
Vendor: Institut Pasteur

Package: gensoft-casper-0.8.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 94
Depends: libc6, gensoft-gcc-9.2.0, gensoft-jellyfish-2.3.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-casper-0.8.2_1.0_amd64.deb
Size: 36972
MD5sum: 826b15b776e56d976d6cfb4292ae69d5
SHA1: 43338ce1014588378bdf5bb3e6dc24c3aaded7fb
SHA256: 8356ce25f552a5ef67670b12a1c41d0b12ba53db1221eaa179c3e762a2e5d083
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CASPER (Context-Aware Scheme for Paired-End Read) is state-of-the art merging tool in terms of accuracy and robustness. Using this sophisticated merging method, we could get elongated reads from the forward and reverse reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cath-tools-0.16.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 55981
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cath-tools-0.16.2_1.0_amd64.deb
Size: 17304254
MD5sum: fd403d99392aee6ceee554cedeab6799
SHA1: 868a09ced146bad4ed4cc9c5e189fd2195e0a250
SHA256: efa1e01b0ab9d0b3004f8328c9bd71a8a3d989fa872da0093f41bd03cd95dca7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Protein structure comparison tools such as SSAP and SNAP.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cblas-3.8.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 435
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cblas-3.8.0_1.0_amd64.deb
Size: 43456
MD5sum: a63528550baa6da5ae712d6ae3504e40
SHA1: 80fc835e46bd0db913f82ae432d1a7afac7a6444
SHA256: a769a433262a1ce910e47905b64fc331c84289f1164dce541efec32cdedd76a4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: C interface to Legacy BLAS (Basic Linear Algebra Subprograms).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ccat-3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 69
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ccat-3.0_1.0_amd64.deb
Size: 20976
MD5sum: c73ba839b5e32c4b955a8a3185c431cb
SHA1: b61f761c8ef07f1473e48f48fd4548d1123707bc
SHA256: eba079659e6c819b0af97f817773cbc8942b8ba934b7ca1fbfc291849a0d13c2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A Signal-Noise model for significance analysis of ChIP-seq with Negative Control
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ccs-6.3.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 7873
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ccs-6.3.0_1.0_amd64.deb
Size: 3730524
MD5sum: 332d5ee6ce67bae3cc3fcf92faf8a601
SHA1: 5748606b5ffa13b6640f1d354b4b8dfa23373df2
SHA256: 2dca3d035cd4abc566c354cf4384fc14b933b67aafec040f59238c4a3238b844
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cd-hit-4.8.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1959
Depends: libc6, gensoft-gcc-9.2.0, zlib1g, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cd-hit-4.8.1_1.0_amd64.deb
Size: 947454
MD5sum: 0c992f2ffee6346d2be3d75404a6f212
SHA1: 658799f8214fa0689cb91c66f9e01218fb1c8c0f
SHA256: dcab5e42a7fdae184710977d07679c0d7ef999867b1abfe093ebd5ffe054e6b9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program for clustering DNA/protein sequence database at high identity with tolerance.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cdbfasta-0.99
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 198
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cdbfasta-0.99_1.0_amd64.deb
Size: 87938
MD5sum: a982a224c6ce953ee983c9e31892bb21
SHA1: d43d0708f784c5a66ae807331bf22aa337980b37
SHA256: e4986a1359554de811c32fa1fff9573de18f7c75673b34f80ccbc12176d03135
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CDB (Constant DataBase) indexing and retrieval tools for FASTA files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ceas-1.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7472
Depends: gensoft-adm-python-2.7.17, gensoft-sqlite-3.31.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ceas-1.0.2_1.0_amd64.deb
Size: 2220674
MD5sum: 7222c268f01d38f5dd1cee8533f9a10b
SHA1: 7e4783daa3335fae0a0e0c750bc1e4cec2319472
SHA256: 2497d3fe2a5903b33cb4cac385dddb3c0e5d0c692ac72b3fb8f7f609398c7bba
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CEAS (Cis-regulatory Element Annotation System), provides statistics on ChIP enrichment at important genome features such as specific chromosome, promoters, gene bodies, or exons, and infers genes most likely to be regulated by a binding factor
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cegma-v2.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 76302
Depends: gensoft-adm-perl-5.30.1, gensoft-hmmer-3.3, gensoft-geneid-v1.4.4, sed, gensoft-blast+-2.10.0, gensoft-wise2-2.4.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cegma-v2.5_1.0_amd64.deb
Size: 12308890
MD5sum: 00b1f2fe4410a6b76c9fc9361a45cfb7
SHA1: 9b7563b44bdf3e57cd53945bbb7f4d1745d061f7
SHA256: d0e7c688e7049cc2cde123c3237699d12fb2a2773280e7dcf52a218dcab2cbac
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: (Core Eukaryotic Genes Mapping Approach) is a pipeline for building a set of high reliable set of gene annotations in virtually any eukaryotic genome. The strategy relies on a simple fact some highly conserved proteins are encoded in essentially all eukaryotic genomes. We use the KOGs database to build a set of these highly conserved ubiquitous proteins. We define a set of 458 core proteins, and the protocol, CEGMA, to find orthologs of the core proteins in new genomes and to determine their exon-intron structures.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-celera-assembler-8.3rc2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 65309
Depends: zlib1g, gensoft-adm-perl-5.30.1, gensoft-graalvm-ce-java8-20.0.0, tcsh, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-celera-assembler-8.3rc2_1.0_amd64.deb
Size: 33103722
MD5sum: bb2a1804d41ba9fa04500566735c61e3
SHA1: 3f845380b1c58136d622808f179e3a57ac0d3312
SHA256: 443e5c4a4c9b7bb50a7b17ad54cfaf7c53be0951441aef2197da7f91b885a0ec
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Celera Assembler is a de novo whole-genome shotgun (WGS) DNA sequence assembler. It reconstructs long sequences of genomic DNA from fragmentary data produced by whole-genome shotgun sequencing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cellranger-5.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2237464
Depends: gensoft-bcl2fastq-2.20.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cellranger-5.0.1_1.0_amd64.deb
Size: 1003021738
MD5sum: a35941863e8071e82e44839534393d90
SHA1: cdbf6c069cef7e2e9fccd53e4ab88bf8b8828866
SHA256: ebd30569962e90866f47aed5a8b92cf15bc40ee07847f2b505ab92468c76e931
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cell Ranger is a set of analysis pipelines that process Chromium single-cell RNA-seq output to align reads, generate feature-barcode matrices and perform clustering and gene expression analysis.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cellranger-6.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2497184
Depends: gensoft-bcl2fastq-2.20.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cellranger-6.0.1_1.0_amd64.deb
Size: 1091336246
MD5sum: 4a0e85f9f6d02e993ccd1ac158eabbb2
SHA1: 3541f2e2a6315e865469db08c25874b087772f87
SHA256: 739e37539dc11e00c67354238dde5fe1588ac255de234ca44d7249a3ce540070
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cell Ranger is a set of analysis pipelines that process Chromium single-cell RNA-seq output to align reads, generate feature-barcode matrices and perform clustering and gene expression analysis.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cellranger-7.1.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1858550
Depends: debianutils, gensoft-bcl2fastq-2.20.0, libc6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cellranger-7.1.0_1.0_amd64.deb
Size: 675808154
MD5sum: dda8f2fa0e17659831887d2417fed618
SHA1: 447fb3834035eee026a7cf0b8afc97c0a1817cd8
SHA256: 4a9d28d82eed6992342dd951baed94328e211db26370af3c01be983f8d5eb80c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cell Ranger is a set of analysis pipelines that process Chromium single-cell RNA-seq output to align reads, generate feature-barcode matrices and perform clustering and gene expression analysis.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cellranger-arc-2.0.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1938784
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cellranger-arc-2.0.0_1.0_amd64.deb
Size: 733897520
MD5sum: c4738b9af0fbae7004a5fcbc2a7f13ca
SHA1: bba2f322ae132d0e898dfa281665d961bff8b630
SHA256: 38a50ccc66aae48a392808bc3d20ac7c51137c864bd53e0705ed465905b1000f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a set of analysis pipelines that process Chromium Single Cell Multiome ATAC + Gene Expression sequencing data to generate a variety of analyses pertaining to gene expression, chromatin accessibility and their linkage.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cellranger-atac-2.1.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1523726
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cellranger-atac-2.1.0_1.0_amd64.deb
Size: 558286810
MD5sum: 074aa11dd6ad2a3c64c41c4303e7ef33
SHA1: 2c5cad68a7da1fda3e22ec0cfb5aece0e63016c2
SHA256: b8c7e3a9e57c04b1d9484cb1af70495a23c10c9c14fa10952eda27ce319ed15c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a set of analysis pipelines that process Chromium Single Cell ATAC data. Cell Ranger ATAC includes four pipelines relevant to Single Cell ATAC experiments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cenote-taker2-2.1.5
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 218610
Depends: gensoft-phanotate-1.5.0, gensoft-seqkit-2.3.1, gensoft-hhsuite-3.3.0, gensoft-bbmap-38.91, gensoft-bioawk-1.0, gensoft-bowtie2-2.3.5.1, gensoft-adm-python-3.6.15, gensoft-adm-perl-5.30.1, libstdc++6, zlib1g, gensoft-hmmer-3.3.2, gensoft-cmake-3.17.2, gensoft-blast+-2.13.0, gensoft-xz-5.2.5, libgcc-s1, libbz2-1.0, gensoft-samtools-1.4, gensoft-prodigal-2.6.3.pp1, gensoft-trnascan-se-2.0.9, gensoft-last-1389, gensoft-edirect-18.2, gensoft-tbb-2020.1, gensoft-bedtools-2.29.2, gensoft-ncbitools-20170106, libssl1.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cenote-taker2-2.1.5_1.0_amd64.deb
Size: 71369262
MD5sum: 6913e0c68886358e228481c8bac010a1
SHA1: f142b3009f8205d6974421614eec0925b9d6c58a
SHA256: ddb079b76eabe6dcd9aaf7899ceee108b0e6d02245df7460bd079db99802fd63
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cenote-Taker 2 is a dual function bioinformatics tool. On the one hand, Cenote-Taker 2 can discover/predict virus sequences from any kind of genome or metagenomic assembly. On the other hand, virus sequences/genomes (perhaps predicted by another tool?) can be annotated with a variety of sequences features, genes, and taxonomy. Either the discovery or the the annotation module can be used independently.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-centrifuge-1.0.4-beta
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 19335
Depends: gensoft-adm-perl-5.30.1, libc6, gensoft-blast+-2.10.0, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-centrifuge-1.0.4-beta_1.0_amd64.deb
Size: 5569988
MD5sum: 99da75e8dc4d13afef7375a0d7cfc764
SHA1: 5faccda399a43a5701c118e5a5ed50ede3ac3b40
SHA256: 6252e34c1f4430f1b3a9d6d2e6887d701f32af8e05f3658f2d23cb42aa82046b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a novel microbial classification engine that enables rapid, accurate and sensitive labeling of reads and quantification of species on desktop computers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cereal-1.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1372
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cereal-1.3.0_1.0_amd64.deb
Size: 251530
MD5sum: 6933fc8defef9fec12e126e70d6dbd97
SHA1: ff6db043ff5d31a6792f30feefd7aa4b34ce0ea5
SHA256: 23f2afc96cca30284cbb333087a14300a08e8c4f617581ae2afb68fe682ad529
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: cereal is a header-only C++11 serialization library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cern-root-v6.20.04
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 574027
Depends: gensoft-cern-root-v6.20.04, gensoft-zlib-1.2.11, gensoft-libpng-1.6.37, gensoft-zstd-1.4.4, libbz2-1.0, gensoft-tbb-2020.1, gensoft-mesa-19.0.8, libkeyutils1, gensoft-gsl-2.5, gensoft-fftw-3.3.8, gensoft-xorg-libs-1.1, gensoft-pcre-8.43, gensoft-gcc-9.2.0, gensoft-lapack-3.9.0, libkrb5support0, gensoft-libtiff-4.1.0, libc6, gensoft-adm-python-2.7.17, gensoft-libuuid-1.0.3, gensoft-glu-9.0.1, gensoft-expat-2.2.9, gensoft-adm-perl-5.30.1, libkrb5-3, gensoft-libdrm-2.4.100, gensoft-fontconfig-2.13.91, gensoft-libiconv-1.16, gensoft-xz-5.2.4, gensoft-giflib-5.2.1, gensoft-libxml2-2.9.10, libcomerr2, libssl1.1, gensoft-lz4-1.9.2, gensoft-mysql-client-8.0.19, gensoft-libjpeg-turbo-2.0.4, gensoft-sqlite-3.31.0, libk5crypto3, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cern-root-v6.20.04_1.0_amd64.deb
Size: 236573862
MD5sum: f472a832590e1a7bdd07d55d222b85e7
SHA1: 62dd439b8435b7a582b65d62a1beab12fa1727f8
SHA256: c38baba5b1fde06d358a20e5b852a25fdb0ebfdf35c24c332b9dd5e709d88369
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a framework for data processing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cgal-5.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 34663
Depends: gensoft-mpfr-4.0.2, gensoft-gmp-6.2.0, gensoft-boost-1.72.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cgal-5.0.2_1.0_amd64.deb
Size: 6344154
MD5sum: 2a0327bb889f81a1a79120cbe1f16a2f
SHA1: 31ff3a0abec6c7431c932ebe05a0b289d896154f
SHA256: 34c113b850e5b3064a1134c8ef7813124bbccfe135456b8502dea720deb885f6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CGAL is a software project that provides easy access to efficient and reliable geometric algorithms in the form of a C++ library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cgatools-1.8.0.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5010
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cgatools-1.8.0.1_1.0_amd64.deb
Size: 2004430
MD5sum: 027e1527bd7a57c3b64b0cd646ec024a
SHA1: ef1940677e3cdf0edf4fdd8f40c6644a661d19e6
SHA256: 505f79738f1a477cb7b6e070dcb43266999d8cc08085a31f5e407441333b2211
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tools for downstream analysis of Complete Genomics data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cgcat-20140218
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 674
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cgcat-20140218_1.0_amd64.deb
Size: 643220
MD5sum: 88945c3866e12472c0739e549553dbce
SHA1: 69d694daae0cabda68997710a961c7a81dd5302b
SHA256: c5cd7f35a0b3e4a47f6b9091f47b85b458140c23d0611bf14fd48aa5a9b0e8ee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This is a toolsuite for ordering and orienting contigs in a comparative genomic fashion.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cgl-0.60.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1543
Depends: gensoft-osi-0.108.6, gensoft-coinutils-2.11.4, libc6, gensoft-gcc-9.2.0, gensoft-clp-1.17.6, gensoft-lapack-3.9.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cgl-0.60.3_1.0_amd64.deb
Size: 641652
MD5sum: 410fbaa0d5960edecfc1ffbef9cecf11
SHA1: 8d72ed9ca4d6651dcccc5247b06d27b6154bd6a1
SHA256: 8693c760c365aa995cba4885cd465716b80d9955e122237a0a3313cfd92a96a1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The COIN-OR Cut Generation Library (Cgl) is a collection of cut generators that can be used with other COIN-OR packages that make use of cuts
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cgmlst-dists-0.4.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 20
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cgmlst-dists-0.4.0_1.0_amd64.deb
Size: 8568
MD5sum: 75281a29792025dc6361450e55857fb6
SHA1: c710e30b65d1e36abb8aecfe31461b7ea86c4fff
SHA256: 11fcfac96efe4e9ed252d8ea38af0dbe3c69f83c014dc519ef0430c1d8ec4618
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Calculate distance matrix from ChewBBACA cgMLST allele call tables
License: unknown
Vendor: Institut Pasteur

Package: gensoft-charm-6.10.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 46238
Depends: gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-charm-6.10.2_1.0_amd64.deb
Size: 12012478
MD5sum: 5c838fb47e8f022bed6e31ac14b0d9db
SHA1: 5dda1e69c3369949d50cccda1e73efd795e364a5
SHA256: dfc4f9de6f5411f2d36148e7cd334a3170f34e302f7d6f5f8cf56a6e0d682a8b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Message-passing parallel language and runtime system
License: unknown
Vendor: Institut Pasteur

Package: gensoft-charm-6.10.2-mpi
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 49843
Depends: gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-charm-6.10.2-mpi_1.0_amd64.deb
Size: 12893722
MD5sum: 609a387ca345fa88b54ddd7f7f8e2101
SHA1: a3703fcaab1f142aa7ce4630357051532656025e
SHA256: 0097ccbc332564a2f7b27b722ee8e9808a42865a096d2b6a76242a8e64f73c64
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Message-passing parallel language and runtime system
License: unknown
Vendor: Institut Pasteur

Package: gensoft-charm-6.10.2-mpi-cuda
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 49924
Depends: gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5, gensoft-cuda-11.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-charm-6.10.2-mpi-cuda_1.0_amd64.deb
Size: 12930224
MD5sum: f1b7fa3b5699a2c58f34d29974b09f46
SHA1: 2b05e8b7de83e6755b107702a069377023a1a78e
SHA256: 27e427376322275a35ea2a91aff4bd40d4eba8f2377ec534ce6ba239228468bd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Message-passing parallel language and runtime system
License: unknown
Vendor: Institut Pasteur

Package: gensoft-charm-6.8.2-mpi
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 41878
Depends: gensoft-adm-python-2.7.17, gensoft-adm-perl-5.30.1, gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-charm-6.8.2-mpi_1.0_amd64.deb
Size: 10305360
MD5sum: 7e01220da1151747c3561e112eac7f27
SHA1: f55640a14db0d70bb48465dc3b24b51278f77e7d
SHA256: 702bf09e34c919487707c2acadfab8e9712cfc93084ad749bde0586495a72a5e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Message-passing parallel language and runtime system
License: unknown
Vendor: Institut Pasteur

Package: gensoft-charmm-v45
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 42581
Depends: zlib1g, gensoft-openmm-7.5.1, libc6, gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, gensoft-fftw-3.3.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-charmm-v45_1.0_amd64.deb
Size: 12244394
MD5sum: 0b7b926a294e789df0fa4f9257b81c84
SHA1: 781a10e3ada6b3781ea01dd72d963c71ed402481
SHA256: aafdd01d1373f7289ac2ba7eba927e5baed751cbe90a2b9a4f2b42806547938d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A molecular simulation program with broad application to many-particle systems with a comprehensive set of energy functions, a variety of enhanced sampling methods, and support for multi-scale techniques including QM/MM, MM/CG, and a range of implicit solvent models. FREE VERSION
License: unknown
Vendor: Institut Pasteur

Package: gensoft-checkm-1.1.2
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1736160
Depends: libssl1.1, libbz2-1.0, gensoft-adm-python-3.8.1, gensoft-pplacer-v1.1-alpha19, zlib1g, libc6, gensoft-prodigal-2.6.3.pp1, gensoft-hmmer-3.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-checkm-1.1.2_2.0_amd64.deb
Size: 375380896
MD5sum: a6cb4cc5dfb781a0614fb78d269bbac9
SHA1: 5f0a19ab4f59ba07388a541ca8ee5f24c84c2338
SHA256: 5c15904dd0e0231bc3681054da871f6c1a9a97a8a5d0cbb1a66d6b724e39df44
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-checkm-1.1.3
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1736161
Depends: gensoft-pplacer-v1.1-alpha19, zlib1g, gensoft-adm-python-3.8.1, libssl1.1, libc6, gensoft-hmmer-3.3, gensoft-prodigal-2.6.3.pp1, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-checkm-1.1.3_2.0_amd64.deb
Size: 375380708
MD5sum: 13f788a4c09514464d25d3afef1ca4b8
SHA1: d0cb7ab7f3a288a505c8b824e633f78360a5f22c
SHA256: 356e4e011363c660d113fc1737e96565784f1ad7a8dbbf294fb56166b10cf06b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-checkm2-1.0.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 174556
Depends: gensoft-diamond-2.0.4, zlib1g, libbz2-1.0, gensoft-prodigal-2.6.3.pp1, libssl1.1, gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-checkm2-1.0.2_1.0_amd64.deb
Size: 71978548
MD5sum: 8be8c820124051584b46b05fef78b11e
SHA1: 57fd5bbe18cd1bef1b1958541a326a35e38c2135
SHA256: 3457f9e7545d7398654d55e1a9eb0b6c49945b09019da90c5b5980b91c6b5a7b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assessing the quality of metagenome-derived genome bins using machine learning
License: unknown
Vendor: Institut Pasteur

Package: gensoft-checkv-0.7.0
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 95788
Depends: gensoft-adm-python-3.8.1, gensoft-diamond-2.0.4, libc6, gensoft-hmmer-3.3, gensoft-prodigal-2.6.3.pp1, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-checkv-0.7.0_2.0_amd64.deb
Size: 27856232
MD5sum: 43914804b2ad5fb79d06b50701956225
SHA1: 3a2447f576260b3d46fbc3e6b1aa8791e5c3f3f2
SHA256: b6cee99e404a3bfe4b6fa71b779e61f33e27777027b4dce4f65cebcd4959cd68
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a fully automated command-line pipeline for assessing the quality of single-contig viral genomes, including identification of host contamination for integrated proviruses, estimating completeness for genome fragments, and identification of closed genomes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-checkv-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 95629
Depends: gensoft-adm-python-3.8.1, gensoft-diamond-2.0.4, gensoft-prodigal-gv-2.9.0, libgcc-s1, zlib1g, libc6, gensoft-hmmer-3.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-checkv-1.0.1_1.0_amd64.deb
Size: 27879918
MD5sum: e617f70e324b9b27c23dca71d24452f9
SHA1: e43147ddccfff2394a634498cb264491ecbce526
SHA256: 930546333fdb584eea094208ab154d8ea8b5aec7c7d5832214aa53e538b1afff
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a fully automated command-line pipeline for assessing the quality of single-contig viral genomes, including identification of host contamination for integrated proviruses, estimating completeness for genome fragments, and identification of closed genomes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-chewbbaca-2.5.5
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 297699
Depends: gensoft-mafft-7.467, gensoft-prodigal-2.6.3.pp1, gensoft-clustalw-2.1, gensoft-adm-python-3.8.1, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-chewbbaca-2.5.5_2.0_amd64.deb
Size: 82351204
MD5sum: 17e54f7450cab766e923031e10008dc4
SHA1: d0d2a54c0254bed6ba8e8845a7713f21c168a6ed
SHA256: 834ae0f49a6f8562fe341a8dcb22ebdfb2137e242b45f512e7011803bbe4e9c2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: chewBBACA is a comprehensive pipeline including a set of functions for the creation and validation of whole genome and core genome MultiLocus Sequence Typing (wg/cgMLST) schemas, providing an allele calling algorithm based on Blast Score Ratio
License: unknown
Vendor: Institut Pasteur

Package: gensoft-chewbbaca-2.8.5
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 315980
Depends: gensoft-adm-python-3.8.1, gensoft-blast+-2.10.0, gensoft-prodigal-2.6.3.pp1, gensoft-mafft-7.467
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-chewbbaca-2.8.5_2.0_amd64.deb
Size: 86856450
MD5sum: c922f5100ab2e54b96a4e2d928230042
SHA1: 89aaf9995b6151343c44c1cf974d7aa48c7a92d7
SHA256: 4cdcb97eb986b587e11f9f14f37f5bbbe27418eba1428156562410c3dbb74bce
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: chewBBACA is a comprehensive pipeline including a set of functions for the creation and validation of whole genome and core genome MultiLocus Sequence Typing (wg/cgMLST) schemas, providing an allele calling algorithm based on Blast Score Ratio
License: unknown
Vendor: Institut Pasteur

Package: gensoft-chipmunk-v8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6084
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-chipmunk-v8_1.0_amd64.deb
Size: 5576506
MD5sum: 1c9f5895cb3eb81b529928088d11eab6
SHA1: ba1aa99c934fde9399e54cccfc19f19631c85ebe
SHA256: 4031e3adaddd847e95d570eea1c4d0f6cf2a15f7b455bad56c483268bddf410e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fast heuristic DNA motif digger based a on greedy approach accompanied by bootstrapping. ChIPMunk identifies the strong motif with the maximum Discrete Information Content in a set of DNA sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-chromats-0.99
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 172
Depends: libbz2-1.0, zlib1g, bzip2, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-chromats-0.99_1.0_amd64.deb
Size: 55480
MD5sum: 3a8b6276e61691d33a5acfc965201b47
SHA1: 71aa5564ed2a743b9071461b514453f02d38a5a7
SHA256: 3b2e3d0707ccb6e0024cf0e84ce683b85d09e9908a9f8bcd67836492815d3118
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Small tools for sequencer trace data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-chromocombine-0.0.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9130
Depends: gensoft-libpng-1.6.37, gensoft-expat-2.2.9, gensoft-xz-5.2.4, gensoft-wxwidgets-3.1.3, gensoft-xorg-libs-1.1, gensoft-pango-1.42.4, gensoft-gdk-pixbuf-2.36.12, gensoft-gcc-9.2.0, gensoft-fontconfig-2.13.91, gensoft-libffi-3.3, gensoft-glib-2.58.3, gensoft-libjpeg-turbo-2.0.4, gensoft-gsl-2.6, gensoft-gtk+-2.24.32, gensoft-libtiff-4.1.0, gensoft-atk-2.9.4, gensoft-pcre2-10.34, gensoft-cairo-1.16.0, gensoft-harfbuzz-2.6.4, gensoft-pixman-0.38.4, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-chromocombine-0.0.4_1.0_amd64.deb
Size: 2092130
MD5sum: 32a2673a6268a2cfc5eba57a55e08e8f
SHA1: f8168fe0b717abbd43fc4b65f6bb8f1f2189d177
SHA256: 436f0985e95d7d4cbfe5e756644fb2a05231ca02606c9f2e91449e1116430b1a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ChromoCombine is a tool to help manage the large number of files generated when running ChromoPainter in parallel on a large number of separate compute nodes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-chromopainter-0.0.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6414
Depends: gensoft-libjpeg-turbo-2.0.4, gensoft-gcc-9.2.0, gensoft-libpng-1.6.37, gensoft-xz-5.2.4, gensoft-wxwidgets-3.1.3, gensoft-pixman-0.38.4, gensoft-gtk+-2.24.32, gensoft-xorg-libs-1.1, gensoft-gdk-pixbuf-2.36.12, gensoft-fontconfig-2.13.91, gensoft-harfbuzz-2.6.4, gensoft-cairo-1.16.0, gensoft-expat-2.2.9, gensoft-pango-1.42.4, gensoft-libffi-3.3, gensoft-gsl-2.6, gensoft-glib-2.58.3, gensoft-atk-2.9.4, gensoft-libtiff-4.1.0, gensoft-pcre2-10.34, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-chromopainter-0.0.4_1.0_amd64.deb
Size: 1481268
MD5sum: 87cd62ac6a1edba0d3a3b22e851ed403
SHA1: 02cd2565af8811da06e719f326c8c6606aeea045
SHA256: 2bf756cf26026fade623106ca41163c7cd4607210698531c1b063b21ac49e443
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for finding haplotypes in sequence data.  Each individual is "painted" as a combination of all other sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-chromopainter-v2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 298
Depends: gensoft-adm-perl-5.30.1, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-chromopainter-v2_1.0_amd64.deb
Size: 189346
MD5sum: d5062100384f72d532ea62b02712e9da
SHA1: 40bd56ef2011d88467c58e0fa148cd1bd23d090d
SHA256: dfacf85bdf195310d013a256028a51b2b5888ea8a5a763f632f3f2797cfa3601
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for finding haplotypes in sequence data.  Each individual is painted as a combination of all other sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-chrosort-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 119
Depends: gensoft-phred-071220.b, libc6, gensoft-phrap-1.090518
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-chrosort-1.0_1.0_amd64.deb
Size: 45982
MD5sum: 033565a15e04add76fe7b045c470a8a0
SHA1: e9ae51090499f7f6779d4ed8361c732e8177ea80
SHA256: 6b7703778f595582959245bef9b0c6b3c1e62c7609d376d8cabe783839d61268
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cif-0.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 39868
Depends: gensoft-libiconv-1.16, libc6, gensoft-expat-2.2.9, gensoft-xz-5.2.4, gensoft-adm-perl-5.30.1, gensoft-libxml2-2.9.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cif-0.2.3_1.0_amd64.deb
Size: 8500928
MD5sum: a586114575bd9f91652b497c864eaf18
SHA1: d68c6acc8a3c37c3e1d2c3e1941937d48f3b0996
SHA256: 9c52548da3fec78f1a996c78cd9c00f34088ea95b42240fdea87f7f1ea3efc2c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cut dna region in frame
License: unknown
Vendor: Institut Pasteur

Package: gensoft-circlator-1.5.5
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 70762
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-spades-3.14.0, gensoft-samtools-0.1.19, gensoft-gnuplot-5.2.8, gensoft-canu-1.9, gensoft-mummer-3.23, libc6, libbz2-1.0, gensoft-bwa-0.7.17, gensoft-adm-python-3.8.1, gensoft-prodigal-2.6.3.pp1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-circlator-1.5.5_2.0_amd64.deb
Size: 23005152
MD5sum: 557a5ab4f840976732fe7746ae26adf1
SHA1: f438d5e9659aff7b2943ca725f86c55b4aa4c10c
SHA256: 0002f1777323e8233d0a1f227761e4c3654968df1354c743f9d47cb59575312f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A tool to circularize genome assemblies.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-circos-0.69-9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 64515
Depends: gensoft-libgd-gd-2.2.5, gensoft-libtiff-4.1.0, gensoft-freetype-2.10.1, gensoft-libjpeg-turbo-2.0.4, gensoft-xz-5.2.4, gensoft-expat-2.2.9, libc6, gensoft-xorg-libs-1.1, zlib1g, gensoft-fontconfig-2.13.91, gensoft-adm-perl-5.30.1, gensoft-libpng-1.6.37, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-circos-0.69-9_1.0_amd64.deb
Size: 20734066
MD5sum: c86600755d881dc000f6156b4993d294
SHA1: cce59d9b3ab59f391109e6ee869e702eade773f9
SHA256: 038ef6ebcda4e5909b050ecbd19528ccba58edb5dcec1d182ce51f7bc63db5b7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: software package for visualizing data and information in circular layout
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cisgenome-2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 186050
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cisgenome-2.0_1.0_amd64.deb
Size: 81086688
MD5sum: f45f029370b8269bb56df436f59afa90
SHA1: 835502a9d98afa8a3c4d0ea0f59ca82181525a66
SHA256: 3939814324e093e3710e36df2b402f2e194157c3e995dda1ff545336b5fe8bea
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An integrated tool for tiling array, ChIP-seq, genome and cis-regulatory element analysis
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cistem-1.0.0-beta
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 47560
Depends: gensoft-cairo-1.16.0, gensoft-libtiff-4.1.0, gensoft-xorg-libs-1.1, gensoft-pango-1.42.4, gensoft-harfbuzz-2.6.4, gensoft-gtk+-2.24.32, gensoft-pixman-0.38.4, gensoft-libjpeg-turbo-2.0.4, gensoft-pcre2-10.34, libc6, gensoft-libffi-3.3, gensoft-wxwidgets-3.0.2, gensoft-atk-2.9.4, libselinux1, gensoft-xz-5.2.4, libmount1, gensoft-freetype-2.10.1, gensoft-gdk-pixbuf-2.36.12, libpcre2-8-0, gensoft-fontconfig-2.13.91, gensoft-fftw-3.3.8, libfribidi0, zlib1g, gensoft-gcc-9.2.0, libbz2-1.0, libblkid1, gensoft-glib-2.58.3, gensoft-expat-2.2.9, gensoft-libpng-1.6.37
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cistem-1.0.0-beta_1.0_amd64.deb
Size: 22054128
MD5sum: d936ac901593ed2ee19be3953a21b6c6
SHA1: da2fd676cea5718fc7c1656fb2b863dfa70a0bcf
SHA256: cce146580353d1f68e207b78ff9e9cbe34ae457447d1d3e8ec7f3a0d3f8d1bb4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: user-friendly software to process cryo-EM images of macromolecular complexes and obtain high-resolution 3D reconstructions from them
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clapack-3.2.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 21728
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clapack-3.2.1_2.0_amd64.deb
Size: 4139156
MD5sum: 75a46b1873da9484994cf6cfbb8701c8
SHA1: 69ebb5c06041a94363626c081fef4695e35d4757
SHA256: 3f9265df213a2b4822ac2fab85b1890761d0fee15b9610b6ce1f7f97edb99a89
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ANSI C translation of the LAPACK library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clearcut-1.0.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 110
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clearcut-1.0.9_1.0_amd64.deb
Size: 52636
MD5sum: 23b2f1cac8d21ed5b6cf4279e1c6f11b
SHA1: 262e7fad3ec1cb43166ab92bf762f948d576b310
SHA256: 4cba5de7fcae4a2680d0d385aac971778e811a86544c962ee0756399290f5bd0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Relaxed Neighbor Joining
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cli11-2.3.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 380
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cli11-2.3.1_1.0_amd64.deb
Size: 82432
MD5sum: 1a4361d2458030168669485129a2cb0b
SHA1: 7a7d99f9c4becd640b5df49dc294e04acc38e27f
SHA256: 449b02b0d0fac3be83fe1aba5f6db049da300af7b8b5d5e934a0655c10046c9e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a command line parser for C++11 and beyond that provides a rich feature set with a simple and intuitive interface.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clinker-0.0.23
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 239783
Depends: gensoft-adm-python-3.8.1, libgcc-s1, libstdc++6, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clinker-0.0.23_1.0_amd64.deb
Size: 73730936
MD5sum: c23f83839eba7b5667e155edd1500000
SHA1: 0847f8fcca292b51a4ca12f7a75d58ae9e089ce5
SHA256: db8276fddec899548b3346d54cca53118932849bc22582c5cafd073df4666e28
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Gene cluster comparison figure generator
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clinsv-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 138410
Depends: gensoft-adm-perl-5.30.1, gensoft-texlive-2022, libc6, gensoft-lumpy-sv-0.3.1, gensoft-r-4.2.1, libssl1.1, zlib1g, gensoft-adm-python-2.7.17, gensoft-libbigwig-0.4.7, gensoft-adm-python-3.8.1, gensoft-samtools-1.4, gensoft-htslib-1.4, libgcc-s1, gensoft-curl-7.68.0, gensoft-ucsc-tools-v390, gensoft-cnvnator-v0.3.3, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clinsv-1.0.0_1.0_amd64.deb
Size: 42688706
MD5sum: 138b4ab148b68e7e400b93a4294f1d8e
SHA1: edb53fcd920902f11fc58affe08872652c8fcc98
SHA256: 2647dfe3879766a8fb14670442c8598ea01ecdf92fa996ca85a345b84da53db3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clipper-1.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1124776
Depends: gensoft-lzo-2.10, libgcc-s1, zlib1g, gensoft-gcc-9.2.0, libstdc++6, libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clipper-1.2.1_1.0_amd64.deb
Size: 275089780
MD5sum: e30898f300af0e6bc6bbc580fac7184f
SHA1: a12da234dd9d9309c2f04087062b09b6df8fe09e
SHA256: 26e89548735f99b526b0b311da6c07e6287a9a588dfe6f29a7356f7aa3c4401f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CLIPper, CLIP peak enrichment recognition, is a tool to define peaks in your CLIP-seq dataset.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cln-1.3.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 219760
Depends: libc6, gensoft-gcc-9.2.0, gensoft-gmp-6.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cln-1.3.6_1.0_amd64.deb
Size: 48950732
MD5sum: 5fb2d9070364021676a2da6fe57c174b
SHA1: 3448e9a7a9ad4fa47313dbac4d0f10e57d907114
SHA256: 325f70f39e2517dbdb42f8a0c753766dc7b7dfc1a766d03c4c4cc205dcdcb3c7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CLN (Class Library for Numbers) is a library for efficient computations with all kinds of numbers in arbitrary precision
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clonalframe-1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1185
Depends: libc6, zlib1g, gensoft-gsl-2.6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clonalframe-1.2_1.0_amd64.deb
Size: 880038
MD5sum: cc93670f48cce41cc35ee2adde25a2ac
SHA1: ce7d21853ac81e4717daa0e1987926a26b590178
SHA256: a2e85421aafacad863fea887b127e72fcbc374bab175ba78550e029d22017bcc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Package for the inference of bacterial microevolution using multilocus sequence data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clonalframeml-1.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 295
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clonalframeml-1.12_1.0_amd64.deb
Size: 127312
MD5sum: 58233ca7a9b6a6715a46338d9d42a583
SHA1: 4a4af035608e41d756e72587c34fb5155e443c82
SHA256: df701554017f97599e2b432b9fde4eb2bdf7dd787d7560a0b789a61ba6686278
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ClonalFrameML is a maximum likelihood implementation of the Bayesian software ClonalFrame which was previously described by Didelot and Falush (2007). The recombination model underpinning ClonalFrameML is exactly the same as for ClonalFrame, but this new implementation is a lot faster, is able to deal with much larger genomic dataset, and does not suffer from MCMC convergence issues.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clp-1.17.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3647
Depends: gensoft-lapack-3.9.0, gensoft-gcc-9.2.0, gensoft-coinutils-2.11.4, gensoft-osi-0.108.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clp-1.17.6_1.0_amd64.deb
Size: 1459362
MD5sum: 4f2c34b92d4bd501e51376ad87e4dda7
SHA1: cba62a7798977938886f41208bebd2d3cc56ccce
SHA256: 6172b7e35f5c5ced377a569cea5b1f1819f3b0b8a752aa9a11c4fad25c7b265d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Clp (Coin-or linear programming) is an open-source linear programming solver.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clustal-omega-1.2.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9097
Depends: libc6, gensoft-argtable-2.13, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clustal-omega-1.2.4_1.0_amd64.deb
Size: 2543862
MD5sum: 4cdd9339f87c502e77ac938ae6e3e08c
SHA1: 6da4385422fa5ff4fc813f1e59fa6a29fe28cc04
SHA256: afd909cb6f8a1fa2d7a9c4fe7c992b3a7be4889b2be110717d2422d6b416d859
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CLUSTAL-OMEGA is a general purpose multiple sequence alignment program for proteins.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clustalw-2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 19317
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clustalw-2.1_1.0_amd64.deb
Size: 5428246
MD5sum: a48e313b255732d95ed2955002ad4c26
SHA1: 1374150e07aa6c80d40a947d6581255b224c6fcb
SHA256: 872375f858f09a2661a3c8f81a1f2d3ffcc9271d2fc63b06835c28f034bcc75c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A general purpose multiple alignment program for DNA or proteins
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cluster-buster-2010-02-19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 139
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cluster-buster-2010-02-19_1.0_amd64.deb
Size: 58712
MD5sum: f3e7ecaa5e47b63d95885cd02fe1c50e
SHA1: 8f441207208ea9860e3e8f3c7fd196f0115dfaba
SHA256: cd7bd3957c533d398a8e782a465d285c81994a198d7987d567445223f8a7597a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cluster-Buster is a program for finding interesting functional regions, such as transcriptional enhancers, in DNA sequences. Its main premise is that the functional region contains multiple smaller elements, e.g.  protein-binding sites, which thus occur in a cluster in the DNA sequence.  The user needs to specify a list of motifs short sequence patterns. the program will then look for dense clusters of these motifs in the sequence.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clusterone-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 564
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clusterone-1.0_1.0_amd64.deb
Size: 529632
MD5sum: d14112d5e6f59dcb2da9abc30e1f2fab
SHA1: ecb377901e335a08b975a51650309edecb42104d
SHA256: 84b661bf185527619b95c1aa30d03bef931f075ac698e2f3b1813dcb6615b96f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Clustering with Overlapping Neighborhood Expansion is a graph clustering algorithm that is able to handle weighted graphs and readily generates overlapping clusters
License: unknown
Vendor: Institut Pasteur

Package: gensoft-clusterone-1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 337
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-clusterone-1.2_1.0_amd64.deb
Size: 310476
MD5sum: 95f8bab761bdb021c0a7e458b06103af
SHA1: e6275544935e30ec66d41bb4ed1d4a23ca9b25cb
SHA256: abeeefa7af9b9642af0e2c3fa55d1e9915bfa7acdc4d7cb61bc32acb446fa7ed
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Clustering with Overlapping Neighborhood Expansion is a graph clustering algorithm that is able to handle weighted graphs and readily generates overlapping clusters
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cmake-3.16.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 73672
Depends: gensoft-gcc-9.2.0, libncurses5, libc6, libtinfo5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cmake-3.16.3_1.0_amd64.deb
Size: 20642558
MD5sum: 88208b6adfe572f28ff25c4346645043
SHA1: b88dfc5265a5e35481a62d0237d5906c1b48cbe3
SHA256: 2365de013be1607629465d4477d973ef18ec82511b1797188abcd661bb1b0395
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: cross-platform, open-source build system.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cmake-3.17.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 46951
Depends: libtinfo5, libc6, gensoft-gcc-9.2.0, libncurses5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cmake-3.17.2_1.0_amd64.deb
Size: 18606630
MD5sum: dce41ee6c9a38f7c797deda4effff67e
SHA1: ca4215383124455dfbdcf05ffb8e13638f3f8aaa
SHA256: 9fbf3ef841bb2fa7434bf0dfe394bdd2513fdacb03f00b4ecd30a9a42c173f87
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: cross-platform, open-source build system.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cmake-3.19.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 51024
Depends: gensoft-gcc-9.2.0, libtinfo5, libncurses5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cmake-3.19.4_1.0_amd64.deb
Size: 20217044
MD5sum: 34c375ccdddd31748e8e58005e16b3ef
SHA1: a4fe328c85d4bffc043392860dd4f9f09154bc19
SHA256: 2f504b23878573daa823e506d7e010c651a1ab079686ac518d37c42bb9e62f4b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: cross-platform, open-source build system.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cmake-3.27.7
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 75505
Depends: libc6, gensoft-gcc-9.2.0, libncurses5, libtinfo5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cmake-3.27.7_1.0_amd64.deb
Size: 27500166
MD5sum: b288e9f59c72ed396ea2bd4c270be8eb
SHA1: 92cda57cee5d8d3fa0be6a0c282910ad6bf61181
SHA256: 7af64b71680f25f369c96b697cc027d9c3585513e5f9a2528f99283f74b4e733
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: cross-platform, open-source build system.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cmseq-1.0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 268522
Depends: libc6, gensoft-adm-python-3.8.1, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cmseq-1.0.3_1.0_amd64.deb
Size: 83867274
MD5sum: 4ccb8fe689e5aa39330bcfc83055617e
SHA1: f75521660f00f383111080771ce05448400df216
SHA256: b67024aad14c5b9715cb39801f3042cf4ed5af4dee750d8202d326253831a503
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CMSeq is a set of commands to provide an interface to .bam files for coverage and sequence consensus.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cnvnator-v0.3.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2437
Depends: gensoft-lz4-1.9.2, libssl1.1, gensoft-freetype-2.10.1, gensoft-pcre-8.43, gensoft-xz-5.2.5, gensoft-tbb-2020.1, gensoft-zstd-1.4.4, gensoft-cern-root-v6.20.04, gensoft-curl-7.68.0, libbz2-1.0, gensoft-libpng-1.6.37, zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cnvnator-v0.3.3_1.0_amd64.deb
Size: 920270
MD5sum: ea8aaeb90cc3bc079da93cc06ee1b84e
SHA1: 4f0d57860de039fcdb26b8e34540a60346ee7988
SHA256: da86d720959c7c0616ead0f4c6c654aa469b857ca04ce8cdc01ff17dbafa68d6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CNV discovery and genotyping from read-depth (RD) analysis of personal genome sequencing.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cnvnator-v0.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4681
Depends: gensoft-libpng-1.6.37, gensoft-curl-7.68.0, gensoft-pcre-8.43, libssl1.1, zlib1g, libc6, gensoft-freetype-2.10.1, gensoft-tbb-2020.1, gensoft-cern-root-v6.20.04, gensoft-xz-5.2.4, gensoft-zstd-1.4.4, gensoft-lz4-1.9.2, libbz2-1.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cnvnator-v0.4.1_1.0_amd64.deb
Size: 1696650
MD5sum: add255cf259aefaeda9e5b11bec1f5ef
SHA1: 5a0a589e9903d13c3093446e1e3ba22b253e246b
SHA256: 7f549816abaece2c1ee7d0925c89bbeaabbbf9726f2307a7cb435e37c49462dd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CNV discovery and genotyping from read-depth (RD) analysis of personal genome sequencing.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cocoalib-0.99650
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 18163
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cocoalib-0.99650_1.0_amd64.deb
Size: 4984190
MD5sum: bdbe77e89b612c67efe6d7439b76df04
SHA1: 0169a7b8326673ac49491d3a70732b44a16b9ef7
SHA256: 125722ff5429424a384832b41ff646d32ee9c712e1b9ddef02857e535a07f1f3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CoCoALib is a GPL C++ library for doing Computations in Commutative Algebra
License: unknown
Vendor: Institut Pasteur

Package: gensoft-codonw-1.4.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2704
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-codonw-1.4.4_1.0_amd64.deb
Size: 84050
MD5sum: 1a1d9d6f3daf30b1c9d3c072cbe70da2
SHA1: 2ce879ddf2978dfa99e5b20a84ecda66be03116c
SHA256: bbff9de003c156e626cc761def3686f8c334d3e7fc4dba59b883d445b3fedad7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Simplify the Multivariate analysis (correspondence analysis) of codon and amino acid usage
License: unknown
Vendor: Institut Pasteur

Package: gensoft-coinutils-2.11.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2153
Depends: gensoft-lapack-3.9.0, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-coinutils-2.11.4_1.0_amd64.deb
Size: 808876
MD5sum: 472d229dfbf6ee2f21cd7fe4a276db17
SHA1: 317d6678eba509caad872b3ac767ec6b7c9183eb
SHA256: 0139e31637dac74654ca033371ada7777e9b8f99d6640a64dac81f8cd205c89d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CoinUtils (Coin-OR Utilities) is an open-source collection of classes and functions - classes for storing and manipulating sparse matrices and vectors, performing matrix factorization, parsing input files in standard formats, e.g. MPS, building representations of mathematical programs, performing simple presolve operations, warm starting algorithms for mathematical programs, comparing floating point numbers with a tolerance classes for storing and manipulating conflict graphs, and classes for searching and storing cliques and odd cycles in conflict graphs, among others
License: unknown
Vendor: Institut Pasteur

Package: gensoft-colate-0.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1689
Depends: libc6, gensoft-xz-5.2.4, gensoft-curl-7.68.0, libbz2-1.0, libssl1.1, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-colate-0.1.0_1.0_amd64.deb
Size: 622908
MD5sum: 98704452a4feaa6ed0acaf51de98c4bc
SHA1: d8331345772474b384e47cb2cf3837a00c5a28da
SHA256: 2a4f47bd216db5e037448d6c79e3cca0c26a43c3ff04d808d8aef07810da3b18
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Software for inferring coalescence rates for unphased, low-coverage genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-comalign-na
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 199
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-comalign-na_1.0_amd64.deb
Size: 74862
MD5sum: ea808af7cc2eb665c8032214421606f2
SHA1: cf7b71b3b4e2944cc207bc4bc20bc87488c2a5b6
SHA256: 4114c5bb47ffda5c2ad8af7ddab94205120523602526c6b6d37aacc248c3c5b7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Generates a number of heuristic alignments and combines these best possible
License: unknown
Vendor: Institut Pasteur

Package: gensoft-combat-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 193
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-combat-1.0_1.0_amd64.deb
Size: 77936
MD5sum: e3946c3573cbc76063a1102d5ac6c4f5
SHA1: f2c159d91f21a6030072700764befc93f1fc0092
SHA256: 3357dbf287d4d59855db80094e6318effebcba022013bd734688963f53c55ac9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The program combat implements the method for combined DNA/protein alignment
License: unknown
Vendor: Institut Pasteur

Package: gensoft-compostbin-0.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 17958
Depends: gensoft-xz-5.2.4, gensoft-libiconv-1.16, gensoft-adm-perl-5.30.1, libc6, gensoft-expat-2.2.9, gensoft-libxml2-2.9.10, gensoft-blat-36
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-compostbin-0.0.1_1.0_amd64.deb
Size: 4748988
MD5sum: 0932ce783fda48fe680ca5020fd17553
SHA1: e5ae3052f6adc56d8527986e18a86dc7eb788052
SHA256: cec0debd1f07ec0c465ffaf7d4d69626c3d41fa6d39359b6a594867826e5021d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CompostBin is a DNA-composition-based binning algorithm for classifying metagenomic reads. Unlike previous methods that seek to bin assembled contigs and often require training on known reference genomes, CompostBin has the ability to accurately bin raw sequence reads without need for assembly or training. (matlab part not installed)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-concaterpillar-1.8a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 177456
Depends: gensoft-adm-python-2.7.17, libc6, gensoft-raxml-8.2.12, gensoft-openmpi-4.0.5, libstdc++6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-concaterpillar-1.8a_1.0_amd64.deb
Size: 52503724
MD5sum: 8371c011266cd0b4cd0986a9fd8a3ca8
SHA1: 63269d6f000b2098e1c830d05b9cd17084eb6ddc
SHA256: b54679ea01bcb326a118ff270aad0a88f516fcd48a7905360a66a24ba064ffc0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: 1.8a Concaterpillar is a hierarchical likelihood-ratio test for phylogenetic congruence
License: unknown
Vendor: Institut Pasteur

Package: gensoft-concatfasta-1.00
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-concatfasta-1.00_1.0_amd64.deb
Size: 4278
MD5sum: 484ba50625f4dba2f0ada523f43a2881
SHA1: 688019b5664aad6beb6465beb61055eacbae5c8a
SHA256: d6ac503ebb674b3bd80015e7cb8513fa957b82842644a85cc6ae85e723921dac
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Concatenation of two fasta files with same identifier
License: unknown
Vendor: Institut Pasteur

Package: gensoft-concoct-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 393485
Depends: gensoft-mummer-3.23, gensoft-gsl-2.6, libc6, gensoft-samtools-1.10, libstdc++6, libgomp1, libgcc-s1, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-concoct-1.1.0_1.0_amd64.deb
Size: 121793394
MD5sum: 7bfb226fc184380322c4416ba8bfd81b
SHA1: 711588eed048287a01bb47def7a597bef4df8e02
SHA256: 4225d419826ed5681f805837fe5488f9c734967cf1d1e9273850c2344e925e58
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program for unsupervised binning of metagenomic contigs by using nucleotide composition, coverage data in multiple samples and linkage data from paired end reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-confindr-0.7.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 149869
Depends: libcrypt1, gensoft-bbmap-38.91, gensoft-minimap2-2.17, gensoft-adm-python-3.8.1, libgcc-s1, libc6, gensoft-mash-2.2, gensoft-kma-1.3.4, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-confindr-0.7.4_1.0_amd64.deb
Size: 44286928
MD5sum: 15fc4cd6facbe67cb3a60b6779c18f33
SHA1: e3a70e3d94562991873918f4cbd1e978d363507e
SHA256: f6ce2319a16242f9226610597f43b4b5977b64c4433f043ffe333e52ffe93e79
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Detect intra- and inter-species bacterial contamination in NGS reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-consed-26.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 41143
Depends: gensoft-phrap-1.090518, libc6, gensoft-adm-perl-5.30.1, gensoft-phred-071220.b
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-consed-26.0_1.0_amd64.deb
Size: 16627188
MD5sum: 620fb78a239956dde56071b151f07c48
SHA1: be59b911c88b4bc7e997935dbee97a5f7e88eb2b
SHA256: 76b80b4a74bf8419fc53e82b4d28f195a933737cacd3e89b2ac5bc09832416fa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A tool for viewing, editing, sequence assemblies created with phrap
License: unknown
Vendor: Institut Pasteur

Package: gensoft-consensus-2004-04-14
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 933
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-consensus-2004-04-14_1.0_amd64.deb
Size: 371420
MD5sum: 184538f78eb803997341f5f3c4184dcf
SHA1: 2892eb55825beaabb5af0c64b7baa5f9538261f3
SHA256: 06cb33a39bf6e0b499ff23c83db4a8acf38d2fb66a67a2cf89443ba443aedcc1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Programs are a collection of programs for determining and analyzing DNA and protein patterns describing functional elements
License: unknown
Vendor: Institut Pasteur

Package: gensoft-contig-extender-0.0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 108617
Depends: libc6, gensoft-bowtie2-2.3.5.1, gensoft-adm-python-3.8.1, libgcc-s1, zlib1g, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-contig-extender-0.0.1_1.0_amd64.deb
Size: 30942766
MD5sum: 75b3f4194e7a523685cb04cbc5fc863a
SHA1: 7b9f5eaf56218e95ac266ad57448e26592c3efbf
SHA256: 26ea30f4971a9bd7d1a9968fa4b5557e2601e7121ec8039049d191802cff8090
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: extend contigs, complementing de novo assembly. ContigExtender employs a novel recursive Overlap Layout Candidates (r-OLC) strategy that explores multiple extending paths to achieve longer and highly accurate contigs. ContigExtender is effective for extending contigs significantly in in silico synthesized and real metagenomics datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-contig-info-v2.01
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 45
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-contig-info-v2.01_1.0_amd64.deb
Size: 15548
MD5sum: a671a7e0342fe41c965e3efe31deb004
SHA1: 1f8864f8bd214f368e35171a266c170c21d7c302
SHA256: 31b13164db130b60685867c5bec70e910d78fdaec0216cc236f3c4235a81fc8b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: estimating several standard descriptive statistics from FASTA-formatted contig files inferred by de novo genome assembly methods
License: unknown
Vendor: Institut Pasteur

Package: gensoft-contiguator-v2.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 96310
Depends: gensoft-blast+-2.10.0, gensoft-adm-python-2.7.17, gensoft-mummer-3.23, libbz2-1.0, libc6, zlib1g, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-contiguator-v2.7_1.0_amd64.deb
Size: 25852526
MD5sum: 18a354d1ead4aa9d4943d7beeea47a1a
SHA1: 0f007e4600f1f1e5143a5cbf6c3334cd6dfd38c5
SHA256: e9807a7452d6ddc1cd7ad55e7c5b0bcd484ee0652b6b694926a253d95600fde0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for reordering assembled contigs/scaffolds against a finished reference genome sequence
License: unknown
Vendor: Institut Pasteur

Package: gensoft-convert3d-0.8.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 33420
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-convert3d-0.8.2_1.0_amd64.deb
Size: 10391298
MD5sum: a28bde25b3ce013a9c04a4bc4c93eb46
SHA1: 9ff7864f9d5f7683c2fbeed96b981ac9f41ee714
SHA256: e431664daa95e6ba88b09c47d7c01be1f0b230450df91906be49de497648c198
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: command-line tool to create image analysis pipelines
License: unknown
Vendor: Institut Pasteur

Package: gensoft-coordgenlibs-2.0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2997
Depends: gensoft-gcc-9.2.0, gensoft-boost-1.72.0, gensoft-xz-5.2.4, gensoft-zstd-1.4.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-coordgenlibs-2.0.3_1.0_amd64.deb
Size: 721842
MD5sum: c040398a26556a067c3150acc3ccc912
SHA1: f6f5edb6ccb23ce84e3facb8adb2ebdc582ce8fb
SHA256: 1efadb8ce4018308710e3aa2d935b305855cf4822e87f37ab086330175974fb9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Schrodinger-developed 2D Coordinate Generation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-copla-1.0
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 981975
Depends: gensoft-libsigc++-2.10.4, gensoft-xz-5.2.5, gensoft-adm-python-3.8.1, gensoft-cairomm-1.14.2, gensoft-fastani-1.33, gensoft-cairo-1.17.4, gensoft-prodigal-2.6.3.pp1, gensoft-fontconfig-2.13.91, gensoft-blast+-2.10.0, gensoft-icu-65.1, gensoft-freetype-2.10.1, gensoft-boost-1.72.0, gensoft-macsyfinder-1.0.5, gensoft-expat-2.4.1, gensoft-xorg-libs-1.1, gensoft-hmmer-3.3.1, gensoft-pixman-0.38.4, gensoft-gcc-9.2.0, libbz2-1.0, gensoft-libpng-1.6.37, libc6, gensoft-ruby-2.7.0, gensoft-parallel-20200222, gensoft-zstd-1.4.4, gensoft-gmp-6.2.0, gensoft-plasmidfinder-2.1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-copla-1.0_2.0_amd64.deb
Size: 195634646
MD5sum: 87267871f45143e1c1d88c3099d19feb
SHA1: 039d19e545cf971bb60dfe1392d84c797385f88d
SHA256: 502c771854d5ef579c4a27364b19ac090f375c1e2f2610d89eaae96a811081cc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an application for plasmid classification in Plasmid Taxonomic Units (PTUs).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-coral-1.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 407
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-coral-1.4.1_1.0_amd64.deb
Size: 140078
MD5sum: 33fa9ae78e5795d5552e953c0db035ad
SHA1: fbaa73294833022c815fb91fdb908306b62bdf76
SHA256: 5b83c932ce278a9a9e18301169659fc1cafb8e4de2f91bbdf8b126b98a6fe0e6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Coral is a program to correct sequencing errors in short-read high-throughput data, such as those generated by Illumina Genome Analyzer and Roche 454 Genome Sequencer.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cosa-na
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 27
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cosa-na_1.0_amd64.deb
Size: 8588
MD5sum: aa5df6e95012f9fa994c0f4590298e21
SHA1: 037454f0b5a7bfe38f851b051b2959f799b53e33
SHA256: 2bdaa8c2381d73300d14594e834372d26e5a72499b83da70a32009a9068c7ab4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Clustal Ouput Structural Analysis
License: unknown
Vendor: Institut Pasteur

Package: gensoft-count-2018-11-30
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3008
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-count-2018-11-30_1.0_amd64.deb
Size: 2780896
MD5sum: fc08d83b3ec20d19021a7b4abe654678
SHA1: 02579aa919c3cee8e0f1f6405f01e4848255caa4
SHA256: 86b81468396537a008771390c5ec287ad16ef0e21e4a05132da34ba1ef454696
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Count is a software package for the evolutionary analysis of homolog family sizes (phylogenetic profiles), or other numerical census-type characters along a phylogeny.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-coverm-0.6.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 13177
Depends: gensoft-dashing-v0.4.6, gensoft-samtools-1.10, libc6, gensoft-fastani-1.33, gensoft-minimap2-2.17, gensoft-gcc-9.2.0, gensoft-bwa-mem2-2.2.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-coverm-0.6.1_1.0_amd64.deb
Size: 4017602
MD5sum: 25106b33bca8b5cba56767584079a19b
SHA1: 274ba6143914d9dbf0cd7e2afba5d5ee4714b83c
SHA256: 2880052b400d52cfa726fc6dae55db45cbcba5a16bdbc8b01ed739247e501629
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Read coverage calculator for metagenomics
License: unknown
Vendor: Institut Pasteur

Package: gensoft-crac-2.5.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1456
Depends: libbz2-1.0, gensoft-htslib-1.10, gensoft-xz-5.2.4, libc6, zlib1g, gensoft-curl-7.68.0, gensoft-gzstream-1.5, libssl1.1, gensoft-gcc-9.2.0, gensoft-jellyfish-2.3.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-crac-2.5.0_1.0_amd64.deb
Size: 534890
MD5sum: ec7f942b0365ecd3259a6c42578690a1
SHA1: 68a215276d2afb606d18628dc093e8da41bba49c
SHA256: d198d4aa929ee92e891b091a5bbe45400be44384e1ef91107fa66c41c8b63f32
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool to analyze High Throughput Sequencing (HTS)), data in comparison to a reference genome
License: unknown
Vendor: Institut Pasteur

Package: gensoft-crass-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 15774
Depends: libc6, libssl1.1, gensoft-xerces-c-3.2.2, gensoft-curl-7.68.0, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-crass-1.0.1_1.0_amd64.deb
Size: 4616100
MD5sum: 47251218814fdc24495b5b6193f406fb
SHA1: 456a925fc93291e900fc7a09e06656aa70c0fd9a
SHA256: 85f6b97ddf3249c74256d98bae6b1d46751098d98f50bd4222af9428948f2f97
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Crass (The CRISPR Assembler) is a program that searches through raw metagenomic reads for Clustered Regularly Interspersed Short Palindromic Repeats
License: unknown
Vendor: Institut Pasteur

Package: gensoft-crisprcasfinder-4.2.20
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 46669
Depends: gensoft-libxml2-2.9.10, gensoft-libiconv-1.16, gensoft-macsyfinder-1.0.5, gensoft-vmatch-2.3.1, gensoft-emboss-6.6.0, gensoft-muscle-3.8.1551, gensoft-adm-perl-5.30.1, gensoft-xz-5.2.5, gensoft-prodigal-2.6.3.pp1, gensoft-expat-2.4.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-crisprcasfinder-4.2.20_2.0_amd64.deb
Size: 10564708
MD5sum: 59620a447c9f725342b79085ff4b2c40
SHA1: 223e234f2fea820050a89f57aba7a854e3e2a292
SHA256: 41fc6f249c3286367294dc0d2bb2a24b67620a24dd54e3d28fec53c2fbf9891e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CRISPRCasFinder is an updated, improved, and integrated version of CRISPRFinder and CasFinder.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-crisprcasidentifier-1.1.0
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 246834
Depends: gensoft-hmmer-3.2.1, libc6, libstdc++6, gensoft-prodigal-2.6.3.pp1, gensoft-adm-python-3.7.6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-crisprcasidentifier-1.1.0_2.0_amd64.deb
Size: 77889890
MD5sum: 90d62c87797f8a6e65ade6d366758394
SHA1: 1a69bb713b45c2fde5836c414fcf726e761dad69
SHA256: 6765004d6cbf955ff514f7f6ba45460455097e83e783aba9dc60b91db426bad2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CRISPRcasIdentifier is an effective machine learning approach for the identification and classification of CRISPR-Cas systems.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-crop-em-120305
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 68
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-crop-em-120305_1.0_amd64.deb
Size: 26264
MD5sum: 1ef1e8545f792b8a9bb41942146bd9e4
SHA1: d478fda49113836ee66033e9ff5e87e893166065
SHA256: c274900b9b6879ce208a3a0a194104e65883a19e4a635a8f0b67a8e8c8cb3db4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program for cutting sections out of 2D and 3D density maps
License: unknown
Vendor: Institut Pasteur

Package: gensoft-crop-v1.33
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1449
Depends: libc6, gensoft-gsl-2.6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-crop-v1.33_1.0_amd64.deb
Size: 847124
MD5sum: 433af2dbcd27c61c08ea31df28aca975
SHA1: 43b13ae3229cacb7cba32a978d6e88f0fd212546
SHA256: 04196a31f204e8e8a22931864c23ed4d3a62d5a799d256d4621ce9a3caf05426
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: clustering tool designed mainly for Metagenomics studies, which clusters 16S rRNA sequences into Operational Taxonomic Units
License: unknown
Vendor: Institut Pasteur

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Maintainer: edeveaud@pasteur.fr
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cryoef-1.1.0_1.0_amd64.deb
Size: 338894
MD5sum: 11049fe5caac8b225823bfe2c31512c6
SHA1: d2b83fea62db908285321eb6f0d3afcfe9883b1f
SHA256: 068685d65ffe88eeb78ec56911cd3c26957f7c93cb6052f1bafd8ed5f369ef10
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Measuring the effects of particle orientation to improve the efficiency of electron cryomicroscopy
License: unknown
Vendor: Institut Pasteur

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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-csa-0.1.12_1.0_amd64.deb
Size: 34335208
MD5sum: 24ca551afa3a5bec3c9853f1639b702f
SHA1: 5b4366b04d7f1336936113467b4a0161218f56d1
SHA256: 3f4cee36a15ad1867390b605443d38b3fad3f790cb762ca04218e1ad308f6275
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Connection-Set Algebra. The CSA library provides elementary connection-sets and operators for combining them. It also provides an iteration interface to such connection-sets enabling efficient iteration over existing connections with a small memory footprint also for very large networks. The CSA can be used as a component of neuronal network simulators or other tools.
License: unknown
Vendor: Institut Pasteur

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Maintainer: edeveaud@pasteur.fr
Installed-Size: 952
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ctffind-4.1.14_1.0_amd64.deb
Size: 434954
MD5sum: d30baaf32652388314ada671eca80f24
SHA1: d8ade9a3289481b9f5cd3bcfd9cad77c74576327
SHA256: 3925e03ac05983f31ee658c1892c7681aeb4e3768aab88bd383af61e0cbfb155
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: program for finding CTFs of electron micrographs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ctpl-0.0.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 20
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ctpl-0.0.2_1.0_amd64.deb
Size: 5270
MD5sum: d41dfcb6015ee3c8f6bfdba4436fcf29
SHA1: d199180bd9014960c5985405686b42a31b42a688
SHA256: abba8428fb1abfe25b2e032b7c1abc48a1d321fc889bc9160af52dd804247a7e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Modern and efficient C++ Thread Pool Library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cube-bundle4.0
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cube-bundle4.0_1.0_amd64.deb
Size: 153794440
MD5sum: 54d9c5da3d50a4808a24aa414747bc25
SHA1: b62fa5f4f08ac27c05c21df679f658bb029baa4d
SHA256: 9f42b20d2f10f84d531286b453ccbede60a4be678f4297d3e899c81e57e987bc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a generic tool for displaying a multi-dimensional performance space consisting of the dimensions (i) performance metric, (ii) call path, and (iii) system resource. bundle version 3.0 provides the following CubeLib 4.4.3, CubeGUI 4.4.3 and CubeW 4.4.2
License: unknown
Vendor: Institut Pasteur

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Maintainer: hpc@pasteur.fr
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cuda-10.2_1.0_amd64.deb
Size: 2200012172
MD5sum: 314dc028f41e726c1cf6e5d69588ec37
SHA1: bdc98ee87dc7f60619a11c44445871266e366c93
SHA256: 3effcb36bd7f323a98c16bcdcb844ac61b20b7974e49e3672c3f30c470139b0e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CUDA is a parallel computing platform and programming mode invented by NVIDIA
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cuda-11.1
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Architecture: amd64
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Size: 3430284282
MD5sum: bd9a667a5378183e701054ffedfef3b7
SHA1: 5556cc59a7481bed787c4d2b517f0e291b56a256
SHA256: 4325795ceb5d2facaa5d83cfd4205085b6e0343d26934a49c9911b269b8c49c4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CUDA is a parallel computing platform and programming mode invented by NVIDIA
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cuda-11.2
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cuda-11.2_1.0_amd64.deb
Size: 2925053152
MD5sum: 14bf335e4e8ff10d22df25ebad1dc00f
SHA1: 41dd50fe65c4abe92b4bbe5a38e398b4b8086b7f
SHA256: b568a443573e72491637408c0163061140e0baa42122051ff0b31248a10f601c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CUDA is a parallel computing platform and programming mode invented by NVIDIA
License: unknown
Vendor: Institut Pasteur

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Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 5476638
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Size: 2952561722
MD5sum: d1d526792b4e826f5dc1c69f39491324
SHA1: ac615ce26debb9011e28489bf630c581fa52c8e2
SHA256: ef94556c21ebde5164a839f20ddee072d2831be9c5745c19f062eb857cd3d2de
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CUDA is a parallel computing platform and programming mode invented by NVIDIA
License: unknown
Vendor: Institut Pasteur

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Size: 3081032278
MD5sum: 18dc582d2ffd57a8ff1a6db793ec0ecc
SHA1: d1bc4106bc31cd8dba69bdbf1a88c37765b81159
SHA256: ba89bff485dcf203914fad56a72e901785a396ccba200127d24712bcf18e430c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CUDA is a parallel computing platform and programming mode invented by NVIDIA
License: unknown
Vendor: Institut Pasteur

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Size: 3079559806
MD5sum: 3997ca4f240457d71bc5ae38404247d6
SHA1: 3c33e44cf5fe5c4a92ac2f846724055f76e15e40
SHA256: b0ef55856e457c2acd38ebeb0168387b0255f9a7cffa23f59bad41cd8a47eff7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CUDA is a parallel computing platform and programming mode invented by NVIDIA
License: unknown
Vendor: Institut Pasteur

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Architecture: amd64
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Size: 3882485742
MD5sum: 48c2e369d638b5e4853cf449ca0df2c7
SHA1: 816d3fac717ac84d855076338cc25ddd4e4244fd
SHA256: c6970967022055c44ff01478e290443fa71512b8f687459983639b88c4861dc1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CUDA is a parallel computing platform and programming mode invented by NVIDIA
License: unknown
Vendor: Institut Pasteur

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Size: 3744518962
MD5sum: 0e535f13f0f3ca4a7096df21dfceb6d8
SHA1: adc16955d115b9e5341947bf101f3b4113442dcb
SHA256: e987b5af829cb66a434e863a6bd193d296c0eea7b01930dbf4d6e06011a3ee01
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CUDA is a parallel computing platform and programming mode invented by NVIDIA
License: unknown
Vendor: Institut Pasteur

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Size: 548200846
MD5sum: 81fdff970b2537c6254b0562e24fc616
SHA1: 70fd879adf95ca304cfb07bd4ab0b776b1503e87
SHA256: b9d2519737dd50f7f108ee0663b0bf034205c5db9710f5c20b4fd1d219b5c05d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NVIDIA cuDNN is a GPU-accelerated library of primitives for deep neural networks.
License: unknown
Vendor: Institut Pasteur

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Size: 726852826
MD5sum: ac153ab859ad56df8b27df732e8605ce
SHA1: 5e911a04bdb981ee3bd38d915827c8dd37bfdfd9
SHA256: 002efd6864795c8bd26242222013e1d8b430fed006553e46dc2a747d94ea7d1f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NVIDIA cuDNN is a GPU-accelerated library of primitives for deep neural networks.
License: unknown
Vendor: Institut Pasteur

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Size: 726851184
MD5sum: 2cc6f6b8f7f4c179cb0a904c23a0af24
SHA1: c4f4c7e8d8e153b7239309ade4fcbf68cbdf4610
SHA256: 355f3b44789a4215eaa2ab6b898e7b6f64f5638460dd1d0c39b64407cc852ed4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NVIDIA cuDNN is a GPU-accelerated library of primitives for deep neural networks.
License: unknown
Vendor: Institut Pasteur

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Version: 1.0
Architecture: amd64
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Size: 728988096
MD5sum: 31fd129761719cafa410da673eb5e94b
SHA1: d132ab15d43580effb2b383335ff7fcc94eb8ba6
SHA256: d6ca36788e9e4cb62d75ae03afa8e671226a96bca55841b76fcaaddba1185b55
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NVIDIA cuDNN is a GPU-accelerated library of primitives for deep neural networks.
License: unknown
Vendor: Institut Pasteur

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Maintainer: edeveaud@pasteur.fr
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cufflinks-2.2.1_1.0_amd64.deb
Size: 83230828
MD5sum: 70ac34621796f66267874028446adda7
SHA1: 5467b8dc4f79ff39afdb2b9af3032a66ad07b254
SHA256: b820fc26c9a4d6968482318f9af36a8ad78abaf2b111a58e75198ec424f6c013
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cups-2.3.1
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Maintainer: edeveaud@pasteur.fr
Installed-Size: 8941
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cups-2.3.1_1.0_amd64.deb
Size: 4959342
MD5sum: 2281bc39549ed48a7e186e09f3c180f5
SHA1: 60906459c6082a6c8accb257413868c42c643163
SHA256: 511628d22e4283392309da8422089a75ece7a6be4aa609993f2df88ca043efb0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CUPS is the standards-based, open source printing system developed by Apple Inc. for macOS and other UNIX-like operating systems. CUPS uses the Internet Printing Protocol (IPP) to support printing to local and network printers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-curl-7.68.0
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3464
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-curl-7.68.0_1.0_amd64.deb
Size: 1013462
MD5sum: 364fa90ecb5d6c44d24ab7a5d302b910
SHA1: 7e77637a3c4c2b2a68c8e256a35f23847e44185c
SHA256: 92e43c960d153ab913c9d4f4c7c8509f898bb151c439233bba53281cf3bbe584
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: curl is an open source command line tool and library for transferring data with URL syntax, supporting DICT, FILE, FTP, FTPS, Gopher, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, POP3, POP3S, RTMP, RTSP, SCP, SFTP, SMB, SMTP, SMTPS, Telnet and TFTPA Massively Spiffy Yet Delicately Unobtrusive Compression Library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cutadapt-1.18
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Maintainer: hpc@pasteur.fr
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cutadapt-1.18_1.0_amd64.deb
Size: 6698142
MD5sum: e7d2ea99b01673c70853fe5c884fccaa
SHA1: 23606087ebe7dc033b768fc659157c2431ef62e3
SHA256: e114a6736a0d9cfa7b2ba33f4c4367f72677fc7f87f7a9d73f8e6c6d6fe74043
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: removes adapter sequences from high-throughput sequencing data
License: unknown
Vendor: Institut Pasteur

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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cutadapt-1.9.1_1.0_amd64.deb
Size: 6450404
MD5sum: f56c3083f2b6827024879016d4b4cb5f
SHA1: 52f97c1e9dd595c1e6e8318227c658e63a78129c
SHA256: a2d38ad8ac354b2d95ace1a86b6225955f9e807894ef48066c3060842f1c2464
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: removes adapter sequences from high-throughput sequencing data
License: unknown
Vendor: Institut Pasteur

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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 22418
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cutadapt-2.10_1.0_amd64.deb
Size: 7048786
MD5sum: 796be87bcc1042618361db779f4d5653
SHA1: 9d3941ab9ad5243c008d740db2a24368b0772c2c
SHA256: c35300ccb22ea5c61f9684ef4fe541dd84df23d33df3623f1ce447c823909ddf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: removes adapter sequences from high-throughput sequencing data
License: unknown
Vendor: Institut Pasteur

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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cuttlefish-2.0.0_1.0_amd64.deb
Size: 3177318
MD5sum: 00f8b001026ec0d023242ab508cca3f6
SHA1: 19d70369895c04eb802b8941677ddc666c37ea4d
SHA256: 1db5d52b9befc82409a48a97a90f6c41fbc29f09febc80140e2235c544c75c51
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a fast, parallel, and very lightweight memory tool to construct the compacted de Bruijn graph from sequencing reads or reference sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-cxxopts-3.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 64
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-cxxopts-3.0.0_1.0_amd64.deb
Size: 17566
MD5sum: 1688ed79d988140ad4911240deed6632
SHA1: 7e2999abbaa880dd4588550982d1134a9eede2d9
SHA256: 46ce0776f9cb15216e0d3f93d44f76706aba9c38cd2756868acfedda250978a9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Lightweight C++ command line option parser
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dalilite-v5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1304
Depends: libc6, gensoft-blast+-2.10.0, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5, zlib1g, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dalilite-v5_1.0_amd64.deb
Size: 572570
MD5sum: 2c4b3e2246dba86086fa0148d5d79958
SHA1: 9b4dcc5e633b424ae3aa11709ca7a995f6458d64
SHA256: 926c68ed6331e829ed9f8e9cc523eca6d6693da7b0f51e28b535e97476ac95a5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: program for protein structural alignment and structure database search. It is based on the Dali method
License: unknown
Vendor: Institut Pasteur

Package: gensoft-danpos-2.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 82382
Depends: gensoft-gcc-9.2.0, gensoft-xz-5.2.4, gensoft-pcre2-10.34, libtinfo6, gensoft-zlib-1.2.11, gensoft-pcre-8.43, gensoft-r-3.6.2, libreadline8, libc6, gensoft-atlas-3.10.2, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-danpos-2.2.2_1.0_amd64.deb
Size: 22709940
MD5sum: c84b22cd1b1466812846bc662d8f7256
SHA1: f5af70537945fabbce463118f7f28905c51b0ade
SHA256: d8c9f9fc86013cab570e1833a3c8ded7296c3c9534a199012353372aafc8ec69
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A toolkit for Dynamic Analysis of Nucleosome and Protein Occupancy by Sequencing, version 2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dapars-0.9.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 168090
Depends: gensoft-pcre2-10.34, libc6, gensoft-bedtools-2.29.2, libtinfo6, gensoft-adm-python-2.7.17, gensoft-pcre-8.43, gensoft-gcc-9.2.0, libgcc-s1, gensoft-r-3.6.2, gensoft-zlib-1.2.11, gensoft-atlas-3.10.2, gensoft-xz-5.2.4, libstdc++6, libreadline8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dapars-0.9.1_1.0_amd64.deb
Size: 50114742
MD5sum: 60944448fa3066f0dff82f5627d77b37
SHA1: de54d450ad2eeb10111e10ad160abe75521f1524
SHA256: c2ca4848d1f9cd7a05070465a1c402011c482c1d2d8db8d5e88cbcbc963b2658
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Dynamic analysis of Alternative PolyAdenylation from RNA-seq.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-darshan-3.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 118690
Depends: libc6, libbz2-1.0, gensoft-adm-perl-5.30.1, zlib1g, gensoft-adm-python-2.7.17, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-darshan-3.2.1_1.0_amd64.deb
Size: 38977398
MD5sum: 21d893d75a176385a6ea17d4158f3b0e
SHA1: ff990c4bfba35482e36266027902844a77964982
SHA256: 9fdccf013cbee1a146f2cb3e080504715d3cb438771ca8b23830539a16aad487
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Darshan, a scalable HPC I/O characterization tool. Darshan is designed to capture an accurate picture of application I/O behavior, including properties such as patterns of access within files, with minimum overhead.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-das-tool-1.1.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 137369
Depends: gensoft-pullseq-1.0.2, libc6, gensoft-r-3.6.2, gensoft-prodigal-2.6.3.pp1, gensoft-diamond-2.0.4, gensoft-ruby-2.7.0, zlib1g, gensoft-blast+-2.10.0, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-das-tool-1.1.2_1.0_amd64.deb
Size: 76070370
MD5sum: 677c153b2edf2ecf4eeb6a765f76a5a5
SHA1: cbe732ae5a03c555687936301d4a070556469ebe
SHA256: 221cb66ff68b2b784d1222cd640146b696672fb2191a1fe672bd0c4a52d51d64
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an automated method that integrates the results of a flexible number of binning algorithms to calculate an optimized, non-redundant set of bins from a single assembly. Installed with diamond as default search engine instead of usearch.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dash-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 386
Depends: gensoft-gcc-9.2.0, gensoft-plink-1.90b6.16, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dash-1.1.0_1.0_amd64.deb
Size: 110896
MD5sum: 47cc714007bc8f220ac8f90b8820d18d
SHA1: 95afdf16b01aec5fb6391ed3e233ee3816eff087
SHA256: 5cc92f42991e269501bc7613a83699c27a49eef6ed3ae45aed8de7993e5a78c3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DASH (DASH Associates Shared Haplotypes), that builds upon pairwise IBD shared segments to infer clusters of IBD individuals
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dashing-v0.4.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8993
Depends: zlib1g, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dashing-v0.4.6_1.0_amd64.deb
Size: 2902412
MD5sum: 20e78ab2466b551239c24ffe835f7075
SHA1: 37242f38c0e3d9cbc3f1d239c3feb6e57ef219d7
SHA256: 478a9e12634d68b0c64199f22be1166bf163bbec6703fe2cb1f3842ab40031fb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fast and accurate genomic distances using HyperLoglog
License: unknown
Vendor: Institut Pasteur

Package: gensoft-datamash-1.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3115
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-datamash-1.6_1.0_amd64.deb
Size: 1051704
MD5sum: 62af850cd407e64106a329537b8abdd7
SHA1: 92445ad07d03b5dbe7734bddd0d9ba5bf5e7b159
SHA256: 1e78e22f91e250d0e69e92143d51e72458cf3631f3081d295181b8998c2e1253
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GNU Datamash is a command-line program which performs basic numeric,textual and statistical operations on input textual data files.  it is designed to be portable and reliable, and aid researchers to easily automate analysis pipelines, without writing code or even short scripts
License: unknown
Vendor: Institut Pasteur

Package: gensoft-db-18.1.32
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 121781
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-db-18.1.32_1.0_amd64.deb
Size: 35811514
MD5sum: 092ce99f05d37046586dbd50ed3630a0
SHA1: 46c32f880b6cb1962d0da8686da1d44872fdac10
SHA256: 9f0187c545cff8d272e6aa4547a7cfb1db15c5527dd62fd9c20ca9d55fe63a75
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Berkeley DB is a family of embedded key-value database libraries providing scalable high-performance data management services to applications. The Berkeley DB package contains programs and utilities used by many other applications for database related functions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-db-5.3.28
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 112261
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-db-5.3.28_1.0_amd64.deb
Size: 32702310
MD5sum: 525989757b3614dc6ceb3015baa79b31
SHA1: 2ed6fa6108829bc9807aa93f7e36a9d766f7546f
SHA256: 707f5d91c494fd321bc3378264009b4fe61d1468370677f78d57f38a37796feb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Berkeley DB is a family of embedded key-value database libraries providing scalable high-performance data management services to applications. The Berkeley DB package contains programs and utilities used by many other applications for database related functions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dbgwas-0.5.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 152542
Depends: gensoft-zlib-1.2.11, gensoft-gmp-6.2.0, gensoft-r-3.6.2, libc6, gensoft-libxml2-2.9.10, gensoft-fontconfig-2.13.91, gensoft-libpng-1.6.37, gensoft-xz-5.2.4, gensoft-libiconv-1.16, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-freetype-2.10.1, gensoft-expat-2.2.9, zlib1g, gensoft-atlas-3.10.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dbgwas-0.5.4_1.0_amd64.deb
Size: 56934344
MD5sum: bc74c2b8fb91092c5f70047d2f6c0e30
SHA1: 0057b639570a12333f10c8f5ab519016f8b74e96
SHA256: fdff8f077809719247f3ea9c0dbcf83c255288f7daf10ca35a32932fb2660045
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DBGWAS is a tool for quick and efficient bacterial GWAS. It uses a compacted De Bruijn Graph (cDBG) structure to represent the variability within all bacterial genome assemblies given as input. Then cDBG nodes are tested for association with a phenotype of interest and the resulting associated nodes are then re-mapped on the cDBG. The output of DBGWAS consists of regions of the cDBG around statistically significant nodes with several informations related to the phenotypes, offering a representation helping in the interpretation. The output can be viewed with any modern web browser, and thus easily shared.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dbtools-0.99c
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 281
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dbtools-0.99c_1.0_amd64.deb
Size: 92758
MD5sum: 9e728936762054538f4b1925f107b4ed
SHA1: 73d5436b32c8836bdd02f23225e745b0f42ac443
SHA256: 68214da931dd62aea5eb65d3759594156e2e9199abd0a5188e1b2e73abe7572e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Small collection of programs to manipulate databanks files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dbus-1.13.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2104
Depends: gensoft-pcre2-10.34, gensoft-expat-2.2.9, libselinux1, libc6, libpcre3, gensoft-xorg-libs-1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dbus-1.13.12_1.0_amd64.deb
Size: 668842
MD5sum: c7af980814b57a6066277859e4101cc2
SHA1: 6533887652b8d14cbb5ad0a55a5ff9782cd6b424
SHA256: 780699c5ef6051055afe3cf726d79c1387fbe902c8a2b53af348418880471625
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: D-Bus is a message bus system, a simple way for applications to talk to one another. In addition to interprocess communication, D-Bus helps coordinate process lifecycle; it makes it simple and reliable to code a single instance application or daemon, and to launch applications and daemons on demand when their services are needed.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-deepsig-1.2.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1874431
Depends: zlib1g, gensoft-adm-python-3.8.1, libc6, libstdc++6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-deepsig-1.2.5_1.0_amd64.deb
Size: 656969484
MD5sum: 1a1f1da316bff87113756fd9e815d64e
SHA1: af5624f22fba9d364e4246b824ae21da92145eaf
SHA256: 3fc20c69dbe68df85081c6604e1a00b72e7963518e28a760b9e749273f98c2fe
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for the rapid & standardized annotation of bacterial genomes and plasmids from both isolates and MAGs. It provides dbxref-rich and sORF-including annotations in machine-readable JSON & bioinformatics standard file formats for automatic downstream analysis.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-deeptools-3.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 460219
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-deeptools-3.4.1_1.0_amd64.deb
Size: 163059236
MD5sum: 45a5c597ddf4f312b3da872ffe901e72
SHA1: f633fb49eb1e30089e9869b36c51cef3c88bd868
SHA256: 14ec037fe51ec234b6c47de00c6fd917e5f5aa56ff9c9bd561a889d1dc92e051
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: user-friendly tools for the normalization and visualization of deep-sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-deepvariant-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6686219
Depends: gensoft-singularity-3.7.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-deepvariant-1.1.0_1.0_amd64.deb
Size: 6829014272
MD5sum: d3ea3c6d176a39d78a1bfbd842ecc7c5
SHA1: d75c147da8e0b263a132426dcc1f24d948b3c8e0
SHA256: 9d2bbdfa0a9e6e316c94af952aca0b395705fc4d1f4490c08422963c48096279
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a deep learning-based variant caller that takes aligned reads (in BAM or CRAM format), produces pileup image tensors from them, classifies each tensor using a convolutional neural network, and finally reports the results in a standard VCF or gVCF file.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-deepvirfinder-1.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1754759
Depends: libgcc-s1, gensoft-adm-python-3.6.15, libstdc++6, gensoft-cuda-10.2, gensoft-gcc-9.2.0, gensoft-cudnn-10.2-v7.6.5.32, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-deepvirfinder-1.0_1.0_amd64.deb
Size: 566262322
MD5sum: 1e31b645a93278363d2877a092a71050
SHA1: 333bbbab818f7a1a400876cbc5f07f5a2f1ab8e4
SHA256: 0363acb528b147320bf2496156e0cd051c62e4d09f3bf02bd6d530846211a9c0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Identifying viruses from metagenomic data by deep learning
License: unknown
Vendor: Institut Pasteur

Package: gensoft-defense-finder-1.0.8
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 175618
Depends: libstdc++6, gensoft-hmmer-3.3.2, gensoft-adm-python-3.8.1, zlib1g, libgcc-s1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-defense-finder-1.0.8_1.0_amd64.deb
Size: 61415066
MD5sum: 2793858350d2b0f038b9267301605e58
SHA1: 809263fde59893d79f1965363c8343dbe9a2f64e
SHA256: 7a521f62c2439f518a7b6fa01fa01b0a9ad26ee2b5fbef792563bed22843c21f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DefenseFinder is a program to systematically detect known anti-phage systems
License: unknown
Vendor: Institut Pasteur

Package: gensoft-deformetrica-4.3.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 4594199
Depends: gensoft-singularity-3.8.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-deformetrica-4.3.0_1.0_amd64.deb
Size: 4688532404
MD5sum: 2d8f0c0f7b306f2a960b91a421d28f1e
SHA1: ccf34135cc0512033aa873b3fda2fba033e5c89e
SHA256: 00e56a488f8d9eb2a3d58e5b6490a78cdbe9d6352c4383cf5f21e71a0540806b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: software for the statistical analysis of 2D and 3D shape data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-delly-0.8.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 823
Depends: gensoft-xz-5.2.4, libc6, zlib1g, gensoft-curl-7.68.0, gensoft-boost-1.72.0, gensoft-zstd-1.4.4, gensoft-gcc-9.2.0, libbz2-1.0, gensoft-htslib-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-delly-0.8.2_1.0_amd64.deb
Size: 293962
MD5sum: 3d04d6d06f0b46da3b34f338c2b35465
SHA1: ea900c34c6a4b615927986ca66f21c78ad92d0d1
SHA256: a8c684fef629d2d92860d4ad42a54c9d096a84d39f941336bc26aa92cb9cfad4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an integrated structural variant prediction method that can detect deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-demuxlet-0.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5065
Depends: gensoft-xz-5.2.4, zlib1g, libbz2-1.0, gensoft-gcc-9.2.0, libssl1.1, libc6, gensoft-htslib-1.10, gensoft-curl-7.68.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-demuxlet-0.1.0_1.0_amd64.deb
Size: 1518900
MD5sum: 55887e654aaaea41fae1470c6a119a5e
SHA1: f09ba70ceb5a2ce869777cb6ea7026b99c07f607
SHA256: 1073a5e9109757bad79614315ee34c8aa3fc07f7498b658aaf7797797bfe527e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software tool to deconvolute sample identity and identify multiplets when multiple samples are pooled by barcoded single cell sequencing.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-desman-2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 435046
Depends: gensoft-adm-python-3.8.1, gensoft-r-3.6.2, gensoft-adm-perl-5.30.1, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-desman-2.1_1.0_amd64.deb
Size: 139504014
MD5sum: 9172f8b1af5997210eaa4b6fecf2d2cd
SHA1: 9d19c1bfe4266dc0b22063eeab8af994f99c56f9
SHA256: b52d242eb64358ed902733f4c00b01592b1d8db0794913e53a52ba1fde6703e7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: De novo Extraction of Strains from MetAgeNomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dialign-2.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 563
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dialign-2.2.1_1.0_amd64.deb
Size: 203708
MD5sum: 804506a01b7b8cb12c3247b1f859e23d
SHA1: 0c6a7a810ac2429e873957b0624bd8833c1e8c75
SHA256: dfef7d2443ae7bdf4b0bccc420b350bd2f054f88ad59fbcb8cb8e3680740eb2f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Program for multiple alignment
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dialign-tx-1.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4905
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dialign-tx-1.0.2_1.0_amd64.deb
Size: 1574728
MD5sum: 8ff2440c2ceb85c28e02b48344cb06bd
SHA1: a5b415c34d968108a4cdbf765a0c9159ba760c7a
SHA256: 526386b6e1c4b1cb07d2b3ac40899b4a71cf3c46f1e25c0073f353e835606c04
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: greedy and progressive approaches for segment-based multiple sequence alignment
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diamond-0.8.22
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 896
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diamond-0.8.22_1.0_amd64.deb
Size: 474598
MD5sum: 571d1adae4364b035ad51162abf212ec
SHA1: e0e21447d96c56c560ce107be4d66dbf39296a92
SHA256: cc3611f26f54dda2603a8e7cbc20743a676d0107e681957bb7fc2d92f7e078b0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diamond-0.8.29
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1009
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diamond-0.8.29_1.0_amd64.deb
Size: 524514
MD5sum: 3960869e2e3570bf96edddddb0f9c2f8
SHA1: 41aedf741053f4f3073f12692a852e4845d8bfae
SHA256: 6c8e11572dbb6d533a2b43f533523db6642f75d7e9a08f41106d96e3822d767c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diamond-0.9.19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1484
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diamond-0.9.19_1.0_amd64.deb
Size: 735746
MD5sum: fd7575a30143d4a12900164a9295850f
SHA1: cf142958c5f923e3c6e219cda6a5e10951ca9597
SHA256: a6efa73f001dc73d4666a04b038bc72ae50afd0f2dc8ff6f735a73d816709380
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diamond-0.9.30
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2303
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diamond-0.9.30_1.0_amd64.deb
Size: 1037506
MD5sum: 42543499a3b52a868569d1b15c89b25f
SHA1: 38065f33ab79bc2a864ad498648fa8b1909fbe12
SHA256: 3272b9bbdc290ce6c31b197000b956498eff1984776fc6fd9ec53f684f46074f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diamond-2.0.14
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 8336
Depends: zlib1g, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diamond-2.0.14_1.0_amd64.deb
Size: 2853070
MD5sum: 075b9691484e9c0be3df8f6bc72ae03b
SHA1: b94e15eaa86fb6321fb9482f7014a7bf799516cf
SHA256: 6a5d717c064094844614287226cd27d2d92364555974f02f1c0974ea903cf828
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diamond-2.0.15
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 29864
Depends: gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diamond-2.0.15_1.0_amd64.deb
Size: 10527764
MD5sum: c0663ff559e158d6f937167023967ec0
SHA1: 7128b2e8776799a2c8dd28855de974abe888567f
SHA256: 998d8355971f651176ca84d7931f906947cd1a39fb6eed157b953fd240b1b8fd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diamond-2.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3672
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diamond-2.0.2_1.0_amd64.deb
Size: 1487054
MD5sum: 68ef1cd7dc8e9527d7be62e517f9dd6c
SHA1: 9065213ae8c92c9d14717a654dac7ae5fd659053
SHA256: 352df0a7a17ff47dc69ce44e91f31122c62060867705bece192779d6468f84e2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diamond-2.0.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3578
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diamond-2.0.4_1.0_amd64.deb
Size: 1461442
MD5sum: 70de81b0412cb8484459f894cb06de5d
SHA1: fd4006a8caf58d039e0707beeab49707b791494c
SHA256: 362cfad3defcda8c9876976962fc85b91c484448786fe3a7885a9e15a8025382
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diamond-2.0.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4404
Depends: zlib1g, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diamond-2.0.6_1.0_amd64.deb
Size: 1866336
MD5sum: 9bf98153bdaaeec125a43628190c9ba0
SHA1: 00629f33b4531fdc65b035510d20e2c48e3d1bd1
SHA256: 09491b62ff4c1429a97da8544f72aacb2dcea8e41ef26d9929c2ea593a8fe76e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diffmap-120330
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 372
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diffmap-120330_1.0_amd64.deb
Size: 39512
MD5sum: e9896142c9c8593a5b568f605d196853
SHA1: bf6d47a38112bfbcb0a7f0473a6a9ce900703d50
SHA256: ae499bcd32f3a8ab4ad8e220b12024763a207e2c044a4ff06783aec5309a81cd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program to calculate difference maps between two density maps.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-diffreps-1.55.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 84960
Depends: gensoft-adm-perl-5.30.1, gensoft-bedtools-2.29.2, libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-diffreps-1.55.6_1.0_amd64.deb
Size: 20804056
MD5sum: e8c2b91e03815167ea226b0f63fc9e4a
SHA1: 6aefb961c72576958683819d7cc4b8a145a0b7f4
SHA256: b2baea2f0676720a699a5aec36cdbf009fd3f307da220df0ede63d4ebb201f0d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Differential analysis for ChIP-seq with biological replicates. This software is developed to find different peaks in ChIP-seq. It scans the whole genome using a sliding window, performing millions of statistical tests and report the significant hits. It takes into account the biological variations within a group of samples and uses that information to enhance the statistical power. Considering biological variation is of high importance, especiallly for in vivo brain tissues
License: unknown
Vendor: Institut Pasteur

Package: gensoft-digis-1.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 136965
Depends: gensoft-blast+-2.12.0, zlib1g, libc6, libgcc-s1, gensoft-adm-python-3.8.1, gensoft-hmmer-3.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-digis-1.2_1.0_amd64.deb
Size: 39717228
MD5sum: 6b1fd0c5c5fc35ff75ac9777b1bb7779
SHA1: 4cd8c22ab0dcb98d8b484a2e7987d4fcad9ef5f1
SHA256: 37958e02a699e3ad8a1b0dd7a5210644e61de4f6a044e4ca646c92d5caa1af08
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pipeline detecting distant and putative novel insertion sequences in prokaryotic genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dlib-19.19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 18991
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dlib-19.19_1.0_amd64.deb
Size: 3374562
MD5sum: 6ea75b1f1c9ae128985c5dd812b77842
SHA1: f2631b5bc8f96cb28fbfd9069d3e02366f72a439
SHA256: 6a99d0592a4e20ca0f02ae0504cc14fd63bc142767fa4a288f12fcb1ebf78769
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Dlib is a general purpose cross-platform open source software library written in the C++ programming language.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dmd-2.100.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 201001
Depends: libc6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dmd-2.100.2_1.0_amd64.deb
Size: 32362910
MD5sum: aca9031ba81736e4947d830b586aace4
SHA1: e8e24648b139992ad4b3beb81db95806b92beee2
SHA256: 4eaa5d41ad1b4a1e5cd89efda7f1732c9713513f91c7aa4ac7662269e8ddbd26
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DMD is the formal implementation of the D language. It is actively developed by the D community.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dmtcp-2.6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 228525
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dmtcp-2.6.0_1.0_amd64.deb
Size: 66636816
MD5sum: b9a2b430c2acc55fd73d60caedacfca3
SHA1: 45a034ea0bf0edc21780a51117a7d8221f419665
SHA256: 1abbc60d1f9f45e7b1fe265b0c745d2191c3208429b7921c6fc0857fe937ef2b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: DMTCP is a tool to transparently checkpoint the state of multiple simultaneous applications, including multi-threaded and distributed applications. It operates directly on the user binary executable, without any Linux kernel modules or other kernel modifications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dna-nn-0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 6285
Depends: libgcc-s1, zlib1g, libstdc++6, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dna-nn-0.1_1.0_amd64.deb
Size: 2371120
MD5sum: 55ea53e98a3b87b62dfdfec846020495
SHA1: 9f2cbd0ab6f0cc597d442e857fc2efd8d2f44507
SHA256: b23e225c0a59ac4120acfb4c41b216096ab3e635f4df093dfb00569250e60477
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Model and predict short DNA sequence features with neural networks
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dnaapler-0.3.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 215034
Depends: libgcc-s1, gensoft-blast+-2.13.0, gensoft-adm-python-3.8.1, libstdc++6, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dnaapler-0.3.1_1.0_amd64.deb
Size: 56950312
MD5sum: ad80fef3a7b772d04dcc4b7b84d9807e
SHA1: 90b1b684b28083b4a4e15a205e3cd7559e07902f
SHA256: d310f9a08bd1b5f93cf816dc449375c9263397f9707899399290d9b058ba07f3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a simple tool that reorients complete circular microbial genomes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dogpicker-0.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 176041
Depends: gensoft-adm-python-2.7.17, libgcc-s1, libc6, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dogpicker-0.2.1_1.0_amd64.deb
Size: 45984212
MD5sum: f9f64f2c226f4f69e4c0ad3da1153fe1
SHA1: afdba73fb92fe40acbdb10b720f98a82befe3658
SHA256: 944563f48008bd4db492365dd089dde200b1180a9b466866ed176527684b1afd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Particle picker that uses difference of Gaussians (DoG) for picking particles
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dorado-0.2.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 3755256
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dorado-0.2.1_1.0_amd64.deb
Size: 2138013828
MD5sum: ed0a4193ff473e9bb57ad999a02885e3
SHA1: 9dbebadc0bbddfa278a6ad9e327aacb5e0d8a553
SHA256: 13236f0f865647dccba0ec4b2d9bcd2bbd1207cc293950c43aa74dead3e067fa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dorado-0.2.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 4706424
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dorado-0.2.3_1.0_amd64.deb
Size: 2683731502
MD5sum: 1677f2a624ed80933fb1c7545c614fe6
SHA1: 821240f80f2e7fc23afa2e9a210916af47869d44
SHA256: 413f15104508a48ed44b4f005944507664e942da2ed61a439afc70b2cd2bdecf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dorado-0.3.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 4063389
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dorado-0.3.0_1.0_amd64.deb
Size: 2269305238
MD5sum: a519dfd070468378a0182621f0406044
SHA1: 167b3350f8ccac96cdcc9738c60243a37d1b3a7b
SHA256: 411f711071da76c1823da55185611525f7a64e9af322694b901374fed685efc2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-doxygen-1.8.17
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 16927
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-doxygen-1.8.17_1.0_amd64.deb
Size: 4794412
MD5sum: 61be2a1cd234696f0f9add5e1d5e4011
SHA1: 4584397e53c791138107d46d8de7bba3b90b32dd
SHA256: a898fa2d86b4427030045b2b7c56b2b982683f43d442da0e68792ffceee6e83b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Doxygen is the de facto standard tool for generating documentation from annotated C++ sources, but it also supports other popular programming languages such as C, Objective-C, C\#, PHP, Java, Python, IDL (Corba, Microsoft, and UNO/OpenOffice flavors), Fortran, VHDL, Tcl, and to some extent D.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-doxygen-1.8.20
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20598
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-doxygen-1.8.20_1.0_amd64.deb
Size: 5593242
MD5sum: bb531a45980dff01469ecc5674fc239b
SHA1: 4d834abe310fe7b2570d71e11c361433d9dbbb34
SHA256: 6469c7d62f11c63d3fd96f878994d816be99b3ba14ee6ecf7a736e7ac6564749
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Doxygen is the de facto standard tool for generating documentation from annotated C++ sources, but it also supports other popular programming languages such as C, Objective-C, C\#, PHP, Java, Python, IDL (Corba, Microsoft, and UNO/OpenOffice flavors), Fortran, VHDL, Tcl, and to some extent D.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-drep-3.2.2
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 362692
Depends: zlib1g, libc6, gensoft-checkm-1.1.3, gensoft-anicalculator-v1, gensoft-prodigal-2.6.3.pp1, gensoft-adm-python-3.8.1, libgcc-s1, gensoft-mummer-3.23, gensoft-qsimscan-1.0, libstdc++6, gensoft-fastani-1.33, gensoft-mash-2.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-drep-3.2.2_2.0_amd64.deb
Size: 115422672
MD5sum: 09e4e68ad39e132948e5199d0cd3c681
SHA1: 6c552dc0ac048ffeebda43caeecae015805659b1
SHA256: 1c8c2df40e046f2fe06263dbabb53652cced1ef2fd276723738dcfe9656c90bf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: program for rapidly comparing large numbers of genomes. dRep can also de-replicate a genome set by identifying groups of highly similar genomes and choosing the best representative genome for each genome set.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dsk-1.6906
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 158
Depends: gensoft-gcc-9.2.0, zlib1g, gensoft-adm-python-2.7.17, libc6, gensoft-r-4.1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dsk-1.6906_1.0_amd64.deb
Size: 70124
MD5sum: b9c7f0800849c9a1cf2347f60a487cdd
SHA1: 988eb4733d895bc5db1dbbf4622650167d9d2b27
SHA256: f674f58892d7d684931b13a28544abe53f1b827b4cbb375ae72e2962019558bf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a k-mer counting software
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dsm-framework-bioinformatics2014
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7147
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dsm-framework-bioinformatics2014_1.0_amd64.deb
Size: 2148012
MD5sum: 36be95792e611a248e67abaf78b0a12c
SHA1: a3b78294e3b0f7abc4ffc6ec77953f372aa34a46
SHA256: 8f15627a486cd02ff791c64ad4c09847b1cd5c1e74717dc2f91cbf46b3331e49
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Distributed String Mining Framework
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dsrc-1.02
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 219
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dsrc-1.02_1.0_amd64.deb
Size: 98828
MD5sum: 83e0313753c2e518c5098bc0af4dc30a
SHA1: 268414a1417d83810183beff2fbd0df3ebeba8e9
SHA256: 17dd9b516ffefa32f0bace2813df5341057880acbd206f7670b10ef1a221efcb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an application designed for compression of data files containing reads from DNA sequencing in FASTQ format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dsrc-2.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 335
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dsrc-2.0.2_1.0_amd64.deb
Size: 115970
MD5sum: f165d2378df470dc6128668246b6135a
SHA1: d4162a795987e73a0f8c3700ce0bd6a7449d7d80
SHA256: 1c72c41f15dd271bc2368e9806235d1a9948fa6b0efb673f1cda37c580212be0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an application designed for compression of data files containing reads from DNA sequencing in FASTQ format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dssp-2.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13028
Depends: gensoft-xz-5.2.4, zlib1g, gensoft-zstd-1.4.4, gensoft-gcc-9.2.0, gensoft-boost-1.72.0, libc6, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dssp-2.2.1_1.0_amd64.deb
Size: 3466152
MD5sum: 640c2ec5fac1d508d7849751746eda57
SHA1: 1444b6956b9160b6c51b7dee63bd7a88c7f1ce60
SHA256: 176467d7f00f25bd96d0b74574f115592f56a93c02c8d57f39207e37b7d08355
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Definition of secondary structure of proteins given a set of 3D coordinates
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dssp-2.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13388
Depends: gensoft-xz-5.2.4, zlib1g, libbz2-1.0, libc6, gensoft-zstd-1.4.4, gensoft-boost-1.72.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dssp-2.3.0_1.0_amd64.deb
Size: 3541374
MD5sum: a9b7496f7dd061338d066e5d59bbee66
SHA1: 6e659c159ae0fc82e0a024cc59daa84da80dcb9a
SHA256: b7ffead05618bcfde99722297d2620f09236d4567fd658fc20f85efb39a78e3f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Definition of secondary structure of proteins given a set of 3D coordinates
License: unknown
Vendor: Institut Pasteur

Package: gensoft-dylp-1.10.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 977
Depends: gensoft-osi-0.108.6, gensoft-gcc-9.2.0, libc6, gensoft-coinutils-2.11.4, gensoft-lapack-3.9.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-dylp-1.10.4_1.0_amd64.deb
Size: 408026
MD5sum: 369fc781835dc6328360813d460c307a
SHA1: 39d97018df6c2f6e54ca385d4212bd3fea40d6f5
SHA256: 1ce62bb159443921092887f0ea05ed83edd9aacc853f7f228ebc811efee70094
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: dylp is an implementation of the dynamic simplex algorithm.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ea-utils-1.1.2-806
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 75794
Depends: gensoft-r-3.6.2, gensoft-gcc-9.2.0, gensoft-libpng-1.6.37, zlib1g, libc6, gensoft-adm-perl-5.30.1, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ea-utils-1.1.2-806_1.0_amd64.deb
Size: 42448646
MD5sum: b6a683ad65c98e8cc6436fc9625b3356
SHA1: 566c7da8f7f5c4d720d9ac538967280b927a68b4
SHA256: 1d7fe830567cf1daf111eabd1df100aded13efbad8e38269ce06c1bc7a739365
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Command-line tools for processing biological sequencing data. Barcode demultiplexing, adapter trimming, etc. Primarily written to support an Illumina based pipeline - but should work with any FASTQs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-echo-1.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 189398
Depends: gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-echo-1.12_1.0_amd64.deb
Size: 51818458
MD5sum: e0935b18c8e011215a7f0fd3be97d2f6
SHA1: c1b68a5e55b69cb11c44a8478fb17e1b40d8aca7
SHA256: 5bf7b0f92891debc951705c5fd0db88b2818508d60c6b26a790763d51553ae0c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an error correction algorithm designed for short-reads from next-generation sequencing platforms
License: unknown
Vendor: Institut Pasteur

Package: gensoft-edirect-18.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 25584
Depends: gensoft-expat-2.4.1, gensoft-adm-perl-5.30.1, libc6, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-edirect-18.2_1.0_amd64.deb
Size: 14324280
MD5sum: be59b782e0a71fa99134b10bfed4b5b5
SHA1: 40c0ef4dd46dc1b9de33816f87c79fb6691e9d2c
SHA256: 64a814035323fa02ef9ad72f0479618bdbece411cd2dae5fbe0970fd642f8923
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Entrez Direct (EDirect) is an advanced method for accessing the NCBI s set of interconnected databases (publication, sequence, structure, gene, variation, expression, etc.) from a UNIX terminal window. Functions take search terms from command-line arguments. Individual operations are combined to build multi-step queries. Record retrieval and formatting normally complete the process.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-efasta-1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3563
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-efasta-1.2_1.0_amd64.deb
Size: 1132570
MD5sum: 4f9a7a33b22f9b3597f04c6ac421aa55
SHA1: 73ba108f49dcda8ccd5b7a572393e8f8e77e81ed
SHA256: 28fd34cff31ec961bc29da22e3f429a8610ba868f8eff367d5d1b04adcec47df
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: extracting nucleotide segments from FASTA file
License: unknown
Vendor: Institut Pasteur

Package: gensoft-egglib-3.0.0b21
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6511
Depends: libc6, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-egglib-3.0.0b21_1.0_amd64.deb
Size: 4469364
MD5sum: d2e89425be0354e55a15371755b78c30
SHA1: 7c892b402368dde611959932b2d8d38841e6f3bc
SHA256: 6e36d54cbeeb96eb99988e47998cf6b4e026b91604d59e24e4bb523b20695c94
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: EggLib is a C++/Python library and program package for evolutionary genetics and genomics. Main features are sequence data management, sequence polymorphism analysis, and coalescent simulations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-eggnog-mapper-1.0.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 7802
Depends: gensoft-diamond-0.8.22, libc6, gensoft-hmmer-3.3, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-eggnog-mapper-1.0.3_1.0_amd64.deb
Size: 2382788
MD5sum: 413fb385cc736b6b5e1fc06f26cc49ae
SHA1: b010fe351b2c6e978365cdcbec81f207b9117abd
SHA256: a22fc9637d28e9c6c35003bca50ab9a8c334c408431b214ccb8355fb39559f15
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: eggnog-mapper is a tool for fast functional annotation of novel sequences (genes or proteins) using precomputed eggNOG-based orthology assignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-eggnog-mapper-2.1.0.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 79648
Depends: gensoft-adm-python-3.8.1, gensoft-mmseqs2-13-45111, gensoft-hmmer-3.3, gensoft-prodigal-2.6.3.pp1, gensoft-diamond-2.0.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-eggnog-mapper-2.1.0.1_2.0_amd64.deb
Size: 22434298
MD5sum: cb2d1137830ccf4913d607abaf7a960b
SHA1: a36ec32e536333c9b8f3fd53d3c41ca4a5078c83
SHA256: aecfbd7d91cd3886ea16c98f1a9073255d11f4e991699f549de1d6dd433ce69d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: eggnog-mapper is a tool for fast functional annotation of novel sequences (genes or proteins) using precomputed eggNOG-based orthology assignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-eggnog-mapper-2.1.12
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 96587
Depends: gensoft-hmmer-3.4, wget, gensoft-adm-python-3.8.1, gensoft-mmseqs2-15-6f452, libgcc-s1, gzip, gensoft-prodigal-2.6.3.pp1, libc6, zlib1g, tar, gensoft-diamond-2.0.15
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-eggnog-mapper-2.1.12_1.0_amd64.deb
Size: 28220552
MD5sum: 64be56c65800e17fca31443e0f2b5364
SHA1: 5176643159ccdfe27487e39fd0564a2e2bd92db5
SHA256: 14a78bfa02629700db0ba77c03f58cc3c8344f7a05571fc8b6ff7934e257e5bf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: eggnog-mapper is a tool for fast functional annotation of novel sequences (genes or proteins) using precomputed eggNOG-based orthology assignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-eggnog-mapper-2.1.9
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 80464
Depends: wget, gensoft-hmmer-3.3.2, gensoft-mmseqs2-13-45111, gensoft-prodigal-2.6.3.pp1, gzip, libgcc-s1, libc6, gensoft-adm-python-3.8.1, zlib1g, tar
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-eggnog-mapper-2.1.9_2.0_amd64.deb
Size: 22589630
MD5sum: d9c197769314ca746fa8f245c05ee016
SHA1: 7832b87d391abc9df62d2b75be1e582c329086ca
SHA256: 1cadca796df98188d2dea0791129c440072d7748e04e0aa5e3486adaae575ecd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: eggnog-mapper is a tool for fast functional annotation of novel sequences (genes or proteins) using precomputed eggNOG-based orthology assignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-eigen-3.3.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6602
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-eigen-3.3.7_1.0_amd64.deb
Size: 1163982
MD5sum: cca42c88823fc229bfd2eb51a70086f5
SHA1: a29f761389175260c5f0178732913ae828149c68
SHA256: b5bd1d00909490667870b3ae3881c79fb2aa9145ed60fed183e7b445a1934c29
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ template library for linear algebra matrices, vectors, numerical solvers, and related algorithms.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-eigen-3.4.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 8474
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-eigen-3.4.0_1.0_amd64.deb
Size: 1484606
MD5sum: 178bab226b4033ecda9295fc9ec54528
SHA1: 125afeb3422a39fd8bdf810ec73847bca2af32c2
SHA256: 20a7a99ab9ee8350b9f9d62802b5fcc8273dc8cf2f09466ecceae4da39de21c3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ template library for linear algebra matrices, vectors, numerical solvers, and related algorithms.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-eigensoft-6.1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8147
Depends: gensoft-adm-perl-5.30.1, gensoft-gnuplot-5.2.8, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-eigensoft-6.1.4_1.0_amd64.deb
Size: 2413950
MD5sum: bbe6edd919814815c2d0998ed7208e62
SHA1: fb9c784f8848989eeee00fe5195b7d7cc32cceae
SHA256: f019c4f3b68127101f1e8450f2343f0774205637186884ada557f6c6af5d17b0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The EIGENSOFT package combines functionality from population genetics methods (Patterson et al. 2006) and EIGENSTRAT stratification correction method (Price et al. 2006).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-eigensoft-7.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2721
Depends: gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, libc6, gensoft-openblas-0.3.7, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-eigensoft-7.2.1_1.0_amd64.deb
Size: 982106
MD5sum: f8ee700636be94064af54361182d7e74
SHA1: 9d547fb9257c8d51a46963eeac2a96bddcebbacc
SHA256: b5aa68120d47390662f97d35be6148d219d1076a48ec2a9449967d9093d212e6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The EIGENSOFT package combines functionality from population genetics methods (Patterson et al. 2006) and EIGENSTRAT stratification correction method (Price et al. 2006).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-elfio-3.9
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 205
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-elfio-3.9_1.0_amd64.deb
Size: 41124
MD5sum: 135dd2fc64f624da9df63ea18dde0181
SHA1: 727a17dfe7f2bc241feba3e20289dedb19144e56
SHA256: 2359e6683dc7bfa127c8290e6aa4dfc0f293d3789d12a9c59cc5168e8b65e204
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ELF (Executable and Linkable Format) reader and producer implemented as a header only C++ library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-elp-3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 113214
Depends: gensoft-mfold-util-4.6, gensoft-unafold-3.8, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-elp-3.0_1.0_amd64.deb
Size: 37276470
MD5sum: 0e1049c46da9073526d34d030ba19aaf
SHA1: 1d58b0933b0f3addc9612a36aacf8bb28e44b583
SHA256: 77a7e2f433e83f36ef1bac4e45b965a8c0518ebfe09aaf0625423e205b708b83
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Compute synonymous sequences that maximize protein evolutionary landscape exploration
License: unknown
Vendor: Institut Pasteur

Package: gensoft-elph-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 299
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-elph-1.0.1_1.0_amd64.deb
Size: 115676
MD5sum: 36cb4271f0fb645bac50c4e5c06fd2cd
SHA1: 2f0b72baf31e2a97ece59c2a8f676113a52a7318
SHA256: ab8d23082cbe6e209b21630eb854c2cd225ffb0feeaf7d2cdabc2f48116c9fa5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-embfactor-may2014
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1921
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-embfactor-may2014_1.0_amd64.deb
Size: 894254
MD5sum: d33bc7cad06eab4ba88aee35ef602051
SHA1: 2b100ada0ab7e20dab856842c6ab8ae24429fb6e
SHA256: 2958d13cd77b9a2b8b76c6891dbcafdf58ea19d68d655a95b5ae107e73f1da91
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-emboss-6.6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 519946
Depends: gensoft-libtiff-4.1.0, gensoft-libjpeg-turbo-2.0.4, zlib1g, gensoft-expat-2.2.9, gensoft-golden-3.4.1, gensoft-libpng-1.6.37, gensoft-freetype-2.10.1, gensoft-xorg-libs-1.1, gensoft-fontconfig-2.13.91, gensoft-clustalw-2.1, gensoft-graalvm-ce-java8-20.0.0, gensoft-libgd-gd-2.2.5, libbz2-1.0, csh, gensoft-xz-5.2.4, libc6, gensoft-primer3-2.4.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-emboss-6.6.0_1.0_amd64.deb
Size: 114399630
MD5sum: bdb68a8036f8b33cbaf6b863837bcbbc
SHA1: 298e6c001a760bf5015ebbf370c159082c8964ca
SHA256: fb831caa8e4b312f2f340fc5666c6cf65a4cbccf9f9e36251dcc09a2e0de0ed5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: European Molecular Biology Open Software Suite
License: unknown
Vendor: Institut Pasteur

Package: gensoft-emmax-beta-07mar2010
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3017
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-emmax-beta-07mar2010_1.0_amd64.deb
Size: 523384
MD5sum: 9fcc31538763b0b82974f9585ec9ab9c
SHA1: 81807d765274cdf7d385352edd5cb487f443eea1
SHA256: 40a570c1d73c54ffe2cf2e46d21a351d0adf15fcd7619db3f2fdb2955ec1ebe6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: statistical test for large scale human or model organism association mapping accounting for the sample structure
License: unknown
Vendor: Institut Pasteur

Package: gensoft-epa-ng-0.3.8
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 8170
Depends: gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-epa-ng-0.3.8_1.0_amd64.deb
Size: 3149400
MD5sum: 34fac579a2c15f89f33d4e4c7bb6e2e7
SHA1: 7fdda36300375ea85ad7693ecd897720edf06281
SHA256: 799a353576988bbd9a810dfb6cc405fe2809d9a1fd2e2588522ec806c4de4358
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fast, parallel, highly accurate Maximum Likelihood Phylogenetic Placement
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ete-3.1.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 300452
Depends: gensoft-fasttree-2.1.11, gensoft-dialign-tx-1.0.2, gensoft-kalign-2.04, gensoft-ruby-2.7.0, gensoft-fasta-3.8h, libbz2-1.0, gensoft-lapack-3.10.0, gensoft-adm-python-2.7.17, libc6, gensoft-clustal-omega-1.2.4, gensoft-phyml-3.3.20190909, gensoft-adm-python-3.8.1, gensoft-trimal-1.4.1, zlib1g, gensoft-raxml-8.2.12, gensoft-mafft-7.467, gensoft-iq-tree-2.0.6, gensoft-muscle-3.8.31, gensoft-gcc-9.2.0, gensoft-paml-4.9j
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ete-3.1.2_1.0_amd64.deb
Size: 99718564
MD5sum: 1b1970f28181e02b5281e2ff0f52e444
SHA1: fb03ace17e40dcd5cdca55ff6fcfbd048a3f5e67
SHA256: a330a5b6993d0abd26bbea581104d24cfc879a2979ac244fd78f87b2f7ad7d0b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a collection of command line tools to run common operations in phylogenetics and comparative genomics
License: unknown
Vendor: Institut Pasteur

Package: gensoft-evaporativecooling-2009-03-25
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9644
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-evaporativecooling-2009-03-25_1.0_amd64.deb
Size: 4866856
MD5sum: 920158e8c356575bf333130effdea46c
SHA1: c4bbac2e8c7799bf7ddf7d2aa7c1509bcd80d415
SHA256: 955df82794174c8bac3681edd42a92ce809104f91f4f094afc72347a100ab677
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program for filtering genetic association data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-evince-3.36.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 137548
Depends: gensoft-singularity-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-evince-3.36.7_1.0_amd64.deb
Size: 139428550
MD5sum: 8d61a4187f14f0f53cbe5ad4018073c1
SHA1: 7c85db97d3742a2758f462c6f123c3ddc785a402
SHA256: 2a2932f5bd17f0964b1aa5dc4aaf611c5f956fb3f302a43b93a11913437f81d2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Evince is a document viewer for multiple document formats. Evince is specifically designed to support the file following formats - PDF, Postscript, djvu, tiff, dvi, XPS, SyncTex support with gedit, comics books (cbr,cbz,cb7 and cbt).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-exonerate-2.4.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20545
Depends: gensoft-glib-2.58.3, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-exonerate-2.4.0_1.0_amd64.deb
Size: 7639844
MD5sum: 3be08d5a90978396031c388395275d26
SHA1: 957d371c4a35b667231427a4b6fba5507c6e2210
SHA256: 4f26acae664bcb5e9eefd68cdb38ef3a4d4a592bbf11dab5ccb33f8416bea48b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a generic tool for pairwise sequence comparison.  It allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-expat-2.2.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1809
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-expat-2.2.9_1.0_amd64.deb
Size: 540004
MD5sum: 93f905731db6fad20206c9a89fc30edc
SHA1: 3baa7110b69c063ccb09cbde4453704c4a979144
SHA256: a371eb5f7ebe6a838bdb933b29a089860428b270d9989053d210a01834da2e6b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Expat is an XML parser library written in C. It is a stream-oriented parser in which an application registers handlers for things the parser might find in the XML document
License: unknown
Vendor: Institut Pasteur

Package: gensoft-expat-2.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1991
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-expat-2.4.1_1.0_amd64.deb
Size: 595782
MD5sum: 19edc4b8fd2f0cbc61468e2888ba504e
SHA1: 0bd2c16766baaed7a3ff0e02be468a895272203a
SHA256: e3e2521a7e2f5cb36f4af038e69cf8c0483c2b3ef8fa7d712a1bace6de1c5fb7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Expat is an XML parser library written in C. It is a stream-oriented parser in which an application registers handlers for things the parser might find in the XML document
License: unknown
Vendor: Institut Pasteur

Package: gensoft-express-1.5.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 28431
Depends: gensoft-gcc-9.2.0, libc6, zlib1g, gensoft-libbam-2.5.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-express-1.5.3_1.0_amd64.deb
Size: 7975862
MD5sum: 87d7e0c5fb47b0c243f5b83b0f8d060d
SHA1: a565b6f8661643548fd52f63a61ad565f0a1edb1
SHA256: 31dd26f8a30ea8a1a6c9281384b94a6297f9d22d215c4650f08536842da5ef68
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a streaming tool for quantifying the abundances of a set of target sequences from sampled subsequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-extend-align-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 198065
Depends: gensoft-adm-python-2.7.17, libgcc-s1, libstdc++6, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-extend-align-1.0_1.0_amd64.deb
Size: 59102252
MD5sum: 3474af22efbe13c42991a244b2676c93
SHA1: 7e04efb86be5c3aacdd2cc405385065ccc8b717f
SHA256: 411b168a8ac4148c16335a05ffcfde3f68af5f59f71a53e8cf7a8ead631c6f56
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: concatenate several alignments from several files (one per file )
License: unknown
Vendor: Institut Pasteur

Package: gensoft-extract-genes-abricate-2022-02-08
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 142485
Depends: libc6, gensoft-adm-python-3.8.1, libgcc-s1, zlib1g, gensoft-seqtk-1.3, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-extract-genes-abricate-2022-02-08_1.0_amd64.deb
Size: 42988162
MD5sum: 52f01b4cbf2c5cf7c575f465477b2a24
SHA1: e040494f232070e06bf75b7c2bae7ffd8dcbccb9
SHA256: 0e1e992c236173a21957c6a1d3bde15c5f08d179dfffc311fd42ab44d71ede12
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Small script to use ABRicate output to extract genes from genome assemblies, reverse complement if necessary, and print to a file
License: unknown
Vendor: Institut Pasteur

Package: gensoft-extractcds-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3
Depends: gensoft-libiconv-1.16, gensoft-expat-2.2.9, gensoft-adm-perl-5.30.1, libc6, gensoft-libxml2-2.9.10, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-extractcds-1.0_1.0_amd64.deb
Size: 2798
MD5sum: 116761d911cbbef58d4986ec1da4101d
SHA1: 81a4965e216b0d2a8c6b44265a065af247cfe3e9
SHA256: 20034ad1d319c22a42eb298128dfc83faa8d73083a2297950b495dffbb878240
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Extracts translation(s) from a Genbank or Embl entry
License: unknown
Vendor: Institut Pasteur

Package: gensoft-extrae-3.7.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 523574
Depends: gensoft-extrae-3.7.1, zlib1g, gensoft-libxml2-2.9.10, gensoft-openmpi-4.0.5, gensoft-gcc-8.4.0, libc6, gensoft-papi-5.7.0, gensoft-libunwind-1.3.1, gensoft-libiconv-1.16, gensoft-binutils-2.33.1, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-extrae-3.7.1_1.0_amd64.deb
Size: 147800268
MD5sum: af314532793f67a074a212372ecfaaa2
SHA1: ece19bc35a5d504bf3211aaac63d15c5b80e1ba5
SHA256: 06fd2bde80463b979c766f29aafffc861479f56871fd51f4c9d2c954d99ec5e2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Extrae is the package devoted to generate Paraver trace-files for a post-mortem analysis. Extrae is a tool that uses different interposition mechanisms to inject probes into the target application so as to gather information regarding the application performance.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-famsa-1.6.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 691
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-famsa-1.6.2_1.0_amd64.deb
Size: 250994
MD5sum: dc82aec256ff9cbebfd6011ee21cc60a
SHA1: ebcadd1c5074a3b08947dcf3c8126825d0bd4cdf
SHA256: 64270024e03611ecba3fc3929c3372766d367df5994f5b417ff3cd17c7a0d55f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Algorithm for large-scale multiple sequence alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fast5-0.6.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 211
Depends: gensoft-hdf5-1.10.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fast5-0.6.5_1.0_amd64.deb
Size: 39252
MD5sum: 2f42d034b86d215b54ba467afae7304b
SHA1: eb0df0992bb98ad9ff32c7f1a9fc2fe5cf054acb
SHA256: 6fd595e3e63ee0c947f28cae16acb97a5c95b0c4b4e9c9da3c6cc47dbf4b6c7c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A lightweight C++ library for accessing Oxford Nanopore Technologies sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fasta-3.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 11889
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fasta-3.6_1.0_amd64.deb
Size: 4682598
MD5sum: f32d6126069cdea4733432448e1ea74f
SHA1: 7b8a0686673476b6796dcf563e6cfb631038ef55
SHA256: 30068b275767a17bccf2f0f6d4cb695ef55d78c3f05f1850a075db279d12fdf1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The FASTA package provides a modular set of sequence comparison programs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fasta-3.8h
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12483
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fasta-3.8h_1.0_amd64.deb
Size: 4980118
MD5sum: 260d53bf45baa3f44587a9e13be6caf9
SHA1: 5d0a3b861a31c7ada5dfdbae594d1af59cb97952
SHA256: 690a16ff480b2836a9ba13dc627fb56e5ba23f39efcec3bf0707d4cd0145ac8b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The FASTA package provides a modular set of sequence comparison programs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fasta2agp-2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6791
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fasta2agp-2.0_1.0_amd64.deb
Size: 2536892
MD5sum: 6dcdebafc44577f84da71d1af915849b
SHA1: a39d88a589ecd99dc8442edc9fa4c5e252714358
SHA256: f458d571e3aee3a422fbcc7bc5c3b84dd942ec2ae16c9826a49d7f712a03fc81
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Creating an AGP file from a FASTA-formatted scaffold sequence file
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastaextract-0.03
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 68
Depends: libc6, gensoft-squizz-0.99c
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastaextract-0.03_1.0_amd64.deb
Size: 15048
MD5sum: 16ebd910c5d8d1accbd78a29b576c519
SHA1: 864d8f83cb37b72b86ed058f5d1b96ae7f0dd2eb
SHA256: 0f023e3c28d105c80f70a5cdf0ac9a12c006ef9be9c8f553ef244387978e8af6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: extract or exclude entries by name from fasta formatted files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastahack-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 297
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastahack-1.0.0_1.0_amd64.deb
Size: 104134
MD5sum: 7408c21b5706e9bf226028fc45af6228
SHA1: 42babb2f73baf3b01df1e412c6e9824e4ed0b626
SHA256: 15ff3c3fa96c46e091c7356b21aefc92fddca87d2afef08c127f3b9fef79dab6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastani-1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 11473
Depends: zlib1g, gensoft-r-3.6.2, libquadmath0, libc6, gensoft-gcc-9.2.0, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastani-1.3_1.0_amd64.deb
Size: 8261276
MD5sum: 969d6076dd3317865203e9d77485258b
SHA1: 2bfaabda2060bf9e68549a041e681462fb04f465
SHA256: 75365e0d5d37ec72b038cd2aa9ec26288e38bd3375ebdd8902a7d3885ba1e4a4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI). ANI is defined as mean nucleotide identity of orthologous gene pairs shared between two microbial genomes. FastANI supports pairwise comparison of both complete and draft genome assemblies.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastani-1.33
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 11597
Depends: libc6, gensoft-gsl-2.6, gensoft-gcc-9.2.0, gensoft-r-3.6.2, zlib1g, libquadmath0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastani-1.33_1.0_amd64.deb
Size: 8311866
MD5sum: d7c412aeb8cbd2098e0e9f3553993272
SHA1: 47646d410d534d34f705c7c72e6a8c186991a885
SHA256: 0adc5a6e711f01c7923af9fa8e66d5eef10352a1104b1880d11b1f7b4b69b09b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI). ANI is defined as mean nucleotide identity of orthologous gene pairs shared between two microbial genomes. FastANI supports pairwise comparison of both complete and draft genome assemblies.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastarename-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastarename-1.0_1.0_amd64.deb
Size: 3944
MD5sum: 3a4275d0f7158d9579c901352848038a
SHA1: 1c18218df2258c61f958872656f36ae951386917
SHA256: fa3b960098ae018a9c135a13a3ab6707ef958331b2249411a5aca2891365126a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: parse a file with fasta sequences replace the identifier of a fasta sequences by a short identifier and generate a file with renamed fasta sequences and a file of mapping
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastcodeml-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2275
Depends: gensoft-nlopt-2.6.1, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastcodeml-1.1.0_1.0_amd64.deb
Size: 506244
MD5sum: 7b3e1d622e7b73a27de0a85070ac88af
SHA1: f5a571a83944eae6b121ea0fa5ad26049e39be71
SHA256: 7bd272eb0a6397be12ee450c25bb2d5e75b6fb9fae2be0baf1ee11975e45db67
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastCodeML is a software to infer positive selection along positions of a protein coding gene using the Branch-Site model of evolution (Yang and Nielsen, 2002, Mol Biol Evol).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastdnaml-1.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 252
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastdnaml-1.2.2_1.0_amd64.deb
Size: 87746
MD5sum: 939fb2f09052e14f3b52894d03c8a9c9
SHA1: 220507e59ae72393f6cfecb0ec4e5d663430efca
SHA256: 18a13223cfd5d327afd749384dae2eee82ff54419c590190750bc41a7741d5b9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Program for estimating maximum likelihood phylogenetic trees from nucleotide sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastgear-na
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1942883
Depends: libexpat1, libxml2, libtinfo5, libc6, libpcre2-8-0, libblkid1, libffi7, libpcre3, libglib2.0-0, libstdc++6, libquadmath0, libselinux1, zlib1g, libmount1, liblzma5, libgcc-s1, libicu66, libcrypt1, libncurses5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastgear-na_1.0_amd64.deb
Size: 932880652
MD5sum: 00131cfe86ca320532c8ad5f342a1022
SHA1: a1c7a8ad9e5bf9b5873e465088eea4f2e57f5413
SHA256: b6515579e507287cea434239bda0bbcc5f742c5c2078047160e4792fd76696d0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fastGEARis a software for analysing sequence alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastglobetrotter-a1dc395
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 5204
Depends: libc6, gensoft-r-4.1.0, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastglobetrotter-a1dc395_1.0_amd64.deb
Size: 4770388
MD5sum: 0342b8a9d5720bd2d062c8e462c84986
SHA1: e9e10d295a29cb45b1675629f8af54420f1a94ae
SHA256: 4b363aaaa2cc29fa1363a02ad77b890a3dfc23a8c458cfd882f88d78b8809803
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: haplotype-based admixture inference and dating software
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastlink-4.1p
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2993
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastlink-4.1p_1.0_amd64.deb
Size: 1555438
MD5sum: ee33396a422a1d3185160cafc0c98bc9
SHA1: bdc5f1e08332fb0d9b004e47a6999ef9c2bc8528
SHA256: 88ddc8bfd6eb0a98cad4a034dab3efdb66ad9bff41f3f7171f8ac2c2b72f1933
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Genetic Analysis Software
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastme-2.1.6.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 280
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastme-2.1.6.1_2.0_amd64.deb
Size: 132432
MD5sum: 5aab404aba20d36a8fddb23f4e748cf8
SHA1: 579dc71dee62ccf380a5e55e249ed10488fc5f54
SHA256: 6eda82c0cc18fb55ae21b4ec6b427f1f98c1bee08e6e6dbd69f5d1061637fc27
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastME provides distance algorithms to infer phylogenies. FastME is based on balanced minimum evolution, which is the very principle of NJ. FastME improves over NJ by performing topological moves using fast, sophisticated algorithms. The first version of FastME only included Nearest Neighbor Interchange (NNI). The new 2.0 version also includes Subtree Pruning and Regrafting (SPR), while remaining as fast as NJ and providing a number of facilities distance estimation for DNA and proteins with various models and options, bootstrapping, and parallel computations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastme-2.1.6.2
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 279
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastme-2.1.6.2_2.0_amd64.deb
Size: 130374
MD5sum: af2b1ef2c6504e54bdc36df162d7494d
SHA1: 228fc433153e2b7259e0a59198511219685b6854
SHA256: 64a563c4f4f9c1e6bb8b2c5bf55408742da97805391c72867c32bae1e589787c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastME provides distance algorithms to infer phylogenies. FastME is based on balanced minimum evolution, which is the very principle of NJ. FastME improves over NJ by performing topological moves using fast, sophisticated algorithms. The first version of FastME only included Nearest Neighbor Interchange (NNI). The new 2.0 version also includes Subtree Pruning and Regrafting (SPR), while remaining as fast as NJ and providing a number of facilities distance estimation for DNA and proteins with various models and options, bootstrapping, and parallel computations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastme-2.1.6.3
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 284
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastme-2.1.6.3_2.0_amd64.deb
Size: 133572
MD5sum: 91c49ffecbb69d6e98638163038e179a
SHA1: c4066172282731271e6970a19cf8ff192ea22afb
SHA256: 5b6187b1fdaee1bf8344b553f7632e5b1beff14c0b1baaa3e562c71f57a72812
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastME provides distance algorithms to infer phylogenies. FastME is based on balanced minimum evolution, which is the very principle of NJ. FastME improves over NJ by performing topological moves using fast, sophisticated algorithms. The first version of FastME only included Nearest Neighbor Interchange (NNI). The new 2.0 version also includes Subtree Pruning and Regrafting (SPR), while remaining as fast as NJ and providing a number of facilities distance estimation for DNA and proteins with various models and options, bootstrapping, and parallel computations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastme-2.1.6.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 284
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastme-2.1.6.4_1.0_amd64.deb
Size: 133706
MD5sum: 1d9183929659827705fd14c46c222a78
SHA1: 2edf1e9041baee10d26c34cb93335af036c0cb98
SHA256: 429902db5405556f5f31b44a43599a4798cac757b2e37e6df5f58dc8bdac9faa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastME provides distance algorithms to infer phylogenies. FastME is based on balanced minimum evolution, which is the very principle of NJ. FastME improves over NJ by performing topological moves using fast, sophisticated algorithms. The first version of FastME only included Nearest Neighbor Interchange (NNI). The new 2.0 version also includes Subtree Pruning and Regrafting (SPR), while remaining as fast as NJ and providing a number of facilities distance estimation for DNA and proteins with various models and options, bootstrapping, and parallel computations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastml-3.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1328
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastml-3.11_1.0_amd64.deb
Size: 539094
MD5sum: b71cbe019e06ed6f8ad24e1aab7b797c
SHA1: 156e3190f88b507c1ff040bbc8d28a3b63527caf
SHA256: ae841e12b3a476542e107b6d8aba2bc731ca4d8f17ae2bbe9f9c22537ab76955
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Maximum likelihood reconstruction of ancestral amino-acid sequences.  A branch-and-bound algorithm for the inference of ancestral amino-acid sequences when the replacement rate varies among sites.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastp-0.20.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 23600
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastp-0.20.1_1.0_amd64.deb
Size: 3933944
MD5sum: 1bea13f9232411e21bc872e8f64cbc83
SHA1: f960bb88ece868a5852ccbd4abab261dcf220b52
SHA256: 9ecffe1d693389b1dcc4020e12894d69c4d6514079f1e6b0d9222b8ee7539376
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastq-info-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 59
Depends: gensoft-fqzcomp-4.6, gensoft-dsrc-2.0.2, gensoft-quip-1.1.8, gensoft-pigz-2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastq-info-1.0_1.0_amd64.deb
Size: 13666
MD5sum: a809fa4511db5dfa8fcefd10b8061df2
SHA1: 16e98e102a213fd3d3d87f5f2f762d9456e63f5c
SHA256: f1a94062fcda97de97d8ab52efb58324acabad2014bc2c226cf30892f5f81456
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Estimating standard descriptive statistics from FASTQ files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastq-info-2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 66
Depends: gensoft-pigz-2.4, gensoft-fqzcomp-4.6, gensoft-dsrc-2.0.2, gensoft-quip-1.1.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastq-info-2.0_1.0_amd64.deb
Size: 15080
MD5sum: a86327d950481431f5a53eec688503f8
SHA1: 652e7fb2d3818f5fe6cbdb5b009982bfb8328bed
SHA256: 890b7d65b4b53d6ebf828f09001cbaef9fad44b9cc532cac3de211a61facae82
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Estimating standard descriptive statistics from FASTQ files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastq-info-3.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 74
Depends: gensoft-fqzcomp-4.6, gensoft-pigz-2.4, bzip2, gzip, gensoft-quip-1.1.8, gensoft-fqreport-1.0, gensoft-gawk-5.0.1, gensoft-dsrc-2.0.2, bash, bc
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastq-info-3.0_1.0_amd64.deb
Size: 16538
MD5sum: 7ebe31db3beb7e67d2541b00c717d5e8
SHA1: b90f41775534f25d3dcd414124670dc3d454fe1f
SHA256: 2b10c1a052d808594b65a02c50f9fb9b0f69b0e25f3ea502bbf06a3c6f995150
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Estimating standard descriptive statistics from FASTQ files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastq-pair-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 28
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastq-pair-1.0_1.0_amd64.deb
Size: 10296
MD5sum: 304a095d7144f7b7bff405df772af16e
SHA1: 7a58fe2a437a3860ea9f8999de7b40dc0a6d2ce7
SHA256: ddf2389f0fc1abd026ba67d753541663d74461446bf17e73ed214c21b7188246
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rewrite paired end fastq files to make sure that all reads have a mate and to separate out singletons.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastq-screen-v0.14.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1652
Depends: gensoft-expat-2.2.9, gensoft-libjpeg-turbo-2.0.4, gensoft-libtiff-4.1.0, gensoft-xorg-libs-1.1, gensoft-libgd-gd-2.2.5, gensoft-adm-perl-5.30.1, gensoft-bwa-0.7.17, gensoft-bismark-v0.22.3, gensoft-freetype-2.10.1, gensoft-bowtie-1.2.3, gensoft-fontconfig-2.13.91, gensoft-samtools-1.10, gensoft-xz-5.2.4, gensoft-bowtie2-2.3.5.1, gensoft-libpng-1.6.37
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastq-screen-v0.14.0_1.0_amd64.deb
Size: 845110
MD5sum: 249453d2bbe814a1f120201cc0dfb760
SHA1: 2e7810472351377ebead75264d28cbb0e97049ac
SHA256: ab62355ff0edeeedb5ff9a767df63ac78d723157dad14012afffdb73c1d16bbd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastQ Screen allows you to screen a library of sequences in FastQ format against a set of sequence databases so you can see if the composition of the library matches with what you expect.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastq-tools-0.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 569
Depends: libc6, gensoft-pcre-8.43
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastq-tools-0.8_1.0_amd64.deb
Size: 195374
MD5sum: d051e9ee986d2a10de668f30beb2030b
SHA1: b562cfc9c5dd41e75cfa6c894d2899bfa92f6c68
SHA256: e291af99425698060bfcc43478f7c53d09a8a466ac52f459583db7bbe03a6e4f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This package provides a number of small and efficient programs to perform common tasks with high throughput sequencing data in the FASTQ format. All of the programs work with typical FASTQ files as well as gzipped FASTQ files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastqc-0.11.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10983
Depends: gensoft-adm-perl-5.30.1, gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastqc-0.11.9_1.0_amd64.deb
Size: 10100888
MD5sum: 53e319619d525dff8e7e6e9d4b095072
SHA1: e5adaa55111df5ba0c40d0a2a5f33256b8826c2e
SHA256: d26fc8bb1d42c5302120f021fb8ceaafd50da2f79bfdcbbc5b234f0e6f5c142f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A quality control tool for high throughput sequence data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastqsplitter-1.2.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 12651
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastqsplitter-1.2.0_1.0_amd64.deb
Size: 4008892
MD5sum: edae148f3cc26289f71236115886148b
SHA1: 0092eab17db66b6a4c9d104fee76abe44d9b3551
SHA256: f20f6186da2ed8d4fbda160ceed4406d7871253d742851deba9e97d575ceb79d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: splits a fastq file over the specified output files evenly
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastqsplitter-2.0.0-dev
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 12423
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastqsplitter-2.0.0-dev_1.0_amd64.deb
Size: 3930988
MD5sum: b3a6045b39d7a9d7bee3a0e0a2935cbb
SHA1: 25911081a8ec27d8fefceb49f0ac410ade6acdfa
SHA256: 61f1607a2ccdbad54980e921ffed2956a81e4c695ace61b49d90325a0a7e48f7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: splits a fastq file over the specified output files evenly
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastqtk-0.27
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 161
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastqtk-0.27_1.0_amd64.deb
Size: 53894
MD5sum: 65eae6e0f2aac6e34e5ae86efcc82762
SHA1: 759ffbf78e0af917071da030eb8992a5ddd94651
SHA256: 4dc690cd80616e33dbf7144577a3a9a05926ba0f3668038794188e999e490149
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fastqtk is a fast and lightweight tool for interleaving/deinterleaving/counting/trimming FASTQ files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastqtosanger-20120405
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastqtosanger-20120405_1.0_amd64.deb
Size: 4088
MD5sum: 02f224fb43f498e85b7c5cc05201463b
SHA1: 5600f289a7e4f58c348c702c4c51828a2ae929bf
SHA256: 8f8abb20963151ca3d3bea528ee994dfd3d3944a7d0a732083b31e71b36a5854
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastqToSanger is a tool that detects the quality scoring system in FastQ formatted files, and can convert data to Sanger one if needed.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastqvalidator-0.1.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 186
Depends: zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastqvalidator-0.1.1_1.0_amd64.deb
Size: 75274
MD5sum: 5930dfae3b63fb435e58e138429a2a66
SHA1: 481c64499685b729fc7a1b3149bbdc0c7068b411
SHA256: 54edb13f75d042c8c1f4fa6743f91bc81c13a0793be31d73d51213a4dbb36252
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastQ Files validator
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastsimcoal2-fsc2705
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 5893
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastsimcoal2-fsc2705_1.0_amd64.deb
Size: 3469770
MD5sum: 9cd03ac8c7e76cc7b435260cdf34c24e
SHA1: e5ddfef66b8eb9f5b3612d5dc5f25854c3abc2b6
SHA256: d0700cafe8bc30c6d541123a3e5acae084330bfa8f7131ce7d5aec549c965eac
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fast sequential Markov coalescent simulation of genomic data under complex evolutionary models
License: unknown
Vendor: Institut Pasteur

Package: gensoft-faststructure-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 216012
Depends: libbz2-1.0, zlib1g, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17, libc6, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-faststructure-1.0_1.0_amd64.deb
Size: 69994364
MD5sum: 67b459326a5ea3b874cf01a3aa0b6299
SHA1: b6c6de9ed0600f623df865da6bc5201fedece953
SHA256: a110ff358e31766a90893ef754408fefa547e68a502f259134f7c9ba38f5a0c3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fastStructure is a fast algorithm for inferring population structure from large SNP genotype data. It is based on a variational Bayesian framework for posterior inference.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fasttree-2.1.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 763
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fasttree-2.1.11_1.0_amd64.deb
Size: 407098
MD5sum: d0328f3a4278861a6d9dbefe73111a6e
SHA1: 7a023619c3e8f60612bf868bfc043a1f6cbf0e7f
SHA256: c413d9ef69e3a1783fe277822219dc7263cd59dd7424e68b7f03275aa941a7e4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastuniq-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 34
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastuniq-1.1_1.0_amd64.deb
Size: 13036
MD5sum: c8e11255f34611dfdf77b6a1f0d8cc50
SHA1: bd07e33c267864e77014b2048845d1f7194d78ae
SHA256: 100efb416ae9f1a3daef71cc431aaf8be429e45bfe6c2f84a3bc8bae1d953d54
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an ultrafast de novo duplicates removal tool for paired short DNA sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fastx-toolkit-0.0.14
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3273
Depends: gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, gensoft-libpng-1.6.37, gensoft-xz-5.2.4, zlib1g, gensoft-fontconfig-2.13.91, gensoft-libgtextutils-0.7, gensoft-freetype-2.10.1, gensoft-libjpeg-turbo-2.0.4, gensoft-expat-2.2.9, gensoft-libgd-gd-2.2.5, gensoft-libtiff-4.1.0, libbz2-1.0, gensoft-xorg-libs-1.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fastx-toolkit-0.0.14_1.0_amd64.deb
Size: 1047538
MD5sum: eedf78ad3a636aabca7f94455e91c6e0
SHA1: 86d21929c67b7e658dca54a5b675ce1583864689
SHA256: c954152d55a27d831863f69f4bbb84ac5ff5a4f56deb0dee0f65791e058bc636
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fatools-0.99
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 104
Depends: libc6, gensoft-adm-perl-5.30.1, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fatools-0.99_1.0_amd64.deb
Size: 38112
MD5sum: 5c451a16164fa3b43afeb3b8a4953fab
SHA1: e0f94fb78963d39eb61be6d080b261604d15253d
SHA256: f45ac73ea290cc5190ed9100abe741723056967e1764813cbdb8c44d604c9b52
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FASTA sequences files utilities
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fermi-lite-0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2275
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fermi-lite-0.1_1.0_amd64.deb
Size: 801638
MD5sum: abd22b7cc3d0df7c393edfbb20475752
SHA1: 062616cd3f39f151832fc7f1d514acd6481edfc4
SHA256: 6ffc715f8682eca4e0239eead1f965339a561713f1f8d17b149d9b5392bf9bf7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Standalone C library for assembling Illumina short reads in small regions
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fftw-2.1.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1509
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fftw-2.1.5_1.0_amd64.deb
Size: 550318
MD5sum: 499260c1dfa55bf909d76b5a8639ea51
SHA1: 06835648d6614758f4d3b3c134a87d517cfc33d1
SHA256: 54d006ad877507a2bed7c851509b4f791725abedcfc04ca5275916a9f0b57b58
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fftw-3.3.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 17657
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fftw-3.3.8_1.0_amd64.deb
Size: 5663904
MD5sum: 5e012909f8cbc316ff900d3674e14131
SHA1: 26d0e0a904c7f817a9d7a14bc37a1b3103306e2c
SHA256: c11c4801615dc31314904c369fc186d8e99b699c8f27c9b6cbb7e1d9b742a938
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fgbio-1.5.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 38510
Depends: gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fgbio-1.5.1_1.0_amd64.deb
Size: 36901920
MD5sum: 4c45f77ba79bfdf4eb982b926de960aa
SHA1: 7eb5bc63226937b724711222935c5a90ac8ea317
SHA256: 1e6ab6248e049f53c5dadda748f43a97101e0570a8f1bf6dec93d0ddbeb3f973
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: command line toolkit for working with genomic and particularly next generation sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-figtree-1.4.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3530
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-figtree-1.4.4_1.0_amd64.deb
Size: 3250800
MD5sum: d0755f0c44548cb7da1e26f525af3b78
SHA1: 4f84554d2efb0e933b1fadf8326ae5de22047f86
SHA256: 9b0a9ca2543142b366b5dcd8646a1f6996aee4903149ef96f49809e504d50afb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FigTree is designed as a graphical viewer of phylogenetic trees and as a program for producing publication-ready figures.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-filtlong-0.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 223
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-filtlong-0.2.0_1.0_amd64.deb
Size: 85996
MD5sum: 6775b291c073c3cd7233296d53990ccb
SHA1: 67f459e205ea1bf0e1ee0053965026858cc72c6d
SHA256: 6f63ff90a92e735968728f2c0b8f62161ecccb3bf652f93df785c2c4c6ad8095
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Filtlong is a tool for filtering long reads by quality. It can take a set of long reads and produce a smaller, better subset. It uses both read length (longer is better) and read identity (higher is better) when choosing which reads pass the filter.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-finddqe-150706
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 37175
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-finddqe-150706_1.0_amd64.deb
Size: 14418496
MD5sum: 4ed5d1d36ae39fd29aaf832492708626
SHA1: ee6ab556b648ef3df052e98b083af7e90b52577f
SHA256: 160bbbcd6953ed7d51025cb8d478bf690dcf750ca15f1791917e198658a6490a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FindDQE determines the detective quantum efficiency (DQE) of a detector
License: unknown
Vendor: Institut Pasteur

Package: gensoft-finestructure-4.1.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 19792
Depends: libgomp1, libc6, libgcc-s1, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-finestructure-4.1.1_1.0_amd64.deb
Size: 6349718
MD5sum: bd93370ac0dd187d8ee1438cb7ef63e8
SHA1: cb2e6e5a97095d9465b2203bcd913c7ad555b493
SHA256: 7fa6f9331282a5fa712f453d01bb408ee0dea8282c02ede254090f1d4bb5f5b0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a fast and powerful algorithm for identifying population structure using dense sequencing data.  By using the output of ChromoPainter as a (nearly) sufficient summary statistic, it is able to perform model-based Bayesian clustering on large datasets, including full resequencing data, and can handle up to 1000s of individuals. Full assignment uncertainty is given.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fivepseq-1.0b5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 522499
Depends: gensoft-adm-python-3.8.1, gensoft-phantomjs-2.1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fivepseq-1.0b5_1.0_amd64.deb
Size: 154615190
MD5sum: e7ec1cebcc0383feb74f6f62a844e503
SHA1: 79d65bde6e4b2c9593af116738da824b18275bd9
SHA256: ee7f4e171afbfe4d035e023ad78f824c12b2505f66650f0ca8f759d35319f0ee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fivepseq is a software package for analysis of 5prime endpoints distribution in RNA sequencing datasets. This is particularly useful for techniques that capture 5prime  monophosphorylated RNAs, such as 5PSeq, PARE-seq or GMUC. It may also be useful for ribosome profiling datasets and alike.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-flash-1.2.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 105
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-flash-1.2.11_1.0_amd64.deb
Size: 36168
MD5sum: 53457214fe84cd2c39eb37612ca3a3bf
SHA1: a3a0295cb01a0f630701215332d40360bd6a9d07
SHA256: 5fe2c8cc61fb82d52888ebc82e3c4b9df327551d6e2e9cc283a45c8b37cce896
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FLASH (Fast Length Adjustment of SHort reads) is a very fast and accurate software tool to merge paired-end reads from next-generation sequencing experiments. FLASH is designed to merge pairs of reads when the original DNA fragments are shorter than twice the length of reads. The resulting longer reads can significantly improve genome assemblies. They can also improve transcriptome assembly when FLASH is used to merge RNA-seq data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-flatbuffers-23.3.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 11843
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-flatbuffers-23.3.3_1.0_amd64.deb
Size: 2424902
MD5sum: e812b10cbf76dbe0e62d661e1b67178b
SHA1: 0f7b3d74f1152e8e9a400cc65c02742ed4135543
SHA256: d3ef1f44b6f92444e3c27d68e290b3dba70b74d27ded2bdbc8c87d3283d35425
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FlatBuffers is a cross platform serialization library architected for maximum memory efficiency
License: unknown
Vendor: Institut Pasteur

Package: gensoft-flex-2.6.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2487
Depends: libc6, gensoft-m4-1.4.18
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-flex-2.6.4_1.0_amd64.deb
Size: 518394
MD5sum: be7ae7724cc1573e9179528e0d5502e9
SHA1: 36867eafeac9ae2b3986024babdffd5d64795747
SHA256: 0a9f05f24d1aa5685eac830ac6f16af14a3bf978ed2845eeb80e3d2b14664c4e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: flex, the fast lexical analyzer generator, is a tool for generating scanners - programs which recognize lexical patterns in text.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-flexbar-3.5.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1416
Depends: zlib1g, libc6, gensoft-gcc-9.2.0, libbz2-1.0, gensoft-tbb-2020.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-flexbar-3.5.0_1.0_amd64.deb
Size: 472780
MD5sum: e4b4cad2742add774d135fe9a36709f3
SHA1: 071eff1e20d081388961fdb0ee7cd544847fbe0c
SHA256: b432656c2d714fb428b7ebc42d0dfa21175501f47b2fd8dcb8abe226aa9246ce
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: flexible barcode and adapter removal for sequencing platforms
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fltk-1.3.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6988
Depends: gensoft-xorg-libs-1.1, gensoft-gcc-9.2.0, gensoft-freetype-2.10.1, gensoft-expat-2.2.9, gensoft-libpng-1.6.37, gensoft-fontconfig-2.13.91, gensoft-libdrm-2.4.100, gensoft-libjpeg-turbo-2.0.4, libc6, zlib1g, libbz2-1.0, gensoft-glu-9.0.1, gensoft-mesa-19.0.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fltk-1.3.5_1.0_amd64.deb
Size: 2159916
MD5sum: a17eaf3a5c4932a96f5e91eede37baaf
SHA1: 3d9b336a1a1e53ae7bedeb5149c6a4fa47f9dab1
SHA256: 3042b1c3e14e68e22f0935e6c40a9212ffb27889831f8035a1f8512c2b328671
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FLTK is a cross-platform C++ GUI toolkit. FLTK provides modern GUI functionality without the bloat and supports 3D graphics via OpenGL and its built-in GLUT emulation.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-flye-2.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 98207
Depends: zlib1g, gensoft-gcc-9.2.0, libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-flye-2.6_1.0_amd64.deb
Size: 31338478
MD5sum: 05a262ad9a98d98a46eb9b5dc20925d0
SHA1: ef4cc6736d7e97fffd7b0f42355821df5596001e
SHA256: 2b0ca9e4c0cdf96cd448dfecc2d755a095792cf581543f0b8ef4526f43f539f2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies.  It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipeline, it takes raw PB / ONT reads as input and outputs polished contigs.  Flye also includes a special mode for metagenome assembly.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-flye-2.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 100420
Depends: gensoft-gcc-9.2.0, zlib1g, gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-flye-2.9_1.0_amd64.deb
Size: 41740452
MD5sum: faf4c4258403337fe75c020c7ea4afeb
SHA1: 6a9e98c52ad746ffd37d491c70e86b64124f9b74
SHA256: 07c2f27e8184423703ea5993c21c8329939d864ac96436f1c534bed0c745feae
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies.  It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The package represents a complete pipeline, it takes raw PB / ONT reads as input and outputs polished contigs.  Flye also includes a special mode for metagenome assembly.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fmriprep-21.0.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5590361
Depends: gensoft-adm-python-3.8.1, gensoft-apptainer-1.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fmriprep-21.0.1_1.0_amd64.deb
Size: 5455580406
MD5sum: a575a22852276bd2c5ca072b1cdfe45a
SHA1: 7fd382dd99ec52b7e91f12416dfdbeb624dc92cc
SHA256: 8cd061aa47eaff5fbf3ea0710ee683d8b149eaba48312f9057ee011ad403bd1a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: robust and easy-to-use pipeline for preprocessing of diverse fMRI data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fmriprep-21.0.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5591769
Depends: gensoft-apptainer-1.0.0, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fmriprep-21.0.2_1.0_amd64.deb
Size: 5457011456
MD5sum: 321e16f9c4a134fcac8e00b957c9b87b
SHA1: e44e6eec1686c4fc90e5620d23113e35d34c44f9
SHA256: cc6411f4297efc9b0caa6759b273e83255c5c9c67f98ac5fc07dd4ba60dd6948
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: robust and easy-to-use pipeline for preprocessing of diverse fMRI data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-foldseek-5-53465f0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 16749
Depends: gensoft-gcc-9.2.0, libc6, zlib1g, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-foldseek-5-53465f0_1.0_amd64.deb
Size: 7264892
MD5sum: f1fbabb055c86db695a503626b382af5
SHA1: d746b7675168e54f42a07cb0ab9cb33df9e978bc
SHA256: 8af35004e7c4671e83ed2bf72a3105b651a92a68470597f87763e63cdfb98e6e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Foldseek enables fast and sensitive comparisons of large structure sets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fontconfig-2.13.91
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3291
Depends: libc6, libbz2-1.0, gensoft-libpng-1.6.37, gensoft-expat-2.2.9, zlib1g, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fontconfig-2.13.91_1.0_amd64.deb
Size: 1288966
MD5sum: 4e7a7f15aa500ae37e7779001e3c8397
SHA1: 7f379581a579b0a752f61c11a672295cd4794400
SHA256: c318f17515a3612c92d30fc23f7db817064e527cd1b6bb6550eabf1400d91715
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fq2dna-21.06
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 96
Depends: gensoft-sam2msa-0.3.3.1, gensoft-fasta2agp-2.0, bash, gensoft-contig-info-v2.01, gensoft-java-13.0.2, bc, gensoft-spades-3.15.2, gensoft-ntcard-1.2.2, gensoft-infernal-1.1.4, sed, gensoft-prokka-1.14.5, gensoft-gawk-5.0.1, gensoft-fqcleaner-21.10, gensoft-platon-1.6, gensoft-fqtools-1.2, gensoft-minimap2-2.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fq2dna-21.06_1.0_amd64.deb
Size: 25722
MD5sum: b6f4afc6dbddae1bb9eb1dfe1ea9b657
SHA1: d5cf6de650ef3016e89e299a5965132df7ddd697
SHA256: eda9139cb6469e7e685f36ba3b9a34c20019f725bc1402ebccd60312725f037b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fq2dna (FASTQ files to de novo assembly) is a command line tool written in Bash to ease the de novo assembly of archaea, bacteria or virus genomes from raw high-throughput sequencing (HTS) paired-end (PE) reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fqcleaner-21.06
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 269
Depends: gensoft-java-13.0.2, gensoft-musket-1.1, gensoft-ntcard-1.2.2, gensoft-reaper-15-065, bash, bc, gensoft-fqtools-1.2, gensoft-alientrimmer-2.0, gensoft-flash-1.2.11, gensoft-bzip2-1.0.6, gensoft-gawk-5.0.1, gensoft-dsrc-2.0.2, gensoft-rock-1.9.3, gensoft-alienremover-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fqcleaner-21.06_1.0_amd64.deb
Size: 41648
MD5sum: c6098544ea68c8242af50665e9966f1e
SHA1: b708c8755e3ee50b8540f418f491f1b69f2cf62c
SHA256: 87c9224bda37e989e1dabe9b9c4a70b095d85668d462d30efb499a0ae4f26309
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fqCleanER (fastq Cleaning and Enhancing Routine) is a command line tool written in Bash to ease the different standard preprocessing steps of short high-throughput sequencing (HTS) reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fqcleaner-21.10
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 270
Depends: gensoft-bzip2-1.0.6, gensoft-reaper-15-065, gensoft-alientrimmer-2.0, gensoft-alienremover-1.0, gensoft-java-13.0.2, gensoft-rock-1.9.5, gensoft-fqtools-1.2, bash, gensoft-musket-1.1, gensoft-gawk-5.0.1, gensoft-dsrc-2.0.2, bc, gensoft-ntcard-1.2.2, gensoft-flash-1.2.11
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fqcleaner-21.10_1.0_amd64.deb
Size: 41124
MD5sum: 02aad8e720fb32e3ed9b6915c7ebdccb
SHA1: 72aeef967e257bbbc85568f03bb46a2d0b9a745a
SHA256: 894c99988f08659f2524fd5b0bec896ea31c37dcb80034e29e77a23e5dd2061b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fqCleanER (fastq Cleaning and Enhancing Routine) is a command line tool written in Bash to ease the different standard preprocessing steps of short high-throughput sequencing (HTS) reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fqgrep-0.4.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 44
Depends: gensoft-tre-0.8.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fqgrep-0.4.4_1.0_amd64.deb
Size: 19316
MD5sum: 7cdbaf1783d222f91324982e60dd94a8
SHA1: 19a7e43b4a14e9c234c919cbdf44b06279de87bf
SHA256: a42fc4dcd489c6d60e49f48012b684fac9c149b3a0fd27e4de40d1f52b1cc1b6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an approximate sequence pattern matcher for FASTQ/FASTA files. One can think of it as being a grep and agrep like tool optimized for FASTQ and FASTA files. It can work directly on both compressed and uncompressed file types.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fqreport-1.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 116
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fqreport-1.0_1.0_amd64.deb
Size: 36688
MD5sum: b48f89901d63aa14efcf54283b88b516
SHA1: bbe259a7a129d7ddf7ba2e38a3be0519682cf20d
SHA256: b6094bae586517029c555046ed5c488d635899174b638f6c90682971046f9e43
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: estimating several standard descriptive statistics from FASTQ-formatted High-Throughput Sequencing (HTS) read files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fqreport-1.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 120
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fqreport-1.1_1.0_amd64.deb
Size: 37892
MD5sum: f3fb05d246545a7da72c6c25e866082b
SHA1: 22c0775271a336686b8dde53db056147b7463704
SHA256: 2d4db7659dd3e4a4baa25c92d6961aa7b042f42442c4d5b54ed4bac14c74ea21
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: estimating several standard descriptive statistics from FASTQ-formatted High-Throughput Sequencing (HTS) read files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fqtools-1.1a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 290
Depends: gensoft-adm-perl-5.30.1, libssl1.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fqtools-1.1a_1.0_amd64.deb
Size: 97168
MD5sum: 7dff9235fec8749fbd45ec6ad3826983
SHA1: 851a0d93956547c8c51c255c90697bc32a6701b3
SHA256: 799c742909b042956882ab6c878ef5b3be8e51e04665d572500f2c475615c8e7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FASTQ sequences files utilities
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fqtools-1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 290
Depends: libssl1.1, gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fqtools-1.2_1.0_amd64.deb
Size: 97434
MD5sum: c73f7bf7dded7bcd616c006541245b2d
SHA1: 456493cab816efde076a3bac1481ac23e0034a39
SHA256: eac3c2e3d6d20997672e09c5a0844045a3f5a859154d2828e2f77b21121bca87
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FASTQ sequences files utilities
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fqzcomp-4.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 389
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fqzcomp-4.6_1.0_amd64.deb
Size: 132184
MD5sum: 3836e6af2b489d3dc700da6c32e7d90c
SHA1: c8b4534eb9a86035b943f6fdd531585ba2844fd4
SHA256: 891d5ac28583240379b52c2f97276720e81dabb43bfe0ff22f8a2c495d353be1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fastq compression tool
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fraggenescan-1.30
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6523
Depends: gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fraggenescan-1.30_1.0_amd64.deb
Size: 1690796
MD5sum: 11ce01ffb4e6b41d3e056bac51738917
SHA1: d59c952e5f3ea469f16ad257cacd1ae7ac74e8eb
SHA256: 92f4998c2b13afafcd6dda3266e0d995dde46b37166db8fe37537b9cb4fdd003
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an application for finding (fragmented) genes in short reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fraggenescan-1.31
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6523
Depends: gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fraggenescan-1.31_1.0_amd64.deb
Size: 1690858
MD5sum: d228a5db3c2b37f77044b64aca59dadf
SHA1: e2dc2b229f379e82ac6698f268f022639809cd5c
SHA256: b212da15c29e4baf3e7280e0bece48c17199ad1174223d610804c1f267864e4f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an application for finding (fragmented) genes in short reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-frealign-v9.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 187188
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-frealign-v9.11_1.0_amd64.deb
Size: 72291106
MD5sum: 989504bf605339fd17df0462a89cc7fd
SHA1: 8c147e760877155b781e8d4e86d1030abab0089b
SHA256: aa65cfaa177c03c3bc9aad25ada54af14a2d9a8b38617d1c88fbc2506de2b83d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program for high-resolution refinement of 3D reconstructions from cryo-EM images of single particles.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-freebayes-v1.3.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 66824
Depends: libssl1.1, gensoft-tabixpp-1.1.0, libc6, gensoft-gcc-9.2.0, gensoft-htslib-1.10, gensoft-jsoncpp-1.9.2, libbz2-1.0, gensoft-libbam-2.5.1, gensoft-xz-5.2.4, zlib1g, gensoft-curl-7.68.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-freebayes-v1.3.2_1.0_amd64.deb
Size: 17670786
MD5sum: 29a90f36c445084748b21e0ed3186fba
SHA1: 04c2db71b66a58c6258a4bfb43745136825355f5
SHA256: 06fa19d7cf18b2a336ce0ee54b51e5ae6f73c8215a04c61e27444423d4f89da2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-freebayes-v1.3.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 66218
Depends: gensoft-xz-5.2.4, gensoft-gcc-9.2.0, libbz2-1.0, libc6, gensoft-curl-7.68.0, gensoft-htslib-1.10, libssl1.1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-freebayes-v1.3.3_1.0_amd64.deb
Size: 17622996
MD5sum: 570f6c88d0e430cb03b1f9108f1dc729
SHA1: 90dbe69dcad82e0630842b4e03ff944604a687e8
SHA256: 6666b09dc8d9a2d8bb070ea646539582a735616b4b82899e5886ba84b15454ca
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-freec-11.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 18352
Depends: gensoft-gcc-9.2.0, gensoft-r-3.6.2, gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-freec-11.5_1.0_amd64.deb
Size: 4169556
MD5sum: 1d61b735465e7bc5460809c4489ea9c1
SHA1: e9599c24efc7e9bf109ba8e5062d72fd11f98f16
SHA256: 13828b3b4f734c6b502cd398592542f910fd5684590193328174c463210df8e5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for detection of copy-number changes and allelic imbalances (including LOH) using deep-sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-freeglut-3.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1309
Depends: zlib1g, gensoft-expat-2.2.9, libc6, gensoft-xorg-libs-1.1, gensoft-libdrm-2.4.100, gensoft-mesa-19.0.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-freeglut-3.2.1_1.0_amd64.deb
Size: 306806
MD5sum: f46b96918796cb49347c005358782995
SHA1: 7b6ef691c502ace66363987e749d2acacc9c71a1
SHA256: f18821b82f7eb8329f6ed86c8c7b01b68538fc245f305131db6dbb640628f2f8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: freeglut is a free-software/open-source alternative to the OpenGL Utility Toolkit (GLUT) library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-freesurfer-7.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5216844
Depends: gensoft-singularity-3.7.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-freesurfer-7.1.1_1.0_amd64.deb
Size: 5296823972
MD5sum: 5676c668131301dc8504620a19542c93
SHA1: 2ca2db9a088ed2bdc88b98b8477cde3ebe7d9f26
SHA256: 5590f0f5921605fe09f72b5a851c59b3f3097d8993b0187d87420bc09e6a207f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An open source software suite for processing and analyzing (human) brain MRI images
License: unknown
Vendor: Institut Pasteur

Package: gensoft-freetype-2.10.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 11885
Depends: zlib1g, libc6, gensoft-libpng-1.6.37, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-freetype-2.10.1_1.0_amd64.deb
Size: 3808056
MD5sum: f06f4a0f849a39dfddd40385c2ee80a0
SHA1: c99aa85babf43e09f095d423c376e3225ec939f2
SHA256: 76606dd9a36431c6ce91bab99e75641f893ccc677f588c22be0e0bc3813b52b5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Accessibility Toolkit provides the set of accessibility interfaces that are implemented by other toolkits and applications. Using the ATK interfaces, accessibility tools have full access to view and control running applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fribidi-1.0.12
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 365
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fribidi-1.0.12_1.0_amd64.deb
Size: 96960
MD5sum: d6933de4093c5ca64af95444fbc3d0a7
SHA1: 405bb1e9861c2122bec2d1d7147f407983404b8b
SHA256: 3a45636cc265ad7d9d23e6ceeff747a0a98180d8aaeccb795233c43d5aad60b1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Free Implementation of the Unicode Bidirectional Algorithm
License: unknown
Vendor: Institut Pasteur

Package: gensoft-frogs-3.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 744707
Depends: gensoft-blast+-2.10.0, gensoft-mafft-7.453, zlib1g, gensoft-libiconv-1.16, gensoft-cutadapt-2.10, gensoft-osi-0.108.6, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, gensoft-hmmer-3.3, gensoft-symphony-5.6.17, gensoft-r-3.6.2, gensoft-fasttree-2.1.11, gensoft-pandoc-2.9.2.1, gensoft-itsx-1.1.2, gensoft-rdp-classifier-2.12, gensoft-gmp-6.2.0, gensoft-flash-1.2.11, gensoft-clp-1.17.6, libc6, gensoft-swarm-3.0.0, gensoft-glpk-4.65, gensoft-coinutils-2.11.4, gensoft-cgl-0.60.3, gensoft-curl-7.68.0, gensoft-dylp-1.10.4, gensoft-atlas-3.10.2, gensoft-emboss-6.6.0, gensoft-vol-1.5.4, gensoft-libpng-1.6.37, gensoft-adm-python-2.7.17, gensoft-lapack-3.9.0, gensoft-xz-5.2.4, gensoft-vsearch-2.14.2, gensoft-libxml2-2.9.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-frogs-3.1.0_1.0_amd64.deb
Size: 290897680
MD5sum: 77f4fc10c46260bb9009f641ea57fe22
SHA1: 8184c2a129650aec3107a67c21c67b2d4fdae71c
SHA256: fab562f11f27a64878b75ea93481682472913f39c50482ef4c352f4619b2dc61
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fsa-1.15.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 94197
Depends: gensoft-exonerate-2.4.0, gensoft-libjpeg-turbo-2.0.4, libc6, gensoft-xorg-libs-1.1, gensoft-adm-perl-5.30.1, gensoft-libgd-gd-2.2.5, gensoft-expat-2.2.9, gensoft-fontconfig-2.13.91, gensoft-freetype-2.10.1, gensoft-mummer-3.23, gensoft-libpng-1.6.37, zlib1g, libbz2-1.0, gensoft-xz-5.2.4, gensoft-gcc-9.2.0, gensoft-libtiff-4.1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fsa-1.15.9_1.0_amd64.deb
Size: 28731666
MD5sum: 2f0e24707d59209c05163b9041528420
SHA1: f5b118be7ff319e8357dc95ca847044c7e6229ab
SHA256: dc7d81f82357b03f3c15a1c77a58ec391f640380440e924fb43e573a7aa99f56
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FSA is a probabilistic multiple sequence alignment algorithm which uses a distance-based approach to aligning homologous protein, RNA or DNA sequences.  Much as distance-based phylogenetic reconstruction methods like Neighbor-Joining build a phylogeny using only pairwise divergence estimates, FSA builds a multiple alignment using only pairwise estimations of homology.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fsm-lite-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 313
Depends: libc6, gensoft-gcc-9.2.0, gensoft-sdsl-lite-2.1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fsm-lite-1.0_1.0_amd64.deb
Size: 116006
MD5sum: 23e8bcf44afc10912b122a2685838604
SHA1: ab798c35273b5a6a5143ffaa6967ce8c36490aba
SHA256: 27cf58cdf26f4fad2d740fd16d0a5e58de83b12faabb9ef2954df1da321eedfc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A singe-core implemetation of frequency-based substring mining.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-func-0.4.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 16163
Depends: gensoft-r-3.6.2, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-func-0.4.8_1.0_amd64.deb
Size: 4951004
MD5sum: b519f76ed03b7268f6ae7baf96bebb17
SHA1: 7cd78f35c51a9563103f1671d28a4198a81c2667
SHA256: 31344548e2c66bc2061d7a2034d0b2c4dd5c696188867df8828b040249a6738e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FUNC is a set of tools to analyse gene data using the Gene Ontology database.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-funguild-1.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 16024
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-funguild-1.1_1.0_amd64.deb
Size: 5110368
MD5sum: 5cac2020094285598ff9e7fe5abe79fd
SHA1: 6612cfe13df143a378e6204dfb525f676ce3989f
SHA256: 7e230e80048783b38473e63668e1dd5fae827d4a53c9c4361cd3ac2653dde93b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: parsing OTUs into functional guilds
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fusioncatcher-v1.20
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 103894
Depends: gensoft-picard-tools-2.22.0, libc6, gensoft-blat-36, gensoft-star-2.7.3a, gensoft-r-3.6.2, gensoft-bbmap-38.79, gensoft-bowtie-1.2.3, gensoft-graalvm-ce-java8-20.0.0, gensoft-seqtk-1.0-r68e, gensoft-sra-sdk-2.10.2, gensoft-adm-python-2.7.17, gensoft-bowtie2-2.3.5.1, gensoft-ucsc-tools-v390, gensoft-pigz-2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fusioncatcher-v1.20_1.0_amd64.deb
Size: 27500298
MD5sum: debd095b093b1bc7619b900066fbb977
SHA1: 6c9fa5891f1aeaa5437ce21441b94d43b601b3ec
SHA256: 1f79a68553416167c9af4c185084f3132037696b36c705292261d2e9c9973f2a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FusionCatcher searches for novel/known fusion genes, translocations, and chimeras in RNA-seq data (paired-end reads from Illumina NGS platforms like Solexa/HiSeq/NextSeq/MiSeq) from diseased samples.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-fusioncatcher-v1.30
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 102834
Depends: libc6, gensoft-ucsc-tools-v390, gensoft-pigz-2.4, gensoft-picard-tools-2.22.0, gensoft-seqtk-1.0-r68e, gensoft-bowtie2-2.3.5.1, gensoft-bowtie-1.2.3, gensoft-bbmap-38.79, gensoft-star-2.7.3a, gensoft-adm-python-2.7.17, gensoft-graalvm-ce-java8-20.0.0, gensoft-r-3.6.2, gensoft-sra-sdk-2.10.2, gensoft-blat-36
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-fusioncatcher-v1.30_1.0_amd64.deb
Size: 27123736
MD5sum: 2647478caa250ba0cbe485c586f56f9e
SHA1: 31d38f0fdacc8ea75fa4bf6ce8aab37097514953
SHA256: 4b97af262ccd1776e877315083eb2618fd4636459c2601ce0115a9d112b532ce
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: FusionCatcher searches for novel/known fusion genes, translocations, and chimeras in RNA-seq data (paired-end reads from Illumina NGS platforms like Solexa/HiSeq/NextSeq/MiSeq) from diseased samples.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gapfiller-2.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 756
Depends: gensoft-boost-1.72.0, zlib1g, gensoft-zstd-1.4.4, gensoft-xz-5.2.4, libc6, gensoft-gcc-9.2.0, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gapfiller-2.1.2_1.0_amd64.deb
Size: 262788
MD5sum: 7d6655c0394b243d922f253a13cc9a73
SHA1: b9b7fc8c22b7eb69849bcbf3c1e97cee490f6fd1
SHA256: 05b218f5df8d261c20a7bc33950c082bda678d14c84a3c64f68b53bcf49abea7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a seed-and-extend local assembler to fill the gap within paired reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gappa-0.8.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5332
Depends: gensoft-gcc-9.2.0, libc6, zlib1g, bc
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gappa-0.8.2_1.0_amd64.deb
Size: 1947488
MD5sum: 268d372e03fcb01b5886ca7e88d056a8
SHA1: c4df8711d52e98482084512901552ac703014574
SHA256: c694202b0934ffca04f0515722330cf4f5766eb4c23f2678733d42c7eb1e3e61
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gappa is a collection of commands for working with phylogenetic data. Its main focus are evolutionary placements of short environmental sequences on a reference phylogenetic tree
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gappa-0.8.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5711
Depends: libc6, zlib1g, bc, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gappa-0.8.3_1.0_amd64.deb
Size: 2061928
MD5sum: 8522da811694f7dfc0c1dd465c04f2ab
SHA1: fe4cc876a09686923a8685d4fded0f362708ab61
SHA256: 0a7e0a9605c16f9a4a5adf9745a4d5bd80a9ba183993b11ba7f7ba9eb3a20071
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gappa is a collection of commands for working with phylogenetic data. Its main focus are evolutionary placements of short environmental sequences on a reference phylogenetic tree
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gatb-core-1.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 127052
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gatb-core-1.4.1_1.0_amd64.deb
Size: 22972676
MD5sum: 94d9facb830b7ad0a85fb705a6836aee
SHA1: ae4c32e1e59f730177af95744aadf2687545c48e
SHA256: 073f10d6f1a54ba89a6161b4afc6a18be8ab0b455c66984951223d10b8338556
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GATB aka Genome Analysis Toolbox with de-Bruijn graph. gatb-core is a high-performance and low memory footprint C++ library for development purpose
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gautomatch-0.56
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 32723
Depends: gensoft-relion-3.1.1, xdpyinfo, tcsh, libgcc-s1, gensoft-cuda-10.2, libstdc++6, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gautomatch-0.56_1.0_amd64.deb
Size: 14491226
MD5sum: 8e8193e9cfd989064077fa72c5fe653b
SHA1: 9dd063de2384363a9e0d60370ef150deba7e2b73
SHA256: 731c48a0d6ca2049f7722c2b6fc8b72babb75df8eb77e3e90e5cd14c560561e8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fully automatic acccurate, convenient and extremely fast particle picking for EM
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gawk-5.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13822
Depends: libc6, gensoft-mpfr-4.0.2, gensoft-gmp-6.2.0, libtinfo5, libreadline8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gawk-5.0.1_1.0_amd64.deb
Size: 3214806
MD5sum: 9abddfc32b98604662b13154e092a1a5
SHA1: 7bd831ec12c0ed5500bc3abcdbd86f0dd59b7d2a
SHA256: a4f9043f1f1965a1e106cd6dc9da0dec25cb5ed0b05b02c696ecb6c197b8a152
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gawk (GNU implementation of awk) The awk utility interprets a special-purpose programming language that makes it possible to handle simple data-reformatting jobs with just a few lines of code.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gb-taxonomy-tools-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 176
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gb-taxonomy-tools-1.0.1_1.0_amd64.deb
Size: 56850
MD5sum: 752bcfce65a68109f193f2a74234dc0e
SHA1: 855b0d8dc06d5f5012f696ffd434421fc2df17f4
SHA256: 0690880857075b8c99c2687080e976b3649c0df6275ea82b203c87cab047c992
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GenBank taxonomy processing tools
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gbk2ena-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 84127
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gbk2ena-1.0_1.0_amd64.deb
Size: 24568918
MD5sum: bfe7866f79ab0aef6b646598ff8331bb
SHA1: e2add40e1ae386f294e95e8082b6f12efa8eb75a
SHA256: 089a3b154cf0fd466003d4f055635efb9cd32d12947d155fccde20ebd1473190
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gbk2ENA is a command line program that allows a standard Genbank file to be converted into an EMBL-like file suitable for submission to the European Nucleotide Archive (ENA).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gblocks-0.91b
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 123
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gblocks-0.91b_1.0_amd64.deb
Size: 42270
MD5sum: 1311970c3d8a56e30a17446da4e91ee1
SHA1: f55b95f0dfbe33b4de79da7038748b03a2c4407f
SHA256: b9549899b816942cf9cfd0dd4abb76bc77592f04f4653345960a87323ad14f43
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gbwt-1.3.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 19490
Depends: gensoft-libdivsufsort-2.0.1, gensoft-gcc-9.2.0, gensoft-sdsl-lite-2.3.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gbwt-1.3.1_1.0_amd64.deb
Size: 3934404
MD5sum: 999ebbca2d31410b9cacf55cbd641242
SHA1: dc48b49844452cc5fd5db1ef6a953c232a2706e5
SHA256: fd9a52900be9e8dce472fd6ebac50bd0526d4edf66acdd548f6ddb0943756078
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an independent implementation of the graph extension (gPBWT) of the positional Burrows-Wheeler transform (PBWT).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gbwtgraph-0.9
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 15230
Depends: gensoft-gcc-9.2.0, gensoft-libhandlegraph-5e1a64db, gensoft-sdsl-lite-2.3.1, libc6, gensoft-libdivsufsort-2.0.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gbwtgraph-0.9_1.0_amd64.deb
Size: 2722926
MD5sum: 905c8ea9ace4360fd4e9cd88fb282b24
SHA1: d3f8e780f063183b34af763ed18f1bfb5c58c203
SHA256: 9a677517fb6640cd3d3af13af80667890fe0f1b74331398ee4fd47d77f4fafcf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an independent implementation of the graph extension (gPBWT) of the positional Burrows-Wheeler transform (PBWT).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gcc-10.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1674234
Depends: libgcc1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gcc-10.1.0_1.0_amd64.deb
Size: 556421382
MD5sum: 7c5494744d030b572f23fc7da7824af0
SHA1: a3f07445d14b4c79c8b1fd9bd853ad359bbf9c1f
SHA256: b5043e5eb13a522729e3654816f0953abf4535b3fc6d63ece8e382059987f1dc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, Ada, and Go, as well as libraries for these languages (libstdc++, libgcj,...).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gcc-10.4.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1689097
Depends: libgcc1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gcc-10.4.0_1.0_amd64.deb
Size: 560085602
MD5sum: 586823ec663d341520f8ea1e5b8ca2d9
SHA1: 73af305c67bdcd2911760f86c313069478145664
SHA256: d66caa13e5fd0a4ccc36cda64527fccb20c6d73f52280a8745bda0accf73aa30
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, Ada, and Go, as well as libraries for these languages (libstdc++, libgcj,...).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gcc-11.3.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1387065
Depends: libgcc1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gcc-11.3.0_1.0_amd64.deb
Size: 578473740
MD5sum: 4b61a610f6db9fcc8658760d0d2b9d93
SHA1: e7a838d67eb66d8c00155dd6e4c15913d4e02eb2
SHA256: 1d8701d249a9125ff8f83981c723a56b7c3c04fba5a66a5f39e418fb8d1d2f9c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, Ada, and Go, as well as libraries for these languages (libstdc++, libgcj,...).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gcc-8.4.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1303304
Depends: libc6, libgcc1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gcc-8.4.0_1.0_amd64.deb
Size: 440228954
MD5sum: e5e2ee84b506c4b8d08e681c7f733f4d
SHA1: 1f66162c853b9b7ddf6af4427289c4dad8125410
SHA256: 288788b16fb66026445a4a2489830ba3c15b71aea0a2f0c7496a2f6ff9111401
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, Ada, and Go, as well as libraries for these languages (libstdc++, libgcj,...).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gcc-9.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1381145
Depends: libgcc1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gcc-9.2.0_1.0_amd64.deb
Size: 457014584
MD5sum: 530b9e0d47dbed4b402a4ba9141cc24d
SHA1: b6f961f11a070504897f2987034a07b0ac7bae88
SHA256: 78647bd4d8c30765e3bcb5db6690e339d0bd5313dd5ce98d1f598d520ff29076
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, Ada, and Go, as well as libraries for these languages (libstdc++, libgcj,...).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gcc-9.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1382744
Depends: libc6, libgcc1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gcc-9.3.0_1.0_amd64.deb
Size: 457549392
MD5sum: feb36b9516594c92252fea4f2ad201b8
SHA1: 927eebe6947a6c14520a53a7c3d18e4b8e3987e4
SHA256: 2834637366ee774efcd233700b33d07e7c6273fc1bc62c08f601bf005550b76c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, Ada, and Go, as well as libraries for these languages (libstdc++, libgcj,...).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gcc-9.5.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1389409
Depends: libgcc1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gcc-9.5.0_1.0_amd64.deb
Size: 459007796
MD5sum: 753ed4360caad5ecad027b3b61e9f149
SHA1: d04c041cdccbc71fdb97ee253613aa7b8247c44b
SHA256: 9de0249f58b6200fd298083a9745ef5799f85dec3d730fea447628b974f6d45f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, Ada, and Go, as well as libraries for these languages (libstdc++, libgcj,...).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gcta-1.94.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 16305
Depends: gensoft-zstd-1.4.4, zlib1g, gensoft-sqlite-3.31.0, gensoft-gsl-2.6, gensoft-mkl-2020.4.304, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gcta-1.94.1_1.0_amd64.deb
Size: 5405494
MD5sum: 0881f7b32aeb5e471564c18343e856ce
SHA1: e46b792406d5a4b3ce8aae5cf8da577dc5898233
SHA256: 5bb6bbd0d8ed0db8482e7b8c0682a0d7c27207af6ab8f80643247f8651974a0c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GCTA (Genome-wide Complex Trait Analysis) is a software package, which was initially developed to estimate the proportion of phenotypic variance explained by all genome-wide SNPs for a complex trait but has been extensively extended for many other analyses of data from genome-wide association studies (GWASs).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gctf-1.06
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2051
Depends: gensoft-cuda-11.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gctf-1.06_1.0_amd64.deb
Size: 550196
MD5sum: 5e10a47232dba3914f56edcc5f3939dc
SHA1: a5a1f05b179c0c5869abb0443dc604904a2b638a
SHA256: 760d981115b0b446898b75210b497e826b45c26924546454abb3eb7b0522e019
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: accelerated program for accurate and robust, real-time CTF determination of EM Micrographs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gctf-1.18
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 32708
Depends: gensoft-cuda-10.2, libc6, libgcc-s1, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gctf-1.18_1.0_amd64.deb
Size: 14479090
MD5sum: 3c7c3b886633498440030133857d7a89
SHA1: 91e96353be758bc054dc8fb8045bfd4ad3fa6d2d
SHA256: 0656f923db4ee843fb8688648965cdccfe7ffd6eb3d8722fbdcbd2c50278f0dd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: accelerated program for accurate and robust, real-time CTF determination of EM Micrographs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gdal-3.0.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 893001
Depends: gensoft-hdf5-1.10.6, gensoft-libxml2-2.9.10, gensoft-libiconv-1.16, gensoft-proj-7.0.0, gensoft-sqlite-3.31.0, zlib1g, gensoft-pcre-8.43, gensoft-geos-3.8.0, gensoft-xz-5.2.4, gensoft-libjpeg-turbo-2.0.4, gensoft-netcdf-4.7.3, gensoft-curl-7.68.0, gensoft-libtiff-4.1.0, libssl1.1, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gdal-3.0.4_1.0_amd64.deb
Size: 192325592
MD5sum: 4655012092a1f81bbf6e9e7ed1b9b483
SHA1: fab5bfc4e58155395f7ebc4450f01a44cbbfb69f
SHA256: e06e7e2df315d1f5aaa4060c98fe727640e1ea1e70b5c7a71af27c9b1a8cdb74
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: is a translator library for raster and vector geospatial data formats. As a library, it presents a single raster abstract data model and single vector abstract data model to the calling application for all supported formats. It also comes with a variety of useful command line utilities for data translation and processing.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gdb-9.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 150827
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gdb-9.2_1.0_amd64.deb
Size: 56336638
MD5sum: 754f092c3eb02e0a0c827b7350de4fe5
SHA1: 14f217c571c5435cf720c9e2778bb8b661cad520
SHA256: 1ec87fb41e61dfacf1cba65a2e800d97f2afcd4bf5910f757d11e6492dc5b458
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GNU Project debugger
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gdbm-1.18.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1856
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gdbm-1.18.1_1.0_amd64.deb
Size: 597354
MD5sum: 54adb84433378e2cee5f9c6c34317151
SHA1: ffa61df43370bbfbd85c87270d9d3be02717a0e8
SHA256: fd6e4a1f2b54dd6e50265020e1c57de7ef260caaa232f7720a00f40d42970856
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a library of database functions that use extensible hashing and work similar to the standard UNIX dbm.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gdk-pixbuf-2.36.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5086
Depends: gensoft-glib-2.58.3, gensoft-pcre2-10.34, gensoft-libpng-1.6.37, libc6, libpcre3, gensoft-xz-5.2.4, libselinux1, gensoft-xorg-libs-1.1, gensoft-libffi-3.3, gensoft-libjpeg-turbo-2.0.4, zlib1g, gensoft-libtiff-4.1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gdk-pixbuf-2.36.12_1.0_amd64.deb
Size: 1469160
MD5sum: 5f0877aeb2814a0b71dab70dad116a83
SHA1: 89798f3eb552dc91628e20721ff157e315a6ad4e
SHA256: 4d591986f98ad5a55324d9b5eef836016b90d0be31bc33afedc396b6d36a6ca2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GdkPixbuf is a library for image loading and manipulation.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gdk-pixbuf-2.42.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 22486
Depends: gensoft-gdk-pixbuf-2.42.2, libblkid1, gensoft-pcre2-10.34, libmount1, gensoft-libiconv-1.16, gensoft-libffi-3.3, zlib1g, gensoft-libtiff-4.1.0, gensoft-libpng-1.6.37, gensoft-xz-5.2.4, gensoft-libjpeg-turbo-2.0.4, libselinux1, libpcre2-8-0, libc6, gensoft-pcre-8.43, gensoft-glib-2.66.7
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gdk-pixbuf-2.42.2_1.0_amd64.deb
Size: 7326302
MD5sum: 9bb6802c20275b4a30d4fef667168e29
SHA1: edc342592f027198b741e360041a32cb75d1639e
SHA256: 5b4015920d5016805de2e3483f2450325d944d4bfe7810a57de83d9b8bf7baf9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GdkPixbuf is a library for image loading and manipulation.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gdown-4.6.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 98473
Depends: libc6, gensoft-adm-python-3.8.1, zlib1g, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gdown-4.6.0_1.0_amd64.deb
Size: 28708790
MD5sum: da6d2c60758b32c283f6e0ffe19acfd3
SHA1: c27d4b7d626b9eac1accdba5ec0b041bdb7c9a53
SHA256: f7b1a783747329c417f2473920d457fb8473e4a572e5c349296261016b5dad86
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Download a large file from Google Drive
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gemma-0.98.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1587
Depends: zlib1g, gensoft-gsl-2.5, gensoft-openblas-0.3.7, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gemma-0.98.1_1.0_amd64.deb
Size: 790916
MD5sum: 016100ae52650770e4d38e8849c25e54
SHA1: 5f2ba9da36348c42974d34add0a04ecf381fe73f
SHA256: 6d50c3c6edfc94cd50368fe7956030280c2fadb859aef8e0ece462282a78c775
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: software implementing the Genome-wide Efficient Mixed Model Association algorithm for a standard linear mixed model and some of its close relatives for genome-wide association studies (GWAS)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gemsim-v1.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 87357
Depends: gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gemsim-v1.6_1.0_amd64.deb
Size: 29941502
MD5sum: 078783e9e720f00f41e664d7015402f7
SHA1: 4dff7dad49264293866a10547120d48a73d58c04
SHA256: 6d1a336744b0827c5e5fddf091a98f214126df777ef948a9c34ba764fb2b17d0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: software package for generating realistic simulated next-generation sequencing reads with quality score values
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genecluster-1.59
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1159
Depends: gensoft-freetype-2.10.1, gensoft-xorg-libs-1.1, libc6, zlib1g, gensoft-libpng-1.6.37, gensoft-lesstif-0.95.2, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genecluster-1.59_1.0_amd64.deb
Size: 557474
MD5sum: fca237e1de0cac99f59c2a0b5269790b
SHA1: 9cfe2ce25ae733c9543022b77c712ef1ee7c9a00
SHA256: cc4e39ce3644524c623ee723b3f1babd64ffdcac0f370026fd2e70906240b88a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: open source clustering software
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genehunter-2.1-r2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 541
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genehunter-2.1-r2_1.0_amd64.deb
Size: 248422
MD5sum: eec8bfc3a5a7c1d2b2431f33756045e8
SHA1: e09b1d5d592ce1bbc702422dbe2c59874ba0852e
SHA256: befc520c7cc584e224836886945a76ed511cf169612a9fb9f9441585f6753a3c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multipoint analysis of pedigree data including non-parametric linkage analysis, LOD-score computation, information-content mapping, haplotype reconstruction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-geneid-v1.4.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7955
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-geneid-v1.4.4_1.0_amd64.deb
Size: 2687094
MD5sum: 8e3c67799d1894b448fcf436a429f36e
SHA1: 2e77dae9d0b29105fb08c3691c3ee67c348f9381
SHA256: 5d945ed41efd9c91daabaf7ad06614640f0bb1c5707b45a046e43a3fe10fa1ad
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program to predict genes in anonymous genomic sequences designed with a hierarchical structure. In the first step, splice sites, start and stop codons are predicted and scored along the sequence using Position Weight Arrays (PWAs). In the second step, exons are built from the sites. Exons are scored as the sum of the scores of the defining sites, plus the the log-likelihood ratio of a Markov Model for coding DNA. Finally, from the set of predicted exons, the gene structure is assembled, maximizing the sum of the scores of the assembled exons. geneid offers some type of support to integrate predictions from multiple source via external gff files and the redefinition of the general gene structure or model is also feasible. The accuracy of geneid compares favorably to that of other existing tools, but geneid is likely more efficient in terms of speed and memory usage.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genemark-es-4.69
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 237407
Depends: gensoft-adm-python-3.8.1, gensoft-adm-perl-5.30.1, libc6, zlib1g, libgcc-s1, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genemark-es-4.69_1.0_amd64.deb
Size: 83923934
MD5sum: 12903ad9e92a4d0659923e161c0a6cfe
SHA1: d5223526775fa62e270f200949f7335b7adf231f
SHA256: 23290e54285a54233fcb9bbcb0818219742c80a84c26b3c80360da236f8eb2da
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A family of gene prediction programs developed at Georgia Institute of Technology, Atlanta, Georgia, USA
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gengen-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1306
Depends: libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gengen-1.0.1_1.0_amd64.deb
Size: 541422
MD5sum: ffe570a1e97b9b69ee9d88a4c0cb3cc2
SHA1: 6b7de860841205f90b0552ca345d8bc0082a6566
SHA256: ceed047dc78a939e06a6818eb0b6d11c6f6a1d88c1a39bf008299082ecef468e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a suite of free software tools to facilitate the analysis of high-throughput genomics data sets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genomeanalysistk-4.1.9.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 471509
Depends: gensoft-java-1.8.0, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genomeanalysistk-4.1.9.0_1.0_amd64.deb
Size: 449491756
MD5sum: c6fec1d9d4edebe0cb4387113a2aea08
SHA1: 3a6d20e33f2fa15aaf46fa88891e8960860eb121
SHA256: 7d4ce39202c3070599a8a2893d78106f45c9d076d5ad9ca2823dbbb42758a301
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: software library that makes writing efficient analysis tools using next-generation sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genomemapper-0.4.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 351
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genomemapper-0.4.4_1.0_amd64.deb
Size: 202546
MD5sum: 84ec6e4183222186e1300f83931ee0ce
SHA1: 6b625a688ff2a489050b36f334249e6700c1e74b
SHA256: 768f354e2921bfcb2fe663dc26b2d3a594ae2d059b10841c6956ac220458d516
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Short read mapping tool
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genomethreader-1.7.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 26115
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genomethreader-1.7.3_1.0_amd64.deb
Size: 9918310
MD5sum: 4e8210003a40107308ae29390fc262ff
SHA1: 9c33f68340df220d4f1c39273cba8c0ad6f63060
SHA256: 79d31346cdec636bb62514725131bc723c12aad9230d7406d2c86758f58f75c2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software tool to compute gene structure predictions. The gene structure predictions are calculated using a similarity-based approach where additional cDNA/EST and/or protein sequences are used to predict gene structures via spliced alignments.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genometools-1.5.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 87149
Depends: gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genometools-1.5.9_1.0_amd64.deb
Size: 27573636
MD5sum: 8db91b271bbc8d6bbee186b51ab7e722
SHA1: 1a5f2a4f560c5a3cbea7b086992ad2b3931d65ec
SHA256: 6e88f62fcb9f38f38f9aed37e76797e84357d9cac6a48bc8f81cdd5cc2391801
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GenomeTools genome analysis system is a free collection of bioinformatics tools (in the realm of genome informatics) combined into a single binary named gt. It is based on a C library named libgenometools which contains a wide variety of classes for efficient and convenient implementation of sequence and annotation processing software.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genometools-1.6.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 78900
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genometools-1.6.1_1.0_amd64.deb
Size: 25055320
MD5sum: 9975f4138e0ae8aa9e69d755b8628f5b
SHA1: e63a048d48a5b3287c32ca0ef3dc6dad99e0c240
SHA256: cccf324605bac3aab9dfe5eecb78d6e7343e56b80f05d95ee6801f2158af43af
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GenomeTools genome analysis system is a free collection of bioinformatics tools (in the realm of genome informatics) combined into a single binary named gt. It is based on a C library named libgenometools which contains a wide variety of classes for efficient and convenient implementation of sequence and annotation processing software.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genomicconsensus-2.3.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 788624
Depends: gensoft-singularity-3.8.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genomicconsensus-2.3.3_1.0_amd64.deb
Size: 803062728
MD5sum: 98732b58512e814c913eb858367a3e26
SHA1: 15abadf3cfcd74a5ed353978de21d27916a87457
SHA256: a295b139b25a82335267b0074e3124419787bccb4927f2d8122eaa01d25a564f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This tool gets a CRISPR profile by identifying the presence of known spacers and direct repeats (DRs) in a given sequence based on a catalogue.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-genrich-0.6.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 464
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-genrich-0.6.1_1.0_amd64.deb
Size: 174276
MD5sum: 53af8a3ddb6382fa943c591aa5ed89c8
SHA1: 82cf03a829189392610062b1a6bab27a9e361999
SHA256: 32a10e146bfaf6826cf3f8e1317c6f6f2e737cf9b243aa503838ac8da3fa479c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Genrich is a peak-caller for genomic enrichment assays (e.g. ChIP-seq, ATAC-seq). It analyzes alignment files generated following the assay and produces a file detailing peaks of significant enrichment.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-geos-3.8.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 190907
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-geos-3.8.0_1.0_amd64.deb
Size: 45898400
MD5sum: 05f50f3d7aaa1cdc94fea21b594b5dc3
SHA1: 6af38047f763db265fa8ece4c3bb20a24f18a19f
SHA256: 43b655baae2d3ec114d6023e34d31791638021451adb29d7b486d5c3c39d301e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GEOS (Geometry Engine - Open Source) is a C++ port of the Java Topology Suite (JTS). As such, it aims to contain the complete functionality of JTS in C++. This includes all the OpenGIS Simple Features for SQL spatial predicate functions and spatial operators, as well as specific JTS enhanced topology functions
License: unknown
Vendor: Institut Pasteur

Package: gensoft-germline-1.5.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 257
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-germline-1.5.3_1.0_amd64.deb
Size: 90020
MD5sum: 56c810bdf6a841ae7234f0e8e9ea6c34
SHA1: 8c135732e60b2d68113c7fbb61781d6f80a1191e
SHA256: 1723154e20093b6ca42717d944f3534b785d77d685a65fe5ca9f9e87888a577c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GERMLINE is an algorithm for discovering long shared segments of Identity by Descent (IBD) between pairs of individuals in a large population
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gettext-0.20.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 35223
Depends: libncurses5, gensoft-libiconv-1.16, gensoft-gcc-9.2.0, libtinfo5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gettext-0.20.1_1.0_amd64.deb
Size: 11199246
MD5sum: ea55a770aa1c3a4d025355cbcba2fbdd
SHA1: e01c9eae19beea9134a2f32593aa8d338930d264
SHA256: 870765e3ba4f28316df457765faebbf7e8cce6135c768bca40223b1576db9733
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Gettext package contains utilities for internationalization and localization.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gfaffix-0.1.2.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 6202
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gfaffix-0.1.2.4_1.0_amd64.deb
Size: 1770486
MD5sum: c2b4d85c333e11573f5790852eb7cee6
SHA1: 5a93e12bc17d862c2a492641f813a75995856375
SHA256: d3613a1f748c14812912daaa4e9012403696ac8311a1b650f612415c26dbdf5b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gfaffix-0.1.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 71558
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gfaffix-0.1.4_1.0_amd64.deb
Size: 12886934
MD5sum: 1df8d80a52c72ca74c0e6f20f2c61971
SHA1: a7dd84c5d913de54789d9758a4dc00a2acd06c86
SHA256: efb9763b46ac66e73dccf556d7685357ca2ed0fd23e67186c2453528442e9be6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gfatools-0.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 591
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gfatools-0.5_1.0_amd64.deb
Size: 214292
MD5sum: 183b200d9c7c33cbd64baf1f565a99f6
SHA1: eb98a2139c8d4cb75a76082cf6ae1c411ce6eb22
SHA256: ced439fc037f95ada5cc50e609b74861517dd11f29276554acae6eef5a62706f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tools for manipulating sequence graphs in the GFA and rGFA formats
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gff3toembl-1.1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7648
Depends: gensoft-genometools-1.6.1, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gff3toembl-1.1.4_1.0_amd64.deb
Size: 2350698
MD5sum: eccdecca0a802010282e1949f2f447b8
SHA1: b7ef39aeb64eae8058132ce8c91185c97ea98f9b
SHA256: 9589e4c4f37636b35b55b1b5ef5ba4bf2ed9897e5d07b8c78376ce210a6ca4ce
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: converts GFF3 files from the most commonly use prokaryote annotation tool Prokka into a format that is suitable for submission to EMBL.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gffread-0.12.7
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1781
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gffread-0.12.7_1.0_amd64.deb
Size: 620744
MD5sum: 853682f57d949eb4276b573d8b30265c
SHA1: 6b0880a3c505791961845f923b6cf5f07df70840
SHA256: 155ec1fee98094fa73ec0b3977b4ae0b51e5607f77d831c343bffc7497682015
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gflags-2.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 461
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gflags-2.2.0_1.0_amd64.deb
Size: 174400
MD5sum: 5cd78d57217803ef122cf1f98bebbff2
SHA1: 5ba2de9bb1ff4158875948279d79c8a2b796bbb5
SHA256: 14352511be9ef939aba8d87383172003477fcef6c6e5b9084c213c2f09d4dcc3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ library that implements commandline flags processing.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ggcat-0.1.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 836289
Depends: libgcc-s1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ggcat-0.1.0_1.0_amd64.deb
Size: 78029986
MD5sum: fe6121bcc68615312772d4953dc3c11b
SHA1: 1b6a482c5cb0382197f7b67646e3a5b41f7c6985
SHA256: 5034602226757b6562ff19de464880205c31a8cf884fecf0efd760abf1b47277
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GGCAT is a tool for building compacted (and optionally colored) de Bruijn graphs from raw sequencing data or for merging multiple existing cDBG in a single graph. It also supports sequence queryies to either a colored or non-colored graph (i.e. number/percentage of present kmers).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ghmm-0.9-rc3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4149
Depends: gensoft-libiconv-1.16, zlib1g, libc6, gensoft-xz-5.2.4, gensoft-libxml2-2.9.10, gensoft-gsl-2.6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ghmm-0.9-rc3_1.0_amd64.deb
Size: 1187318
MD5sum: 5b7d32ab3ecf759339117245e20ef0e5
SHA1: 2bac9965845db617dcca2ff02f80e4282a42f3bf
SHA256: 861a87b678e869f588a1fbf86782905066951e6d86b11875a42f09e8f485a8f8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: General Hidden Markov Model library (GHMM) is a freely available C library implementing efficient data structures and algorithms for basic and extended HMMs with discrete and continous emissions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ghostscript-9.50
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 61198
Depends: gensoft-adm-perl-5.30.1, gensoft-freetype-2.10.1, gensoft-expat-2.2.9, gensoft-fontconfig-2.13.91, libbz2-1.0, zlib1g, gensoft-libtiff-4.1.0, gensoft-libjpeg-turbo-2.0.4, gensoft-xz-5.2.4, libc6, gensoft-libpng-1.6.37
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ghostscript-9.50_1.0_amd64.deb
Size: 31917644
MD5sum: 3e9cb105238831739c6028180732c7c5
SHA1: c7582cbf1b0cb7a83f77120c0151d759b435e23b
SHA256: d43e7bb638c8996232c5a3a56386d83a77169168688ade44fc67cb38287025ea
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an interpreter for the PostScript language and for PDF.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gi2taxonomy-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7
Depends: gensoft-adm-python-2.7.17, gensoft-taxonomy-97aef0c05300
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gi2taxonomy-1.0_1.0_amd64.deb
Size: 4282
MD5sum: d8dc4dd93e2c86ee19289cca6d709bc1
SHA1: 960783e6ecab27786e9c4bb467d52b61a75df397
SHA256: 80826deae97dc1cb7bbe8a8e1df805695316873858a1a06cbe2b67df812d36ad
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fetch taxonomic representation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-giac-1.5.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 900599
Depends: gensoft-xorg-libs-1.1, gensoft-libpng-1.6.37, gensoft-fltk-1.3.5, libncurses5, zlib1g, gensoft-pari-2.9.5, gensoft-fontconfig-2.13.91, gensoft-adm-perl-5.30.1, gensoft-libjpeg-turbo-2.0.4, gensoft-glu-9.0.1, libreadline8, gensoft-blas-3.8.0, gensoft-expat-2.2.9, libtinfo5, gensoft-mpfr-4.0.2, gensoft-mesa-19.0.8, gensoft-libdrm-2.4.100, gensoft-gcc-9.2.0, gensoft-ntl-11.4.3, gensoft-gsl-2.6, libbz2-1.0, gensoft-freetype-2.10.1, libc6, gensoft-gmp-6.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-giac-1.5.0_1.0_amd64.deb
Size: 185673326
MD5sum: 7db858cd036566f36e30e7bc78522f2b
SHA1: 7261f9508fc0364af005fe4445f127cb0deeee04
SHA256: faaa36dfbc0d4277b37ec8743dd1e180e8365205f6c985c6cc5ac9d07b894503
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Giac is a C++ library, it is the CAS computing kernel, it may be used inside other C++ programs, and also Python, Java and Javascript programs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-giflib-5.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 460
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-giflib-5.2.1_1.0_amd64.deb
Size: 177944
MD5sum: b9576913b362704ed8fad77877fa0e18
SHA1: db6a8b948a47fd12200ca5321ecf1aa9ae466291
SHA256: 69688750d15e3a4dca6d83e36d030bee9c719078786740833b8690b69e8f492f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GIFLIB is a package of portable tools and library routines for working with GIF images.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ginac-1.7.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 241609
Depends: libc6, libncurses5, gensoft-gmp-6.2.0, libtinfo5, libreadline8, gensoft-cln-1.3.6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ginac-1.7.8_1.0_amd64.deb
Size: 47120900
MD5sum: 812e07c65cd7a1bb79452f6db76c8e49
SHA1: 0992dccd45e68971b051a464f93aecb9e6e1b673
SHA256: 6f610693b0b18f36553a4bc3dad12bdc7daf7e5d948160b0a9341a3169225449
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GiNaC is a C++ library designed to allow the creation of integrated systems that embed symbolic manipulations together with more established areas of computer science under one roof
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gingr-1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 42092
Depends: libc6, libbz2-1.0, gensoft-glib-2.58.3, gensoft-harfbuzz-2.6.4, gensoft-libpng-1.6.37, gensoft-pcre2-10.34, gensoft-icu-65.1, gensoft-qt-5.12.1, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gingr-1.3_1.0_amd64.deb
Size: 13071546
MD5sum: 5b4dea58aba0fbe451efca8c5e0dfa86
SHA1: 968d29305f48147ddfae873c7817e614b1c4be13
SHA256: f0320c26ad2a6b660867d50c733351e6dd62365ec32b0c86a62f69f144509593
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Gingr is an interactive tool for exploring large-scale phylogenies in tandem with their corresponding multi-alignments. Gingr can display informative overviews for hundreds or thousands of genomes, while allowing researchers to move quickly to more detailed views of specific subclades and genomic regions, even down to the nucleotide level of their multi-alignments.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-git-2.25.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2690771
Depends: libssl1.1, libc6, gensoft-curl-7.68.0, gensoft-adm-perl-5.30.1, zlib1g, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-git-2.25.0_1.0_amd64.deb
Size: 72666758
MD5sum: 3b8cf8a3dc113364c2eb8ab946889a21
SHA1: a9eb86f196e0923a6998c5a04d00781f6341436d
SHA256: 7b4e8b5d9aa20afb482d2467c18ec63326f81eb15722d64f72cf14b728e8e881
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency
License: unknown
Vendor: Institut Pasteur

Package: gensoft-git-2.39.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 3479614
Depends: gensoft-adm-python-2.7.17, libssl1.1, gensoft-adm-perl-5.30.1, gensoft-curl-7.68.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-git-2.39.1_1.0_amd64.deb
Size: 67393068
MD5sum: e7a3696633638cd620f062d56826125e
SHA1: 336f8bbc9c7a00a02255fb0dc97970e6738319ac
SHA256: eb5678d199a95fa22a90174c8dc72400843e0f4110d45d2a477efb64fb8f4a4d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glib-2.58.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 29034
Depends: libmount1, libpcre2-8-0, libselinux1, libmount-dev, libblkid1, zlib1g, gensoft-pcre2-10.34, gensoft-libffi-3.3, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glib-2.58.3_1.0_amd64.deb
Size: 9263682
MD5sum: 05219a68b387243bc40efdaeed653d5f
SHA1: 6472b89d575aa7e7236d98c5a57cbbbdbf53595f
SHA256: 960c538e11c2856a1cddef26763d8cb348d507cf23a2aa68005d418641704717
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GLib provides the core application building blocks for libraries and applications written in C. It provides the core object system used in GNOME, the main loop implementation, and a large set of utility functions for strings and common data structures.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glib-2.66.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30325
Depends: gensoft-glib-2.66.7, libblkid1, libglib2.0-0, gensoft-pcre-8.43, gensoft-libiconv-1.16, gensoft-libffi-3.3, gensoft-gobject-introspection-1.66.1, libmount1, libc6, libpcre2-8-0, libpcre3, gensoft-adm-python-2.7.17, gensoft-pcre2-10.34, gensoft-adm-python-3.8.1, libffi7, zlib1g, libselinux1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glib-2.66.7_1.0_amd64.deb
Size: 9681776
MD5sum: b27c202a8a61b1769e522611dd65c7d4
SHA1: 5332ee6762907053c43a96eac0e8931ba24c1e03
SHA256: 8384c1b330997934dcfebe2814b1a228b7424b63f31d7b6ba46846188774ff31
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GLib provides the core application building blocks for libraries and applications written in C. It provides the core object system used in GNOME, the main loop implementation, and a large set of utility functions for strings and common data structures.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glibmm-2.58.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30916
Depends: zlib1g, libpcre2-8-0, libblkid1, libmount1, gensoft-libffi-3.3, libc6, gensoft-gcc-9.2.0, gensoft-glib-2.58.3, libselinux1, gensoft-libsigc++-2.10.4, gensoft-pcre2-10.34
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glibmm-2.58.1_1.0_amd64.deb
Size: 10507718
MD5sum: ff5e98de5e33ded027133b9131b1c78c
SHA1: 121b7434e7690cf983e175b48b9af02c5214e3ce
SHA256: 2bf1d1198b2e7c715db93eb67ce391da7c0936e4099abc06ab014e61ab600c6e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ API for parts of glib that are useful for C++.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glimmer-3.02
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5610
Depends: libc6, gensoft-elph-1.0.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glimmer-3.02_1.0_amd64.deb
Size: 1971838
MD5sum: a0bd79ac179d23b93b4e5222dccdb565
SHA1: 9a1932c318174403ff51ccdfea8a26def736d697
SHA256: 094b304c1f69918843716d5dcb1836177a064e625c25121a2a7e1e992010b4b0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a system for finding genes in microbial DNA, especially the genomes of bacteria, archaea, and viruses.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glimmerhmm-3.0.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 138593
Depends: gensoft-gcc-9.2.0, libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glimmerhmm-3.0.4_1.0_amd64.deb
Size: 45620288
MD5sum: 2f7b90d5e3c5f9e3a59e83739323b2a3
SHA1: 58e662a5aca1afb15edab690488df8742eb7df45
SHA256: 35d9e3d8650781e0bbe7d723a262297446b64efe8b6a1a19daed4eb9905fa80e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GlimmerHMM is a new gene finder based on a Generalized Hidden Markov Model (GHMM). Although the gene finder conforms to the overall mathematical framework of a GHMM, additionally it incorporates splice site models adapted from the GeneSplicer program and a decision tree adapted from GlimmerM.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glimpse-1.1.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 48647
Depends: libc6, gensoft-xz-5.2.4, libbz2-1.0, gensoft-boost-1.72.0, gensoft-zstd-1.4.4, gensoft-htslib-1.13, gensoft-curl-7.68.0, zlib1g, libssl1.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glimpse-1.1.1_1.0_amd64.deb
Size: 47985594
MD5sum: 2f2eb580db9e9d8e99690e5e3d8bada6
SHA1: e7c3a5b5301525f3c061b595bb79b35d48bb32ba
SHA256: ed162e214cb75431900203f6450b702cce0add5ab1b7872f704b98a576206de2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Genotype Likelihoods IMputation and PhaSing mEthod is a phasing and imputation method for large-scale low-coverage sequencing studies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glog-0.4.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5240
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glog-0.4.0_1.0_amd64.deb
Size: 1191306
MD5sum: 02bc936fd2127fc5b0d1d1910bd0c549
SHA1: d770988661b09c4f4fb38736bf9ff5e871b20843
SHA256: 3afe1a8612a0195d488002c43349a3248ec16b9f98dc0ecfca643b9f9e43ff35
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ implementation of the Google logging module.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glost-0.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 70
Depends: gensoft-openmpi-4.0.5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glost-0.3.1_1.0_amd64.deb
Size: 25972
MD5sum: aa414395b4fb4f08e0031cfec8974000
SHA1: ebcbf86795679b781e0241921af0fdd45b2506c0
SHA256: 68c57ebbb06fb35e892dee6c9f2381a3a54deb2710664e0612a8c68558ff7107
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Greedy Launcher Of Small Tasks
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glpk-4.65
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13807
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glpk-4.65_1.0_amd64.deb
Size: 5308678
MD5sum: 300cd5975f66351085169e54703b0b14
SHA1: db61f6be05b2686f604e2cc61ed727f9040c51c8
SHA256: 017ae883e5f0441508d65c51f58eed86a009db9d8079bec12b8e0f1c75c26906
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The GLPK (GNU Linear Programming Kit) package is intended for solving large-scale linear programming (LP), mixed integer programming (MIP), and other related problems. It is a set of routines written in ANSI C and organized in the form of a callable library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-glu-9.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9868
Depends: gensoft-gcc-9.2.0, gensoft-xorg-libs-1.1, gensoft-expat-2.2.9, zlib1g, gensoft-libdrm-2.4.100, libc6, gensoft-mesa-19.0.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-glu-9.0.1_1.0_amd64.deb
Size: 2772330
MD5sum: 4d8fa7534aa6e974c56c544e37d2c146
SHA1: 4d70ab6122d72d701640eb8f556a0682b771c64c
SHA256: 2725f177dbbc71a54d90c9a20410a4ca2cf73bf69faabb4c2e6be4c8574e66fe
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: the Mesa OpenGL Utility library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gmap-2015-07-23
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 70681
Depends: libbz2-1.0, libc6, zlib1g, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gmap-2015-07-23_1.0_amd64.deb
Size: 22327624
MD5sum: 5aea02792ccbc9473228b4c0786370b5
SHA1: cf46ac02c4d599e16aad3cb29ab9f3733db884e3
SHA256: 3158c17bc7601ebda9cb3b7ebda1bd2ddb08955c99f5954371e9136d3863a564
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Genomic Mapping and Alignment Program for mRNA and EST Sequences, Genomic Short-read Nucleotide Alignment Program
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gmap-2019-09-12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 39692
Depends: zlib1g, gensoft-adm-perl-5.30.1, libc6, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gmap-2019-09-12_1.0_amd64.deb
Size: 14875434
MD5sum: a961d8302a1e26bb30ca995638c44823
SHA1: b49fc1cfbbf353f7b63fb6e428154ea8c9da9e1b
SHA256: 2bad8a7b34863f7c12675525ba85fb0b1290be02df1e1748127270a9141e6302
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Genomic Mapping and Alignment Program for mRNA and EST Sequences, Genomic Short-read Nucleotide Alignment Program
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gmconvert-20191105
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2191
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gmconvert-20191105_1.0_amd64.deb
Size: 1324590
MD5sum: 29feb2d6acc74276da33700fa8ba051b
SHA1: b30e34e0353dc432a8d7839ae6e3a7047f848046
SHA256: 66c18db1b91cae89b37987b0674b8da1a517cbc0d4c6faf0ebada921fe760ef0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gmconvert converts both a 3D density map and an atomi model into GMM (gaussian mixture model). EM (expectation maximization) algorithm is employed for covertion into GMM. The program gmconvert also has many other useful functions to handle GMM.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gmfit-20190921
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1951
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gmfit-20190921_1.0_amd64.deb
Size: 1047596
MD5sum: b8a88ad65d346e2bfbbd128a134dcfb4
SHA1: 12f49d2813d02e313d5b48e723b6a269ad2f8c41
SHA256: 1bf4ad15e1209c325451fd46c047cfb19348975f33deefbd65efe340a94ab166
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: superimpose several subunit atomic models determined by X-ray crystallograph or NMR into the low resolution 3D density map detemined by electron microscopy
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gmp-6.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2621
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gmp-6.2.0_1.0_amd64.deb
Size: 799958
MD5sum: 614ff8db3ef189152504a8375834dbc3
SHA1: 3f0ac3d8b7f9590bcc7fd10de43dbd35f0939310
SHA256: e311dd558ecad7ee86166c0033f444b43f12066139bc09eca59cd692d34ad52d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: is a free library for arbitrary precision arithmetic, operating on signed integers, rational numbers, and floating-point numbers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gnina-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 381556
Depends: gensoft-maeparser-1.2.4, gensoft-python-3.8.1, gensoft-lapack-3.9.0, zlib1g, gensoft-icu-65.1, gensoft-gflags-2.2.0, gensoft-libmolgrid-0.2.1, gensoft-boost-1.72.0, libbz2-1.0, gensoft-glog-0.4.0, gensoft-openblas-0.3.7, gensoft-zstd-1.4.4, libgcc-s1, gensoft-cuda-11.2, gensoft-gcc-9.2.0, libc6, gensoft-rdkit-2021-03-4, gensoft-hdf5-1.10.6, gensoft-coordgenlibs-2.0.3, gensoft-openbabel-3.1.1, gensoft-xz-5.2.4, gensoft-protobuf-3.11.3, libcrypt1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gnina-1.0.1_1.0_amd64.deb
Size: 210415512
MD5sum: 71168e63115a18ce7978ab89675feae3
SHA1: 8777ca8ae619559b1874551817380005846a28f5
SHA256: bfdcb9b9ea0da5a9a1752b6db159c90af2cd70cec770183f51e8f5074173574a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gnina-1.0.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 436666
Depends: gensoft-xz-5.2.5, zlib1g, libgcc-s1, gensoft-openblas-0.3.7, gensoft-maeparser-1.2.4, gensoft-icu-65.1, gensoft-boost-1.72.0, gensoft-openbabel-3.1.1, gensoft-glog-0.4.0, gensoft-libmolgrid-0.5.2, gensoft-hdf5-1.10.6, libbz2-1.0, gensoft-coordgenlibs-2.0.3, gensoft-zstd-1.4.4, gensoft-lapack-3.9.0, gensoft-rdkit-2021-03-4, gensoft-protobuf-3.11.3, gensoft-cuda-11.7, libc6, libcrypt1, gensoft-adm-python-3.8.1, gensoft-gflags-2.2.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gnina-1.0.2_1.0_amd64.deb
Size: 221265916
MD5sum: 4e39c427b5cb36ebe4d5fdb6cc3cd6f8
SHA1: c03c801b5bc28048e73cd0101b83e9e9946ab869
SHA256: c8858ba3d92b9f3987b2b4290f6c700a716c76c23601e5d1ee60add1916c2a2f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gnuplot-5.2.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8856
Depends: libblkid1, gensoft-libjpeg-turbo-2.0.4, gensoft-libtiff-4.1.0, gensoft-fontconfig-2.13.91, gensoft-libffi-3.3, gensoft-xz-5.2.4, gensoft-gtk+-2.24.32, gensoft-pango-1.42.4, libreadline8, gensoft-libpng-1.6.37, libc6, gensoft-wxwidgets-3.1.3, gensoft-glib-2.58.3, libtinfo6, gensoft-cairo-1.16.0, libbz2-1.0, gensoft-gdk-pixbuf-2.36.12, gensoft-libgd-gd-2.2.5, gensoft-expat-2.2.9, libncurses6, gensoft-atk-2.9.4, gensoft-pcre2-10.34, libpcre2-8-0, gensoft-pixman-0.38.4, gensoft-harfbuzz-2.6.4, libselinux1, libfribidi0, zlib1g, libmount1, gensoft-libcerf-1.13, gensoft-xorg-libs-1.1, gensoft-gcc-9.2.0, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gnuplot-5.2.8_1.0_amd64.deb
Size: 3255212
MD5sum: 86b45df9af0bbf718a26527bb33542a5
SHA1: d46a684817d94deeddde630c28e2de98d1c58f86
SHA256: 5a715030aaa5d30ff56b9ace5e646b1318d691bf324d832cb9d6ea55ec4b4ad8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A scientific plotting package, features include 2D and 3D plotting, a huge number of output formats, interactive input or script-driven options
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gnutls-3.6.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 23093
Depends: libc6, gensoft-gcc-9.2.0, gensoft-gmp-6.2.0, zlib1g, gensoft-nettle-3.5.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gnutls-3.6.11_1.0_amd64.deb
Size: 7909300
MD5sum: 6b41dbddd0b254e5d30f0de4eae7d258
SHA1: 2a3b97997d84ea873dcdaf1355668596c72e411c
SHA256: e4ecc9ec700687802c36b30fd3073fb65c0e47037f29ab496d7a07a32172f89a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GnuTLS is a secure communications library implementing the SSL, TLS and DTLS protocols and technologies around them.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-go-1.13.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 319873
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-go-1.13.6_1.0_amd64.deb
Size: 119433840
MD5sum: 2c632796c935eec5ba89a02bc123fc43
SHA1: c75cd2acd23ae8ebd1c005e647efceea9869e312
SHA256: d2e6c0219a89d1d4b11c5d0ed890274a425c413b02ec08c25d740b74dbe495b0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Go programming language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-go-1.15.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 355146
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-go-1.15.7_1.0_amd64.deb
Size: 120424452
MD5sum: 2c43215289c206a8fb82ca84bfad5948
SHA1: 8c4fbd4b49bc12c546b9847baaa1ea7e1c5f2c5e
SHA256: 520b98fbfd03a9e6fbbd2f1f27badcc645a85f77da65b850b3f5ca12b942f6a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Go programming language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-go-1.17.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 398280
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-go-1.17.6_1.0_amd64.deb
Size: 133910792
MD5sum: e21d6f61afb213b7ce3546e2bf593b1f
SHA1: f4226fbfac42393fe88b78b97ee713fd4ae62cb2
SHA256: 83ef95a67858a50ed5f10023ad0b01624503d7dfa954f057b2a6b772a1cf37c7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Go programming language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-go-1.19.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 447840
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-go-1.19.1_1.0_amd64.deb
Size: 147624654
MD5sum: 28ee6b674f228582b99a74273020110a
SHA1: dc7f8526075831bfb329eec395f09336745e65d4
SHA256: 814fd0cd7fa6fe8b131766d2238a0a4fcf64e18b93a74bc339b377c2924e2587
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Go programming language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-go-1.21.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 208741
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-go-1.21.4_1.0_amd64.deb
Size: 66668472
MD5sum: 6a259da91ca19207e20a86111108baad
SHA1: 5dcaccff003e3f2ea30db7c2a9c270e4ed567cfa
SHA256: 745e4ab0b46678932a063d22b934a028b332b6c2376bde0db6154e002c81ca03
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Go programming language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-goalign-0.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14986
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-goalign-0.3.1_1.0_amd64.deb
Size: 4827028
MD5sum: 7cff16ba473796bbc809ccc53c223012
SHA1: a34f88581ea2a4820c68e7984b25f8843b57549a
SHA256: 7acbc61dc992e9175a37dd35f41849b165b589c033528004fa5a71e1d42460d5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GoAlign is a set of command line tools to manipulate phylogenetic trees. It is implemented in Go language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-goalign-0.3.5
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 13814
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-goalign-0.3.5_2.0_amd64.deb
Size: 7196400
MD5sum: 56834c12b36822cf1f77d698788e64e5
SHA1: 67f1cd732041c3da618bdc27b87fbe419be7d50e
SHA256: d46a9031afd9f765ef7f76a9a79cb6be16ad158eaa27968aeb1db146174da743
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GoAlign is a set of command line tools to manipulate phylogenetic trees. It is implemented in Go language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-goalign-0.3.6
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 14763
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-goalign-0.3.6_1.0_amd64.deb
Size: 8155550
MD5sum: 5e817c56c76695f2241beafbcfaf3d31
SHA1: ae17721d02e233b28e5b3fca2f04008c3889268b
SHA256: e0d2ac7fbb5c6c01d475c3b017c4354bb8229481afacc5b4b024d9623cb56c3e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GoAlign is a set of command line tools to manipulate phylogenetic trees. It is implemented in Go language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gobject-introspection-1.66.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 16759
Depends: gensoft-pcre2-10.34, gensoft-glib-2.66.7, gensoft-libiconv-1.16, libblkid1, gensoft-libffi-3.3, libselinux1, zlib1g, libpcre2-8-0, libc6, libmount1, gensoft-adm-python-3.8.1, gensoft-pcre-8.43
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gobject-introspection-1.66.1_1.0_amd64.deb
Size: 2621596
MD5sum: 5503a88d6baeb388921fc8663f535917
SHA1: 3842cfdc40894843008919f735833998d735bcd7
SHA256: 8f8459d07ab6acf68667168310a09f3e58bbe7023311f3614db22448166b4998
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GObject introspection is a middleware layer between C libraries (using GObject) and language bindings.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gold-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 527
Depends: libc6, gensoft-simwalk2-2.91, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gold-1.1.0_1.0_amd64.deb
Size: 220688
MD5sum: 1134970640fdbe91793e193eccb2e4b9
SHA1: b03626387907d5018e54423fb53efd9f4bd32583
SHA256: 5235b4c42dccc1f4051971e94eb05bcdf70528d1df412cfdc1be7ddfac6f628e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Graphical Overview of Linkage Disequilibrium
License: unknown
Vendor: Institut Pasteur

Package: gensoft-golden-3.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 515
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-golden-3.4.1_1.0_amd64.deb
Size: 188626
MD5sum: 228ce0d3ee1622da16d658519222c3ba
SHA1: 19303edabc33fc0baeafe5446e14c83501e9194b
SHA256: 0bbdfceacad71e1515ff1f4373bc377c8e78134acb5382aca722e7c155ff3055
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A small databanks entries retriever
License: unknown
Vendor: Institut Pasteur

Package: gensoft-golden-3.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 519
Depends: libc6, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-golden-3.4.2_1.0_amd64.deb
Size: 188816
MD5sum: bc286afb2e1483b9dcf5d4506b638f31
SHA1: acede3b3ad488e30be0567f12f69fc80de920eaa
SHA256: 965bb01f76d256bcd45f0ea6eb46a5fafd52584a95cedff0d1d1860d87078978
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A small databanks entries retriever
License: unknown
Vendor: Institut Pasteur

Package: gensoft-googletest-1.10.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3088
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-googletest-1.10.0_1.0_amd64.deb
Size: 705658
MD5sum: e01b4f5e2626b1e7dc1e16497c906b3e
SHA1: 16ea85adf4e0c80a2cf49c24f787902e1fa485bc
SHA256: 55f52c199f414ac64bf36dbaedb6cd195cdc2c0ec09f304399940002beb3db8b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gotree-0.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14332
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gotree-0.3.1_1.0_amd64.deb
Size: 4892436
MD5sum: 5615d636e8c944e3cca99c87fd4d5254
SHA1: 39760c1d9b249259cbf3b4a1db3e171cdb1344fd
SHA256: d1a49e387bc7340bb5e226a10ff21d346eca507dbf514e4fb73eadf270a6a168
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GoTree is a set of command line tools to manipulate phylogenetic trees. It is implemented in Go language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gotree-0.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13565
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gotree-0.4.2_1.0_amd64.deb
Size: 7051376
MD5sum: a4a65944c2f947179d44a9660da035a2
SHA1: 9b8347a7d55bf0c5a0af4aed1a4ebd6ec408551b
SHA256: 059e008073f0ee4c33040d9a33c6b4ad375b2a65c794e2d46868fa5b4182d615
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GoTree is a set of command line tools to manipulate phylogenetic trees. It is implemented in Go language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gotree-0.4.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 14215
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gotree-0.4.4_1.0_amd64.deb
Size: 7850294
MD5sum: 750573d57de217d29b2759ee506e3885
SHA1: 23427769a154deac91812e14dce967564f600b2c
SHA256: 2d45a9d3e811f94d7ffaa64610f17703b65d612d5c173ba1ce7917520b76c39c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GoTree is a set of command line tools to manipulate phylogenetic trees. It is implemented in Go language
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gperf-3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 658
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gperf-3.1_1.0_amd64.deb
Size: 237274
MD5sum: 09eb3124de231f4a19cd449414bef7ba
SHA1: 54e880a9da703591954a0af2680552888fd39d97
SHA256: 873b275af087bfa0754834faddebaf98456a1a7f38b5c9d400cedb141ce1c0a4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GNU gperf is a perfect hash function generator. For a given list of strings, it produces a hash function and hash table, in form of C or C++ code, for looking up a value depending on the input string. The hash function is perfect, which means that the hash table has no collisions, and the hash table lookup needs a single string comparison only.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gperftools-2.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 53193
Depends: libc6, gensoft-libunwind-1.3.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gperftools-2.7_1.0_amd64.deb
Size: 13906946
MD5sum: dd89ff9555293301706afbdae91cb257
SHA1: b235ca1dcfeac7604cf461b27e73a41ba69eba55
SHA256: a94d615b8cfefc1f64b1f161ca1d97b8a8048d677eb15c485d4e05e281285858
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: These tools are for use by developers so that they can create more robust applications. Especially of use to those developing multi-threaded applications in C++ with templates. Includes TCMalloc, heap-checker, heap-profiler and cpu-profiler.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graalvm-ce-java11-20.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1119554
Depends: libc6, zlib1g, libgcc1, gensoft-xorg-libs-1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graalvm-ce-java11-20.0.0_1.0_amd64.deb
Size: 505047210
MD5sum: f29e06d09651e87db8cc2856be4bcee5
SHA1: 9805ca8f8863272c22a15c1ef011e7d0932a561f
SHA256: 4996beff0706cccdfd5628dc196eda3c040e551c4e03b7e9eeabf71f8243800e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GraalVM is a universal virtual machine for running applications written in JavaScript, Python, Ruby, R, JVM-based languages like Java, Scala, Kotlin, and LLVM-based languages such as C and C++.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graalvm-ce-java11-22.3.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 563606
Depends: libgcc1, zlib1g, libc6, gensoft-xorg-libs-1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graalvm-ce-java11-22.3.1_1.0_amd64.deb
Size: 289481826
MD5sum: a49138676951562271c27bedfc69aea2
SHA1: 2899b1b5c413eafff683c13cf69ef6287abb01c7
SHA256: 85d0e4f31988a34864c97d633de30b332b5b4f1caf16adb3726557633bcbc821
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GraalVM is a universal virtual machine for running applications written in JavaScript, Python, Ruby, R, JVM-based languages like Java, Scala, Kotlin, and LLVM-based languages such as C and C++.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graalvm-ce-java17-22.3.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 583970
Depends: libc6, zlib1g, gensoft-xorg-libs-1.1, libgcc1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graalvm-ce-java17-22.3.1_1.0_amd64.deb
Size: 297768930
MD5sum: baabbb118775095f1e66d83b421a847e
SHA1: 07ef5439f6011da54d603c084b8d40b83e61b741
SHA256: 577ccab37bdff9c36c713d7e3257fd5b5d7824f0b74447b3c615d2eea6e58e3e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GraalVM is a universal virtual machine for running applications written in JavaScript, Python, Ruby, R, JVM-based languages like Java, Scala, Kotlin, and LLVM-based languages such as C and C++.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graalvm-ce-java19-22.3.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 599997
Depends: gensoft-xorg-libs-1.1, zlib1g, libgcc1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graalvm-ce-java19-22.3.1_1.0_amd64.deb
Size: 306303354
MD5sum: f13f8c9f538237b008deb2737e579cc2
SHA1: 35ad3749a6b45901d0a98007e6de20e35000db50
SHA256: c9857c5d6719f00cba7ad7a17e42e6801c726359e76470e488becb755af8d25d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GraalVM is a universal virtual machine for running applications written in JavaScript, Python, Ruby, R, JVM-based languages like Java, Scala, Kotlin, and LLVM-based languages such as C and C++.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graalvm-ce-java8-20.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 923417
Depends: libc6, libgcc1, zlib1g, gensoft-xorg-libs-1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graalvm-ce-java8-20.0.0_1.0_amd64.deb
Size: 349700614
MD5sum: 239852c76075f9ad8a5d6b4cdb8c7a37
SHA1: 995b9e9747ef1145c3a608ee7498e79841f37d55
SHA256: 3c2cbc9add0325b47e1dc80e738bddde951b2eb5926ecefb661d5dbefad128cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GraalVM is a universal virtual machine for running applications written in JavaScript, Python, Ruby, R, JVM-based languages like Java, Scala, Kotlin, and LLVM-based languages such as C and C++.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gradle-7.3.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 188849
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-java-1.8.0, gensoft-java-1.7.0, gensoft-java-13.0.2, gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gradle-7.3.1_1.0_amd64.deb
Size: 137315488
MD5sum: c57e31277478cbefc7fe3b9bf8be03a1
SHA1: 816402708e807a287ef744c542ba1e05cb3813af
SHA256: 8e45587ec6857147599413884068b477d62d6451892946a90db2a7b7fb559447
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Gradle is an open-source build automation tool focused on flexibility and performance.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-grapetree-1.5.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 237834
Depends: libgcc-s1, gensoft-adm-python-3.8.1, libc6, libstdc++6, gensoft-fastme-2.1.6.3, zlib1g, gensoft-rapidnj-2.3.2, libgomp1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-grapetree-1.5.0_1.0_amd64.deb
Size: 75796692
MD5sum: 5e093c104bb69cff0403f4c758acc63d
SHA1: d5df89b607906cb463723415ba7c83cfccac62c0
SHA256: 79109fcbe7e893606a78811b13d4276f5e21c8b8e0698b446203dcf9625c128c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a fully interactive, tree visualization program, which supports facile manipulations of both tree layout and metadata
License: unknown
Vendor: Institut Pasteur

Package: gensoft-grapetree-2.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 294379
Depends: libstdc++6, gensoft-rapidnj-2.3.2, libgcc-s1, gensoft-adm-python-3.8.1, gensoft-graalvm-ce-java11-20.0.0, zlib1g, gensoft-fastme-2.1.6.3, libc6, libgomp1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-grapetree-2.1_1.0_amd64.deb
Size: 93868534
MD5sum: 9f32c2e0b31d9bc906b75ae4cc50fd52
SHA1: 9f691e101c0d06212ed8dbd5e213ffcf76d7d2b1
SHA256: e9c81efd2683e5322ac700e173157acaf7e7ce011b44e53571390ebbebee2173
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a fully interactive, tree visualization program, which supports facile manipulations of both tree layout and metadata
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graph-coverage-0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 113402
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graph-coverage-0.2_1.0_amd64.deb
Size: 37318506
MD5sum: 3bb1cb55ee874c891521ff728782753d
SHA1: e4e962fcae5535ad4240fba5643e700f28ebfb54
SHA256: 769cac3833aa29087e6a7821456b4724e7015229b96e507dbaaa6f2ea4c541a8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tool to generate graphical coverage representation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graphaligner-1.0.16
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 29769
Depends: gensoft-gcc-9.2.0, gensoft-boost-1.72.0, gensoft-sdsl-lite-2.1.1, libc6, zlib1g, gensoft-jemalloc-5.2.1, gensoft-protobuf-3.11.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graphaligner-1.0.16_1.0_amd64.deb
Size: 8222884
MD5sum: da6056531183888d26e8cda33deb3fdb
SHA1: 06391cfc591842c6332066f4a369b9f6df36c8d0
SHA256: 622812de4501d9ae8753f39f253472074c5881e84b165deac3e68acf5b1b2735
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Seed-and-extend program for aligning long error-prone reads to genome graphs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graphchainer-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1656
Depends: gensoft-sdsl-lite-2.1.1, gensoft-protobuf-3.11.3, gensoft-boost-1.72.0, zlib1g, libc6, gensoft-gcc-9.2.0, gensoft-jemalloc-5.2.1, gensoft-mummer-4.0.0rc1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graphchainer-1.0.0_1.0_amd64.deb
Size: 612350
MD5sum: bac98945f88bed523017e88df820788e
SHA1: 2fe6f65cb9e08267fb5dcb58091d1dc3b4407992
SHA256: a1ff6ca8f2f33407bd0bb02512c81cbb938dc3148875c7eb1cce4cfa05dc24f0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An accurate aligner of long reads to a variation graph, based on co-linear chaining
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graphlan-1.1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 130250
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graphlan-1.1.3_1.0_amd64.deb
Size: 41297298
MD5sum: 98c9fd4b15b5ccb7683873449ef6365e
SHA1: 105967bdbf3f1d83bce20645fbe6eda544c218c5
SHA256: 7b5e3b79bca034cbf86d5fc98a996630b3dd507cf3c9e7456c4c42cb53390722
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees. It focuses on concise, integrative, informative, and publication-ready representations of phylogenetically- and taxonomically-driven investigation.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-graphviz-2.42.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 31379
Depends: gensoft-qt-5.12.1, gensoft-xz-5.2.4, gensoft-libuuid-1.0.3, gensoft-gdk-pixbuf-2.36.12, libpcre3, gensoft-pcre2-10.34, libselinux1, gensoft-fontconfig-2.13.91, gensoft-pixman-0.38.4, zlib1g, gensoft-atk-2.9.4, gensoft-libgd-gd-2.2.5, gensoft-libjpeg-turbo-2.0.4, gensoft-freetype-2.10.1, gensoft-libtiff-4.1.0, gensoft-ghostscript-9.50, gensoft-pango-1.42.4, gensoft-xorg-libs-1.1, gensoft-cairo-1.16.0, gensoft-gtk+-2.24.32, gensoft-gcc-9.2.0, gensoft-glib-2.58.3, libc6, gensoft-libpng-1.6.37, gensoft-harfbuzz-2.6.4, libbz2-1.0, gensoft-libffi-3.3, gensoft-icu-65.1, gensoft-expat-2.2.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-graphviz-2.42.3_1.0_amd64.deb
Size: 14997082
MD5sum: 92090a16f00fd3beeb980dc3d60b3d39
SHA1: 3b1ee8b4f6930c0c0fde76e702db384c982001f7
SHA256: af2eb1c4bf999e52ef7d608a16c82a37415f006246e50c8db621eed13fe0b4c2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Graphviz is open source graph visualization software. Graph visualization is a way of representing structural information as diagrams of abstract graphs and networks.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-grm-maf-ld-20180708
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 80
Depends: gensoft-gcc-9.2.0, gensoft-gsl-2.6, zlib1g, libc6, gensoft-mkl-2020.4.304
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-grm-maf-ld-20180708_1.0_amd64.deb
Size: 31172
MD5sum: 242e29b44314d6d4c834c0129898bc13
SHA1: e5c0b0b35883b7dcf14b8e66dc2df242f324864f
SHA256: ce4a6f0332ff905373468d901b9cfdd4ec7a09f4a66e73d56c594083fd75c728
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tool to help estimating how the sizes of SNP effects on a given polygenic human trait or disease depend on their minor allele frequency (MAF) in the population and their level of linkage disequilibrium (LD).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gromacs-2020
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 28898
Depends: zlib1g, libc6, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5, gensoft-adm-perl-5.30.1, gensoft-xorg-libs-1.1, gensoft-blas-3.8.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gromacs-2020_1.0_amd64.deb
Size: 11936064
MD5sum: 7b53f4538de745c3b61654334a7c0353
SHA1: 16bf3dc5da1ab3533fd78fbd62ea3375a26e766e
SHA256: 7079aa9680e964f264b721cdc2a449d9e342a09e9f74bc80fa24d5264d248594
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gromacs is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gromacs-2020.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 84161
Depends: gensoft-gcc-9.2.0, gensoft-xorg-libs-1.1, zlib1g, gensoft-blas-3.8.0, gensoft-openmpi-4.0.5, gensoft-adm-perl-5.30.1, libc6, gensoft-cuda-11.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gromacs-2020.4_1.0_amd64.deb
Size: 36918948
MD5sum: 4dd18c27d1b9dbf7708fe76a67fdc1fe
SHA1: d64bac21f456b1bbf0ab3426183458194aa9bec7
SHA256: d19b5d9d80ad21f83a94726d7f31a6461be9441ac20a89c90f22674edd1d3602
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gromacs is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-groopm-0.3.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 248830
Depends: gensoft-bamm-1.7.3, zlib1g, gensoft-adm-python-2.7.17, libc6, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-groopm-0.3.5_1.0_amd64.deb
Size: 77823950
MD5sum: ab06258ac1819eceb33ea42988b9c1fd
SHA1: 9afe7c146c01d8829bb17e22477a509271032756
SHA256: 93be6de278b65cf8e5bc23bbc7f51f5afe376a6c92df2de091b55eec96135597
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GroopM is a metagenomic binning toolset. It leverages spatio-temoral dynamics (differential coverage) to accurately (and almost automatically) extract population genomes from multi-sample metagenomic datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-growthpred-v1.07
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5410
Depends: libc6, gensoft-blast-2.2.26, gensoft-emboss-6.6.0, gensoft-clustalw-2.1, gensoft-primer3-2.4.0, gensoft-r-3.6.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-growthpred-v1.07_1.0_amd64.deb
Size: 1895160
MD5sum: 754fd94f66c8d1af3a13b149d42291d6
SHA1: bd730d354dc71eef3bf033fdb448ab7d11204838
SHA256: 29f969ccbd73f05dbac5d73cccfc82373efa350011bfb4cbf291f4b006720b0f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Sequence-based Prediction of Minimum Generation Times for Bacteria and Archaea
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gruppi-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 38
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gruppi-1.0_1.0_amd64.deb
Size: 13934
MD5sum: 34cd793bd60c1e553b867e872357808f
SHA1: 90354a79cd5afff7aca15bae88a52dcb0d40b1bd
SHA256: 30e76d0a94ec83a59141792b60d15c5a0df6c2fdddaa1b3a3e5ec56ba04d7838
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Clusters of binding sites
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gsl-1.16
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 37960
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gsl-1.16_1.0_amd64.deb
Size: 9766182
MD5sum: 8e8d3f8b7c05108b19230fb492ad0d46
SHA1: d8d7fdc8c2e4c8e29b6783207d3d311ab3e761a3
SHA256: c780bd2906d91d22a9749fa0de8282e63d21515dcd42baed2f4e5a6cc8b0296a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a numerical library for C and C++ programmers, that provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting. There are over 1000 functions in total with an extensive test suite.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gsl-2.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 45019
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gsl-2.5_1.0_amd64.deb
Size: 11637564
MD5sum: 7ae2c27fa37c46fce2b7e2c5e9901f26
SHA1: 7e2df43ee17356cf907cbabc91cfc18be8794f2b
SHA256: 53f3965137d65b2d11531dd4bb714ef5fcc02cb8a9e838d8264929ce8eb99503
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a numerical library for C and C++ programmers, that provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting. There are over 1000 functions in total with an extensive test suite.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gsl-2.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 49063
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gsl-2.6_1.0_amd64.deb
Size: 12549310
MD5sum: 98da71ca08d09cd70127aeee43eabed8
SHA1: 80a3c03aabcd3dc947d5aae3d75663fb1bf87e48
SHA256: 8920356d103e943f56e919e4ecf89850d3cb8217f2a6a89acd26b8bbd9d4c35b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a numerical library for C and C++ programmers, that provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting. There are over 1000 functions in total with an extensive test suite.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gtdbtk-1.3.0
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 424883
Depends: gensoft-prodigal-2.6.3.pp1, gensoft-hmmer-3.3, gensoft-mash-2.2, gensoft-fastani-1.3, gensoft-adm-python-3.8.1, gensoft-pplacer-v1.1-alpha19, gensoft-fasttree-2.1.11
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gtdbtk-1.3.0_2.0_amd64.deb
Size: 131503594
MD5sum: ec91c8cb75af9de3b1f8707ae35be91c
SHA1: 10fabe006cd607ffdb1e2884d389d9a4a923908b
SHA256: 84f4d5ab03bfa734dd5399fa20d50212e71066afa9d61b66a5006cb1e5b29d25
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes based on the Genome Database Taxonomy GTDB.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gtdbtk-1.5.0
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 379705
Depends: gensoft-pplacer-v1.1-alpha19, gensoft-fasttree-2.1.11, gensoft-prodigal-2.6.3.pp1, gensoft-hmmer-3.3, gensoft-mash-2.2, gensoft-fastani-1.33, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gtdbtk-1.5.0_2.0_amd64.deb
Size: 120501246
MD5sum: d1c21c585a5f902abbac7ca6762adb34
SHA1: 428a1e204cece28a01fa55972a61245aabcc033d
SHA256: 6f255fa4093ed76b07be2d01ff268d55ab0ba222ca3503adb846e86f3c7b9859
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes based on the Genome Database Taxonomy GTDB.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gtdbtk-2.1.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 379796
Depends: libgcc-s1, gensoft-pplacer-v1.1-alpha19, gensoft-prodigal-2.6.3.pp1, gensoft-mash-2.2, libc6, zlib1g, gensoft-hmmer-3.3, gensoft-adm-python-3.8.1, gensoft-fastani-1.33, gensoft-fasttree-2.1.11, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gtdbtk-2.1.1_2.0_amd64.deb
Size: 120524660
MD5sum: 0acbc2602163a3b00a011b4082e5c101
SHA1: 3397f7af95dfaf7ac1d5a3c74af308eb3f41e4f6
SHA256: def319ddcae00f8339bb6bec389930c145285b68bfad3af8b5f2bd9465756d3a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes based on the Genome Database Taxonomy GTDB.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gtk+-2.24.32
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 52199
Depends: gensoft-harfbuzz-2.6.4, gensoft-expat-2.2.9, gensoft-glib-2.58.3, gensoft-atk-2.9.4, gensoft-adm-python-2.7.17, gensoft-libffi-3.3, libbz2-1.0, gensoft-gdk-pixbuf-2.36.12, libselinux1, libc6, gensoft-pango-1.42.4, gensoft-fontconfig-2.13.91, libpcre3, zlib1g, gensoft-pixman-0.38.4, gensoft-libpng-1.6.37, gensoft-cairo-1.16.0, gensoft-xorg-libs-1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gtk+-2.24.32_1.0_amd64.deb
Size: 14824116
MD5sum: e38655043d1ff742848d9f466e6152fa
SHA1: f0c30034ab96aff578ea2ff35993e497410b6c5e
SHA256: 914411cafaa6e5bc482c1279dc7e904ff44638046327c90ea72758353f4f2b2b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GTK+, or the GIMP Toolkit, is a multi-platform toolkit for creating graphical user interfaces. Offering a complete set of widgets, GTK+ is suitable for projects ranging from small one-off tools to complete application suites.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gtk+-3.24.25
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 62264
Depends: gensoft-libffi-3.2.1, gensoft-libpng-1.6.37, gensoft-gdk-pixbuf-2.42.2, libpcre2-8-0, gensoft-libffi-3.3, gensoft-xorg-libs-1.1, gensoft-harfbuzz-2.6.7, gensoft-fontconfig-2.13.91, libcom-err2, gensoft-glib-2.66.7, gensoft-expat-2.2.9, gensoft-cairo-1.17.4, gensoft-nettle-3.5.1, libgssapi-krb5-2, gensoft-atk-2.36.0, gensoft-pixman-0.38.4, gensoft-gmp-6.2.0, libkrb5support0, libblkid1, gensoft-gnutls-3.6.11, gensoft-wayland-protocols-1.20, zlib1g, gensoft-at-spi2-core-2.39.1, gensoft-gcc-9.2.0, gensoft-pcre-8.43, gensoft-at-spi2-atk-2.38.0, gensoft-dbus-1.13.12, gensoft-pcre2-10.34, libbz2-1.0, gensoft-libiconv-1.16, libkeyutils1, libk5crypto3, gensoft-libxkbcommon-0.8.4, gensoft-cups-2.3.1, libcrypt1, libfribidi0, gensoft-pango-1.48.2, libc6, gensoft-freetype-2.10.1, libkrb5-3, libmount1, gensoft-libepoxy-1.5.5, gensoft-wayland-1.19.0, libselinux1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gtk+-3.24.25_1.0_amd64.deb
Size: 19361942
MD5sum: 256cd07df050612e4e685e2258e1015d
SHA1: f249df3d530b3d60ff4f10daa9ecf13dc6b47c3b
SHA256: b213d1c0f3451839a327df0d303a3426d55e0e7e0b8795a3c5a0f582f13360e2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GTK+, or the GIMP Toolkit, is a multi-platform toolkit for creating graphical user interfaces. Offering a complete set of widgets, GTK+ is suitable for projects ranging from small one-off tools to complete application suites.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gubbins-2.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 73596
Depends: zlib1g, gensoft-raxml-8.2.12, gensoft-iq-tree-1.6.12, gensoft-fasttree-2.1.11, gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gubbins-2.4.1_1.0_amd64.deb
Size: 21418032
MD5sum: 0d697d42e5110f35e71739820169202e
SHA1: 0acccc8c44f10d31405840f24661aa258e829d57
SHA256: cd3b5274f43b4732536d9029ac5c4887af65e2bb3d892d74c0225a8d4218eb9c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gubbins (Genealogies Unbiased By recomBinations In Nucleotide Sequences) is an algorithm that iteratively identifies loci containing elevated densities of base substitutions while concurrently constructing a phylogeny based on the putative point mutations outside of these regions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gubbins-3.2.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 341145
Depends: gensoft-rapidnj-2.3.2, libgomp, libstdc++, gensoft-raxml-ng-1.0.1, zlib, gensoft-adm-python-3.8.1, gensoft-fasttree-2.1.11, libgcc, gensoft-iq-tree-1.6.12, glibc, gensoft-raxml-8.2.12
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gubbins-3.2.0_1.0_amd64.deb
Size: 109744978
MD5sum: 7928043883c7d56b4acef81a11f86c5f
SHA1: 10d6953eafc9b765f64f3e4555e3e6f926161fa7
SHA256: fb996e799fbae82c1dc1ce20d19a344d97654ece925548e32b68bf4f43177adb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gubbins (Genealogies Unbiased By recomBinations In Nucleotide Sequences) is an algorithm that iteratively identifies loci containing elevated densities of base substitutions while concurrently constructing a phylogeny based on the putative point mutations outside of these regions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gushr-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 3870
Depends: gensoft-augustus-3.4.0, libc6, gensoft-adm-python-3.8.1, gensoft-graalvm-ce-java8-20.0.0, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gushr-1.0.0_1.0_amd64.deb
Size: 3680614
MD5sum: a8c247ca5c381a1073668317220369a0
SHA1: 9a5aed5074c871772c012bced69e9842b2df4382
SHA256: 65971b6d532b10c3dcec9c99a7d2da4ecc059b739fad0feb9ab1a59914eab40f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assembly-free construction of UTRs from short read RNA-Seq data on the basis of coding sequence annotation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gutsmash-1555cd7
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 589946
Depends: gensoft-diamond-0.9.30, zlib1g, libc6, gensoft-glimmerhmm-3.0.4, libstdc++6, gensoft-prodigal-2.6.3.pp1, gensoft-adm-python-3.8.1, libgcc-s1, gensoft-hmmer-3.3.2, gensoft-muscle-5.1, gensoft-blast+-2.13.0, gensoft-fasttree-2.1.11
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gutsmash-1555cd7_1.0_amd64.deb
Size: 180129410
MD5sum: c91d501a57ac54f66c04f7e296969898
SHA1: 31c1942402e15ff2ab95dc821c86b827fa4cd52e
SHA256: c573f744badbd5cd79833973133c825b0780b45b4be04593e2ccb6e19f7ccc36
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A new approach to functionally profile the human microbiome for specialized primary metabolic gene clusters
License: unknown
Vendor: Institut Pasteur

Package: gensoft-gzstream-1.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 42
Depends: gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-gzstream-1.5_1.0_amd64.deb
Size: 12142
MD5sum: 13a576310052c0c52538a72f2e7e66a4
SHA1: 8cfd05bfe35246739ce0b8306f3f3856d034a9e4
SHA256: e438c876bfd2bc7d40179d6f0253f624f434c457a60c94993569e4fffdd71929
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Gzstream is a small C++ library, basically just a wrapper, that provides the functionality of the zlib C-library in a C++ iostream.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hal-v2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1019214
Depends: gensoft-gcc-9.2.0, libstdc++6, zlib1g, libgcc-s1, gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hal-v2.1_1.0_amd64.deb
Size: 288645304
MD5sum: 309f5edf7f8d7ada65abea2059b5740e
SHA1: 3e9fc52a395c302680772bd41e5144f0b92284d6
SHA256: 59f13f0463dd64c83add7750f738a02f49d1e16ff22bf7e7cbfd359b6e804e61
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Hierarchical Alignment (HAL) Format API (v2.1). HAL is a structure to efficiently store and index multiple genome alignments and ancestral reconstructions. HAL is a graph-based representation which provides several advantages over matrix/block-based formats such as MAF, such as improved scalability and the ability to perform queries with respect to an arbitrary reference or subtree.  This package includes the HAL API and several analysis and conversion tools
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hal-v2.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1738211
Depends: gensoft-gcc-9.2.0, libc6, gensoft-adm-python-2.7.17, libstdc++6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hal-v2.2_1.0_amd64.deb
Size: 482996742
MD5sum: 3a9b9209ef3d0db68ed5b2f1db17c419
SHA1: 8e3faa2d98860b6eb681c1df7381c5a91f271311
SHA256: 080ade86f7f603f0f84ffab13f71ef23cceb7945c70a7daeca6cbd80620603e9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Hierarchical Alignment (HAL) Format API (v2.1). HAL is a structure to efficiently store and index multiple genome alignments and ancestral reconstructions. HAL is a graph-based representation which provides several advantages over matrix/block-based formats such as MAF, such as improved scalability and the ability to perform queries with respect to an arbitrary reference or subtree.  This package includes the HAL API and several analysis and conversion tools
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hal2vg-1.0.16
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 139617
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hal2vg-1.0.16_1.0_amd64.deb
Size: 38477274
MD5sum: d02be4976b3a9b1016ad5f0605ab58ad
SHA1: 61b7e7d02d6f262d11cdcc017e14949f51e2cf90
SHA256: bf6733cfc06ee31c1a60290f51dc968123004991478e666af6e172579a1a7e18
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hal2vg-1.0.17
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 140849
Depends: gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hal2vg-1.0.17_1.0_amd64.deb
Size: 38781584
MD5sum: ec1b689b8b4a259393b7b50f3ae986a0
SHA1: cc6594beee4cf3ecbbb2bc906ff4dd41788484f7
SHA256: c28b37671b5c2bf89a8e689adfa5344c9943f83a58bd50c9dbdccadb4b7ea62a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hapbin-1.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13030
Depends: gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hapbin-1.3.0_1.0_amd64.deb
Size: 3275476
MD5sum: c40a6cad41abc6feecc2e5b92c27c04e
SHA1: 93f10029cae2440dbef3120e5e6cde83ce3e8e88
SHA256: c0a1fba4c11b0eeaf8640e7fb37280841a04f0be7f885a8ab2e01a2f51f10640
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: hapbin is a collection of tools for efficiently calculating Extended Haplotype Homozygosity (EHH), the Integrated Haplotype Score (iHS) and the Cross Population Extended Haplotype Homozogysity (XP-EHH) statistic.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-harfbuzz-2.6.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 52577
Depends: gensoft-cairo-1.16.0, zlib1g, gensoft-expat-2.2.9, gensoft-glib-2.58.3, gensoft-gcc-9.2.0, gensoft-xorg-libs-1.1, gensoft-fontconfig-2.13.91, gensoft-freetype-2.10.1, gensoft-libpng-1.6.37, libc6, gensoft-pixman-0.38.4, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-harfbuzz-2.6.4_1.0_amd64.deb
Size: 15921452
MD5sum: 74fd342871505052d2ab87ed84ccc64a
SHA1: 896553d32d6d3d6daf3a92edf0a069bcf365b65c
SHA256: 8495e79f4a160c6981b6cde190b8fb6b7d63897a0d1e4e98fe61b596afbfb217
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-harfbuzz-2.6.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 36613
Depends: gensoft-libpng-1.6.37, gensoft-libiconv-1.16, gensoft-pcre-8.43, gensoft-icu-65.1, gensoft-expat-2.2.9, gensoft-gcc-9.2.0, zlib1g, gensoft-pixman-0.38.4, gensoft-xorg-libs-1.1, gensoft-fontconfig-2.13.91, gensoft-freetype-2.10.1, libc6, gensoft-cairo-1.17.4, gensoft-glib-2.66.7, libbz2-1.0, gensoft-libffi-3.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-harfbuzz-2.6.7_1.0_amd64.deb
Size: 11232618
MD5sum: 0cab7b6e75edf8177d2e0a6511a6ea5a
SHA1: 4d6014d8ed2b1aea1d8e82320e6d318fb29cf4af
SHA256: f4186d28858a4dd7bb85266f83cf3fe9790009fda4413527fab95a00d9d99b58
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-harvest-tools-1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 32475
Depends: gensoft-gcc-9.2.0, libc6, gensoft-zlib-1.2.11
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-harvest-tools-1.3_1.0_amd64.deb
Size: 8470846
MD5sum: 5bcbe2ed5a7c62d537dfbaad59317cb2
SHA1: 1ad9e57adb86a1db7340fc341d58e2c06274f319
SHA256: 3b86f0ec64c1226d1671105656c9dc3ec1d2ea14ba6ba6eff4c4e1723df5f5a3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: HarvestTools is a utility for creating and interfacing with Gingr files, which are efficient archives that the Harvest Suite uses to store reference-compressed multi-alignments, phylogenetic trees, filtered variants and annotations. Though designed for use with Parsnp and Gingr, HarvestTools can also be used for generic conversion between standard bioinformatics file formats.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hclust2-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 238958
Depends: libgcc-s1, gensoft-adm-python-3.8.1, libstdc++6, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hclust2-1.0.0_1.0_amd64.deb
Size: 83022802
MD5sum: f6e5a39fb4a0fb49437c683af17abecd
SHA1: 0c1b24c2d9362756a0c1997eec45c66ffdf14d41
SHA256: e970eb46955f5815f70b492f2467867588e9a9e72ed5b03758071b4ad5fe63b3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publication.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hdf5-1.10.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20190
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hdf5-1.10.6_1.0_amd64.deb
Size: 6715724
MD5sum: 93c8bb780f13a1b8e32f498f44c42158
SHA1: d299a958e630c26189a18df680ee665b0c7b3755
SHA256: a7aed82293f8e3e9d81db07ca9d499c8bd0ac5c97691ecf2539f0ecca309b570
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data. HDF5 is portable and is extensible, allowing applications to evolve in their use of HDF5. The HDF5 Technology suite includes tools and applications for managing, manipulating, viewing, and analyzing data in the HDF5 format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hdf5-1.8.18
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 15109
Depends: gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hdf5-1.8.18_1.0_amd64.deb
Size: 4197898
MD5sum: 24815bce4bef24eaf0459e12487752bd
SHA1: 02b53703f912b5d2f595213101b990c359fa5404
SHA256: 2aaafa264172e31d55ccd1e04b602553feda51fccfd59d6e3f2d595b1411a30b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data. HDF5 is portable and is extensible, allowing applications to evolve in their use of HDF5. The HDF5 Technology suite includes tools and applications for managing, manipulating, viewing, and analyzing data in the HDF5 format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-help2man-1.47.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 42
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-help2man-1.47.12_1.0_amd64.deb
Size: 16612
MD5sum: 0139a28062a7e5e1e90917f33646bbd9
SHA1: 57bf35d39e402896951f86537da4c81961e97f69
SHA256: b05426d12dc8bcc154bc086975fffc265f01bfe6525ae14f50f0b07dc679616d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hhsuite-3.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 129834
Depends: gensoft-psipred-4.02, gensoft-blast-2.2.26, gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, gensoft-dssp-2.2.1, gensoft-adm-python-3.8.1, libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hhsuite-3.2.0_1.0_amd64.deb
Size: 49295248
MD5sum: 578b0e0c6559440a815c571e2e58ab0e
SHA1: 52b43512ada53a0c6d11d58aa5ec448b44a22416
SHA256: 7c99d9aa11676e0f04b1b59ef78910c215dfb5b6028468a6261c96d5db6d2756
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The HH-suite is an open-source software package for sensitive protein sequence searching based on the pairwise alignment of hidden Markov models (HMMs).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hhsuite-3.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 129845
Depends: gensoft-psipred-4.02, gensoft-dssp-2.2.1, libc6, gensoft-blast-2.2.26, gensoft-gcc-9.2.0, gensoft-adm-python-3.8.1, gensoft-openmpi-4.0.5, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hhsuite-3.3.0_1.0_amd64.deb
Size: 49312326
MD5sum: 4d672af1cbe83d67f57df959a4fae34e
SHA1: c530c9e15a2283f6579efb068d3312b011cc8e42
SHA256: 7ac52d915ad6de9474f80edfefbf37c26b1b11395ae3e37815c4cfac5a7b977c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The HH-suite is an open-source software package for sensitive protein sequence searching based on the pairwise alignment of hidden Markov models (HMMs).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hic-pro-2.11.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 349854
Depends: gensoft-adm-python-2.7.17, gensoft-bowtie2-2.3.5.1, gensoft-r-3.6.2, gensoft-gcc-9.2.0, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hic-pro-2.11.1_1.0_amd64.deb
Size: 107315490
MD5sum: 21578f9c5935817dd3039b57d7ba6d17
SHA1: 562d33f1ed875ce00d0120ca8b3b2c41f8d6cdc6
SHA256: 6b4e5a3cafc3c2a92b1596337245ee4c59c35c3bb74941e1f7abe92cd4d4de44
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: HiC-Pro was designed to process Hi-C data, from raw fastq files (paired-end Illumina data) to the normalized contact maps. Since version 2.7.0, HiC-Pro can analyse data from digestion protocols as well as data from protocols that do not require restriction enzyme such as DNase Hi-C.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hicstuff-3.1.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 528415
Depends: gensoft-adm-python-3.8.1, libgcc-s1, gensoft-minimap2-2.17, libstdc++6, libc6, zlib1g, gensoft-bowtie2-2.3.5.1, gensoft-samtools-1.13
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hicstuff-3.1.2_1.0_amd64.deb
Size: 164431000
MD5sum: c62dc913eb5e7a72363842a32b37ed23
SHA1: d37be280633f40317351f89cc7806926eae7e89a
SHA256: f725650d776d25e34936a54481cd00cf93e279e702ba8d906c8acc4fd9ca3968
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A lightweight library that generates and handles Hi-C contact maps in either cooler-compatible 2Dbedgraph or instaGRAAL format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hifiasm-0.16.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 21297
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hifiasm-0.16.1_1.0_amd64.deb
Size: 12194864
MD5sum: 4fb6b2d0e88ca8a50d55ab94739f3789
SHA1: 8a710e80deb5f4229d535f76fd28070fe5baeade
SHA256: 20d39c58f99836626fa547b2d1892bf081da0dfdc88f1062441df24ca7407e5a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a fast haplotype-resolved de novo assembler for PacBio HiFi reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hifix-1.0.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 96108
Depends: gensoft-mafft-7.453, gensoft-adm-python-2.7.17, gensoft-silix-1.2.11, gensoft-gcc-9.2.0, gensoft-hmmer-3.3, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hifix-1.0.6_1.0_amd64.deb
Size: 25822152
MD5sum: b3fd0782a78f11fb7c897044fb36bec8
SHA1: c9b5b9a729fd45d661c66654a8028adc3c2e0a27
SHA256: ff21700efb4249454a580f85ff4f9cafdedf20e330634805d33bd09b9cf3dae3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The software package HiFiX implements the novel algorithm for HIgh FIdelity Clustering of Sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hisat2-2.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 64613
Depends: libc6, gensoft-adm-python-2.7.17, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hisat2-2.1.0_1.0_amd64.deb
Size: 18909448
MD5sum: dd0d5dfb289667580ba466c8fcffb7a1
SHA1: d94f8d8f6c38b02def750805cba7f3b861d93196
SHA256: 0e741848d05b6a40f51a01bfc527e7474e19ac58532e3a06a082de62f0b8bfb2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) against the general human population (as well as against a single reference genome).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hlahd-1.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3464783
Depends: libc6, gensoft-gcc-9.2.0, gensoft-bowtie2-2.3.5.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hlahd-1.3.0_1.0_amd64.deb
Size: 29927980
MD5sum: adf09eb1503bc16c315d4a7d72bee505
SHA1: d4947996f895f1e5d3f38b60a6203ec9f0dd1975
SHA256: f3c11cf706aab315e38dd221148c14f8a2bba173c86c8e82bf9f431e1948f46e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: HLA-HD (HLA typing from High-quality Dictionary) can accurately determine HLA alleles with 6-digit precision from NGS data (fastq format). RNA-Seq data can also be applied.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hmmer-2.3.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10791
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hmmer-2.3.2_1.0_amd64.deb
Size: 4249850
MD5sum: 500b56932d4290a352c3d09f252af0b5
SHA1: 73b70012a63b6db72242a283f41a5fbcc502b9a0
SHA256: 6cf8097b00e53bdd72c239ba0592c1bc28b792b02eab55f0ea8cb8d50c61477d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hmmer-3.1b1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 19132
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hmmer-3.1b1_1.0_amd64.deb
Size: 7199906
MD5sum: 6f91586e4dcb353ec9b76ad9a9487654
SHA1: fb5c0c4f95e6ab4cee4f55c18bf0f9f78a0fb36d
SHA256: f98858dd53845ae5ce1c90db55d97d12b52014514cfa066cf41e709d3c874b9d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hmmer-3.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14548
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hmmer-3.2.1_1.0_amd64.deb
Size: 6727484
MD5sum: 48aea33d6f95b335a92c1e5ee7ac83e5
SHA1: f19cb58060257956e3177062f0e7e33f98835f67
SHA256: ed6dbe00c444aa147f053a338a5925cbfa2b472bd99045b9ae9dab22704054bd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hmmer-3.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25290
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hmmer-3.3_1.0_amd64.deb
Size: 11391036
MD5sum: 315180312a0f839e3a2bba7660a11796
SHA1: 723559c81a70d5241a120caf97099ffad046340b
SHA256: f132d063ef80d77759a4202b2874e538e6ba3507e0d714041bb8ee7a34f05466
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hmmer-3.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25279
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hmmer-3.3.1_1.0_amd64.deb
Size: 11390444
MD5sum: 60944e505a1b3e760e3faec59c61190a
SHA1: 3a8b18837f2ff20380b98dbbc439bf7241e70790
SHA256: f4ea3d75721b809c3edbf1e2283c88d59ba6f5b4d9172c37cd3e34e3576f495a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hmmer-3.3.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25309
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hmmer-3.3.2_1.0_amd64.deb
Size: 11399618
MD5sum: cf939a2b8b8d1eb462fa23f0f900764f
SHA1: e84c853cfff7e7721ac03390f75e6bada7d002c7
SHA256: 36ec29bcfc4c194ace7a0951bf8af3ffaa6c76a7a2247e7e850ee9e68a62c00a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hmmtop-2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 86
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hmmtop-2.1_1.0_amd64.deb
Size: 25886
MD5sum: e6a24ca66f137e3162b91ab63013ef67
SHA1: 787ef1aa3f648347d10d6a971ca31bdc5c32beec
SHA256: 5d0960ee65b33522541687e8061d3e2d36f85867057a24f13f161f34aa864b82
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: hmmtop predicts membrane topology of integral membrane  proteins  using hidden  Markov  model.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hops-0.35
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 75049
Depends: gensoft-r-4.1.0, gensoft-java-1.8.0, gensoft-malt-0.4.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hops-0.35_1.0_amd64.deb
Size: 73794528
MD5sum: ff0707aa932570950de7185ceb2d3b20
SHA1: 8adbf5fec6025c862b4b31c578c9faa60f3d14db
SHA256: 135c486c2b3015a23bffc16f7d1d1c52cfce67e99881decdee3c66ff3af0512d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a java pipeline which focuses on screening MALT data for the presence of a user-specified list of target species
License: unknown
Vendor: Institut Pasteur

Package: gensoft-html4blast-1.7a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 737
Depends: gensoft-freetype-2.10.1, zlib1g, gensoft-libjpeg-turbo-2.0.4, gensoft-adm-perl-5.30.1, gensoft-libpng-1.6.37, gensoft-fontconfig-2.13.91, gensoft-xorg-libs-1.1, libbz2-1.0, gensoft-xz-5.2.4, libc6, gensoft-expat-2.2.9, gensoft-libtiff-4.1.0, gensoft-libgd-gd-2.2.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-html4blast-1.7a_1.0_amd64.deb
Size: 236310
MD5sum: 82278a7f98a9aafbab2ea953c6fd16d0
SHA1: 735058c4857b6f11b6f6efb9c789c62f815c2080
SHA256: 8c8b54d244a1e104ce092c1aa8f24830148915e639f630fee9522a09c7ffe96d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A simple Text to HTML blast results formatter
License: unknown
Vendor: Institut Pasteur

Package: gensoft-htqc-1.92.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 209235
Depends: gensoft-cairo-1.16.0, gensoft-xorg-libs-1.1, gensoft-freetype-2.10.1, gensoft-expat-2.2.9, gensoft-libpng-1.6.37, libc6, zlib1g, gensoft-adm-perl-5.30.1, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-fontconfig-2.13.91, gensoft-pixman-0.38.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-htqc-1.92.3_1.0_amd64.deb
Size: 49791830
MD5sum: 3c879946802d79592d46054e0870ebae
SHA1: 22c300bfd233dd894eb1e60740caa5a11fa70bc7
SHA256: 6504d3a2588e0c420f2b75fd3fe2b8aee5881220639bc9a4add17b2127b6e855
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Quality control and filtration for illumina sequencing data A toolkit including statistics tool for illumina high-throughput sequencing data, and filtration tools for sequence quality, length, tail quality, etc..
License: unknown
Vendor: Institut Pasteur

Package: gensoft-htseq-0.11.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 158127
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-htseq-0.11.2_1.0_amd64.deb
Size: 50724090
MD5sum: 444dbc2c55d5555d173cd94571d62f9a
SHA1: 799ba35b8a9502df1458673a2432a3699ed62413
SHA256: edc6b90738007d8ad79a420bca87a59e327a9052704d2b3f804560dbbe50c3c1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: high-throughput sequencing assays processing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-htslib-1.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25079
Depends: libbz2-1.0, zlib1g, gensoft-xz-5.2.4, libssl1.1, gensoft-curl-7.68.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-htslib-1.10_1.0_amd64.deb
Size: 7926486
MD5sum: 9a30b1d5b0b0fc1e9d63cc464c5d6398
SHA1: 68aa5d628f275208a2d83c6cf1de78e1b27e4368
SHA256: 616bf1f5787f3d2b2d4f9c4a4b4456becb362ce1c27f899a9e9ab9dbf38c8774
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C library for high-throughput sequencing data formats. It is designed for speed and works with both VCF and BCFv2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-htslib-1.13
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30683
Depends: zlib1g, libbz2-1.0, libssl1.1, gensoft-xz-5.2.4, gensoft-curl-7.68.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-htslib-1.13_1.0_amd64.deb
Size: 9635666
MD5sum: 50bc91b1af348f5354e9a0f2f44b8b4d
SHA1: abbbc9d6d50ffbb930ea6fd12dc46a80076a971e
SHA256: 3573b20be7dc68d9d8349f2863b60d74089f2371148dad5203290e6f8fcd3b55
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C library for high-throughput sequencing data formats. It is designed for speed and works with both VCF and BCFv2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-htslib-1.14
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 31010
Depends: zlib1g, gensoft-xz-5.2.5, gensoft-curl-7.68.0, libc6, libssl1.1, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-htslib-1.14_1.0_amd64.deb
Size: 9720986
MD5sum: a49b7c2633af98c1659e13001c1e25a3
SHA1: 09dfd428e56be847b234beefe81743721b13b2ac
SHA256: 55c8160535279c6776cf59beafc479dcd246a97d0e48ae6beb8676cb51d92d23
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C library for high-throughput sequencing data formats. It is designed for speed and works with both VCF and BCFv2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-htslib-1.16
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 36553
Depends: libssl1.1, zlib1g, gensoft-curl-7.68.0, libc6, gensoft-xz-5.2.5, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-htslib-1.16_1.0_amd64.deb
Size: 11318986
MD5sum: 289bde5a9bdc8cc2ca41c34e09ed21c4
SHA1: ccad1cb320c61e7b6d2de61682cd4c8cc1efd87e
SHA256: cb0fbe7ba657798d65169ac5299cad6c74f5ac5c384eb2b7eb361b77c43f4d47
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C library for high-throughput sequencing data formats. It is designed for speed and works with both VCF and BCFv2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-htslib-1.18
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 36749
Depends: libbz2-1.0, libssl1.1, zlib1g, gensoft-curl-7.68.0, libc6, gensoft-xz-5.2.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-htslib-1.18_1.0_amd64.deb
Size: 11434902
MD5sum: 244eb389459fe3088096efc9b948b1a4
SHA1: 29ea18b6c959e373790a3bab243c94634498cf91
SHA256: 90408e091e050c7bff00625b5c296e4f9d4fb38347bb93dcf003646e829dbb7e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C library for high-throughput sequencing data formats. It is designed for speed and works with both VCF and BCFv2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-htslib-1.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 19572
Depends: libc6, libbz2-1.0, openssl-libs, zlib1g, gensoft-curl-7.68.0, gensoft-xz-5.2.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-htslib-1.4_1.0_amd64.deb
Size: 6175296
MD5sum: 6487836478ed2e0a8e49a78575a85cde
SHA1: 0c2a2da8bbdc4459c6c44164b96e111ba06d3c80
SHA256: d3dc521510d39709a61ef7d6e25b355fb35299f66e1ba8adf603f5036254766b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C library for high-throughput sequencing data formats. It is designed for speed and works with both VCF and BCFv2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-htslib-1.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 21095
Depends: libssl1.1, libc6, zlib1g, gensoft-curl-7.68.0, gensoft-xz-5.2.4, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-htslib-1.9_1.0_amd64.deb
Size: 6634886
MD5sum: 33925e3aaedfd08927ce3e7292b888a8
SHA1: 70d72a694b95c2c5e1a239c80e91edfba6e41988
SHA256: 203ac625fdefa17e108d46fae0679146f77f1f1722b9e82918b430a699629d84
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C library for high-throughput sequencing data formats. It is designed for speed and works with both VCF and BCFv2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-hyphy-2.5.36
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Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 51390
Depends: gensoft-curl-7.68.0, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-hyphy-2.5.36_1.0_amd64.deb
Size: 16909712
MD5sum: d4339bd6951d898a7eb1670aaae11464
SHA1: 1cbac17439fed81aeb8c43500a2c80b673c48231
SHA256: 895e7d8e51b22b035967ebf88038b49c7fece01b9e35ab1c9088a65f2bd9a899
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: comparative sequence analysis using stochastic evolutionary models
License: unknown
Vendor: Institut Pasteur

Package: gensoft-icc-xe-2019
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4544406
Depends: gensoft-singularity-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-icc-xe-2019_1.0_amd64.deb
Size: 4593418362
MD5sum: 7431cbaa66344b1254c5a0cdbdb73a0b
SHA1: 923abf299dd6de6befed1b526d38c20964a1a341
SHA256: 2c7e5559bdbacc916934d439540c360dd8ba98cfd2a345399e494dc8a2fa45c5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Intel C/C++ compiler optimized to take advantage of advanced processor features like multiple cores and wider vector registers for better performance. Its a drop-in addition for C and C++ development and has broad support for current and previous C and C++ standards with full C++11 and C99 support.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-iclipro-0.1.1
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 235937
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-iclipro-0.1.1_1.0_amd64.deb
Size: 74662974
MD5sum: 0cb94481470b9e45a088500c7a476f63
SHA1: 6622508b4bc6ae6f3aaa6d0edb1ec384f1f0b967
SHA256: f8c33a829b9142a8d50b70cebe4e8ee2102c6c1f104c43c356376bd33f32f2ae
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: iCLIPro is a Python package that can be used to control for systematic misassignments in iCLIP data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-icu-65.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 39335
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-icu-65.1_1.0_amd64.deb
Size: 14886660
MD5sum: 101bcccb946931f1441368ca8d1c8542
SHA1: 0db134d5deb55ecd8ba8086b44d67fb9d4135f2f
SHA256: 70f388799eebe24117fff884643ff8e7544b890c43057e1fe56557614526d754
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ICU is a mature, widely used set of C/C++ and Java libraries providing Unicode and Globalization support for software applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-icu-70.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 41278
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-icu-70.1_1.0_amd64.deb
Size: 15657678
MD5sum: a9246e24a2b58d9682f8a3cac07b63f1
SHA1: 57fe73b37f4a8a9c87f034d2debd34678bacb648
SHA256: bd52f76edebe8d777994ddbee52a474fc204161a0fd99d44e9c6b4d9fa69e4dd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ICU is a mature, widely used set of C/C++ and Java libraries providing Unicode and Globalization support for software applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-icu-73.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 44008
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-icu-73.2_1.0_amd64.deb
Size: 16369918
MD5sum: 413f386edee12238189f728eaeee468a
SHA1: 4a0f2cb4a47f64b9d82ccd737bc5481508b3aea9
SHA256: 054a6b675017aad0ebc46cdd97f6363eea1b728e2615e3ef839f06bdfca100ef
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ICU is a mature, widely used set of C/C++ and Java libraries providing Unicode and Globalization support for software applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-idba-1.1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 159354
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-idba-1.1.3_1.0_amd64.deb
Size: 42280700
MD5sum: 07b036bf6907bd3978a2187d02e8ecc8
SHA1: 4117902b896c8c37b5e7d71eb54421ef79cd5ab9
SHA256: df3707c47666b1dae9b91f1d75d3fe32c5b7ca87539ff02d4e7b9afb86ce3bbb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: IDBA-UD is a iterative De Bruijn Graph De Novo Assembler for Short Reads Sequencing data with Highly Uneven Sequencing Depth. It is an extension of IDBA algorithm. IDBA-UD also iterates from small k to a large k.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-idr-2.0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 276591
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-idr-2.0.3_1.0_amd64.deb
Size: 85995938
MD5sum: 993588eba53c6d4aa921cf629d8ee81c
SHA1: fe30a955ab625240c8cbeb27423abd77707736d3
SHA256: 63903b4c5840c4a008a9635a14040656ff6482c04906af0b1be5016f579071b9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The IDR (Irreproducible Discovery Rate) framework is a unifed approach to measure the reproducibility of findings identifed from replicate experiments and provide highly stable thresholds based on reproducibility.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-igblast-1.15.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 96328
Depends: gensoft-gcc-9.2.0, zlib1g, libc6, gensoft-adm-perl-5.30.1, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-igblast-1.15.0_1.0_amd64.deb
Size: 34573324
MD5sum: a59308629bfa14f6295f74472b5555ba
SHA1: 166d82e9100752edbcb9e2b4b8a8a7ae89d3df1c
SHA256: 097518e91ed569cfed1b7e89d32315980aef24d5196deae736633b7d9c1a78b8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: IgBLAST was developed at NCBI to facilitate analysis of immunoglobulin variable domain sequences (IgBLAST has recently been extended to perform analysis for T cell receptor (TR) sequences)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-igblast-1.16.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 97154
Depends: zlib1g, libc6, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-igblast-1.16.0_1.0_amd64.deb
Size: 34838740
MD5sum: a7a9b9218e471fd146dd2ff1f5f406e6
SHA1: 0ec731dfdf6b0c7130554a2ff2c8286ccd97c944
SHA256: 92f6c1c99de69e33f15e26ec8377f669c8e3933cf830db01d0af879dd2254b0e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: IgBLAST was developed at NCBI to facilitate analysis of immunoglobulin variable domain sequences (IgBLAST has recently been extended to perform analysis for T cell receptor (TR) sequences)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-igblast-1.18.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 102550
Depends: libc6, libbz2-1.0, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-igblast-1.18.0_1.0_amd64.deb
Size: 37484130
MD5sum: c1b6a9bf40635489b08815bd6cbe1e09
SHA1: 25f2455bb788076b77303126dda7f139450d534e
SHA256: 0af57409f6380d401adb4be3191d9bd1eb0d37e8af5df15379f841bb3f5650b8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: IgBLAST was developed at NCBI to facilitate analysis of immunoglobulin variable domain sequences (IgBLAST has recently been extended to perform analysis for T cell receptor (TR) sequences)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-igraph-0.8.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14730
Depends: gensoft-xz-5.2.4, gensoft-libiconv-1.16, gensoft-gmp-6.2.0, gensoft-gcc-9.2.0, libc6, zlib1g, gensoft-libxml2-2.9.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-igraph-0.8.0_1.0_amd64.deb
Size: 5054612
MD5sum: f164016b1d4c4ce1735c0366cd0b88fe
SHA1: f4640503bd24f2f4b53e078ecd506b368458cc91
SHA256: 47613bdc3672b241ff62e43753b3f4358599eadccb22c4982dbd5adcdcfc4131
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a library for creating and manipulating graphs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-igv-2.11.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 85679
Depends: gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-igv-2.11.4_1.0_amd64.deb
Size: 56694394
MD5sum: 1661937d7d7783e453898532b906fc1c
SHA1: b5cff0bf8af21bac1578322ad21fba252c21ca3e
SHA256: 5aad2cc91655fb2a9022e19d5fc5a55082735bfa7ea00f802ece169521be3fca
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-igv-2.11.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 85679
Depends: gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-igv-2.11.6_1.0_amd64.deb
Size: 56691128
MD5sum: ff12870fb045e97717bbdd71003d34fe
SHA1: d96131477a06767a77e32194ff639acd30d41586
SHA256: 3972c48e3ae5f4aec5a63bfc98f38bc122173da2efc6ca60ab29eb8929eddb18
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-igv-2.11.9
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 83636
Depends: gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-igv-2.11.9_1.0_amd64.deb
Size: 54829346
MD5sum: e8cfb3eabf5ce46037af23810c7b53e1
SHA1: 82dcc543ca95a3d59d9bc0b7deab0d030ddfec2c
SHA256: 95d7372eed2aa8da172a743b00dabcc1ba8f075ba00547a8b27ed12bb56f66c3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-igv-2.8.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 81662
Depends: gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-igv-2.8.2_1.0_amd64.deb
Size: 54548524
MD5sum: 9b067dbbd6810e3db384a36c3d52e717
SHA1: c8a8315884d8a46887b89e65a32340ce2ae2f4b2
SHA256: 689ef8a1607f5a845975ade80634b78e1c3a931cd2e982038b5169f5ebba0417
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-igv-2.9.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 82700
Depends: gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-igv-2.9.0_1.0_amd64.deb
Size: 55466078
MD5sum: 081bb0f105da4e4f0f5e34a36cfee89b
SHA1: 683798cd3c7606e28d2f79e288e8a6153a96617e
SHA256: e4e3bbdc7f94e4a9ae43b99838239832d0a5ca447ee10b3f5b0ae6787825acf5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-imagemagick-6.9.10-91
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 42308
Depends: gensoft-pkg-config-0.29.2, gensoft-libpng-1.6.37, gensoft-xz-5.2.4, gensoft-libtool-2.4.6, gensoft-freetype-2.10.1, gensoft-expat-2.2.9, libc6, gensoft-libxml2-2.9.10, gensoft-libwebp-1.1.0, gensoft-openjpeg-2.3.1, gensoft-ghostscript-9.50, gensoft-graphviz-2.42.3, zlib1g, gensoft-fftw-3.3.8, gensoft-gcc-9.2.0, libbz2-1.0, gensoft-lcms2-2.9, gensoft-xorg-libs-1.1, gensoft-libiconv-1.16, gensoft-fontconfig-2.13.91, gensoft-libjpeg-turbo-2.0.4, gensoft-libtiff-4.1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-imagemagick-6.9.10-91_1.0_amd64.deb
Size: 16253396
MD5sum: 9550a67c599b852c37f4ac5842786225
SHA1: 0752ac6c603d03d5721d861b4aef2e39b7292f54
SHA256: 60921d453a82d5d2fa972642840e7166fb618c8ac927f4e34e85132bf1561abd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Use ImageMagick to create, edit, compose, or convert bitmap images. It can read and write images in a variety of formats (over 200) including PNG, JPEG, JPEG-2000, GIF, TIFF, DPX, EXR, WebP, Postscript, PDF, and SVG. Use ImageMagick to resize, flip, mirror, rotate, distort, shear and transform images, adjust image colors, apply various special effects, or draw text, lines, polygons, ellipses and Bezier curves.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-imp-2.13.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 767906
Depends: gensoft-adm-python-3.8.1, gensoft-icu-65.1, gensoft-hdf5-1.10.6, gensoft-gmp-6.2.0, libstdc++6, gensoft-protobuf-3.11.3, gensoft-openmpi-4.0.5, gensoft-ann-1.1.2, gensoft-mpfr-4.0.2, libc6, gensoft-gcc-9.2.0, gensoft-gsl-2.6, gensoft-gperftools-2.7, gensoft-zstd-1.4.4, libbz2-1.0, gensoft-xz-5.2.4, zlib1g, gensoft-fftw-3.3.8, gensoft-boost-1.72.0, gensoft-libunwind-1.3.1, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-imp-2.13.0_1.0_amd64.deb
Size: 185496416
MD5sum: 9c68bc36c5cf5a31728a19aef3fc8039
SHA1: edcb6012a4889b538602d46ae2c4b32f8c27cd9b
SHA256: 467c656241ff32cac49be91b9ce0576a950075e610b5c1464a42f68ccc0b663e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-infernal-1.1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25471
Depends: gensoft-openmpi-4.0.5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-infernal-1.1.3_1.0_amd64.deb
Size: 12401622
MD5sum: ab76bb6cdd5d776a5a932409be5cfc2c
SHA1: 5a4c9210b7e9a7d5ea8d5beb7963ce7f4d3fd360
SHA256: e62c568a9009044d4c87638d2f2e5baf8da5adf09be0f980a7cfc69d3629d250
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Inference of RNA secondary structure alignments covariance models (CMs)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-infernal-1.1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25469
Depends: gensoft-openmpi-4.0.5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-infernal-1.1.4_1.0_amd64.deb
Size: 12402470
MD5sum: 5fcd154f165dfbc7b597656729f0f5e3
SHA1: 7f222c532ebabaf5601d26b0b1263c34d4b4fba0
SHA256: ad82fcca96690aa25086895ae2a9731ba4f75cdba476984dba81e5f010671b6f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Inference of RNA secondary structure alignments covariance models (CMs)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-infernal-1.1.5
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 26066
Depends: gensoft-openmpi-4.0.5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-infernal-1.1.5_1.0_amd64.deb
Size: 12682218
MD5sum: 60b8332f9bbc4e2b5fc789beb2d6287c
SHA1: ae8e296b95581e590ec213c508afd5028c2dafed
SHA256: 698cd228949634112ff0a5d6bd6267b0cb1eb77b1cbedc0ffb1876468b2e745e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Inference of RNA secondary structure alignments covariance models (CMs)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-info2man-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 66
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-info2man-1.1_1.0_amd64.deb
Size: 23824
MD5sum: 0b55a872de01d61bd793bc66d33a6547
SHA1: ce57e9d2517750774911c596c11755439f932953
SHA256: 0d8a36e988e1191631e1f26da78751b4de7990dd08821eb7fe0f32aaff149214
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: info to man converter
License: unknown
Vendor: Institut Pasteur

Package: gensoft-integron-finder-1.5.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 197559
Depends: gensoft-prodigal-2.6.3.pp1, libstdc++6, gensoft-hmmer-3.2.1, libc6, gensoft-infernal-1.1.3, gensoft-adm-python-2.7.17, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-integron-finder-1.5.1_2.0_amd64.deb
Size: 59859426
MD5sum: 4947f21b151b448704a041898c11cb9f
SHA1: 679816e2949a4d39ab1092ff09ab91b0a16d93d4
SHA256: ef6d9bc502f281c7448a6fd9289edd955dec55c7c31c28f2de5108a82b91ec8c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Integron Finder aims at detecting integrons in DNA sequences by finding particular features of the integron the attC sites, the integrase and when possible attI site and promoters. It provides a full pipeline from a fasta file to a gene bank file with the annotation of the element and its component.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-integron-finder-2.0.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 209554
Depends: gensoft-prodigal-2.6.3.pp1, libgcc-s1, libc6, zlib1g, libstdc++, gensoft-adm-python-3.8.1, gensoft-infernal-1.1.3, gensoft-hmmer-3.2.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-integron-finder-2.0.1_2.0_amd64.deb
Size: 69912322
MD5sum: c258974973f2661d4c5126eb068a033d
SHA1: 15cb08543b846bea77c8b7f53ee9f8de29a025cc
SHA256: 4615149955c8866bf4c79365e0f9ef68c0555414456cd19140ea238786556cce
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Integron Finder aims at detecting integrons in DNA sequences by finding particular features of the integron the attC sites, the integrase and when possible attI site and promoters. It provides a full pipeline from a fasta file to a gene bank file with the annotation of the element and its component.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-integron-finder-2.0.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 212430
Depends: libgcc-s1, gensoft-adm-python-3.8.1, libstdc++, zlib1g, gensoft-infernal-1.1.3, libc6, gensoft-prodigal-2.6.3, gensoft-hmmer-3.3.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-integron-finder-2.0.2_1.0_amd64.deb
Size: 70863524
MD5sum: 0c71a7f905a5e87ac23ae788ca5a50bc
SHA1: f1a9aa3182c54b373b34defb96a70163426df471
SHA256: b87c39317ffa1fd5e3f35fe7760d237f036537cebea26d171c7ab17cfa8f95cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Integron Finder aims at detecting integrons in DNA sequences by finding particular features of the integron the attC sites, the integrase and when possible attI site and promoters. It provides a full pipeline from a fasta file to a gene bank file with the annotation of the element and its component.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-intltool-0.51.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 577
Depends: libc6, gensoft-expat-2.2.9, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-intltool-0.51.0_1.0_amd64.deb
Size: 241460
MD5sum: 19e14cb6c6514b142b939b0e0fbba865
SHA1: 6f4ae79d30ce97c84c17513cf8acc8162c694603
SHA256: d9735908e55530f1cf2b5f872489aa66e364a0067431a07d22b412bdb39b6f93
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Utility scripts for internationalizing XML
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ior-3.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 373
Depends: gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ior-3.0.1_1.0_amd64.deb
Size: 139552
MD5sum: 8bf07d72352b6c4602fc20ccf8c0bb4d
SHA1: 03e81920835e2ed9f1487361a88d98d9beab054c
SHA256: e6ff38bf7c745f10cffbc8aefbc95dfaf228241c7bfe75a4e6d7a2e4b513fd5c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: IOR is designed to measure parallel I/O performance at both the POSIX and MPI-IO level.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-iq-tree-1.6.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14220
Depends: gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-iq-tree-1.6.12_1.0_amd64.deb
Size: 5516896
MD5sum: 6fa169a24e93e2a80284b537dec1250a
SHA1: db0aa6c0dca7e80a1bbd89e329d65ceea7feedd5
SHA256: eb25a66e351523ceaf3452c9b147ad1e823ba64b653aa4d43ba2a89d1cbd9ae0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. An ultrafast bootstrap approximation to assess branch supports. Ultrafast and automatic model selection.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-iq-tree-2.0.6
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 17382
Depends: libc6, zlib1g, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-iq-tree-2.0.6_2.0_amd64.deb
Size: 6616338
MD5sum: c2a641a86d3cdaedce6f9a7e15a86102
SHA1: 7f064a51e9abcde556d2d266d6e6ddc66950a3ac
SHA256: e775a0a398bfbd14efe2b73de3faf3f42fbc30d1776d4ba02c0098ffb6d02ac9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. An ultrafast bootstrap approximation to assess branch supports. Ultrafast and automatic model selection.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-iq-tree-2.2.2.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 20488
Depends: gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-iq-tree-2.2.2.2_1.0_amd64.deb
Size: 7837510
MD5sum: 0e230834ed48c6138cb195fd836f9f44
SHA1: 0955fe2cfb5fe96c051c6b79b74ae3531f0c4d50
SHA256: 6935983a7a071899f70929dfd96ec405af4dfab498e6b8ae1b01c1f2071be6f3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. An ultrafast bootstrap approximation to assess branch supports. Ultrafast and automatic model selection.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-is-mapper-2.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 85272
Depends: gensoft-samtools-1.10, gensoft-blast+-2.10.0, gensoft-bedtools-2.29.2, gensoft-bwa-0.7.17, gensoft-samblaster-v.0.1.24, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-is-mapper-2.0.1_1.0_amd64.deb
Size: 25079374
MD5sum: abb7556346d6174edca513dd75533a08
SHA1: 9cc858f58aa225c27cee2cfdaf1e282a31166ccc
SHA256: 078bb31bbb137fd06b09ca0ce47b3746c43f0a358a159aced9b993364dcbfc58
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This program takes paired end Illumina short read sequence data, an IS query of interest and a reference genome or assembly and reports the locations of the IS query in the reference genome or the assembly.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-isescan-1.7.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 205622
Depends: gensoft-hmmer-3.3, gensoft-blast+-2.10.0, gensoft-fraggenescan-1.31, gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-isescan-1.7.1_1.0_amd64.deb
Size: 58979044
MD5sum: bcf411688d84ba47e7692d9ba28e5380
SHA1: ead45c6a14918a21552a913dd21f2811227154a4
SHA256: 0a57bc9ef9e0e062db2f855b137439eb0ad2be1638e8d71f881bf58b0dfb09b8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome
License: unknown
Vendor: Institut Pasteur

Package: gensoft-isescan-1.7.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 205607
Depends: libc6, gensoft-adm-python-3.8.1, gensoft-hmmer-3.3, gensoft-blast+-2.10.0, gensoft-fraggenescan-1.30
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-isescan-1.7.2.3_1.0_amd64.deb
Size: 58974696
MD5sum: 6d5f3e5ff5aecd3d8f94e2f93fd53785
SHA1: 1e92d5ee377858a5d9ec94a81c71d54d1ab0e2a4
SHA256: f9a13f16be336e56114185288e279c3ab205bef3fdbcb072457158ac3bf860e6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome
License: unknown
Vendor: Institut Pasteur

Package: gensoft-isonet-0.2.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2009907
Depends: gensoft-adm-python-3.8.1, libc6, gensoft-cudnn-11.1-v8.1.0.77, gensoft-cuda-11.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-isonet-0.2.1_1.0_amd64.deb
Size: 810719372
MD5sum: 454ab1574fc933a6bba8a16a5e2fdb59
SHA1: d88c9fb4f1730c72dd6d9df90ba2e91bc3098638
SHA256: f5000069396cea354f16baaa464ee4779e4ab6a4f25afdb8ce6e666ad7a13c03
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Isotropic Reconstruction of Electron Tomograms with Deep Learning
License: unknown
Vendor: Institut Pasteur

Package: gensoft-itsx-1.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 40318
Depends: gensoft-hmmer-3.3, libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-itsx-1.1.2_1.0_amd64.deb
Size: 4946830
MD5sum: ef83bc66f60231229b3af9c55b45316f
SHA1: 5c9e629e5c016ea55891192e7aa4b058488b232e
SHA256: ae7f4de19e144f74fdaccce0e386a7e08ebf369154d190a4f3d35ec32989faa2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for use in environmental sequencing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-iva-1.0.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 60695
Depends: libc6, gensoft-mummer-3.23, gensoft-samtools-0.1.19, gensoft-kmc-3.1.1, gensoft-adm-python-3.8.1, gensoft-r-3.6.2, gensoft-smalt-0.7.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-iva-1.0.9_1.0_amd64.deb
Size: 23167920
MD5sum: cbf21674185529e801cda7b8e77be34e
SHA1: afffaadadc3a5b52c63fda6abaaadadcc2ade36e
SHA256: e296abff1a3aef2b420f0c7aee26be4c22e83f6db3e2ab9be8b6b4d52ec162d0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: IVA (Iterative Virus Assembler) is a _de novo_ assembler designed to assemble virus genomes that have no repeat sequences, using Illumina read pairs sequenced from mixed populations at extremely high and variable depth.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ivar-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1951
Depends: gensoft-gcc-9.2.0, gensoft-curl-7.68.0, zlib1g, gensoft-htslib-1.10, libc6, gensoft-xz-5.2.4, libbz2-1.0, mawk, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ivar-1.0.1_1.0_amd64.deb
Size: 527534
MD5sum: 7218dd05b184a7337395863d0cc2db4c
SHA1: b40b08a74625b2b6e12ac62c02cd4a4e0e4377d2
SHA256: c3dd5b64898c4c29ae35f3081c4e9e82ebdd3e2fd2728b0988860056d0263ef8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing. Additional tools for metagenomic sequencing are actively being incorporated into iVar. While each of these functions can be accomplished using existing tools, iVar contains an intersection of functionality from multiple tools that are required to call iSNVs and consensus sequences from viral sequencing data across multiple replicates.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jags-4.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 47005
Depends: gensoft-atlas-3.10.2, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jags-4.3.0_1.0_amd64.deb
Size: 15261276
MD5sum: 20bc0e7b5121da330b816bd6ff576eb3
SHA1: fb40531d13201c3e1322c94a2235d0af984a9d4e
SHA256: 59c9f73e25a4a493a171e4a547df6b765bb15ae254af2877c6670b3c2ac630f6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: jags  is  a  program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike  BUGS.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jansson-2.14
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1964
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jansson-2.14_1.0_amd64.deb
Size: 525174
MD5sum: 61173db8dbe61fdfc58c0f19a1d28d05
SHA1: 6225c18a247cd5f061663dcf55aeb4e5d09e9e35
SHA256: a84dd0b84785bd9b89c8b80e672e871d594b407b3f21e662d11a98441a2eb75c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: C library for encoding, decoding and manipulating JSON data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jasper-2.0.23
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4272
Depends: gensoft-xorg-libs-1.1, gensoft-libjpeg-turbo-2.0.4, gensoft-gcc-9.2.0, gensoft-freeglut-3.2.1, gensoft-mesa-19.0.8, libc6, gensoft-glu-9.0.1, gensoft-libdrm-2.4.100, zlib1g, gensoft-expat-2.2.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jasper-2.0.23_1.0_amd64.deb
Size: 991816
MD5sum: 7e3c171cba4b52856f79c5651dcb23a1
SHA1: e2ca23c9bd16734e86661a417678ec91bc96148f
SHA256: 856709aa74a02e506177f3f1b51a6806657708e2d46a4c9a3db9e4e2a69b1d17
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: JasPer is a software toolkit for the handling of image data. The software provides a means for representing images, and facilitates the manipulation of image data, as well as the import/export of such data in numerous formats (e.g., JPEG-2000 JP2, JPEG, PNM, BMP, Sun Rasterfile, and PGX).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jbigkit-2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 271
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jbigkit-2.1_1.0_amd64.deb
Size: 90154
MD5sum: 39b7548e337b3788d9300671a46809b3
SHA1: 74ffe229e79c3de86c84f0b5672d8d9969cb2130
SHA256: 56d7cbc07a1f95113cf5041d5f3d65d5f1c163a340074232c04bc5710d4fac42
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: JBIG-KIT is a software implementation of the JBIG1 data compression standard (ITU-T T.82), which was designed for bi-level image data, such as scanned documents.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jellyfish-1.1.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9990
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jellyfish-1.1.12_1.0_amd64.deb
Size: 2976964
MD5sum: 1f56684fcf7367188db90a484c1783dd
SHA1: 02635b91a107fed3d2a3f3c68ca20a3e7c768d86
SHA256: 841c30a8f60ba149112b2502a6fbcca7ec2e6fa9a451275decfed8d0501c156a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fast, Parallel k-mer Counting for DNA
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jellyfish-2.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14061
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jellyfish-2.3.0_1.0_amd64.deb
Size: 3822764
MD5sum: a1555dc0f0b768cd858e75e103d7c963
SHA1: ebf9c094f521d0d6ed092bda55b9048cef74022c
SHA256: eb226b4e7a6e2eaee92ee478bf7c0b61a85b639f8e02a1587db79c270ae76cac
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fast, Parallel k-mer Counting for DNA
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jemalloc-5.2.1
Version: 2.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 59811
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jemalloc-5.2.1_2.0_amd64.deb
Size: 14123360
MD5sum: 15e9ccf7bc9e64e9a4e094d2bfa3cb55
SHA1: 345dfef05c8a8bb9680b7ab3d68dd09dec62babb
SHA256: 38274963e0a6dc3ff70d0f6bc5e8e96a625180234d15e21dbca4ecb16b284ded
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a general purpose malloc implementation that emphasizes fragmentation avoidance and scalable concurrency support
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jitterbug-b6b3f9c
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 817323
Depends: gensoft-bedtools-2.29.2, libbz2-1.0, zlib1g, gensoft-samtools-1.10, libc6, libssl1.1, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jitterbug-b6b3f9c_1.0_amd64.deb
Size: 158770074
MD5sum: 4dd272f0a831f2aeb1616de038c18e20
SHA1: 0c31fe3c46d833a38c092cf9edddedbc794cc2b0
SHA256: 79d83b3a50038f4cd044c09eecf3714e8f7a969dfa3bfa7036c0c7991f174488
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: jitterbug is a bioinformatic software that predicts insertion sites of transposable elements in a sample sequenced by short paired-end reads with respect to an assembled reference.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jmodeltest2-2.1.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5746
Depends: libc6, gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jmodeltest2-2.1.10_1.0_amd64.deb
Size: 4889800
MD5sum: 57e31d4be59b925574c9d5be6d7e8dbb
SHA1: 7c43da672db1ded46ef7b23131dba51fb4fd7be6
SHA256: c2e7a145afce9b452ee97efe47f4565ae6dd9ca9348188bacd832fb04cbf9189
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool to carry out statistical selection of best-fit models of nucleotide substitution.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-joinx-1.12.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2972
Depends: gensoft-gcc-8.4.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-joinx-1.12.0_1.0_amd64.deb
Size: 1075946
MD5sum: 70c6511fe2562e8275d76d882ee00889
SHA1: ac933d1d8ade31d627a1b18119210fe56a7112a1
SHA256: ab7050563f0a721195b619736314f6cf9376631ca899365768e58ebe39e0139d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Joinx is a lightweight tool for performing operations (e.g., intersection, difference, on genomic data contained in vcf and .bed files. It also provides some limited analysis functions (concordance reports). An important assumption that joinx makes is that the input data is always sorted. This allows it to compute its results in an efficient manner.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jsoncpp-1.9.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 364
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jsoncpp-1.9.2_1.0_amd64.deb
Size: 125170
MD5sum: 9c114cfa7efd21384ccbb6d8a0670ca5
SHA1: 193a3085afbc2ae39d70ea091ecb1cbb1299d1a8
SHA256: cb2be2895f62206b213550a64581dc493f6d3de55b6221244d02831057e9ee1c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: JsonCpp is a C++ library that allows manipulating JSON values, including serialization and deserialization to and from strings. It can also preserve existing comment in unserialization/serialization steps, making it a convenient format to store user input files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jspecies-1.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4992
Depends: gensoft-blast-2.2.26, gensoft-graalvm-ce-java8-20.0.0, gensoft-mummer-3.23
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jspecies-1.2.1_1.0_amd64.deb
Size: 4613696
MD5sum: cf4af4457ce0c66d8d5b844205f9f972
SHA1: 33db67bc0024429daf3c0efdb0081a2fd2545d8d
SHA256: 00a7e9a62b0ea3766dc475c96bffc2daf6b407d7afacd404f47c851e57df112e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: JSpecies is an easy to use, biologist-centric software designed to measure the probability if two genomes belonging to the same species or not.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-julia-0.6.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 232872
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-julia-0.6.2_1.0_amd64.deb
Size: 67955958
MD5sum: 0dcd1edd74a9d0377eb90359ad44d0e6
SHA1: 5d979d1429fcb56c3236b22e6ca86fb743d619d1
SHA256: 7a030ae4684fc397516e984968653daa393e13dbe258c0f9a36f8035cf04ee85
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: high-level, high-performance dynamic programming language for numerical computing. It provides a sophisticated compiler, distributed parallel execution, numerical accuracy, and an extensive mathematical function library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-julia-1.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 301634
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-julia-1.1.1_1.0_amd64.deb
Size: 83903560
MD5sum: 6d6ddb1d68c83cc7d42969d2cfc8dc9c
SHA1: e1a4344bf8f892a76726b71a67d6d0a5979b3bb8
SHA256: e59a8120c1af74d0b2994e78e9c49878f6a4e0eaf8592b97f193da8d2517b9f5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: high-level, high-performance dynamic programming language for numerical computing. It provides a sophisticated compiler, distributed parallel execution, numerical accuracy, and an extensive mathematical function library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-julia-1.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 332596
Depends: gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-julia-1.4.1_1.0_amd64.deb
Size: 92474556
MD5sum: af5d3b49ce8c52d582ad283f8666a9d0
SHA1: 3ff77fb44eb404c53fc0696b6c024487625a69e0
SHA256: 26b4071b15b260445725eaa0c21db7a1f4e63a40a0076f1aa2f1b41b195c1f2d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: high-level, high-performance dynamic programming language for numerical computing. It provides a sophisticated compiler, distributed parallel execution, numerical accuracy, and an extensive mathematical function library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-julia-1.5.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 372340
Depends: libgcc-s1, libstdc++6, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-julia-1.5.4_1.0_amd64.deb
Size: 105400692
MD5sum: 358127571bfc491baf24c64c950a1b49
SHA1: cd2907961c80b15f69d019d78db619b3fb674849
SHA256: 2e9a3603e5b78b6e9253cb82643adbb38263f43ef40185f9cacecb61bdd8367e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: high-level, high-performance dynamic programming language for numerical computing. It provides a sophisticated compiler, distributed parallel execution, numerical accuracy, and an extensive mathematical function library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-julia-1.6.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 384394
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-julia-1.6.1_1.0_amd64.deb
Size: 109635718
MD5sum: bcb0ffb3b117bf551e81abc80fa08b40
SHA1: 638b5548ba1982f1fc2ad0571b3bc8f3a8c8fe70
SHA256: ee365bd2079e97b2b77a7100318bf667518481f499fcd48e2d004c4f5b9308c5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: high-level, high-performance dynamic programming language for numerical computing. It provides a sophisticated compiler, distributed parallel execution, numerical accuracy, and an extensive mathematical function library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jupyter-notebook-6.1.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 112704
Depends: libstdc++6, libgcc1, gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jupyter-notebook-6.1.5_1.0_amd64.deb
Size: 31283390
MD5sum: 94e933d8531affb737decf7f18e1f6ec
SHA1: 03f19f9f4d3581dbbaa9f61ccc814389eceb2890
SHA256: ff8d7c1b9b1cbbfc62b33cf712e39c13ed02bcef925fdac3c960825a56a8153c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Jupyter Notebook is an open-source web application that allows you to create and share documents that contain live code, equations, visualizations and narrative text. Uses include - data cleaning and transformation, numerical simulation, statistical modeling, data visualization, machine learning, and much more.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-jupyter-notebook-6.4.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 114809
Depends: libgcc1, gensoft-adm-python-3.8.1, libc6, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-jupyter-notebook-6.4.3_1.0_amd64.deb
Size: 31698416
MD5sum: ddcfeb5cbf97f689999845adae71b0fb
SHA1: b014b8ccc0b2ec6f3112402e05a50acea7d57d14
SHA256: 4d98b0cb7d31963edfc148d15d30b3c24e3eeb8631bbbefdbe5f660cc90cdfad
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Jupyter Notebook is an open-source web application that allows you to create and share documents that contain live code, equations, visualizations and narrative text. Uses include - data cleaning and transformation, numerical simulation, statistical modeling, data visualization, machine learning, and much more.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kaiju-1.7.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3795
Depends: gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kaiju-1.7.3_1.0_amd64.deb
Size: 1677958
MD5sum: a443bdbcf7b5ac00d2f16446a10dd721
SHA1: 519e9f8d39b794c754a2a4157dde9239026fdba3
SHA256: 9360bf3dbd2d9cab71cbf08fb3d6a74b4ae8b4271861f3cbe62ee0a1048e8d1d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Kaiju is a program for sensitive taxonomic classification of high-throughput sequencing reads from metagenomic whole genome sequencing or metatranscriptomics experiments. `
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kaks-calculator-1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 461
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kaks-calculator-1.2_1.0_amd64.deb
Size: 284638
MD5sum: 0f78bd9ef6548fb472ae266747aaad3c
SHA1: 630b53231e2f370c6d42a55022341468831daf9b
SHA256: c46b528277c9d6ca2641323e1b0e122bc82c9105fcf35e1705957a3a2b59c8dd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: KaKs_Calculator adopts model selection and model averaging to calculate nonsynonymous (Ka) and synonymous (Ks) substitution rates, attempting to include as many features as needed for accurately capturing evolutionary information in protein-coding sequences. In addition, several existing methods for calculating Ka and Ks are also incorporated into KaKs_Calculator.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kalign-2.04
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 232
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kalign-2.04_1.0_amd64.deb
Size: 108018
MD5sum: 6816333eb3352b65da47b409324db4df
SHA1: 3935954d60b1aed1ab8cd52eea77e37b1f920387
SHA256: 7789be63af92151c478e2670acb6d8c5b08a2f8c0d19f58d891956f2175775d1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Kalign is a fast and accurate multiple sequence alignment algorithm designed to align large numbers of protein sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kallisto-0.46.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3218
Depends: gensoft-hdf5-1.10.6, gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kallisto-0.46.2_1.0_amd64.deb
Size: 1192294
MD5sum: 7205d13eb707feecbaf520eb89b6ce43
SHA1: 22645e313a3d80511b7c11405ba4933cfa1f95d7
SHA256: 73321693b21ca797ff6dd834d671c7d1e21b4113f750ab676d494e3b5b3d7e48
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: kallisto is a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads with targets, without the need for alignment.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kamrat-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 7055
Depends: gensoft-boost-1.72.0, zlib1g, gensoft-armadillo-9.800.4, gensoft-mlpack-3.4.2, gensoft-hdf5-1.10.6, gensoft-atlas-3.10.2, gensoft-zstd-1.4.4, gensoft-xz-5.2.4, libc6, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-blas-3.8.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kamrat-1.0.0_1.0_amd64.deb
Size: 2035074
MD5sum: 0138ded92b219514e1f3a761dc91d7d0
SHA1: 3fb66a22ce1ad30ddadf0a32f9d8069ebcb445ba
SHA256: 3badd661fa1f7025a6a64cfe5be410fa958e2723c77d3fc0a96c9bf46f7c3db0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: KaMRaT is a C++ tool for finding substrings with interesting properties in large NGS datasets
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kaptive-0.7.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 85158
Depends: gensoft-blast+-2.10.0, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kaptive-0.7.0_1.0_amd64.deb
Size: 25189214
MD5sum: 28499057507c1684d350fb4bd63f67e0
SHA1: d7ff170f8d2ec79825661f46ed6e97dfa11feafe
SHA256: 33c496ad2f097a4bbd04fe88f5342e261ebbeba278c5b2c23b6da2b797f45223
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: reports information about K and O types for Klebsiella genome assemblies.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-khmer-2.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 140675
Depends: libc6, gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-khmer-2.1.2_1.0_amd64.deb
Size: 42081628
MD5sum: 1961174aa1698d9bdd939daa81ee7d1e
SHA1: e3eb1b40ea75988f33b29cc986440336a66146ef
SHA256: 3114e6c246895b389e196f2a68c6f5e0bcec3e0eb77f397e93ca31e557b15015
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a library and suite of command line tools for working with DNA sequence. It is primarily aimed at short-read sequencing data such as that produced by the Illumina platform. khmer takes a k-mer-centric approach to sequence analysis, hence the name.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-king-2.2.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1572
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-king-2.2.4_1.0_amd64.deb
Size: 763704
MD5sum: d98385321014fbdd0cc27c40035ad023
SHA1: 4ff43304cdb735a10b620b1b2da6fa178d158889
SHA256: 4146769e3e7996ddcebe84be8e484180fd9a3a899261f179f9d577923160d0e3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a toolset making use of high-throughput SNP data typically seen in a genome-wide association study (GWAS) or a sequencing project. Applications of KING include family relationship inference and pedigree error checking, population substructure identification, forensics, gene mapping, etc.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-king-2.2.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1599
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-king-2.2.7_1.0_amd64.deb
Size: 775576
MD5sum: c7c9c1d02eb8cb4f358cfa07ac7e0b4f
SHA1: 96ebdcec46e2298749347e87a2d9fcfe9d479a0b
SHA256: 6cc9f68a501340b9aadd7921aff10d70d92d2a6e143117af81750ed1b267d840
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a toolset making use of high-throughput SNP data typically seen in a genome-wide association study (GWAS) or a sequencing project. Applications of KING include family relationship inference and pedigree error checking, population substructure identification, forensics, gene mapping, etc.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kleborate-0.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 123339
Depends: libc6, gensoft-mash-2.2, gensoft-blast+-2.10.0, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kleborate-0.1.0_1.0_amd64.deb
Size: 32708944
MD5sum: 38b701b28b406b1dbd06a07a5567758c
SHA1: b6e9cf2ab3ff92ba0301393527ef62b22ed6ce3e
SHA256: 8f592241c8394c3b6fe82c3e85fc711a0b473e589c82e2e6aae0fa27f42c3481
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a MLST-style approach for identifying ybt and clb variants from genome data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kleborate-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 151380
Depends: gensoft-blast+-2.10.0, gensoft-adm-python-3.8.1, gensoft-mash-2.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kleborate-1.0.0_1.0_amd64.deb
Size: 43872966
MD5sum: 1cff0448e81d41044fe4e2ab509d2676
SHA1: 2203679a58f581cf07b135ae4c6bc48e06ac89b8
SHA256: 03964db6e50c3d79ebf4ad385fba99c2e77c4c96e9bdda61ae08a9b00b611bba
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a MLST-style approach for identifying ybt and clb variants from genome data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kleborate-2.0.0
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 163307
Depends: gensoft-mash-2.2, libc6, gensoft-blast+-2.10.0, gensoft-adm-python-3.8.1, libgcc-s1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kleborate-2.0.0_2.0_amd64.deb
Size: 47014458
MD5sum: 121f6ea8cba287baa546e88ccdb4fd26
SHA1: 20e7e39de28cd66fcd3f4752db06d018bf650719
SHA256: 2ff9e28459e1be4950b7afd0ddcb60cc98e3cf214c956d034dece455d0c9b80e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a MLST-style approach for identifying ybt and clb variants from genome data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kleborate-2.3.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 195122
Depends: libc6, gensoft-blast+-2.13.0, gensoft-mash-2.3, zlib1g, gensoft-adm-python-3.8.1, libgcc
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kleborate-2.3.2_1.0_amd64.deb
Size: 54630814
MD5sum: 3c7ae8e65bd0ec7a8161622c4ed070e0
SHA1: 3f18279b4ee4282b64982577a97114b7b01e3177
SHA256: fd59054addddab69a2ab0bbdb579490bdadc1214e1f7394314bf5db065611be2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a MLST-style approach for identifying ybt and clb variants from genome data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kltpicker-1.2.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 267484
Depends: gensoft-cuda-11.2, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kltpicker-1.2.8_1.0_amd64.deb
Size: 88612232
MD5sum: 982387e31860517ff1b785c36a73fdd4
SHA1: 94136c093f1bfd07433c3732b709f83f312b239d
SHA256: 21f850eae2ecb8ce6c04573068d30284ad716089f541d121bb11ef6d9f08ef1d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: particle picking using data-driven optimal templates
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kma-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 338
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kma-1.0.1_1.0_amd64.deb
Size: 157696
MD5sum: d6c0cc4c7a2d81f144cda7f520247433
SHA1: 68e458e24d392b830deb79a2596884dd773c5625
SHA256: f9e4d07a2c866c58d9789b1f1b8be6497e80548ddc39789ffced1cc293724464
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: KMA is a mapping method designed to map raw reads directly against redundant databases, in an ultra-fast manner using seed and extend. KMA is particulary good at aligning high quality reads against highly redundant databases, where unique matches often does not exist. It works for long low quality reads as well, such as those from Nanopore. Non-unique matches are resolved using the ConClave sorting scheme, and a consensus sequence are outputtet in addition to other common attributes, based on our users demands
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kma-1.2.22
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1486
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kma-1.2.22_1.0_amd64.deb
Size: 783588
MD5sum: 04b447b7478a98fbb45ffd5c8ac3fb22
SHA1: 9eef8a919ad15cc4feb734780fdabece18e82801
SHA256: 19d33adbe65daa674a2e008ec3c571cdddc4a4874885e62de64a7531cc607925
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: KMA is a mapping method designed to map raw reads directly against redundant databases, in an ultra-fast manner using seed and extend. KMA is particulary good at aligning high quality reads against highly redundant databases, where unique matches often does not exist. It works for long low quality reads as well, such as those from Nanopore. Non-unique matches are resolved using the ConClave sorting scheme, and a consensus sequence are outputtet in addition to other common attributes, based on our users demands
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kma-1.3.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1605
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kma-1.3.4_1.0_amd64.deb
Size: 837274
MD5sum: 44fd63b6772f3781be65a1f878519adb
SHA1: 256fdb16ca57ccb13ab85af95ecbcd92ce1af23d
SHA256: 0e4c1e989ec4b985eaa127c36292ec59d3b5feb410073e6297e3620eb3657006
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: KMA is a mapping method designed to map raw reads directly against redundant databases, in an ultra-fast manner using seed and extend. KMA is particulary good at aligning high quality reads against highly redundant databases, where unique matches often does not exist. It works for long low quality reads as well, such as those from Nanopore. Non-unique matches are resolved using the ConClave sorting scheme, and a consensus sequence are outputtet in addition to other common attributes, based on our users demands
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kma-1.4.14
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1774
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kma-1.4.14_1.0_amd64.deb
Size: 843486
MD5sum: d32c8d9190f6998f648ebecc6d5f9f3e
SHA1: a2b3afc12136bc126f43afb4cc196afeae647655
SHA256: 9477526148ca11c5fd42e0d61edfe918218ccab3ce5bdb64c6a3bf52d3833ecb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: KMA is a mapping method designed to map raw reads directly against redundant databases, in an ultra-fast manner using seed and extend. KMA is particulary good at aligning high quality reads against highly redundant databases, where unique matches often does not exist. It works for long low quality reads as well, such as those from Nanopore. Non-unique matches are resolved using the ConClave sorting scheme, and a consensus sequence are outputtet in addition to other common attributes, based on our users demands
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kmc-3.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4796
Depends: gensoft-gcc-9.2.0, libc6, gensoft-zlib-1.2.11
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kmc-3.0.1_1.0_amd64.deb
Size: 1622918
MD5sum: d074756b510a5fd53934cff2f3875b4f
SHA1: 8faba381721d76f0a677d39aaa3d61de6e05f360
SHA256: 78aeff66cd98f9b3956da11116e068a469be5df622e8b109d1d168849c3ee520
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: KMC-K-mer Counter is a utility designed for counting k-mers (sequences of consecutive k symbols) in a set of reads from genome sequencing projects. KMC scans the raw reads and produces a compact representation of all non-unique reads accompanied with number of their occurrences. The algorithm implemented in KMC makes use mostly of disk space rather than RAM, which allows to use KMC even on rather typical personal computers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kmc-3.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4838
Depends: libc6, gensoft-zlib-1.2.11, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kmc-3.1.1_1.0_amd64.deb
Size: 1645638
MD5sum: 4ffcd3b9700c1fd159ea3cb6703cd14a
SHA1: 272924a35d146259cdd67ab1870275f8e258901b
SHA256: c74cc6555b666155ec1dd4013f4a1dd1ab31301cf7cfba1151f2f88300062b56
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: KMC-K-mer Counter is a utility designed for counting k-mers (sequences of consecutive k symbols) in a set of reads from genome sequencing projects. KMC scans the raw reads and produces a compact representation of all non-unique reads accompanied with number of their occurrences. The algorithm implemented in KMC makes use mostly of disk space rather than RAM, which allows to use KMC even on rather typical personal computers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kmc-3.2.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 14663
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kmc-3.2.1_1.0_amd64.deb
Size: 3725806
MD5sum: d177a83f0fac555c0f1d47a7b37227ee
SHA1: 278548069ab3a8dda052897cef64d7f4aaf701a7
SHA256: a8921803cad825dd9d14c42579af4837ca8c39f884d799ccad05e9f1c21c5d84
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: KMC-K-mer Counter is a utility designed for counting k-mers (sequences of consecutive k symbols) in a set of reads from genome sequencing projects. KMC scans the raw reads and produces a compact representation of all non-unique reads accompanied with number of their occurrences. The algorithm implemented in KMC makes use mostly of disk space rather than RAM, which allows to use KMC even on rather typical personal computers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kmer-db-1.7.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 453
Depends: zlib1g, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kmer-db-1.7.5_1.0_amd64.deb
Size: 197310
MD5sum: e242e2216a75b6bd4325ff87fffaf696
SHA1: a9a38f648c19445d617a6a7703af1aa6bae3574c
SHA256: 147e0d6bf44d788c5aaee89977d3e2b13bf68396b231d056ece8daa376cf590d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Kmer-db is a new tool for estimating evolutionary relationship on the basis of k-mers extracted from genomes or sequencing reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kmerfinder-3.0.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 16
Depends: gensoft-adm-python-3.8.1, gensoft-kma-1.3.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kmerfinder-3.0.2_1.0_amd64.deb
Size: 7176
MD5sum: d5195b2ef37ed23593269605370453f6
SHA1: 792b88dd5d59aeb64ed65aaeb5f45b1035918f8c
SHA256: 2408798342628c0aa1a2338f8feb8eb698ffa3e7c72cc9350fc23d3e715644b6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: find the best match (species identification) to the reads in one or more fastq files or one fasta file in a (kmer) database produced using the KMA program. The method outputs the best matches, along with additional taxonomic information, if that option is selected.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kmergenie-1.7051
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7294
Depends: gensoft-gcc-9.2.0, gensoft-r-3.6.2, gensoft-adm-python-2.7.17, libc6, gensoft-ghostscript-9.50, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kmergenie-1.7051_1.0_amd64.deb
Size: 2458102
MD5sum: feb92a826ff08920a5c30ce63e5263b9
SHA1: ed660426d306da5cc3b045afb5f3e93690784ec0
SHA256: 2dd7eda7a4d7aa6cc264bce68465622dfe41fff1d682d7418d14d2cd306fbaea
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: estimates the best k-mer length for de novo assembly
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kmernorm-1.05
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 49
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kmernorm-1.05_1.0_amd64.deb
Size: 16548
MD5sum: cedad623d0c29ce3dc2ef1cbb7cb019f
SHA1: 8b9b0fa89e7f33a0c4f07ab3626ac650a0369983
SHA256: c1809f01ae8767a155866aa20bcf756d4a00e20849b8836ef2d9bba25eefe366
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: normalizes the kmer depth to the target coverage using sampling method and filters the reads according to the cutoff threshold.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kmerstream-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 165504
Depends: gensoft-gcc-9.2.0, libc6, gensoft-adm-python-2.7.17, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kmerstream-1.1_1.0_amd64.deb
Size: 49370588
MD5sum: 2425b28d3eebdaed3dd40a6da541f7d9
SHA1: b5bdd21672c0c0ba69d88384922785be8b75d168
SHA256: 9bd761d0deaaf3ac70ee9d9a484c54b84ce8aff3bca97669cd9dfa0faf0ef1d0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Streaming algorithm for computing kmer statistics for massive genomics datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kraken-2.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 742
Depends: libc6, rsync, ftp, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kraken-2.1.1_1.0_amd64.deb
Size: 316588
MD5sum: ec068d13e4ced2bbda43018464df3d08
SHA1: 8107748405833e59ffdc1ce1d7d3c1beb9e31c4d
SHA256: 4a8c0abb4f92cd44cc1b95d97d30dc4fa3c3c70d6c1eb545b1efebd6e72cc01e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kraken-2.1.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 919
Depends: libc6, rsync, ftp, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kraken-2.1.3_1.0_amd64.deb
Size: 367910
MD5sum: a43130d09756e50fde7ae48484e0c6e7
SHA1: c8845d747be6c9b5721bc8e6e3d2c2351d68a63a
SHA256: 4145b47a37092aa99a5a27250d9066aff5fbf92c991ff81c53ede3db4468537d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-krakenuniq-0.5.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2756
Depends: gensoft-jellyfish-1.1.12, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, libc6, zlib1g, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-krakenuniq-0.5.8_1.0_amd64.deb
Size: 930350
MD5sum: 72faaa2b488b53206eb8b0c98b4a48c4
SHA1: 86642e8bde8acafae150f62cd235e30c06246069
SHA256: dbf7a3b3785479958a5edf1e8df13b6ec42c3fcb51b8c022e0f05b9a0a08eda5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a fast taxonomic classifier for metagenomics data with unique k-mer counting
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kronatools-2.7.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 842
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kronatools-2.7.1_1.0_amd64.deb
Size: 220242
MD5sum: af693faab48f585de8e0dc7e5e015971
SHA1: aa1700575bcd81ef99979adba2036380c4034e80
SHA256: 5141503d78e4eed0f754cbdecf4abec020281c8944e8da019a09b967950bc829
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Hierarchical data browser. Krona allows hierarchical data to be explored with zoomable HTML5 pie charts. Krona charts can be created using an Excel template or Krona Tools, which includes support for several bioinformatics tools and raw data formats.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ksnp3-1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 139187
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ksnp3-1_1.0_amd64.deb
Size: 131680932
MD5sum: 2da71de3995bdef6bad8962414c16b51
SHA1: a357065b1ae20761fc18fdf05f5e5434c530fbf7
SHA256: 3e52474ddd9f3937e9e7adc0c47cf9112d49cae70eb617b58c1d413e5b15dc9f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: kSNP identifies the pan-genome SNPs in a set of genome sequences, and estimates phylogenetic trees based upon those SNPs. SNP discovery is based on k-mer analysis, and requires no multiple sequence alignment or the selection of a reference genome, so kSNP can take 100s of microbial genomes as input. A SNP locus is defined by an oligo of length k surrounding a central SNP allele. kSNP can analyze both complete (finished) genomes and unfinished genomes in assembled contigs or raw, unassembled reads. Finished and unfinished genomes can be analyzed together, and kSNP can automatically download Genbank files of the finished genomes and incorporate the information in those files into the SNP annotation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ktreedist-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 75
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ktreedist-1.0_1.0_amd64.deb
Size: 19478
MD5sum: a23abb34a3de9e6ff04c690d215b89da
SHA1: ed09e97cc907954350d9cddee2d32548105af37a
SHA256: 2c7cbe63957b138cbc1fab5ff83b133292f6184d3ceae464acaf825ab46fc390
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Calculate the minimum branch length distance (or K tree score) from one phylogenetic tree to another. The K tree score provides a measure of the difference in both topology and branch lengths between two trees after scaling one of them to have a global divergence as similar as possible to the other tree
License: unknown
Vendor: Institut Pasteur

Package: gensoft-kyoto-20170410
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 21158
Depends: gensoft-lzo-2.10, libc6, gensoft-gcc-9.2.0, zlib1g, gensoft-lua-5.1.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-kyoto-20170410_1.0_amd64.deb
Size: 5669384
MD5sum: c1cee269f396350984a4c2b4ef92be5b
SHA1: 2e3810858207e1ec39e9fb005d565204925649f0
SHA256: 34c8625f522e7ceb62b1f210d0438c1e1119feca6e0ba6b6bce4a2feb6d03dae
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Kyoto Tycoon is a lightweight network server on top of the Kyoto Cabinet key-value database, built for high-performance and concurrency.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lagan-2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1118
Depends: gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lagan-2.0_1.0_amd64.deb
Size: 296274
MD5sum: cfced1f5e6cf1007b73a105a58c1d1da
SHA1: 08441634e896cf7b8411abbc8cbe42684f6658b5
SHA256: 6431bcf83b2aa18ec5ff036659dbc0af91af0e35622601d08863103ee2adaaad
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tools for genomic alignment. These include the MLAGAN multiple alignment tool, and Shuffle-LAGAN for alignment with rearrangements. All three are based on the CHAOS local alignment tool and combine speed (regions up to several megabases can be aligned in minutes) with high accuracy.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lammps-2020.03.03
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 189082
Depends: zlib1g, libc6, gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lammps-2020.03.03_1.0_amd64.deb
Size: 67820896
MD5sum: a6dcf948ee96ba88fa02defce93bcc35
SHA1: 4295b6e23e750044e98235a89f854bd1c07ee1e1
SHA256: 1ae4999fafefa8988546c36451ddbfaf19cbc3cbec06f882652979f4e0829b8f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lap-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10671
Depends: gensoft-bowtie2-2.3.5.1, gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lap-1.1_1.0_amd64.deb
Size: 3297312
MD5sum: 8da9db6674a981993155491f6a4a3d3d
SHA1: 169188b62811434cffcbefb25df4fcb7c1603c12
SHA256: 074ba76b1d2e0ef34d7f1ca4ea22db38f6535c0f5ebbc459a2ad377fa8ec4957
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a de novo probabilistic measure of assembly quality which allows an objective comparison of multiple assemblies generated from a same set of reads. Specifically, we define the quality of an assembly as the conditional probability of the sequenced reads given the sequence output by the assembler, value maximized by the true genome sequence.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lapack-3.10.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 212027
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lapack-3.10.0_1.0_amd64.deb
Size: 177080702
MD5sum: 0aeeb9e70f360140fd350ce175baaee4
SHA1: 3b17ac8a47bf5408426b74303ea84cf3b7bd22fa
SHA256: 8cc0102197cf305762a19ee0f243610a4fc619ef136bf621122419fd183cab57
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a Fortran 90 library that provides routines for solving systems of simultaneous linear equations, least-squares solutions of linear systems of equations, eigenvalue problems, and singular value problems. The associated matrix factorizations (LU, Cholesky, QR, SVD, Schur, generalized Schur) are also provided, as are related computations such as reordering of the Schur factorizations and estimating condition numbers. Dense and banded matrices are handled, but not general sparse matrices. In all areas, similar functionality is provided for real and complex matrices, in both single and double precision
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lapack-3.9.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 11734
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lapack-3.9.0_1.0_amd64.deb
Size: 4488446
MD5sum: 37c5ae011e32120cc13fb87b869eeae0
SHA1: c3f42ec435dcd292e82bbb735edf5c6fa3178191
SHA256: be71c10e5a0b7a3235a54fe392de70f2e4388f373a1d13c2564dd91fe44171c1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a Fortran 90 library that provides routines for solving systems of simultaneous linear equations, least-squares solutions of linear systems of equations, eigenvalue problems, and singular value problems. The associated matrix factorizations (LU, Cholesky, QR, SVD, Schur, generalized Schur) are also provided, as are related computations such as reordering of the Schur factorizations and estimating condition numbers. Dense and banded matrices are handled, but not general sparse matrices. In all areas, similar functionality is provided for real and complex matrices, in both single and double precision
License: unknown
Vendor: Institut Pasteur

Package: gensoft-last-1060
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20493
Depends: gensoft-parallel-20200222, libc6, gensoft-gcc-9.2.0, zlib1g, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-last-1060_1.0_amd64.deb
Size: 6860832
MD5sum: ab0a34945e70078c23891e6ef503b18a
SHA1: 5a787b0a17530e4e7e8f4808b95c6017eab61e1d
SHA256: 74418f71ec54223fdf88114488a20a4182d06ee28ee0f9043b081d3cd7d78ad4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LAST finds similar regions between sequences, and aligns them.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-last-1180
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 20355
Depends: gensoft-adm-python-2.7.17, zlib1g, gensoft-gcc-9.2.0, libc6, gensoft-parallel-20200222
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-last-1180_1.0_amd64.deb
Size: 6890364
MD5sum: b3b8dcf34217c89a724562f9aa1b4433
SHA1: 2c73c7cc31cdd642952e40747b8eb98ada4c44f3
SHA256: 1584b5c04b6bb5f1828d078e1c9f83d8b94bb1f1e1a44c1889e76a2844b183a6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LAST finds similar regions between sequences, and aligns them.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-last-1389
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 20708
Depends: zlib1g, gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, gensoft-parallel-20200222, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-last-1389_1.0_amd64.deb
Size: 7043266
MD5sum: c6ba1bbc090e8c625ccc57f0693cb412
SHA1: 3d33733851429a1895a5ae9ec87aea384f18708d
SHA256: f29dea32dbc9753c9b931825d2df91c3a19b6fd41c34c0bfd37ca5dde3f92c58
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LAST finds similar regions between sequences, and aligns them.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lastz-1.04.03
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10743
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lastz-1.04.03_1.0_amd64.deb
Size: 5149830
MD5sum: 726abe3cc16715faeb950ced50c03f75
SHA1: 574ab23893253da121ca3b3086a7b8259cc0f281
SHA256: d3b5918843969a657589d1ab7a391b08be27789528f252d30040de3b44dd77f2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LASTZ is a program for aligning DNA sequences, a pairwise aligner.  Originally designed to handle sequences the size of human chromosomes and from different species, it is also useful for sequences produced by NGS sequencing technologies such as Roche 454.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lastz-1.04.22
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 10757
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lastz-1.04.22_1.0_amd64.deb
Size: 5153904
MD5sum: 2a7687162dd65bd9cd04a1ffa4c1e710
SHA1: 246fff02db93a8a0d6b1d8a696c0fcf239b58ae2
SHA256: 120db14dccb3982d3d35a38eaed9709723147646655443afc12a8958c0c525ca
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LASTZ is a program for aligning DNA sequences, a pairwise aligner.  Originally designed to handle sequences the size of human chromosomes and from different species, it is also useful for sequences produced by NGS sequencing technologies such as Roche 454.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lcms2-2.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13001
Depends: libc6, gensoft-libtiff-4.1.0, gensoft-xz-5.2.4, zlib1g, gensoft-libjpeg-turbo-2.0.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lcms2-2.9_1.0_amd64.deb
Size: 8357908
MD5sum: 12d48f11cc713e800ae91f1c58a88b54
SHA1: ac46d100bb192a463ee63d3d781dce8caaf71f5e
SHA256: 9066816213ed368bf0fed55b3653f45743cdc7296a5b4c154115a945ac3fb76e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Little CMS intends to be an OPEN SOURCE small-footprint color management engine, with special focus on accuracy and performance.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ldc-1.32.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 417132
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ldc-1.32.0_1.0_amd64.deb
Size: 115708396
MD5sum: cac4b07f0c7123bd2b61201b8e0b6c88
SHA1: 84b18f413d6134dda8b6430b0ec1f7f0f86b1bd9
SHA256: ba4409519f3355c3fa650903c9346a9bd7c583ca68afbeaa671ae62366ce90ee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The LLVM-based D Compiler.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lesstif-0.95.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12522
Depends: gensoft-xorg-libs-1.1, libc6, gensoft-freetype-2.10.1, gensoft-libpng-1.6.37, zlib1g, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lesstif-0.95.2_1.0_amd64.deb
Size: 4605398
MD5sum: 415bbb89c92ad8979e59b6488f920c3e
SHA1: cf93526e7bb1e591a690e4107ac553006571689c
SHA256: 881584080a4fbf3f3f419ddac0500d9b9a81e81edc8a73378a2c91bb6d4be370
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LessTif is an an Open Source version of OSF/Motif
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lib-sonlib-july2012-0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2060
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lib-sonlib-july2012-0_1.0_amd64.deb
Size: 603832
MD5sum: 72c12108f3db0c96706691433fa35dd1
SHA1: 68050cc25d86607144514fda00524f34127469fd
SHA256: fc67e9d73a44e2c88e19ea4ff8dac9e063db66a98a685251b85fa9f3b7232592
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a compact C/Python library for sequence analysis in bioinformatics
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lib-sonlib-september2022-0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 10467
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lib-sonlib-september2022-0_1.0_amd64.deb
Size: 3180268
MD5sum: e18ba385d66b4ed0b5436a77f64d0c21
SHA1: b3ef58923df7295ee056103b3146ccaa5ec35dae
SHA256: a5a0b186ab1fdedf21237131840ddc6521b9b85133d639d313d525453f097579
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a compact C/Python library for sequence analysis in bioinformatics
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libaec-1.0.6
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 233
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libaec-1.0.6_1.0_amd64.deb
Size: 65424
MD5sum: 1f0c97c6fe0128e13c095b946e7a776b
SHA1: 5c6f512b6615842c99ae844524e909df21b0f592
SHA256: b4984b1d12e07b409a602b286d38580888097e9d80743f493ad33b5972c2bc72
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Adaptive Entropy Coding library provides fast lossless compression of 1 up to 32 bit wide signed or unsigned integers (samples).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libaio-0.3.110
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 98
Depends: zlib1g, libc6, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libaio-0.3.110_1.0_amd64.deb
Size: 21314
MD5sum: ddbf97803ba76c96f71be4fbf30b53b6
SHA1: 608e70204fccd488aa34ca74d308a00ba59f664d
SHA256: fbfe2876cd942b17e4224ab4e073b05c8711701fa6ab9e5346175c3db6908608
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Linux-native asynchronous I/O facility ("async I/O", or "aio") has a richer API and capability set than the simple POSIX async I/O facility. This library, libaio, provides the Linux-native API for async I/O. The POSIX async I/O facility requires this library in order to provide kernel-accelerated async I/O capabilities, as do applications which require the Linux-native async I/O API.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libarchive-3.4.2
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20348
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libarchive-3.4.2_1.0_amd64.deb
Size: 6823228
MD5sum: d3327696a22afb8bf620077a22b3e0fc
SHA1: 8a914f4257b4519abb5197cad2d0d2444e33dd20
SHA256: 61f22fc19797667e9eaf132517c719a37cc9b8a4597c3dce7ea9858d33a885de
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multi-format archive and compression library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libbam-0.1.19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2516
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libbam-0.1.19_1.0_amd64.deb
Size: 829818
MD5sum: 5ccd6992befcd52d5da6ae0e637850d7
SHA1: eba970697f326067c9513ff8be85a73c5c4bdcfe
SHA256: f20e567a2f20ac9e49076c1a14303bfd0fb6e0b66f8fb2c435383b5631a68670
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The BAM library provides I/O and various operations on manipulating nucleotide sequence alignments in the BAM (Binary Alignment/Mapping) or SAM (Sequence Alignment/Map) format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libbam-2.5.1
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 802
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libbam-2.5.1_1.0_amd64.deb
Size: 267598
MD5sum: 858be22022e67eded12c1d0ff9984746
SHA1: e29e84d6ba443a09b207b755b930432ec7ac20f5
SHA256: 2c136139af1f7cf94a451738a70dc938762aeef237918ff9c9842ba234f19bc0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The BAM library provides I/O and various operations on manipulating nucleotide sequence alignments in the BAM (Binary Alignment/Mapping) or SAM (Sequence Alignment/Map) format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libbigwig-0.4.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 757
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libbigwig-0.4.6_1.0_amd64.deb
Size: 248036
MD5sum: 3727e1a2ae5d4df6fc5b61607c3081cb
SHA1: dff83799a4760315f08adaa50efb7991b104de1f
SHA256: 55834ea4c1545777f1fc4f03f8dea2a37a4191afb9d702b7a1f944ac700ea84a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A C library for reading/parsing local and remote bigWig and bigBed files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libbigwig-0.4.7
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Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 757
Depends: zlib1g, gensoft-curl-7.68.0, libc6, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libbigwig-0.4.7_1.0_amd64.deb
Size: 248946
MD5sum: ee5896f460d976741931019858dfe95f
SHA1: d764dad226754df3f344f3a24989ec64ab061104
SHA256: 9fdb24b29a55224e0ae1a8082b551c5bfa9b2dbf5db3519f7bc09cc90923f538
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A C library for reading/parsing local and remote bigWig and bigBed files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libccd-2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 782
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libccd-2.1_1.0_amd64.deb
Size: 219336
MD5sum: e51c9a022c994121b3b762887e118835
SHA1: 55c0c8d416df64d1120c27a1c4c757ca6994ea96
SHA256: 1b6a4a24ae1cc0c58f7f543e511898189a2148acb6493b551c780863d7966189
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: libccd is library for a collision detection between two convex shapes. libccd implements variation on Gilbert-Johnson-Keerthi algorithm plus Expand Polytope Algorithm (EPA) and also implements algorithm Minkowski Portal Refinement (MPR, a.k.a. XenoCollide)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libccp4-6.5.1
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8338
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libccp4-6.5.1_1.0_amd64.deb
Size: 2404842
MD5sum: 2cccc1417dd42942a02863da099c798a
SHA1: 9d5c3a67544c280f986d4502669ae6543cb1b97c
SHA256: 3e53b326f724f975c5c732b0c23eb9773c7c800b0cfecf5e11126b5cf2e9f850
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Protein X-ray crystallography toolkit - Libraries
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libcerf-1.13
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 172
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libcerf-1.13_1.0_amd64.deb
Size: 47700
MD5sum: d95995e2434ea1e692263520f4f9f7ca
SHA1: b246fad6b3d1a3b7a15b4933ff3da3f3e00b20e4
SHA256: 037307c1ac081aa16a266061a9ad7cc1055af5aa400424465340a32155460d99
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a self-contained numeric library that provides an efficient and accurate implementation of complex error functions, along with Dawson, Faddeeva, and Voigt functions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libdeflate-1.8
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Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 286
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libdeflate-1.8_1.0_amd64.deb
Size: 111992
MD5sum: c01fc8f2a3d98b7d3a384d03f98ef7fa
SHA1: d4920adae1cb14a1109dcf43b12358d5f705183a
SHA256: 30de7b9821e808401efec79fe4499473911e17215ac3414c9f0e37f335d55af9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Heavily optimized library for DEFLATE/zlib/gzip compression and decompression.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libdivsufsort-2.0.1
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Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 111
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libdivsufsort-2.0.1_1.0_amd64.deb
Size: 50346
MD5sum: 0a1f2923ba8efab1aeb95eb08eccfd32
SHA1: 546c3a6da80208b8c1191e89952579d9a71e4929
SHA256: 9a37898b9ce6be1002e2e49720e42b8c79d9b579b6e23a3bdd5830bc878846c3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A lightweight suffix-sorting library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libdrm-2.4.100
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1981
Depends: gensoft-xorg-libs-1.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libdrm-2.4.100_1.0_amd64.deb
Size: 662580
MD5sum: 85125087df7be5e0e7fda7778e167b20
SHA1: 88882f6e433c8df9ed9c2a2cd5860a1f48c35bc3
SHA256: 8855cc37b322e236f276b4ad305b039659c6defc9e7d1cab79ef78c2ee027cb7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LIBDRM is the cross-driver middleware which allows user-space applications (such as Mesa and 2D drivers) to communicate with the Kernel by the means of the DRI protocol
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libepoxy-1.5.5
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7914
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libepoxy-1.5.5_1.0_amd64.deb
Size: 1795512
MD5sum: c9c6ad75b363aedbe5a0865fea6874b2
SHA1: fd17abb1039aa4e153cb7161e832cca00cf86111
SHA256: ff5570f09d65209a49f124f536a2ba73ea8b4ac662f46c0c622060eb476cc43c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Epoxy is a library for handling OpenGL function pointer management for you
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libffi-3.2.1
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 156
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libffi-3.2.1_1.0_amd64.deb
Size: 55694
MD5sum: 5653d2da9980680d23ade98639373c02
SHA1: f3d4157b9dd551e0e64eaf5546115f2935b364af
SHA256: 851df6c8fd60d4c8909095ecb96c69ff474af4d0c0468343811f0e375284cb9f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A Portable Foreign Function Interface Library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libffi-3.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 351
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libffi-3.3_1.0_amd64.deb
Size: 234192
MD5sum: 9c7dce3236272f010d4ca3b384876dd1
SHA1: c265320ced7f1b357f7a57cb471e7042a159d830
SHA256: c7b478e37c28450c870df7711852a3828e67f39cd7d61459f9c742790a60ebd1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A Portable Foreign Function Interface Library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libfuse-2.9.9
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Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 3181
Depends: gensoft-libiconv-1.16, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libfuse-2.9.9_1.0_amd64.deb
Size: 896960
MD5sum: 53dd5743c13a01be57215717ad257265
SHA1: 69893591e2be7feba5a0e24cbc888775b8044dcb
SHA256: 72a3dedd90ccced56e73b011142c59315c9193f74f2bf542b71e820d89847377
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The reference implementation of the Linux FUSE (Filesystem in Userspace) interface
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libfuse-3.12.0
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1310
Depends: libc6, gensoft-libiconv-1.16
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libfuse-3.12.0_2.0_amd64.deb
Size: 438742
MD5sum: 8563bb1526141f44c532cd4db2d69409
SHA1: be6540ee86a20d2a091870facb632e6565ca2299
SHA256: 9ee90e6b2ece34027ee8f10e5a5f843d021b3ea376aa0170f3c9e2e229515101
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The reference implementation of the Linux FUSE (Filesystem in Userspace) interface
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libgd-gd-2.2.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3701
Depends: gensoft-libtiff-4.1.0, zlib1g, libc6, gensoft-xz-5.2.4, gensoft-freetype-2.10.1, gensoft-libpng-1.6.37, libbz2-1.0, gensoft-fontconfig-2.13.91, gensoft-xorg-libs-1.1, gensoft-libjpeg-turbo-2.0.4, gensoft-expat-2.2.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libgd-gd-2.2.5_1.0_amd64.deb
Size: 1083714
MD5sum: c6abde5f73e740c1fc772467cfe95285
SHA1: 16e8260c58be797fce86cd7a9337c00e3f8205d8
SHA256: b6ee37cd758f9abb1354e8f6b27c3692253f24a3f25ef5693344929692da617d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libgenome-1.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 36082
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libgenome-1.3.1_1.0_amd64.deb
Size: 6604078
MD5sum: 11c6c863d35c8a18d592742305e99e19
SHA1: ce785faac2892950217d89166500cc77e37a9bd9
SHA256: bbd9bc3f19f52ed35c5eb69b6907681d2190087305fbb70656cfba450446d5ea
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: toolkit for developing bioinformatic related software in C++.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libgit2-0.28.4
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4329
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libgit2-0.28.4_1.0_amd64.deb
Size: 1626258
MD5sum: b483a780582b66148e7c9a08fc31ff53
SHA1: 2f87a120d2614faa1fb6d54d449fe26a51b38427
SHA256: 25f8e5155537cd2523dc508f60922614fd34e34330d4b3fe6b94be64ce606ef2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: libgit2 is a portable, pure C implementation of the Git core methods provided as a re-entrant linkable library with a solid API, allowing you to write native speed custom Git applications in any language which supports C bindings.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libgtextutils-0.7
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 421
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libgtextutils-0.7_1.0_amd64.deb
Size: 129804
MD5sum: 93ab36eef36f5662b36633072b728f6b
SHA1: 618e2ff75022f547926fac66eb0fe0451994e727
SHA256: 52d9db365aaa921a22933d649471110c70d4caacddab08591b5a8c87390ec765
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Gordon-Text_utils-Library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libhandlegraph-5e1a64db
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 34955
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libhandlegraph-5e1a64db_1.0_amd64.deb
Size: 7425116
MD5sum: 991add06492005e3e60d14e0d8aa2e0f
SHA1: 72d11792c116fb11c20d9a7553cb6f9a10f0e5d8
SHA256: 093576d0a94853e4a56451c4c54456bdb8968ea2dbb89f2e41fa7fb18bc8b3e4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A handle-based abstraction for graph access
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libiconv-1.16
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1935
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libiconv-1.16_1.0_amd64.deb
Size: 955168
MD5sum: 0ca81bf33c8e84ccfa7a83354e25e0de
SHA1: 86231f9312597bf365d84c698f1b421110595aa2
SHA256: 1ef6d1d432d5d59c3c7ae561b56e790b53e60e27ea93410fc4422a82d32500b0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Accessibility Toolkit provides the set of accessibility interfaces that are implemented by other toolkits and applications. Using the ATK interfaces, accessibility tools have full access to view and control running applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libimagequant-2.12.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 217
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libimagequant-2.12.6_1.0_amd64.deb
Size: 101086
MD5sum: 2ed103132b3eb13f31d5dd85abfcf090
SHA1: 367453110264d09b7a27888e2edb3ee44bd17bda
SHA256: 9134bb5a53c3ead626607a099956dc8c4fed302b3611f511a69a660a6dcf8082
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Small, portable C library for high-quality conversion of RGBA images to 8-bit indexed-color (palette) images.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libjpeg-turbo-2.0.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2745
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libjpeg-turbo-2.0.4_1.0_amd64.deb
Size: 781460
MD5sum: 288ce1cf5e7f711fa0c4fe0fe7b5b785
SHA1: 485f13f1b15ebb54bacd4644469f23948bc9e488
SHA256: c1f3d01ea43bba05b4b87e2a2afeee19f98fe3578f3b3f86b849bab9aa0634c1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: libjpeg-turbo is a JPEG image codec that uses SIMD instructions (MMX, SSE2, AVX2, NEON, AltiVec) to accelerate baseline JPEG compression and decompression on x86, x86-64, ARM, and PowerPC systems.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libjpeg-turbo-2.0.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2868
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libjpeg-turbo-2.0.6_1.0_amd64.deb
Size: 808180
MD5sum: c7c51ca079ee4533a0d3c146087758b5
SHA1: 53963c99f45db32a52db4d5ee3bed85645426cf6
SHA256: 862ef9d7a92c7f81288dbb7eb3c3ee919aa7913830e54a22a747c51b94108b39
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: libjpeg-turbo is a JPEG image codec that uses SIMD instructions (MMX, SSE2, AVX2, NEON, AltiVec) to accelerate baseline JPEG compression and decompression on x86, x86-64, ARM, and PowerPC systems.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libmagic-5.38
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6474
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libmagic-5.38_1.0_amd64.deb
Size: 613784
MD5sum: a1351da7af80b89443cf9ae1d6e6a6e8
SHA1: 28794671a68f7b82a85e0e490685b07030164f4e
SHA256: 725eac0d34e4443931894a9bac71adffbeacd0e63378fbae6363034a85375efd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libmaus2-2.0.813
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 234202
Depends: gensoft-snappy-1.1.8, gensoft-gmp-6.2.0, gensoft-curl-7.68.0, libssl1.1, gensoft-xz-5.2.5, libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libmaus2-2.0.813_1.0_amd64.deb
Size: 32723886
MD5sum: 9e21e088e9fab2fff297522c58b763e9
SHA1: fa123e0e4822ad71e0fb75f31ef1ee141723b29f
SHA256: 2b3f1585fefb4ade50ced3b8a2c64a392a696bbd371baa4e62f631515067a788
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: collection of data structures and algorithms
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libmems-1.6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 175496
Depends: gensoft-libgenome-1.3.1, gensoft-libmuscle-1.0.0, libc6, gensoft-gcc-9.2.0, gensoft-boost-1.72.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libmems-1.6.0_1.0_amd64.deb
Size: 35323182
MD5sum: 13f5ee9587ce7c0f037b4f5112c24a9b
SHA1: 44fa11c7a98c3d26ac247ca116148e5e33eeb54c
SHA256: 4672dba057f7659418752ea506270d64701db4bd2cd54c62cf00d82b41a173a0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: software development library to support DNA string matching and comparative genomics.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libmng-2.0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5605
Depends: zlib1g, libc6, gensoft-libjpeg-turbo-2.0.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libmng-2.0.3_1.0_amd64.deb
Size: 1570548
MD5sum: eb394247a68d479f823a4bf808322e40
SHA1: 990477c94bc1c08d65d790c5595942af90032cfd
SHA256: 441a4f70728840a04cecc9ea6f1d57d9e49cae690c889c38f4e019043c7907dc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: libmng -THE reference library for reading, displaying, writing and examining Multiple-Image Network Graphics. MNG is the animation extension to the popular PNG image-format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libmolgrid-0.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 157231
Depends: libbz2-1.0, gensoft-zstd-1.4.4, gensoft-xz-5.2.4, gensoft-openbabel-3.1.1, gensoft-boost-1.72.0, gensoft-cuda-11.2, gensoft-adm-python-3.8.1, libgcc-s1, libc6, gensoft-icu-65.1, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libmolgrid-0.2.1_1.0_amd64.deb
Size: 38464864
MD5sum: 7e40a708b23d2512ad34bfdec480e458
SHA1: 44e8fae26d210b1dcde677a5f5e20e3b46ad2325
SHA256: 563ee17e689c91da79c90434fb0ec85940b021ac65de92d7497f0813d2efc2e2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This tool gets a CRISPR profile by identifying the presence of known spacers and direct repeats (DRs) in a given sequence based on a catalogue.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libmolgrid-0.5.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 185338
Depends: gensoft-zstd-1.4.4, libbz2-1.0, gensoft-adm-python-3.8.1, zlib1g, gensoft-cuda-11.7, libc6, gensoft-gcc-9.2.0, gensoft-xz-5.2.5, gensoft-openbabel-3.1.1, libgcc-s1, gensoft-icu-65.1, gensoft-boost-1.72.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libmolgrid-0.5.2_1.0_amd64.deb
Size: 46273436
MD5sum: e5836d7d1ddc805398bb4a232ea67d37
SHA1: d5ba3a0808bd85ee3d92341c8b5fe61d96422a1a
SHA256: 8d036261d2f360854d0a62b9c86bdb6e28de52b11fbf98c4c1dbce2752354e2c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: libmolgrid is a library to generate tensors from molecular data, with properties that make its output particularly suited to machine learning
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libmuscle-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 18772
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libmuscle-1.0.0_1.0_amd64.deb
Size: 5456950
MD5sum: 172812c7c558a8cea1542e314bf175c0
SHA1: 7fddd872f41e1fdd4f0ab31a78533abf462c4389
SHA256: 7bfe56058ea3256594af90b01df42329acceefb20ad6787592bab9d8e713f601
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a refactorization of the popular MUSCLE v3.6 alignment software into a development library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libneurosim-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 894
Depends: gensoft-gcc-9.2.0, libc6, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libneurosim-1.0.0_1.0_amd64.deb
Size: 229362
MD5sum: fbd4f4ba721a9613632d9bb0d79ecb25
SHA1: f596f7d4be930cfefb076eba5bf262425aeefef2
SHA256: 4b9481eefbc561c0c1a761badf6fe3e9d8b6be694c059ce88c2bd02c1b5040a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a general library that provides interfaces and common utility code for neuronal simulators
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libogg-1.3.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 588
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libogg-1.3.4_1.0_amd64.deb
Size: 271334
MD5sum: c7296aeba16c4e75faed8d8337b6ecf9
SHA1: 21275ca8fa8d116c00ea1fbb49b7c10d965f0e9b
SHA256: 9c0300cae6a373c00abe7cccedd7ab4e1c2947aee6582a8591575c7930df6ed2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Libogg contains necessary functionality to create, decode, and work with Ogg bitstreams
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libpng-1.6.37
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3566
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libpng-1.6.37_1.0_amd64.deb
Size: 1139752
MD5sum: b69476cd61cc6334ed7694798f8b7235
SHA1: 3aed61a298b8f6f1618feeebadb3b90265ef3039
SHA256: fea3deaaed98a046cc7d3a4fb1ae593fdd35562229010a62dd75be90a925f993
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: libpng is the official PNG reference library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-librsvg-2.50.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 323378
Depends: libfribidi0, gensoft-cairo-1.17.4, gensoft-xorg-libs-1.1, libc6, libgcc-s1, gensoft-expat-2.2.9, libmount1, libselinux1, gensoft-libiconv-1.16, zlib1g, gensoft-pixman-0.38.4, gensoft-xz-5.2.4, gensoft-libxml2-2.9.10, gensoft-gdk-pixbuf-2.42.2, gensoft-libffi-3.3, gensoft-pango-1.48.2, gensoft-pcre-8.43, libbz2-1.0, gensoft-freetype-2.10.1, gensoft-pcre2-10.34, libpcre2-8-0, gensoft-harfbuzz-2.6.7, gensoft-libpng-1.6.37, gensoft-glib-2.66.7, gensoft-fontconfig-2.13.91, libblkid1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-librsvg-2.50.3_1.0_amd64.deb
Size: 62551540
MD5sum: 4a7fbceed80cab0a2bd13376e3fa3b3e
SHA1: 26867b4b7b7d848f24a0243c275beb6fa24d8d52
SHA256: 51af6f099f9ba0aed6c26bcf013e048c2ff95970ab92baad044a9ea25e98a98e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This is librsvg - A small library to render Scalable Vector Graphics (SVG), associated with the GNOME Project.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libsigc++-2.10.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 16889
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libsigc++-2.10.4_1.0_amd64.deb
Size: 6110316
MD5sum: 086fff9266aeebfb706440b1c590a699
SHA1: 7a150af32554b052f71fede2141030d5708ca0fb
SHA256: 0d755528892a3281e5f51411a3845d49787c779e0ec58195629c0ef0edafe7cc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The libsigc++ package implements a typesafe callback system for standard C++.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libssh2-1.9.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3586
Depends: libssl1.1, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libssh2-1.9.0_1.0_amd64.deb
Size: 1132684
MD5sum: 8c36870ccec2d86d4fa9523b1fc1840b
SHA1: 8c5a743d97ae74a19b074b7bc442913584633435
SHA256: 788f6572a469afa635c05e630db376dd24dd62f08bb2d0983e00d4cffd834e6b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: the SSH library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libstatgen-1.0.15
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 3799
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libstatgen-1.0.15_1.0_amd64.deb
Size: 1150906
MD5sum: c2d8a71cf846ceb98ede143e3a1f2a43
SHA1: 2b7409143c0fcee803f44c0ac95e67d3f3db6d14
SHA256: 478ffba71b97d2e00eead36e2c63e103d0467e7cee57c6ddd5b611607f33bf95
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Useful set of classes for creating statistical genetic programs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libsvm-324
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7025
Depends: gensoft-gcc-9.2.0, gensoft-gnuplot-5.2.8, gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libsvm-324_1.0_amd64.deb
Size: 2179604
MD5sum: 877101a736df85594cbc60ca936c4d76
SHA1: 0b855dffc08ddec178231963799b5d50e4ed2720
SHA256: a67b5c30c3f966f993f032da80508c23f3d43c0f3045cb8547630cceb053a66d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Libsvm is a simple, easy-to-use, and efficient software for SVM classification and regression. It solves C-SVM classification, nu-SVM classification, one-class-SVM, epsilon-SVM regression, and nu-SVM regression. It also provides an automatic model selection tool for C-SVM classification.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libsvm-325
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Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 7036
Depends: libc6, gensoft-gnuplot-5.2.8, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libsvm-325_1.0_amd64.deb
Size: 2180600
MD5sum: 08e70f563c0cc79b1ca8715966a3b3ca
SHA1: 315e102daef90334bf134ea9278673d5e09faf7e
SHA256: 8eb8125021599c5640fd7b6feef58379290d4317dc58568f52b658dfde4fa71a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Libsvm is a simple, easy-to-use, and efficient software for SVM classification and regression. It solves C-SVM classification, nu-SVM classification, one-class-SVM, epsilon-SVM regression, and nu-SVM regression. It also provides an automatic model selection tool for C-SVM classification.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libsysconfcpu-0.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 56
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libsysconfcpu-0.5_1.0_amd64.deb
Size: 16606
MD5sum: 9bf4775ff4251228dd59a38fa1dbf898
SHA1: 089422a76078550192a625da40d202221371338d
SHA256: 8447c4b238fba1a5e663bcbb54c5630f613cff31575918bb1929b19f17a59f8e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: libsysconfcpus is an LD_PRELOAD library that intercepts calls to sysconf(), and adjusts the responses for _SC_NPROCESSORS_CONF and _SC_NPROCESSORS_ONLN, which are used to determine the number of processors available (either configured or online) at runtime in a system. Unfortunately, some closed- source software assumes that all of these processors may be used for computation, which is an assumption that is frequently not true on multiuser and HPC systems. Thus, libsysconfcpus provides a simple, non-intrusive way of adjusting the behaviour of such software (when it is dynamically linked).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libtiff-4.1.0
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8607
Depends: gensoft-xz-5.2.4, gensoft-libdrm-2.4.100, gensoft-gcc-9.2.0, gensoft-freeglut-3.2.1, libc6, gensoft-expat-2.2.9, gensoft-libjpeg-turbo-2.0.4, gensoft-glu-9.0.1, zlib1g, gensoft-mesa-19.0.8, gensoft-xorg-libs-1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libtiff-4.1.0_1.0_amd64.deb
Size: 2718980
MD5sum: cc7d1634dad42b7106623828c7793089
SHA1: f74d32c168a3f3bc3e214df04f3bee7bd0689dcd
SHA256: d6d25a90632cd72434efff3ff9310c040df212f95b14fa043aa7b72976641541
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libtool-2.4.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3670
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libtool-2.4.6_1.0_amd64.deb
Size: 906870
MD5sum: 164fbe99cfcd6684e9a709fae308bbca
SHA1: 64a5b5013a099ae68ed7f30f0039cd04e68fe4b5
SHA256: 6ae743a181e18a4c5a963240a6a763533697731bc5609094743b19febfd54fb8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GNU libtool is a generic library support script. Libtool hides the complexity of using shared libraries behind a consistent, portable interface.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libtree-2.0
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Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 2490
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libtree-2.0_1.0_amd64.deb
Size: 567202
MD5sum: 64d3cd7a69ba123ac4eafcbf1e79b787
SHA1: 3111f7705acc306fcdff56420c1ef4553e449547
SHA256: 08007d9dbc1de6a3af09ee5c7de7a7ccad47fdb15d9bca84f90bff2fcc77ecc3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ldd as a tree with an option to bundle dependencies into a single folder
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libunwind-1.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5578
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libunwind-1.3.1_1.0_amd64.deb
Size: 1501466
MD5sum: f9d75258bb5487447a02bd949311e9f5
SHA1: 134122d07e83c37985d0dd02952d0bfc67f9457f
SHA256: e250ff6603e0d40a08c4854f8936bc8c06d6934867067de604873a74c4ac04da
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a portable and efficient C programming interface (API) to determine the call-chain of a program. The API additionally provides the means to manipulate the preserved (callee-saved) state of each call-frame and to resume execution at any point in the call-chain (non-local goto).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libuuid-1.0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 157
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libuuid-1.0.3_1.0_amd64.deb
Size: 48346
MD5sum: c7b26e45a20553610fe4e41145b15b18
SHA1: 4759a17a8a79421d2608bc79917bf011ff14ffc4
SHA256: 16c68d2395553370610052c62411a2e3a3885b73cc545d7c1b914059c8f8c9c1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libvorbis-1.3.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2782
Depends: gensoft-libogg-1.3.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libvorbis-1.3.7_1.0_amd64.deb
Size: 720768
MD5sum: f7bcfb7d9d2faa548fd49c990e5ea0f7
SHA1: 2f0dcbb6cad9fd343ffbf77004a92d29fd70600a
SHA256: 13c38c257e9ca49fa8e603e1d5099c51f3badb017f008147fd29b4bfc7f47f9b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Libvorbis contains the Vorbis reference encoder and decoder.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libwebp-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25865
Depends: libc6, zlib1g, gensoft-libpng-1.6.37, gensoft-libdrm-2.4.100, gensoft-mesa-19.0.8, gensoft-xorg-libs-1.1, gensoft-freeglut-3.2.1, gensoft-libjpeg-turbo-2.0.4, gensoft-expat-2.2.9, gensoft-libtiff-4.1.0, gensoft-xz-5.2.4, gensoft-giflib-5.2.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libwebp-1.1.0_1.0_amd64.deb
Size: 6586958
MD5sum: 7feba70cebe66b4bde97cefd7f01e1f9
SHA1: 7dbd8d94cbda92ed49b2961a0de270bb7fab62e1
SHA256: 8b1314e7a12054ad62bfd316d6bdea346174f2de7b446e70557b25741539a5a5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: library to encode and decode images in WebP format. This package contains the library that can be used in other programs to add WebP support, as well as the command line tools cwebp and dwebp.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libxkbcommon-0.8.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3725
Depends: gensoft-xorg-libs-1.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libxkbcommon-0.8.4_1.0_amd64.deb
Size: 1178678
MD5sum: 4b6cff7e9fce7e78bd8032c3e82a5980
SHA1: fc4e3532511d94ca94637020cf378d4c8e13c888
SHA256: b8fb4cffc486f116da670a039e727728f3b087bb5f148dfc68c8b9eaada81647
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: xkbcommon is a library for handling of keyboard descriptions, including loading them from disk, parsing them and handling their state. Its mainly meant for client toolkits, window systems, and other system applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libxml++-2.42.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6125
Depends: libc6, gensoft-glib-2.58.3, zlib1g, gensoft-libffi-3.3, gensoft-libxml2-2.9.10, gensoft-glibmm-2.58.1, gensoft-gcc-9.2.0, gensoft-xz-5.2.4, gensoft-libiconv-1.16, gensoft-libsigc++-2.10.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libxml++-2.42.1_1.0_amd64.deb
Size: 1922440
MD5sum: bb001c64448210e35346c03f98bc4777
SHA1: fa038a1cbde955bbc42dc5bfbd70d9b64d742631
SHA256: 0f8a90c57ec9a2fda583ec57c9b79c20058d5c0772e40ac23149ce067e1012cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ wrapper for the libxml XML parser library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libxml++-2.6.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4483
Depends: gensoft-xz-5.2.4, zlib1g, gensoft-glib-2.58.3, gensoft-glibmm-2.58.1, gensoft-libxml2-2.9.10, libc6, gensoft-libiconv-1.16, gensoft-gcc-9.2.0, gensoft-libffi-3.3, gensoft-libsigc++-2.10.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libxml++-2.6.1_1.0_amd64.deb
Size: 1324406
MD5sum: 52317dac632994d44e409f9716d138a1
SHA1: b95114b82de20212dff082a0ad971b8267e5bca5
SHA256: fe6f6f997465494c3afdd92554c738a735d53af09483e9596b411bb92d5076ca
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ wrapper for the libxml XML parser library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libxml++-5.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4667
Depends: gensoft-libxml2-2.9.10, gensoft-libiconv-1.16, zlib1g, libc6, gensoft-gcc-9.2.0, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libxml++-5.0.0_1.0_amd64.deb
Size: 1599080
MD5sum: 0772456f8012b9ec0859727f7283ee30
SHA1: 959de34e5efcc599bb2c0b5a4b5f8b429c65f423
SHA256: 2f72190d3e533191ee9022647f2a63da477a63f9bf658bd6b86fe5df6000afbd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ wrapper for the libxml XML parser library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libxml2-2.6.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 16236
Depends: libreadline8, libtinfo5, libncurses5, zlib1g, libc6, gensoft-libiconv-1.16
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libxml2-2.6.9_1.0_amd64.deb
Size: 4454352
MD5sum: 35946b7da4433218697fd0b4e55d3b3f
SHA1: 3b12a4fefa9b5ab5d313f218b3c46bd9499844c2
SHA256: f3213e28eb3c512aa0407bda2eaf18d286c863f847954b827746510f47c6c5eb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Libxml2 is the XML C parser and toolkit developed for the Gnome project
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libxml2-2.9.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 28648
Depends: libc6, gensoft-xz-5.2.4, libncurses5, libreadline8, gensoft-libiconv-1.16, zlib1g, libtinfo5, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libxml2-2.9.10_1.0_amd64.deb
Size: 7275186
MD5sum: 8255d29433e060888979b80eb283c68d
SHA1: c90d470c3466a9684ed1e6c0efbac2bbc006fa1b
SHA256: 83a5bdd17cb5c271f9d613439de4e17ef166432873494b9fc3b822aac48eab1a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Libxml2 is the XML C parser and toolkit developed for the Gnome project
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libxslt-1.1.34
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7181
Depends: gensoft-xz-5.2.4, libc6, gensoft-adm-python-2.7.17, zlib1g, gensoft-libxml2-2.9.10, gensoft-libiconv-1.16
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libxslt-1.1.34_1.0_amd64.deb
Size: 2073250
MD5sum: fc160c908d26159cd0b0716df32cc0cb
SHA1: 0f7dd8e33fb8e721cd3968fa51b04790ae0ee058
SHA256: de27226539dbba28598c8a50a448526ebe7c826db3e5fdeb2a01771579c01815
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Libxslt is the XSLT C library developed for the GNOME project
License: unknown
Vendor: Institut Pasteur

Package: gensoft-libyaml-0.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2520
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-libyaml-0.2.2_1.0_amd64.deb
Size: 586748
MD5sum: 168ab72dfbe2fbcdbecc077fb3a2bc06
SHA1: 8d778c46b3e40537be3041e40ea9683c2ac24b20
SHA256: 1909536f68d7bf0cf027000aa12c6748a48d5531540e9519461c61ee30b92528
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LibYAML is a YAML 1.1 parser and emitter written in C.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lighter-1.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 89
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lighter-1.1.2_1.0_amd64.deb
Size: 44488
MD5sum: b1933722eb9df0b58138de8edc3158ca
SHA1: d763a89920e209cae21c3e397ec534b1116e1151
SHA256: 9a96f862dfe62f64097438f3a1a18472d7796c714064b564ecdd5592ec858ac6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Lighter is a kmer-based error correction method for whole genome sequencing data.  Lighter uses sampling (rather than counting) to obtain a set of kmers that are likely from the genome. Using this information, Lighter can correct the reads containing sequence errors.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-likelybin-0.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 919
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-likelybin-0.1.0_1.0_amd64.deb
Size: 303184
MD5sum: 35c1d8ae8d56de63762abaecad18c790
SHA1: dff9829e240edf2279814075d1d7537a260af50e
SHA256: 0b67de93f6d449170ea8587a1092a4723a2ab4f3003f747214289ae326f62df8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LikelyBin is an unsupervised metagenomic binner
License: unknown
Vendor: Institut Pasteur

Package: gensoft-likwid-5.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 16356
Depends: gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-likwid-5.0.2_1.0_amd64.deb
Size: 1626358
MD5sum: 807530a2003698d7d4ffa1652a2b6803
SHA1: 3c109547bff0c730249ae403d9aded34ebb08f7a
SHA256: aa741123540b4554bf7f354bafb58e5d859581d62ac4acae734a12e534302918
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: toolsuite of command line applications for performance oriented programmers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-likwid-5.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 19752
Depends: gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-likwid-5.2.0_1.0_amd64.deb
Size: 1784558
MD5sum: 0fe3d8c38483388a568a6d1e702ab3b0
SHA1: 486adcb651ac093b01122b91ad5a85145fd9db93
SHA256: d1bf0bbce7c2137b1be3644d9e9f43436f4cf9172fef8056bf82a7b4c00a55a4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: toolsuite of command line applications for performance oriented programmers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-likwid-5.2.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 20503
Depends: libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-likwid-5.2.1_1.0_amd64.deb
Size: 1805246
MD5sum: a94f9fff17719ebaade29d2e56bad178
SHA1: 9d7247402b94ed2577d8495a7f541f8e327bb9e6
SHA256: 59d459d3af92064160d3d006f64857a752a87abdf592176b91d195827660b870
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: toolsuite of command line applications for performance oriented programmers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lima-2.5.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 5555
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lima-2.5.0_1.0_amd64.deb
Size: 2439694
MD5sum: 26d3235d76036f3991cbb1ba40a19efc
SHA1: 6ae9479f5ad052ec844ef02939b4e189f2740d66
SHA256: 3c933169f866ac12ed1735e1c757ce3ffbfb1b7fc753002ca2131d6f0f65d248
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-llvm-10.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 852734
Depends: gensoft-libffi-3.2.1, gensoft-xz-5.2.4, gensoft-libiconv-1.16, libc6, gensoft-git-2.25.0, libtinfo6, gensoft-libxml2-2.9.10, gensoft-adm-python-2.7.17, gensoft-adm-perl-5.30.1, gensoft-z3-4.8.9, gensoft-gmp-6.2.0, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-llvm-10.0.0_1.0_amd64.deb
Size: 215493970
MD5sum: c91ff4fea9cc712f0964e4f7bd3a5a36
SHA1: d08d525ef9879167228ec82d90fa21c2e11f057d
SHA256: a985007f3dcbdd0be073a3b70c14fe472274f1401a92050e760410de9d3ec480
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The LLVM Project is a collection of modular and reusable compiler and toolchain technologies.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lofreq-2.1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 201790
Depends: gensoft-samtools-1.10, gensoft-xz-5.2.4, gensoft-curl-7.68.0, gensoft-adm-python-2.7.17, gensoft-htslib-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lofreq-2.1.4_1.0_amd64.deb
Size: 65563298
MD5sum: 638fe5e569440d4bdf12a8b37c8a9a9a
SHA1: 59d237cbabd053cbd0ba30539df132acadcfda0f
SHA256: 43019df8bec5b1b838a222c4aad5cdd8fb10d2965e5c4c90a6ad52734e40a599
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-loki-2.4.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3804
Depends: libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-loki-2.4.5_1.0_amd64.deb
Size: 1564060
MD5sum: b0e60de98bcf06a85a8de343ceaf36e4
SHA1: baf7186f14a2f727cd9fcb18e8fdbc0800eb6eac
SHA256: d44a8181dcb206055a1abcef1601b9fc00f0a661b9d6da47415f1f6ae16fe03e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Manipulation Environment for Genetic Analyses
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lordec-0.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 35104
Depends: zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lordec-0.9_1.0_amd64.deb
Size: 10046134
MD5sum: 4b774b7c2dea0f1e98aaef8ba84ab57b
SHA1: 6b4b67eef66f11e89c2c72dabb672e6e3594edf4
SHA256: e12577be42d5ba7f711ae2774d4013058ece5f12f973f2926669957b32f4e4b3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Program for correcting sequencing errors in PacBio reads using highly accurate short reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-louvain-0.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 189
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-louvain-0.3_1.0_amd64.deb
Size: 69940
MD5sum: 6d3edb7046cb61f9659c60ce20b24895
SHA1: b6167250ef655f731f2534bb01d535bd63447d0d
SHA256: 45685476e0ce851fbfca6ed55f32ad0135d23ad645bf24a04c58f21283046d79
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An implementation of the Louvain method for community detection in large graphs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lp-solve-5.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2022
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lp-solve-5.5_1.0_amd64.deb
Size: 810244
MD5sum: b79c055ec68ba4251a83f248eb6c8fdf
SHA1: f6932cce5a5cbc7c75fbefeab9fca70f6ec0d1bc
SHA256: 6fa313fc3ffdffa6c78aab51e2ae2267b141a10e4e88a5918fc4fd9b79777d5b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: lp_solve is a Mixed Integer Linear Programming (MILP) solver.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ls-bsr-1.03
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 96238
Depends: gensoft-cd-hit-4.8.1, gensoft-blat-36, gensoft-adm-python-2.7.17, gensoft-prodigal-2.6.3.pp1, gensoft-blast+-2.10.0, gensoft-vsearch-2.14.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ls-bsr-1.03_2.0_amd64.deb
Size: 25927486
MD5sum: caa7527478da598c7b9d6508e1fe2761
SHA1: 092474d38a83a137418b4536a2be0ebf197ad036
SHA256: e5eb60f3b3a2c116adba5203b9766f81a3045b25a42ae0980e14b1ab43c3555a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Large scale blast score ratio (LS-BSR). LS-BSR is a method to compare open reading frames betweeen a set of bacterial isolates.  The result of the script is a matrix that can be easily parsed to compare the genetic content between groups.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lsd2-1.9.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1438
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lsd2-1.9.7_1.0_amd64.deb
Size: 478024
MD5sum: 7d36a35d6082a38cf5894acc29965c1f
SHA1: 4fbb6adfa5d7851c3546c826b59b286e652270fc
SHA256: b8355b5a2c6dae0c9b6639623326abd67f5928efab28efff09ebc8ad3a74bfaf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LEAST-SQUARES METHODS TO ESTIMATE RATES AND DATES FROM PHYLOGENIES
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lsd2-2.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1467
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lsd2-2.3_1.0_amd64.deb
Size: 489086
MD5sum: 12929d8f0432b5f4291184d7aa27a737
SHA1: 4357e50705efdb7526c7ee60abd3b6c61d57c6b4
SHA256: 0d7c9a581017c28c149e5edaa6c95ca3a26fb32c09ae30c37da5fc77924b40bc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LEAST-SQUARES METHODS TO ESTIMATE RATES AND DATES FROM PHYLOGENIES
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ltr-retriever-2.9.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 56983
Depends: gensoft-blast-2.2.26, gensoft-cd-hit-4.8.1, gensoft-adm-perl-5.30.1, gensoft-blast+-2.10.0, gensoft-repeatmasker-4.1.0, gensoft-hmmer-3.2.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ltr-retriever-2.9.0_1.0_amd64.deb
Size: 28179770
MD5sum: 30018448a255268a361f460d04b3cc58
SHA1: edada4ce359c361ad30c83f80c8e3cec53dbcd4a
SHA256: bc716fc079d30df053b48511eb9e8f0293fabf5c01a370d14ea75f1ddefb30f3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons.The LTR Assembly Index (LAI) is also included in this package
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lua-5.1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1236
Depends: libtinfo5, libreadline8, libc6, libncurses5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lua-5.1.4_1.0_amd64.deb
Size: 461350
MD5sum: ddf93571aa6086d4790dff8e972e0d62
SHA1: 90f8e867c74d6d34793ad238222f5a5ebdc3b9c0
SHA256: d9282d8801759a1d911af5af6672297d53609e772f8e28c48cdfbcf66b4ebe4f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Lua is a powerful, fast, lightweight, embeddable scripting language. Lua combines simple procedural syntax with powerful data description constructs based on associative arrays and extensible semantics. Lua is dynamically typed, runs by interpreting bytecode for a register-based virtual machine, and has automatic memory management with incremental garbage collection, making it ideal for configuration, scripting, and rapid prototyping.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lua-5.3.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1547
Depends: libc6, libncurses5, libtinfo5, libreadline8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lua-5.3.5_1.0_amd64.deb
Size: 579854
MD5sum: 18811fa46af46151ec0fbbf31ecf7129
SHA1: 80d64970955210c1d849e37bf333d8903fcc9aef
SHA256: fb1a4dd5f2f55956a092a249bbd91222685b48668cc125c542374c69871d05d6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Lua is a powerful, fast, lightweight, embeddable scripting language. Lua combines simple procedural syntax with powerful data description constructs based on associative arrays and extensible semantics. Lua is dynamically typed, runs by interpreting bytecode for a register-based virtual machine, and has automatic memory management with incremental garbage collection, making it ideal for configuration, scripting, and rapid prototyping.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lumpy-sv-0.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 216337
Depends: gensoft-gcc-9.2.0, libssl1.1, gensoft-adm-python-2.7.17, gensoft-curl-7.68.0, libc6, gensoft-samtools-1.10, gensoft-htslib-1.10, libbz2-1.0, gensoft-xz-5.2.4, gensoft-adm-perl-5.30.1, gensoft-samblaster-v.0.1.24, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lumpy-sv-0.3.0_1.0_amd64.deb
Size: 64428444
MD5sum: 463c0c8f6814b3bc4db1d0ffbcfa8e02
SHA1: 76b5c854a17b0118fce9db221c8f4e581831a0b5
SHA256: b77696013e38656d105fdff45213de8a737b4709f8e1180552fddb6be1c123c5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A probabilistic framework for structural variant discovery.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lumpy-sv-0.3.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 226206
Depends: gensoft-samtools-1.10, libc6, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, libssl1.1, libstdc++, gensoft-xz-5.2.5, gensoft-htslib-1.10, gensoft-samblaster-v.0.1.24, gensoft-adm-python-2.7.17, bsdmainutils, libgcc-s1, zlib1g, gensoft-bamkit-0.0.1, gensoft-sambamba-0.7.1, gensoft-curl-7.68.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lumpy-sv-0.3.1_1.0_amd64.deb
Size: 67668630
MD5sum: 5f5b81c16c7ed9492bc220c4d2b33ab3
SHA1: 91fea428611fe6daa32a37ed556579d22ca82338
SHA256: 230c9b4b5bd090eca4a2fd1af4fc6365e7529c284fb836e4ba533e671e00e79d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A probabilistic framework for structural variant discovery.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lz4-1.9.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 848
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lz4-1.9.2_1.0_amd64.deb
Size: 355798
MD5sum: 6fbd70178df43615ceba694b9933dd19
SHA1: 60f5e9cda36cf6c748e95b8962edfcc1067e6389
SHA256: 17a3da911d36f8e99f3433a1900844726e727a4b03ccab41d924831cbabfda6d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LZ4 is lossless compression algorithm
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lzip-1.22
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 215
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lzip-1.22_1.0_amd64.deb
Size: 86986
MD5sum: aa3790818c2bcd59a8a79d846921f319
SHA1: 8f107c9245be6ba2fdb4746ba1d4edc34e4b1e47
SHA256: 5f82a57144317c0ebc984c60acbe8e12199ddc8e61c6c67f5eff21b0eaa085f8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a lossless data compressor with a user interface similar to the one of gzip or bzip2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lzlib-1.12
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 223
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lzlib-1.12_1.0_amd64.deb
Size: 88238
MD5sum: 5c410c73de3f4ccb8283c06e51fbf706
SHA1: e4d53db4bcb52d25e6df67f02528fee66f8805e9
SHA256: 6bad35a6fa82f5f1139cff267f421c4d2751ef7d6df02dec8c454a34ee0ddbff
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Lzlib is a data compression library providing in-memory LZMA compression and decompression functions, including integrity checking of the decompressed data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lzo-2.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2527
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lzo-2.10_1.0_amd64.deb
Size: 612994
MD5sum: ebc450fc62fb87fd04f889271186a619
SHA1: bbcbb84d0cbd33ac780c08d0dfdb0f3f502b7fa9
SHA256: 117dbcaa3b9a1f5d497af71c9806da0da674fb1e8d196b4fd16bb5b882e6ebe7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LZO is a portable lossless data compression library written in ANSI C.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-lzop-1.04
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 363
Depends: libc6, gensoft-lzo-2.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-lzop-1.04_1.0_amd64.deb
Size: 127712
MD5sum: 82537e7bc26c22a0f3fc75fa5f899c47
SHA1: b4888ae46410566c88945c0a0ad7fce9bc84f821
SHA256: 5abe5a8e0a91b1b719f1553b0114e8ccc5a985afff549c4cfada73227871cd4b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: lzop is a file compressor very similar to gzip.  lzop favors speed over compression ratio.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-m4-1.4.18
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1931
Depends: gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-m4-1.4.18_1.0_amd64.deb
Size: 536426
MD5sum: 024b3d9df49d0bd90e9ca02e97978353
SHA1: be49893d5f1d8218ce4abbc95fb7ff9b4fc26915
SHA256: 512f9805631bab21252f94371153d038c18e90acf48ec8b0edd544ebbe684050
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GNU M4 is an implementation of the traditional Unix macro processor. GNU M4 is a macro processor in the sense that it copies its input to the output expanding macros as it goes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mach-1.0.18
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 728
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mach-1.0.18_1.0_amd64.deb
Size: 321982
MD5sum: 101f372b97bd624a31b37c66b4567119
SHA1: a70d79c4dcc941e3a28d877b96b9021375f9f8cb
SHA256: dbcdc3f95854ec9fbd42cd2602013329e7cbd6444d186a042a28e1126d7536bc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A Markov Chain based haplotyper. It can resolve long haplotypes or infer missing genotypes in samples of unrelated individuals
License: unknown
Vendor: Institut Pasteur

Package: gensoft-macs-2.2.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 77295
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-macs-2.2.6_1.0_amd64.deb
Size: 23739102
MD5sum: 6a7a0e65f63fb8b6623e64cfd08f8b65
SHA1: 9f1b8c57efe1301defdd6dd8b71ed6b714d8ebc8
SHA256: 737e0d2e906c77ab7aac6954f6ec11f0c915a96d850ba9314b228d5cd27ffd22
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Model-based Analysis of ChIP-Seq
License: unknown
Vendor: Institut Pasteur

Package: gensoft-macsyfinder-1.0.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 92978
Depends: gensoft-blast+-2.2.31, gensoft-adm-python-2.7.17, gensoft-hmmer-3.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-macsyfinder-1.0.5_1.0_amd64.deb
Size: 18837934
MD5sum: 479f0b69728fd8c1336d0a24b7bdf83b
SHA1: b05183721280e5fc436c633ed359bdb487b8efc1
SHA256: e390e11d92ff4af3ed470cc9835284d009e4145c70a557b075735ac93368ccdc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Detection of macromolecular systems in protein datasets using systems modelling and similarity search.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-macsyfinder-2.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 199357
Depends: gensoft-hmmer-3.3.2, libstdc++6, libc6, gensoft-adm-python-3.10.7, zlib1g, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-macsyfinder-2.0_1.0_amd64.deb
Size: 75065028
MD5sum: fb53b3d5e765a2a66fc02825dce288a1
SHA1: b7f4e69fb4e2c3cdb84982285359133d19d6f3b6
SHA256: f0561a2322a0caf61aa38629cda769dc5915abafd9b14d079c26e5541612ecb5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Detection of macromolecular systems in protein datasets using systems modelling and similarity search.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-macsyfinder-2.1.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 207942
Depends: gensoft-adm-python-3.10.7, zlib1g, libgcc-s1, libstdc++6, libc6, gensoft-hmmer-3.3.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-macsyfinder-2.1.1_1.0_amd64.deb
Size: 77382956
MD5sum: 7862c867ba4ebde256d0a4c98f44199b
SHA1: 5c4e98d955f5583a45f47c29545e6774e8ba4d5f
SHA256: 52e32dd7d5b46e2d05337fa8c74c4f10fa9f7faf98047345d0f521ccdb10915f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Detection of macromolecular systems in protein datasets using systems modelling and similarity search.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-maeparser-1.2.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1818
Depends: gensoft-boost-1.72.0, gensoft-zstd-1.4.4, gensoft-xz-5.2.4, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-maeparser-1.2.4_1.0_amd64.deb
Size: 376692
MD5sum: f245b95e222138000be6b745ebffa1b3
SHA1: 2826ec19ac59637e61067d480a6a32afb76032fc
SHA256: 7ef82f3f2b0d526e36ade3343e151756e28f69a34c9edbc4c58af64d607a6746
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: maeparser is a parser for Schrodinger Maestro files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mafft-7.453
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14490
Depends: lynx, gensoft-fasta-3.8h, gensoft-ruby-2.7.0, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mafft-7.453_1.0_amd64.deb
Size: 6465428
MD5sum: 62b43769857b123a17f65453f6cb7632
SHA1: ac10dbcf56c9f4b0210016f758d8301d01c98156
SHA256: edf1a6eaaa673dd799c1c7a9ce723d9f06ced1fc5f6afe42c9190d4c05435375
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multiple alignment program for amino acid or nucleotide sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mafft-7.467
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 14542
Depends: libc6, gensoft-gcc-9.2.0, gensoft-fasta-3.8h, lynx, gensoft-ruby-2.7.0, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mafft-7.467_2.0_amd64.deb
Size: 6501806
MD5sum: 5562b59fcd950e337b48c2f6ab58a2a6
SHA1: bc7fa004ca2fd0e8ea0e92bd14eca3a3bb123349
SHA256: 1fa0daf06ba5e353c57532e3625621fdddf36f6169229d7e5c4710018491ca79
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multiple alignment program for amino acid or nucleotide sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mafft-7.505
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 15410
Depends: lynx, gensoft-gcc-9.2.0, gensoft-ruby-2.7.0, gensoft-adm-perl-5.30.1, libc6, gensoft-fasta-3.8h
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mafft-7.505_1.0_amd64.deb
Size: 6863590
MD5sum: 578337be351d2d193de23f74f8281aa8
SHA1: 0643eeb06efde5339a556ab47fe28c59d2009741
SHA256: e216f783ed7eb95b37b5601bc2cbd13e2d1508e9e71b5c2cad532d6bec701e9f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multiple alignment program for amino acid or nucleotide sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mageck-0.5.9.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 377358
Depends: gensoft-adm-python-2.7.17, gensoft-r-3.6.2, gensoft-gcc-9.2.0, gensoft-texinfo-6.7
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mageck-0.5.9.2_1.0_amd64.deb
Size: 118145632
MD5sum: aa488b763f96dd81919a3e87a6c8fad5
SHA1: dc1f847e77de174a465ca3582802c43a5f67ee61
SHA256: 6a2f212cf68ef584d3140caece51f6319009318a27c7c635f33947575ebebffe
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens (or GeCKO) technology.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-magicblast-1.5.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 27689
Depends: gensoft-gcc-9.2.0, libc6, gensoft-libiconv-1.16, libbz2-1.0, zlib1g, gensoft-xz-5.2.4, gensoft-libxml2-2.9.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-magicblast-1.5.0_1.0_amd64.deb
Size: 10784374
MD5sum: f1d6c71e69ae438057cc6b2362903e1b
SHA1: 23a796a1aeb8a6fbaf2429da9ddb0b9ad5b60c07
SHA256: 9aabc7d181f1bb273a9683988169980c74a27a7ab41148c5536451d60d41a649
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for mapping large next-generation RNA or DNA sequencing runs against a whole genome or transcriptome.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-magpurify-2.1.2
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 306333
Depends: libc6, gensoft-coverm-0.6.1, gensoft-adm-python-3.8.1, libstdc++6, gensoft-blast+-2.12.0, gensoft-hmmer-3.3.2, gensoft-last-1389, gensoft-prodigal-2.6.3.pp1, zlib1g, gensoft-mash-2.2, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-magpurify-2.1.2_2.0_amd64.deb
Size: 95622308
MD5sum: 58b3f59a836ff77068e4f79ae2410bd3
SHA1: 8b6e92f4bcc73bf75a0a606b0ec127d650b0588c
SHA256: b746e2c01fcd4081454c117fc893515d0aa6b17229ffa9dc9ee478ffa075d81d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Improvement of metagenome-assembled genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-makehub-1.0.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 97813
Depends: gensoft-ucsc-tools-v390, gensoft-adm-python-3.8.1, zlib1g, libc6, libgcc-s1, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-makehub-1.0.6_1.0_amd64.deb
Size: 33223692
MD5sum: e9cc8bc27e22a2bffefb642eb58d0652
SHA1: 3c5e72cd28af8eba7c6b02798f5c9fb8e7b6dde2
SHA256: 73f898198df03c92866e48d1261ddd907009dd107deccbe7f7575f5cf4359048
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a command line tool for the fully automatic generation of of track data hubs for visualizing genomes with the UCSC genome browser
License: unknown
Vendor: Institut Pasteur

Package: gensoft-maker-3.01.03
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 40736
Depends: gensoft-snap-2013-11-29, gensoft-genemark-4.30, gensoft-expat-2.2.9, gensoft-adm-perl-5.30.1, gensoft-hmmer-3.3, gensoft-exonerate-2.4.0, gensoft-trnascan-1.3.1, gensoft-trf-4.09, gensoft-libxml2-2.9.10, libssl1.1, gensoft-blast+-2.10.0, zlib1g, libc6, gensoft-repeatmasker-4.1.0, gensoft-libiconv-1.16, gensoft-openmpi-4.0.5, gensoft-augustus-3.3.3, gensoft-xz-5.2.4, gensoft-phrap-1.090518, gensoft-rmblastn-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-maker-3.01.03_1.0_amd64.deb
Size: 10528960
MD5sum: 6af7ab0ba46523bba3a44e98c6e261a7
SHA1: 4ff8baa119b97d282b41ea828ba9f460e753f8bb
SHA256: 55dadf1f0b7e4e6d95ca7d1cb78543bdd35c059192a4ccb4bfa3e1a8a0c2b51a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MAKER is a portable and easily configurable genome annotation pipeline. Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-malder-1.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 407
Depends: gensoft-blas-3.8.0, gensoft-lapack-3.9.0, gensoft-fftw-3.3.8, gensoft-gcc-9.2.0, gensoft-gsl-2.6, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-malder-1.0_1.0_amd64.deb
Size: 187716
MD5sum: 7392df6bbf9b9c0951c702329750881d
SHA1: 8ca383efe2af6654ea2a5005bec0ceb300547624
SHA256: a75f8c6378112397fd8e1074b306513e644335b465bbbcf80e53783577b3aed3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MALDER. This is a version of ALDER that has been modified to allow multiple admixture events.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-malt-0.4.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 30755
Depends: gensoft-java-1.8.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-malt-0.4.1_1.0_amd64.deb
Size: 29713052
MD5sum: e0f8896338072222e2067a8a8964a741
SHA1: 9d3accfbe8dd4f2eba14d63a08b8ee295bd62204
SHA256: 94742606bd3afb899dd2c6a4e2c911adce6fada0175694361b8e8de703141437
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MALT is a sequence aligner especially designed for metagenomics.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-malt-0.5.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 324251
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-malt-0.5.3_1.0_amd64.deb
Size: 155375572
MD5sum: 7592b55a72b8ac0c2fe1c9008e6eacdc
SHA1: a6ae85d05582c02c01bcc290cab5fa06796965f8
SHA256: bb0fc132a200153e9fb9ba1f7d8e7f6f744949796d228a20e7bf41912aa49e17
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MALT is a sequence aligner especially designed for metagenomics.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-manta-1.6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 464001
Depends: gensoft-adm-python-2.7.17, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-manta-1.6.0_1.0_amd64.deb
Size: 57161150
MD5sum: 54b32e9759ddf122380ce82b71e996e4
SHA1: 4b8ac90d1df04ec2e9be41be319e7f8f00b8bcce
SHA256: daf13d67b216a96cadb767fe4ba612222a3e3cb6e4cd533e485cd759dde4ea25
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Manta calls structural variants (SVs) and indels from mapped paired-end sequencing reads. It is optimized for analysis of germline variation in small sets of individuals and somatic variation in tumor/normal sample pairs. Manta discovers, assembles and scores large-scale SVs, medium-sized indels and large insertions within a single efficient workflow
License: unknown
Vendor: Institut Pasteur

Package: gensoft-map2cov-4.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6643
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-map2cov-4.6_1.0_amd64.deb
Size: 2014094
MD5sum: 569297cefec773fc55cb4da62748c7e8
SHA1: 58530f6b4dc6a708a4a9c606b5b35b62b3240320
SHA256: 0709d01c0ff9e4c69e65bd80348b4e2b769deb2c2ce5c98b52170d10421588cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Convert mapping data into coverage format readable by the COV2HTML interface
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mapdamage-2.2.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 124805
Depends: gensoft-adm-python-3.8.1, gensoft-r-4.2.1, zlib1g, libc6, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mapdamage-2.2.0_1.0_amd64.deb
Size: 48728782
MD5sum: 215fe5616a9a712df271dfb3226c8528
SHA1: 636b5c3fab59558a2a373b0d5da694153b3ea3fe
SHA256: c0385bd6dd76ec53ff23dfa55e930d04e8d1bf796adf0e5fbd66ec0e041e9fd1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tracks and quantifies DNA damage patterns among ancient DNA sequencing reads generated by Next-Generation Sequencing platforms.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-maq-0.7.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1769
Depends: gensoft-gnuplot-5.2.8, zlib1g, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-maq-0.7.1_1.0_amd64.deb
Size: 755416
MD5sum: 49fcf9d04a742701a09ecfa8d7b09fef
SHA1: 364b042c7ea2ba770befa7aad96cb08deaa2d8d5
SHA256: 0913ccb4478bd3a0dafb32417187e900c26be2570bbe5ac78b2145893a4b963e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Builds mapping assemblies from short reads generated by the next-generation sequencing machines
License: unknown
Vendor: Institut Pasteur

Package: gensoft-maqview-0.2.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1723
Depends: gensoft-glu-9.0.1, gensoft-libdrm-2.4.100, gensoft-freeglut-3.2.1, gensoft-xorg-libs-1.1, libc6, gensoft-mesa-19.0.8, gensoft-gcc-9.2.0, gensoft-expat-2.2.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-maqview-0.2.5_1.0_amd64.deb
Size: 654176
MD5sum: 34c99a4077170275fc5f2a38af08c141
SHA1: dfc5bf4d2477160ccdaf7dee2a309cc90fd1041c
SHA256: 47f7c7f07326913a04eb16e545a4bba19e87e56d54a7eaae477e580023a78312
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Maqview is graphical read alignment viewer. It is specifically designed for the Maq alignment file and allows you to see the mismatches, base qualities and mapping qualities. Maqview is nothing fancy as Consed or GAP, but just a simple viewer for you to see what happens in a particular region.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-martian-4.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 43174
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-martian-4.0.2_1.0_amd64.deb
Size: 22609842
MD5sum: 4b1392944c6a788b3ced237bd2903b00
SHA1: 0e880aab807b41b3ea1d4529ee2f20cced347a9b
SHA256: cda610837c38bf51dd5b9208ab8a5d0e6cf2f39e2de2d6ce0e795f95d6d7265d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Martian is a language and framework for developing and executing complex computational pipelines.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mash-2.2
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2508
Depends: gensoft-gsl-2.6, zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mash-2.2_2.0_amd64.deb
Size: 817226
MD5sum: eccbc2f040b958216e4560e83424a97f
SHA1: 6efe94518dc24f973b4a99dd1f84d600c34308bf
SHA256: e53ea8d881faeea475410e739080fef3625d9d2095fb6c934a946e7da5283570
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Mash is a fast sequence distance estimator that uses the MinHash algorithm and is designed to work with genomes and metagenomes in the form of assemblies or reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mash-2.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2898
Depends: libc6, zlib1g, gensoft-gsl-2.6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mash-2.3_1.0_amd64.deb
Size: 949908
MD5sum: 1b141d9fff8d033b4625d0a6441458c2
SHA1: 328e8eacebfef0e69e94994d1499ff4e4dd71efd
SHA256: e5957777cfaacaa9f1a86d818153f67240cb0253922d392f3c0dacdcdf88f8fc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Mash is a fast sequence distance estimator that uses the MinHash algorithm and is designed to work with genomes and metagenomes in the form of assemblies or reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-masurca-4.1.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 384953
Depends: libc6, gensoft-bwa-0.7.17, zlib1g, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, libbz2-1.0, csh
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-masurca-4.1.0_1.0_amd64.deb
Size: 128241312
MD5sum: 7c1817022869247d0e03d76b53c4c7ef
SHA1: bd9a12f100809dd5b56c53485ead4a28df8972fd
SHA256: 94941806194a7500683ba8e5fb36a28fca62d46f9cd07c92eddc7374e73b7ad0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Whole genome assembly software. MaSuRCA can assemble data sets containing only short reads from Illumina sequencing or a mixture of short reads and long reads (Sanger, 454).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mauve-2.4.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7645
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mauve-2.4.0_1.0_amd64.deb
Size: 6485808
MD5sum: 169c548893b0123e98d54f348f75073c
SHA1: aff587a914d6d66b6277774c0dac953e67054b46
SHA256: cc57066cd3522db3ae440e92233f2fb4c936ae3eabbec0adc7825465fe0588ba
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: System for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mauvealigner-r4736
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 53590
Depends: gensoft-xz-5.2.4, libc6, gensoft-boost-1.72.0, gensoft-zstd-1.4.4, gensoft-gcc-9.2.0, libbz2-1.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mauvealigner-r4736_1.0_amd64.deb
Size: 12627228
MD5sum: bb0faaf96636f56ffbdb639fc40d4122
SHA1: 708c195a88db7803c064bdd62d9017487240fd84
SHA256: 29c0bed7021195407a57931ad61b7d6248ab2d87edc616cfef8ae4aed5a41ca8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: mauveAligner and progressiveMauve alignment algorithms have implemented as command-line programs that provide options not yet available in the graphical interface.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mawk-1.3.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 694
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mawk-1.3.4_1.0_amd64.deb
Size: 269270
MD5sum: 970a7a9235547203a0309cd2edf874a0
SHA1: 08abaa5ba440ba2d9acd61416bb6ddf4457ce03b
SHA256: f365fbc879fffe25901c980adb7b2eb86df77fd304bfbad45ed2c941b72cc809
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an interpreter for the AWK Programming Language.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-maxbin-2.2.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 21590
Depends: gensoft-hmmer-3.3, gensoft-gcc-9.2.0, gensoft-idba-1.1.3, libc6, gensoft-bowtie2-2.3.5.1, gensoft-adm-perl-5.30.1, gensoft-fraggenescan-1.31
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-maxbin-2.2.7_1.0_amd64.deb
Size: 4380396
MD5sum: 2aa46fc1bb57e0391b700152b51c309a
SHA1: 46df2eb95fa9ff81b12e73fc3a4852b4ebc137a2
SHA256: 76f02e60824e2f985ca93f2bbfd3b0601be428f22cd0caaa49ddce6941fb0536
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MaxBin is software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm. Users can understand the underlying bins (genomes) of the microbes in their metagenomes by simply providing assembled metagenomic sequences and the reads coverage information or sequencing reads. For users convenience MaxBin will report genome-related statistics, including estimated completeness, GC content and genome size in the binning summary page.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mbmdr-4.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14620
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mbmdr-4.4.1_1.0_amd64.deb
Size: 4851372
MD5sum: 1cd9acdae4805ca4de4a8b342be1d184
SHA1: a3439e2c2a28b29ca2b6ef60d1337abf81a8fad5
SHA256: ecc747591d1cf104fd0ea0887765b0ac03262e6ce34adbf2affba6424f086ef6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A software that is able to detect multiple sets of significant gene-gene and/or gene-environment interactions in relation to a trait of interest. The trait can either be expressed on a binary scale, or on a continuous scale.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mbuffer-20191016
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 280
Depends: zlib1g, libssl1.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mbuffer-20191016_1.0_amd64.deb
Size: 118648
MD5sum: efedb8f7187248b99377df158c28107d
SHA1: f28426b507078f2b433466ebe9f507efabb44b62
SHA256: 1d4bcee1e75027b6c5aab834a95480a1deb80beaf1afb996f1aca496650534ba
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: mbuffer is a tool for buffering data streams with a large set of unique features
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mcell-3.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 744
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mcell-3.4_1.0_amd64.deb
Size: 329042
MD5sum: b3436451f4974111d47be71ed2c1488e
SHA1: a7541ec87f270fc8c77082723905dabfd850aeb0
SHA256: a3e61a66e0375b51919f41f061e59813cb04a10dcf1e15a649c07967c86d8963
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MCell is a program that uses spatially realistic 3D cellular models and specialized Monte Carlo algorithms to simulate the movements and reactions of molecules within and between cells-cellular microphysiology.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mcl-14-137
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20473
Depends: gensoft-r-3.6.2, gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mcl-14-137_1.0_amd64.deb
Size: 7725356
MD5sum: a5f57d149e8f6c17ff5803b8e0a6cf4c
SHA1: 9c7fcccdef65b3335ef813976aebd3c880859da6
SHA256: f60dbcf004e1ced63d0c813d289584ad94f9ce9d2f776ee3d6ccde56ecb9e22d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Cluster algorithm for graphs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mdmcleaner-0.8.3
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 152018
Depends: libgcc-s1, gensoft-adm-python-3.8.1, gensoft-aragorn-1.2.38, zlib1g, gensoft-barrnap-0.9, wget, gensoft-prodigal-2.6.3.pp1, gensoft-blast+-2.12.0, gensoft-diamond-2.0.14, libc6, gensoft-hmmer-3.3.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mdmcleaner-0.8.3_2.0_amd64.deb
Size: 38765868
MD5sum: 1bebcc3cbcdbd7b0b064e29507c34f67
SHA1: 8b7f8b564ffff18776f4d132b98805ab9b43d472
SHA256: 9364a6a18e465a76aa4dc9bcd340b8e77461169a29f2596361a167f314025c0d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mecat2-20190314
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2531
Depends: gensoft-zlib-1.2.11, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, libc6, gensoft-hdf5-1.10.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mecat2-20190314_1.0_amd64.deb
Size: 1023694
MD5sum: ed2cc73a492c6a3f31d9023509bbc2b4
SHA1: 15667d1dc33d2bf4992aa647ee5631e86ca2fc67
SHA256: 71c01d03d023ff09e5a1764202b74a26b641168b9cfd8c65952f3fcbf8310730
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an ultra-fast and accurate Mapping, Error Correction and de novo Assembly Tools for single molecula sequencing (SMRT) reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-medaka-1.4.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3395131
Depends: gensoft-samtools-1.13, libstdc++6, gensoft-xz-5.2.4, libgcc-s1, gensoft-htslib-1.13, gensoft-adm-python-3.8.1, libbz2-1.0, gensoft-minimap2-2.17, zlib1g, libc6, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-medaka-1.4.4_1.0_amd64.deb
Size: 1170053442
MD5sum: 0ebbc96c91e5c1f106e00cffba38c38b
SHA1: a7df7aade11e7b70284d3bca2c01b2d5ee079894
SHA256: 889b95f77df30243a31db36683de8cf1f6be0e8b5470bc1191ac008b95095c65
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: medaka is a tool to create consensus sequences and variant calls from nanopore sequencing data. This task is performed using neural networks applied a pileup of individual sequencing reads against a draft assembly. It outperforms graph-based methods operating on basecalled data, and can be competitive with state-of-the-art signal-based methods whilst being much faster.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-megahit-1.2.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20344
Depends: gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, bzip2, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-megahit-1.2.9_1.0_amd64.deb
Size: 4107044
MD5sum: 2cd018a21ddf29e092c6e6a4f16626f9
SHA1: 025b74308ee611a5e919430534fd27758666b1b9
SHA256: c273760b03579e6e88bd53c036594fe2e95c42325d3a98c975ed8152b99c4f18
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MEGAHIT is a single node assembler for large and complex metagenomics NGS reads, such as soil. It makes use of succinct de Bruijn graph (SdBG) to achieve low memory assembly.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-melting-5.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3670
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-melting-5.2.0_1.0_amd64.deb
Size: 2641326
MD5sum: 428ef7a3f84efcb570d041ba685b31ad
SHA1: 6a32b21d81586039380d631fc7bf6c9b5982b302
SHA256: 00ed0fcf76136bd680639ebc83c5840a33a6a111ab8edd45c45a281d4033ddfe
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Melting computes, for a nucleic acid duplex, the enthalpy, the entropy and the melting temperature of the helix-coil transitions
License: unknown
Vendor: Institut Pasteur

Package: gensoft-meme-4.11.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 81668
Depends: gensoft-expat-2.2.9, gensoft-adm-perl-5.30.1, zlib1g, libc6, gensoft-openmpi-4.0.5, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-meme-4.11.2_1.0_amd64.deb
Size: 31191192
MD5sum: 6e41080b1dbca1a3fa0e02d596123890
SHA1: 905457247182a22d855e619395474f8bfb09e7fb
SHA256: e7d0d7062d8b3a521dcc9d6da6a902c0b90e46018be5725348b7b79747e87497
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Motif-based sequence analysis tools
License: unknown
Vendor: Institut Pasteur

Package: gensoft-meme-5.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 116070
Depends: zlib1g, libc6, gensoft-expat-2.2.9, gensoft-adm-perl-5.30.1, gensoft-adm-python-2.7.17, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-meme-5.1.1_1.0_amd64.deb
Size: 42420162
MD5sum: ced38a4ae7b35b8ebc2de33a85436b04
SHA1: ce669c88e241d27b763b39e38b8239f14ff97b87
SHA256: c039940ad86ec0ecda33ad3bd8d37be5b305b61badb6725596407260eabfa8de
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Motif-based sequence analysis tools
License: unknown
Vendor: Institut Pasteur

Package: gensoft-merlin-1.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4906
Depends: zlib1g, gensoft-pedstats-0.6.12, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-merlin-1.1.2_1.0_amd64.deb
Size: 2177152
MD5sum: ad884698bfb90d12ad052d971db6f932
SHA1: f44670ce12822316f803151be883417245adc3b0
SHA256: c1936889e519dfd53f541a5ca68c6b1ed93c2b1da9b406be0ae1414a4a66778e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Uses sparse trees to represent gene flow in pedigrees
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mesa-19.0.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1001017
Depends: zlib1g, libc6, gensoft-libdrm-2.4.100, gensoft-xorg-libs-1.1, gensoft-gcc-9.2.0, gensoft-expat-2.2.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mesa-19.0.8_1.0_amd64.deb
Size: 94666274
MD5sum: f00528f3d8ee60250fc6a6792ad7f99e
SHA1: 887eefd34e006895bceb33e2b1af40c82919dbe8
SHA256: 03b392b6c7fe712610e1246e3c303896a4d9daf0d35aa1d227f0b77f9115fa10
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: LIBDRM is the cross-driver middleware which allows user-space applications (such as Mesa and 2D drivers) to communicate with the Kernel by the means of the DRI protocol
License: unknown
Vendor: Institut Pasteur

Package: gensoft-meshclust-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 34211
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-meshclust-1.0.0_1.0_amd64.deb
Size: 8728338
MD5sum: 9ff89c35b129467ee923a990e817d1d4
SHA1: f79102d2a0f8ad056c6b86b1b1ad523986e8c5b6
SHA256: 73d05417700b7c9abdc8db9d6c1eff055fff573a8d1e422091b653a6a367a8d4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an intelligent tool for clustering DNA sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-meson-0.53.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3974
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-meson-0.53.1_1.0_amd64.deb
Size: 1199920
MD5sum: 599d25a2b8fddf9ebd0b49d0d88050c2
SHA1: cfe84e61aa85825961a88c64178334b735a41a14
SHA256: 1e5601b0242486cf78e37fead328ecde30de614ed87bacc4543062da7a7e8b1b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Meson is an open source build system meant to be both extremely fast, and, even more importantly, as user friendly as possible.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-meson-0.57.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4888
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-meson-0.57.0_1.0_amd64.deb
Size: 1465048
MD5sum: 7ec87da2011a4614ab0b7aa1c6c25bbb
SHA1: 787531a5fc2e6c50b930b4f4bc98e96d7a74a5b9
SHA256: 4283ba79b74b3e651abc7d2b0e607d3ae9e6a990b03e0c48a63f9ba23fc1a4b4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Meson is an open source build system meant to be both extremely fast, and, even more importantly, as user friendly as possible.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metabat-2.15
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2494
Depends: gensoft-htslib-1.10, libbz2-1.0, libssl1.1, gensoft-curl-7.68.0, libc6, gensoft-gcc-9.2.0, gensoft-zlib-1.2.11, gensoft-adm-perl-5.30.1, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metabat-2.15_1.0_amd64.deb
Size: 844342
MD5sum: cc833b56a80899dccbef574a43681985
SHA1: e4d92c1f064653d5d7d6fa8e3315d5aa4a0c0891
SHA256: 79fd00c1a83d451e5c90fcdafb56e7c33cc52c7276eebfb744dd8fd6a4ec19bb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metacluster-5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3755
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metacluster-5.1_1.0_amd64.deb
Size: 1189726
MD5sum: ea92ef0a85712245a0119b930c1588de
SHA1: aae9e5e76fafb092dc80b471631532fa5a21e983
SHA256: 787f6217a796b23d0e6c084487bb8d05312d4f628877d906abf5d20c2c55a9d2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: software for binning short pair-end reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metaeuk-6-a5d39d9
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 13672
Depends: gensoft-gcc-9.2.0, libbz2-1.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metaeuk-6-a5d39d9_1.0_amd64.deb
Size: 5162240
MD5sum: 3b010cdda1ae765f907965ed84f6690f
SHA1: cb6c09296d338a389b47ef791377f5529cdaeadb
SHA256: 0d4346863e55cd2e4e52f90916fef20759deb24a830453520f78659f9f324531
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metagen-1.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 41189
Depends: gensoft-r-3.6.2, gensoft-bowtie2-2.3.5.1, bsdmainutils, libc6, gensoft-gcc-9.2.0, zlib1g, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metagen-1.2.0_1.0_amd64.deb
Size: 21992966
MD5sum: c4ae5270b428019e416ca2785e39060d
SHA1: 8e47b0a3c02d08c3d025f62286b7a4892464f9f4
SHA256: 1abb01a489223a7f0d35c9070c7e430e4348df2863e5894ef59c9e23733e0b13
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a statistically based algorithm to simultaneously identify micro- bial species and estimate their abundances in multiple metagenomic samples without using any reference genome.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metageneannotator-2008-8-19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2145
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metageneannotator-2008-8-19_1.0_amd64.deb
Size: 824738
MD5sum: 925a723b6ad316ca22ef788e3fc29fec
SHA1: f4e58c180fb278e03cedb0e99fd5d30d009dd990
SHA256: 8221e7b38df490b90e9a4ba4b7ef8d20121fa74089e428d20394c796119f52a8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MetaGeneAnnotator is a gene-finding program for prokaryote and phage.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metagraph-0.3.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 142520
Depends: gensoft-xz-5.2.5, libbz2-1.0, zlib1g, gensoft-jemalloc-5.2.1, gensoft-htslib-1.13, libssl1.1, libc6, gensoft-curl-7.68.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metagraph-0.3.5_1.0_amd64.deb
Size: 32158426
MD5sum: 331a5f07877a311b94f28497548c4830
SHA1: 2d7fb448b1bf374f19e3b7f3e65e285592ce3f85
SHA256: e749dfcbc6416f1e1d93a5910b805ec1e6e9653ce95d5248e7710e328e9240a3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metaphlan-2.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1548756
Depends: gensoft-adm-python-2.7.17, gensoft-bowtie2-2.1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metaphlan-2.0_1.0_amd64.deb
Size: 1148793466
MD5sum: 70d83eeb03b08e070d8d3138c7238f41
SHA1: 05ebb63e24bfb97eb9134b5989415f680fcf55dc
SHA256: 69c0eede1ae1cc13197de1e9cf1984d13c14d1ad34cb0f927ef8d8f7b118a0fc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metaphlan-3.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 486824
Depends: gensoft-bowtie2-2.1.0, gensoft-mafft-7.453, gensoft-adm-python-3.8.1, gensoft-raxml-8.2.12, gensoft-samtools-1.10, libc6, zlib1g, libstdc++6, gensoft-blast+-2.10.0, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metaphlan-3.0_1.0_amd64.deb
Size: 149172622
MD5sum: 777fe0659a3209dede1368723e6f0ea6
SHA1: f809369f52bfede165fa9aba1cf9a902e47c35ef
SHA256: 9f6970711f7a0e62aecb911b8acdb43c45806c1c94420363ae573423a4d4c58a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metaphlan-3.0.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 404204
Depends: gensoft-bowtie2-2.3.5.1, gensoft-gcc-9.2.0, libc6, gensoft-raxml-8.2.12, gensoft-graphlan-1.1.3, gensoft-samtools-1.10, gensoft-r-4.0.2, gensoft-blast+-2.10.1, gensoft-muscle-3.8.1551, gensoft-adm-python-3.8.1, gensoft-phylophlan-3.0.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metaphlan-3.0.10_1.0_amd64.deb
Size: 123595366
MD5sum: 4f0ebdac0243a334df35186e2a8a82b7
SHA1: 89fd8aef8e3e43c7eb28623a78ef81604612bafb
SHA256: 2c8d3c91e09cde17e0bc5ab68b2c1b79359f992fdcf9a3abd31c67ff43ac2e0e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metaphlan-4.0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 902462
Depends: gensoft-samtools-1.10, libc6, libgcc-s1, libstdc++6, gensoft-curl-7.68.0, gensoft-raxml-8.2.12, gensoft-expat-2.4.1, gensoft-bowtie2-2.3.5.1, gensoft-graphlan-1.1.3, libgmp10, gensoft-r-4.1.0, gensoft-blast+-2.10.1, libssl1.1, gensoft-phylophlan-3.0.2, gensoft-libpng-1.6.37, gensoft-adm-python-3.8.1, gensoft-fontconfig-2.13.91, gensoft-xorg-libs-1.1, gensoft-pixman-0.38.4, zlib1g, gensoft-muscle-3.8.1551, gensoft-gcc-9.2.0, gensoft-freetype-2.10.1, libbz2-1.0, gensoft-cairo-1.16.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metaphlan-4.0.1_1.0_amd64.deb
Size: 342524254
MD5sum: 69a3fe24a276d6a58265a11ad968b69f
SHA1: d63f999ba5db94641880f9cc983abcb8495ca98a
SHA256: cb655b361c110295c0948435b92c084dc8de702471334a84ebd8f1c191c9fcae
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metator-1.1.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 521914
Depends: gensoft-networkanalysis-2.0.2, gensoft-pyfastx-0.8.4, gensoft-checkm-1.1.3, libstdc++6, libgcc-s1, zlib1g, gensoft-louvain-0.3, gensoft-bowtie2-2.3.5.1, gensoft-adm-python-3.8.1, gensoft-samtools-1.13, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metator-1.1.4_1.0_amd64.deb
Size: 162187270
MD5sum: dbd2e9aaa23daaa9bc772ea49f13d516
SHA1: 31bd8c5f5c7f8da5c5b79dad557f09a255d593a4
SHA256: 29bb35a71c4643db6e1d3bf0e9fd57a9cdbca01480375c57dcd85eb48d57c1ce
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Metagenomic Tridimensional Organisation-based Reassembly - A set of scripts that streamlines the processing and binning of metagenomic metaHiC datasets
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metavelvet-1.2.02
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 488
Depends: zlib1g, gensoft-gcc-9.2.0, libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metavelvet-1.2.02_1.0_amd64.deb
Size: 195222
MD5sum: f8c9c33b630238a713ec611bf4a94677
SHA1: 60d4e932fa0e7c190097e20aadbd76dc14310d19
SHA256: e6f4cf7b4a293fe02492fe921cc8119b504672c8b06996a525ea7920c187a4d9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Velvet software for Metagenome assembly pipeline
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metawrap-1.3.2
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Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 333729
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metawrap-1.3.2_1.0_amd64.deb
Size: 114386288
MD5sum: 72bb3d3b002bc9a9f1ade18333236aa8
SHA1: e8d0f551c166685e13d23c858114b4e42a88d3e9
SHA256: 6bbc3596830818e7b0f84998941caa61270f2954be4b36aa5fc136d4aa182cc8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a flexible pipeline for genome-resolved metagenomic data analysis
License: unknown
Vendor: Institut Pasteur

Package: gensoft-metis-5.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1090
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-metis-5.1.0_1.0_amd64.deb
Size: 641728
MD5sum: 3ae5530a6cf9661aab39fca7abb90fcd
SHA1: bc06f343e6ee898a653aa10a0245fb5d398c5b41
SHA256: 97f081684ce87dd7f0f156908c7cec56069beaa3e13e10e7ffe324ca47882bc1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: METIS is a set of serial programs for partitioning graphs, partitioning finite element meshes, and producing fill reducing orderings for sparse matrices. The algorithms implemented in METIS are based on the multilevel recursive-bisection, multilevel k-way, and multi-constraint partitioning schemes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mfold-3.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4272
Depends: gensoft-libtiff-4.1.0, gensoft-ghostscript-9.50, gensoft-gcc-9.2.0, gensoft-freetype-2.10.1, gensoft-fontconfig-2.13.91, gensoft-xorg-libs-1.1, gensoft-libpng-1.6.37, gensoft-xz-5.2.4, gensoft-libjpeg-turbo-2.0.4, gensoft-libgd-gd-2.2.5, gensoft-expat-2.2.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mfold-3.6_1.0_amd64.deb
Size: 1298034
MD5sum: dc76907c894c41ee6cccbd600690ba95
SHA1: 4e9aded9e5c7894db8356c5a39ca6a633437305c
SHA256: e955e62708b756a6cd2d8fee7f2d380d360416d37c85ee0fcb6bc4b55146a64b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RNA and DNA secondary structure prediction using nearest neighbor thermodynamic rules
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mfold-util-4.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3508
Depends: gensoft-libdrm-2.4.100, gensoft-freetype-2.10.1, gensoft-ghostscript-9.50, gensoft-xz-5.2.4, libc6, gensoft-fontconfig-2.13.91, gensoft-libtiff-4.1.0, gensoft-expat-2.2.9, libbz2-1.0, gensoft-libgd-gd-2.2.5, gensoft-freeglut-3.2.1, gensoft-gcc-9.2.0, gensoft-mesa-19.0.8, gensoft-glu-9.0.1, gensoft-libpng-1.6.37, zlib1g, gensoft-xorg-libs-1.1, gensoft-libjpeg-turbo-2.0.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mfold-util-4.6_1.0_amd64.deb
Size: 1358946
MD5sum: 89e4bc1a3984c47e833816c93bf25716
SHA1: d3d33c60eb25054a00398c058d681760a18de772
SHA256: 8b76c1b488ace22d14a7302c3f3550dfddf25bf2d583f09d9e7344b9a116bcf2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Small utilities needed by MFOLD program.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mgems-1.3.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 721
Depends: gensoft-bzip2-1.0.6, libc6, gensoft-gcc-9.2.0, gensoft-xz-5.2.5, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mgems-1.3.1_1.0_amd64.deb
Size: 271824
MD5sum: 7831809c82f7a7fc262f69ad37a420ce
SHA1: 8b00350ff75bbe944a84ec095589da5b4f45f290
SHA256: a4303b00f02478d3d496517bfe2388803c3c576b7512a0ff632c0296700f4bac
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bacterial sequencing data binning on strain-level based on probabilistic taxonomic classification.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mgs-canopy-d55ed1a8b825
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 586
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mgs-canopy-d55ed1a8b825_1.0_amd64.deb
Size: 195266
MD5sum: 47c3cc590ca89e034b2242fcf6af2c2f
SHA1: 0589436c2d06a7ca70fe25b42856873a696974df
SHA256: 3420ce5e428ebe3e0c6c7d6949d482a7d5d24fc744279ee8274eef43c6987506
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: mgs-canopy is our variation of canopy clustering focuses on efficient clustering of points in multi-dimensional pearson correlation space
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mhap-2.1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 821
Depends: gensoft-ssw-1.1, gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mhap-2.1.3_1.0_amd64.deb
Size: 750940
MD5sum: a07f8c944b1f6f5a1e2d6ae8a7c9c6d6
SHA1: f89828ec2813e37f16376252922736f3a3d10e03
SHA256: 67d5bb7c32da68a5f7f016b5e4e6fa9e0bcb60a2929155eb0cdc4da84315f2f9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MinHash alignment process (MHAP pronounced MAP) locality sensitive hashing to detect overlaps and utilities.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mhc-i-3.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1029069
Depends: gensoft-adm-python-3.8.1, libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mhc-i-3.1.1_1.0_amd64.deb
Size: 363139090
MD5sum: 95e639f6226de52ed044f4fad5bfbbad
SHA1: a50998f3179786436e5b40d68fa7e2056fa769a6
SHA256: 06139457059d91dcffab3e5903445c09a2b5e278144be48185ba42e00590ed4b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a collection of prediction tools for peptides binding to Major Histocompatibility Complex (MHC) class I molecules.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-micca-1.7.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 877940
Depends: gensoft-muscle-3.8.1551, libbz2-1.0, gensoft-swarm-3.0.0, gensoft-graalvm-ce-java8-20.0.0, gensoft-vsearch-2.7.1, gensoft-adm-python-2.7.17, gensoft-cutadapt-2.10, libc6, gensoft-fasttree-2.1.11, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-micca-1.7.2_1.0_amd64.deb
Size: 261852202
MD5sum: 8c46c07984820dc0c514ef4ef7d128f7
SHA1: ec81c114cedcb186c9451843bd0d74a4d71f3b73
SHA256: b5b52e7a10ab8c02dbc0d99c4966ac5f39da5d334a0e872bee5e3b264f4e8da7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: micca is an open-source, command-line software for the processing of amplicon sequencing data, from raw sequences to OTU tables, taxonomic classification and phylogenetic tree inference. The pipeline can be applied to a range of highly conserved genes/spacers, such as 16S rRNA gene and Internal Transcribed Spacer (ITS).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-microbiomeutil-r20110519
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 160446
Depends: gensoft-blast-2.2.26, gensoft-expat-2.2.9, gensoft-freetype-2.10.1, gensoft-libgd-gd-2.2.5, gensoft-adm-perl-5.30.1, gensoft-xz-5.2.4, zlib1g, gensoft-libtiff-4.1.0, libbz2-1.0, gensoft-xorg-libs-1.1, gensoft-fontconfig-2.13.91, gensoft-libjpeg-turbo-2.0.4, gensoft-libpng-1.6.37, libc6, gensoft-cdbfasta-0.99
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-microbiomeutil-r20110519_1.0_amd64.deb
Size: 116498516
MD5sum: 529eb67b047429ed38d9551d4a26f557
SHA1: eab7f0595897c55602593c40c00f542b47d9e956
SHA256: 32fddf54a396e1eab71ca3d1faa87d24e1438dc9f44a9c4af5cb8cfb43ee8a7b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A set of software utilities for processing and analyzing 16S rRNA genes including generating NAST alignments, chimera checking, and assembling paired 16S rRNA reads according to reference sequence homology.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-micropita-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 295919
Depends: libstdc++6, libc6, libbz2-1.0, libgcc-s1, zlib1g, gensoft-gsl-2.6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-micropita-1.1.0_1.0_amd64.deb
Size: 88891334
MD5sum: d0649b1fb7052f76e4be8426ae12a986
SHA1: 5ff76e3db6f0231528a4aa55414e1e655d946cd0
SHA256: 44a531924e8cbe0755ab51fd63acd0752eae903678b986fec1bfd2b91ef3ec8c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: microbiomes - Picking Interesting Taxonomic Abundance. is a computational tool enabling sample selection in two-stage (tiered) studies. Using two-stage designs can more efficiently allocate resources, reducing study costs, and maximizing the use of samples.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-micsa-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 715
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-meme-5.1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-micsa-1.0_1.0_amd64.deb
Size: 668648
MD5sum: c8f538d186d64620d3a12c86f3e59687
SHA1: 59314fc7af231ead9db2f4c16799067f2773fb11
SHA256: d89c1f50fe8845211854ed555474104413bfb6145f91d8e4c330014081f6bf95
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Identification of transcription factor binding sites in ChIP-Seq data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-minced-0.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 29
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-minced-0.4.2_1.0_amd64.deb
Size: 29376
MD5sum: 338aa2b842a27dc3ebf75d164df5f731
SHA1: f019b968383877b593014b0c81c20b4feaf20bb5
SHA256: 3384e2b263c9f352bb08b0036500fb7ba7e79ed82cb3ebaab8fa453b35999e51
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program to find Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs) in full genomes or environmental datasets such as metagenomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-miniasm-0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 334
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-miniasm-0.3_1.0_amd64.deb
Size: 130590
MD5sum: f64b5347d4353b7cf06be9f4594e6887
SHA1: c0694f0ef94e88d816c39cde282291be135f6e46
SHA256: 7dc59732b69fd3a8a20f757432de632ce0de6010e773628d25134174392f9e24
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-minigraph-0.15
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1003
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-minigraph-0.15_1.0_amd64.deb
Size: 373260
MD5sum: ab84088b3334220a08098312312173e3
SHA1: de78e300882615f029809fbda4d86fe5c7c38a8e
SHA256: 7f78d58a72a72793f2bd285d1765ae92e10af9e74f1e7a36b16a617676f09093
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Minigraph is a sequence-to-graph mapper and graph constructor.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-minigraph-0.18
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1330
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-minigraph-0.18_1.0_amd64.deb
Size: 489772
MD5sum: 183d8c87dbd61f693576d54901620e80
SHA1: 6ccdc5c667b914c4682dc639cc5e1abe74dcef3b
SHA256: 7ce9c802058a2e7af36a82580a5449c13d3a860e6e287a220f0def71282aaa81
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Minigraph is a sequence-to-graph mapper and graph constructor.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-minimap2-2.17
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 23999
Depends: gensoft-adm-python-2.7.17, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-minimap2-2.17_1.0_amd64.deb
Size: 7491924
MD5sum: c5c305c36c308729de646603118d42d1
SHA1: 5695b8e7e0c97d17788035b88c70312942794c15
SHA256: 690ae38b2f578e08f05b7bc2a9c6a6b2e866fc1e0a1a8a3ac17ebb9449b55948
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a versatile sequence alignment program that aligns DNA or mRNA sequences against a large reference database
License: unknown
Vendor: Institut Pasteur

Package: gensoft-minimap2-2.26
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 22989
Depends: gensoft-adm-python-2.7.17, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-minimap2-2.26_1.0_amd64.deb
Size: 7022720
MD5sum: 10043142b3f04945e07eeb1a2a1b01b2
SHA1: 0d0d59924e699eb1367f261ecf2ed55a75790725
SHA256: 22d2555238443fccf7191e3a7a84e9ca3e1e4b1f7c07fe3b6949d9322b0ae34c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a versatile sequence alignment program that aligns DNA or mRNA sequences against a large reference database
License: unknown
Vendor: Institut Pasteur

Package: gensoft-minipolish-0.1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12694
Depends: libc6, gensoft-adm-python-3.8.1, gensoft-minimap2-2.17, libstdc++6, gensoft-racon-1.4.3, libgcc-s1, gensoft-miniasm-0.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-minipolish-0.1.3_1.0_amd64.deb
Size: 3976980
MD5sum: fc0f4f41ef4886d5f5c468a27629ff33
SHA1: f682f6a14e57e2273c262b372a4620e65d5e54cc
SHA256: 0925f69925889d227c7107c948e6712f9f3a1942cbcb6557934f943962541832
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tool to polish up a miniasm assembly using Racon , while keeping the assembly in graph form.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mira-4.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4473
Depends: gensoft-gcc-9.2.0, gensoft-xz-5.2.4, gensoft-tcl-8.6.10, libc6, zlib1g, gensoft-icu-65.1, libbz2-1.0, gensoft-gperftools-2.7, gensoft-expat-2.2.9, gensoft-zstd-1.4.4, gensoft-boost-1.72.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mira-4.0.2_1.0_amd64.deb
Size: 2004072
MD5sum: 7dd8a181d5a1dcb9c39a6e8bbe38410d
SHA1: a52a3e655c70fe6eb431a0d009f0d3b0b53deecf
SHA256: 0210c30aed31b5acaf444ce11c6232f43f154d349db567ddba46507c34b10493
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio CCS and error corrected data usable, uncorrected not yet
License: unknown
Vendor: Institut Pasteur

Package: gensoft-miranda-3.3a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 632
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-miranda-3.3a_1.0_amd64.deb
Size: 125348
MD5sum: ed4f2de678b5c633ddf040ecf0160695
SHA1: d37fda1b17c761ad9edc4bb7ccb2a14f8cd2d50d
SHA256: 6f9b658a4de89cb0356aade45b08a5bd8dfe5e7a16fe40fe36576832588d30c7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an miRNA target scanner which aims to predict mRNA targets for microRNAs using dynamic-programming alignment and thermodynamics.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-misopy-0.5.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 282566
Depends: gensoft-samtools-1.10, gensoft-adm-python-2.7.17, gensoft-bedtools-2.29.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-misopy-0.5.4_1.0_amd64.deb
Size: 78018726
MD5sum: 309a245e3891e323aac4a3fd7e735dda
SHA1: 27750f3329143390f8714b2bd8cfd18f58fe6159
SHA256: b1eeca3300927727b02c3bfab702338dc833649cd33334b94675267bc793d644
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MISO (Mixture-of-Isoforms) is a probabilistic framework that quantitates the expression level of alternatively spliced genes from RNA-Seq data, and identifies differentially regulated isoforms or exons across samples. By modeling the generative process by which reads are produced from isoforms in RNA-Seq, the MISO model uses Bayesian inference to compute the probability that a read originated from a particular isoform.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mitofates-1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 18060
Depends: gensoft-gnuplot-5.2.8, libc6, gensoft-adm-perl-5.30.1, gensoft-libsvm-324
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mitofates-1.2_1.0_amd64.deb
Size: 2396396
MD5sum: c9e4a5231e1061eaadcd49f896304bac
SHA1: 156fa8ab761c17e1bda0f4ef6be5b67784fae352
SHA256: a64658c9c6eb3edbc5916ef9446a8ae711a6a63dbdd48ee26a16ea854e2b32ab
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MitoFates predicts mitochondrial presequence, a cleavable localization signal located in N-terminal, and its cleaved position
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mix-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 189360
Depends: libc6, gensoft-mummer-3.23, gensoft-adm-perl-5.30.1, libgcc-s1, libstdc++6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mix-1.0_1.0_amd64.deb
Size: 55216732
MD5sum: a4463111162fc8957b57aa872dfc1820
SHA1: 096bd40c2fd4de7340f4135018f50b9a2575e202
SHA256: 57fd3a54ec73016359cec201ea17a1523e5e5efad2f10d6ffb08831abd360737
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Mix is a tool that combines two or more draft assemblies, without relying on a reference genome and has the goal to reduce contig fragmentation and thus speed-up genome finishing.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mkl-2020.4.304
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3144222
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mkl-2020.4.304_1.0_amd64.deb
Size: 1112380522
MD5sum: a5c0b3bff08c02221f5a5fe22bfa607b
SHA1: ccb811c73798845cc3c5e5688e259679bbcbcea6
SHA256: ad275055f19286627fcd989e1b9abf834acc2ba4dd533e7c171bcc28b5600201
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mlpack-3.4.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 132865
Depends: gensoft-boost-1.72.0, gensoft-armadillo-9.800.4, zlib1g, libc6, gensoft-blas-3.8.0, gensoft-atlas-3.10.2, gensoft-gcc-9.2.0, gensoft-hdf5-1.10.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mlpack-3.4.2_1.0_amd64.deb
Size: 27308198
MD5sum: 4928a07682165591e4b6a14684a22a72
SHA1: 5125981dbecaba0cbf8ab6a2ec23a424431f7a86
SHA256: 532cdac5d97e151281baafeb9ff6a354bb8977498dcc437f91143531ed03fd28
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: fast, flexible C++ machine learning library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mlst-2.19.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 170488
Depends: gensoft-any2fasta-0.4.2, libc6, gensoft-blast+-2.10.0, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mlst-2.19.0_1.0_amd64.deb
Size: 13288212
MD5sum: c90efc6264b8444b5ff52620e5e8fb9e
SHA1: ee0ed6adb815e111d6bcf9cc2ccc19d2bf1fc469
SHA256: c4ecfaf699a8eb91b8d7aaa91e79287b6f6c42e03676a9ea01ee6926c8e12539
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Scan contig files against traditional PubMLST typing schemes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mlst-2.23.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 222199
Depends: gensoft-any2fasta-0.4.2, libc6, gensoft-blast+-2.14.1, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mlst-2.23.0_1.0_amd64.deb
Size: 17534326
MD5sum: db55d9245c8459bc8838ccf360a9da62
SHA1: 9178a6869bc6f7ed26e3499802d5a2dc04a6203e
SHA256: cb06fa7b022095f5b5a14507283a6739a7edab224b49535ba33b30b2265afd14
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Scan contig files against traditional PubMLST typing schemes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mm-common-1.0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5187
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mm-common-1.0.3_1.0_amd64.deb
Size: 532066
MD5sum: 491a850445f72ccfecc311fb273bb48d
SHA1: dc72d1f8c340bc2d0523aa6003fd1ec08e7e292e
SHA256: d4adcdaf86644f8528dac3027052c98a8bd22992f3fa8a86e264ecd8bc0c56b3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: mm-common module provides the build infrastructure and utilities shared among the GNOME C++ binding libraries.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mmdb2-2.0.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13584
Depends: gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mmdb2-2.0.5_1.0_amd64.deb
Size: 3623774
MD5sum: 9f4b2d087915c67168e9a6df712e4cc9
SHA1: 92a7018a674618a2109c352181f69bcb54001d42
SHA256: 74d62e47bc7990b277b4b1bcad18e15395c47076c1a23beda149b961889d00f4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MMDB is designed to assist developers in working with macromolecular coordinate files. The library handles both PDB and mmCIF format files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mmseqs2-10-6d92c
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 4145
Depends: libbz2-1.0, zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mmseqs2-10-6d92c_1.0_amd64.deb
Size: 1708392
MD5sum: 800aead38dda38699677c2a51ef3c935
SHA1: 358c0cbcc5f729ec029c70f387f506b64ae43260
SHA256: edb654ccb454de7aab204cdf4efe6c7e9a228baac0c5c9da0687f40dd92d0b79
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mmseqs2-11-e1a1c
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4792
Depends: libc6, zlib1g, gensoft-gcc-9.2.0, libbz2-1.0, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mmseqs2-11-e1a1c_1.0_amd64.deb
Size: 1912406
MD5sum: 44a5224e633e78e2dea844d68ab5e39c
SHA1: ae4c88a831708823a25c03647f3186d2049bed85
SHA256: e35e0a0cd23b2ab6496548a5257fde7c3edea179415c420833e22b4971290273
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mmseqs2-12-113e3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5808
Depends: gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, libbz2-1.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mmseqs2-12-113e3_1.0_amd64.deb
Size: 2286232
MD5sum: f68e47031854f985705ad67410c5d84d
SHA1: ed0eb750e73e3ea925cea059ea1a52af70622773
SHA256: 7d13ea6fc5a0ad326f651232b59b1c0a6efd4299565a83a6a5816644268be6f8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mmseqs2-13-45111
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6037
Depends: gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, libbz2-1.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mmseqs2-13-45111_1.0_amd64.deb
Size: 2362082
MD5sum: 562dbdd83dfad0b45e8ecaad0058fe48
SHA1: 52b3f02d3a3329ef59c94ab75eb1bc0b877a9455
SHA256: bfca9635759fa47c33da633597bbca4d741ab8116f1338d7f6b5f884d7d34d20
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mmseqs2-14-7e284
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 26410
Depends: gensoft-gcc-9.2.0, zlib1g, libbz2-1.0, libc6, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mmseqs2-14-7e284_1.0_amd64.deb
Size: 10126272
MD5sum: 83d63a421aa634a1946f567e287b68a1
SHA1: 0f1b3980c6807f0406ac22c7082232381e568223
SHA256: 2a53fdf1f783561c577759b8311c90ae749c12a343961247dd09ec67ef94ac91
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mmseqs2-15-6f452
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 26946
Depends: libbz2-1.0, zlib1g, gensoft-openmpi-4.0.5, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mmseqs2-15-6f452_1.0_amd64.deb
Size: 10292888
MD5sum: b9e2707cf10a90dc6edb4aa51bdd3dc0
SHA1: 38c184e750ed673aea614fa1f9b2e4eb04181573
SHA256: 872bd8238932cb91d2a79258f26af28cbda68f9b8b24975e447fbb86c5602053
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mmtsb-toolset-fa2e5ee
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 43074
Depends: gensoft-charmm-v45, libc6, gensoft-adm-perl-5.30.1, gensoft-blast-2.2.26, gensoft-gcc-9.2.0, gensoft-dssp-2.2.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mmtsb-toolset-fa2e5ee_1.0_amd64.deb
Size: 14445194
MD5sum: b873219f7d9fe39b03de2e7829d40829
SHA1: bbc30c1d264efeca9cb43ef738cdffc5fca97725
SHA256: 0c88f4fe98ca29b8a9497dc914ab9d1647b8142dec80410ed59f3062c906d281
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: (Multiscale Modeling Tools for Structural Biology) a collection of perl-based user-level utilities as well as programming libraries for multiscale protein structure modeling.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mob-suite-3.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 249631
Depends: libgcc-s1, libstdc++6, zlib1g, libc6, gensoft-adm-python-3.8.1, gensoft-blast+-2.10.0, libssl1.1, gensoft-mash-2.2, gensoft-curl-7.68.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mob-suite-3.0.1_1.0_amd64.deb
Size: 80312062
MD5sum: c5002f9845a3561ce3a72b4037b206d4
SHA1: 8c1a819408a94d75b80b151afcbb75ebb5da9295
SHA256: b3f8f4f671b111445fd8eac63b7f080a62fc7c239eb08f08cbe7a37fb0029340
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mobster-0.1.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 242803
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-mosaik-2.2.3, gensoft-bwa-0.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mobster-0.1.6_1.0_amd64.deb
Size: 85322944
MD5sum: 71bcd63c8061317ecb583778146fd6ee
SHA1: 81782f6918d5a8cb8c4a3228cead578f0e1c2115
SHA256: b427964b603cee893f626ab7c934c185508e4252971e2131e90f1d3c4fc0c2e9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: detect novel (non-reference) Mobile Element Insertion (MEI) events in BAM files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-modeltest-ng-0.2.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 3781
Depends: zlib1g, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-modeltest-ng-0.2.0_1.0_amd64.deb
Size: 1733904
MD5sum: ffa45d9338a0361e2266d2b41f4f4550
SHA1: 1d09e8af4d876bf9033a5bff9e55c4ca5f5f0749
SHA256: 8b8f57b4b01e25cef4ea80ed71becf38c167738469620c85258c374e7439b983
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ModelTest-NG is a tool for selecting the best-fit model of evolution for DNA and protein alignments.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-modules-4.4.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1722
Depends: less, gensoft-tcl-8.6.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-modules-4.4.0_1.0_amd64.deb
Size: 419174
MD5sum: e7bdf4946936588841444d70e8cb8525
SHA1: bde654901e41e02d228c9d3f44b4462dc5bf78ae
SHA256: 3bd069333ab5c52a0ac9ca2b976c48a6460fad7229d9d8f4f899979e3eefe625
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: environment modules package
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mono-6.12.0.122
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 629686
Depends: zlib1g, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mono-6.12.0.122_1.0_amd64.deb
Size: 213130872
MD5sum: 37cf20462fdda33fdd16a275742a7762
SHA1: 2e70f94079604dae378a36ea3e94d73c8263898a
SHA256: 455f750dfef9b649355dc652bca523edcff03db857e871b67012073224ff90b4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An open source, cross-platform, implementation of C# and the CLR that is binary compatible with Microsoft.NET.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mosaik-2.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1940
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mosaik-2.2.3_1.0_amd64.deb
Size: 811542
MD5sum: f070890cd3c35fdbbc8c06b57ceb49da
SHA1: 1d42b60578a2e44ee09b6cbade845ad9d92c725a
SHA256: bf97e00c5bae88780c190dd8c8c0cf1f1db3852f0956029096160700d456fe8f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MOSAIK is a reference-guided aligner for next-generation sequencing technologies.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mothur-1.43.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 18520
Depends: libc6, libreadline8, gensoft-gsl-2.6, libbz2-1.0, gensoft-zstd-1.4.4, libtinfo5, zlib1g, gensoft-xz-5.2.4, gensoft-gcc-9.2.0, gensoft-boost-1.72.0, gensoft-hdf5-1.10.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mothur-1.43.0_1.0_amd64.deb
Size: 7366458
MD5sum: bd9bb3b578032792c9cfe33f09268971
SHA1: b22edac12a170a428646a938df13b20c4bde65d7
SHA256: b55d6a525a1ded069234fa983bbb5c60080488afd2ecdb8508bdadef43d87af8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a single resource to analyze molecular data that is used by microbial ecologists. Many of these tools are available elsewhere as individual programs and as scripts, which tend to be slow or as web utilities, which limit your ability to analyze your data. mothur offers the ability to go from raw sequences to the generation of visualization tools to describe alpha and beta diversity
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mothur-1.44.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 17852
Depends: gensoft-xz-5.2.4, gensoft-gsl-2.6, zlib1g, gensoft-gcc-9.2.0, gensoft-boost-1.72.0, libbz2-1.0, libreadline8, libc6, gensoft-zstd-1.4.4, gensoft-hdf5-1.10.6, libtinfo5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mothur-1.44.3_1.0_amd64.deb
Size: 7129528
MD5sum: 264ae0cf311eb0b7a024a089e1258ecc
SHA1: cfebb0e1ff98c25e47e0e63309799b75c74f9e89
SHA256: 8bbfc39eaec16916f262a2305715b6866b1b7e2802e85c0b86bceb3c862ac2bb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a single resource to analyze molecular data that is used by microbial ecologists. Many of these tools are available elsewhere as individual programs and as scripts, which tend to be slow or as web utilities, which limit your ability to analyze your data. mothur offers the ability to go from raw sequences to the generation of visualization tools to describe alpha and beta diversity
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mothur-1.48.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 18385
Depends: libreadline8, gensoft-gsl-2.6, libtinfo5, gensoft-hdf5-1.10.6, gensoft-zstd-1.4.4, libc6, gensoft-boost-1.72.0, gensoft-xz-5.2.5, libbz2-1.0, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mothur-1.48.0_1.0_amd64.deb
Size: 7346146
MD5sum: ec1139c18fc3e99aa9caff9ac89dfdec
SHA1: 8db9e64837633b8de587633e9eaa57495c70c139
SHA256: 9cb77c74b67d3c348d96b992443d204a8232638c19f0c8d1a984b1beedaf4d47
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a single resource to analyze molecular data that is used by microbial ecologists. Many of these tools are available elsewhere as individual programs and as scripts, which tend to be slow or as web utilities, which limit your ability to analyze your data. mothur offers the ability to go from raw sequences to the generation of visualization tools to describe alpha and beta diversity
License: unknown
Vendor: Institut Pasteur

Package: gensoft-motif-2.3.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 70191
Depends: gensoft-xorg-libs-1.1, gensoft-libjpeg-turbo-2.0.4, gensoft-fontconfig-2.13.91, libc6, libbz2-1.0, gensoft-libpng-1.6.37, gensoft-expat-2.2.9, zlib1g, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-motif-2.3.8_1.0_amd64.deb
Size: 22427166
MD5sum: 6aa9a1085bcc5a3ad6311614ca29461b
SHA1: da91c181f626081a87cb45d037e92db3fe50e4f4
SHA256: 22674e7a758a1e8f288bf4a904446d1156ebc7a02392f833399e97ecb08ea538
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Motif is a freely available source code distribution for the Motif user interface component toolkit
License: unknown
Vendor: Institut Pasteur

Package: gensoft-motioncor2-1.5.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 3678
Depends: gensoft-xz-5.2.5, zlib1g, gensoft-libjpeg-turbo-2.0.4, gensoft-cuda-11.6, libstdc++6, libgcc-s1, gensoft-libtiff-4.1.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-motioncor2-1.5.0_1.0_amd64.deb
Size: 1410652
MD5sum: 97d5263a74a9a220f744cd9afca99105
SHA1: 08c4ba4ffeb6ebfed00cf32cdda9304dcf308986
SHA256: 1e15237cba1698bfd200f3029bc38ab387277c9f3e302a815c1fa97e6758f202
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MotionCor2 is a multi-GPU program that correects beam-induced sample motion recorded on dose fractionated movies stacks. it implements a robust and efficient iterative alignment algorithm that delivers precise measurement and correction of both global and local motions at single pixel leve, suitable for both single-particle and tomographic images.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mpc-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1604
Depends: gensoft-mpfr-4.0.2, gensoft-gmp-6.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mpc-1.1.0_1.0_amd64.deb
Size: 444172
MD5sum: 12f772d2e1f3e259f5a8f17cebd80853
SHA1: 99858416b677079d8147052535601e74702b67e1
SHA256: 8a9b813036c28b2ae91cdbda768c664b9e14d2d3a46fe97bf896227c2416aa26
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Gnu Mpc is a C library for the arithmetic of complex numbers with arbitrarily high precision and correct rounding of the result.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mpfr-4.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9842
Depends: libc6, gensoft-gmp-6.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mpfr-4.0.2_1.0_amd64.deb
Size: 2558740
MD5sum: 37076f0f3ccdb0421d329435b3a2d5f6
SHA1: 0522ec28cc6ad3aca31f27ebcc12694b13d6aa29
SHA256: f08ecb848dac72c69e999518df120ed86a0b6edb9d20b4a885674eaedba38bb3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MPFR is a portable library written in C for arbitrary precision arithmetic on floating-point numbers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mpibench-4c855b8
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 67
Depends: libc6, gensoft-openmpi-4.0.5, gensoft-adm-perl-5.30.1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mpibench-4c855b8_1.0_amd64.deb
Size: 20912
MD5sum: acc82b265644249ce0e89fafe8539307
SHA1: 33779be4cb35554441a9877a11465c0631ac3545
SHA256: 3415e5bbbfd094ee2cfa3554fb037e231b7ebbcee5c3ba39d8dc0f2163d366d5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MPI benchmark to test and measure collective performance
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mpifileutils-0.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4033
Depends: zlib1g, libc6, gensoft-openmpi-4.0.5, gensoft-xz-5.2.4, gensoft-libiconv-1.16, gensoft-libarchive-3.4.2, libssl1.1, gensoft-libxml2-2.9.10, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mpifileutils-0.10_1.0_amd64.deb
Size: 1169924
MD5sum: 6fe65ab2d54de5413465665bb496803d
SHA1: 0d6447b77757063edf6b97b0ccf3e4c2456c4635
SHA256: f1990b987ad0bd4ab6940e1b1f6258dd1d0fa45b0971b667ffc5537d07137355
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: File utilities designed for scalability and performance
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mrbayes-3.2.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3317
Depends: libreadline8, zlib1g, libc6, gensoft-gcc-9.2.0, libtinfo5, gensoft-beagle-lib-3.1.2, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mrbayes-3.2.7_1.0_amd64.deb
Size: 2237262
MD5sum: 2b438f82e4dece4a9902cd2fe51e2e84
SHA1: fe2147be736e5ae5452786d87de570910193fbfd
SHA256: 8c785376451d6fc8ac5265485c0f136c25e61064d324045918880417e6271a3f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program for the Bayesian estimation of phylogeny
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mreps-2.6.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 95
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mreps-2.6.0.1_1.0_amd64.deb
Size: 45788
MD5sum: 43bbc1a46de3cab7f37c848543715bcf
SHA1: 714fd7d2d98104a950a2346ce24c9213a86070e4
SHA256: 42093eae88b89453a2a9ac17af8815a5aa945004f1b7eb07b41a29d65458cd7a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A software for identifying serial repeats (usually called tandem repeats) in DNA sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-msa-2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 299
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-msa-2.1_1.0_amd64.deb
Size: 104664
MD5sum: d47b5baee431349c0da8e37ceae63b2b
SHA1: 55fe120c64d29853a6a178e782a8d6516dfdace1
SHA256: 06caea940577ae4c9c179a5a0623285155db61e583d3bcd11d6bbdb386ca98d0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program to do multiple sequence alignment under the sum-of-pairs criterion
License: unknown
Vendor: Institut Pasteur

Package: gensoft-msamtools-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2806
Depends: libc6, gensoft-argtable-2.13, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-msamtools-1.1.0_1.0_amd64.deb
Size: 1007418
MD5sum: bc9cb263293559edf3f7f31010ae1912
SHA1: d4b4df15b90a016a4eb5e3f90de8ea3a93e59d45
SHA256: 3f204b734064d6e2e5a1256bca8ae563981990f5b75ac45352306b2461a8a9fa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: msamtools provides useful functions that are commonly used in microbiome data analysis, especially when analyzing shotgun metagenomics or metatranscriptomics data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-msaprobs-1.0.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 385
Depends: libc6, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-msaprobs-1.0.5_1.0_amd64.deb
Size: 243062
MD5sum: ff9888d963ec68d8300294ff9c3ed261
SHA1: d8b75e063a035db053ed581d66de6e9577ba515c
SHA256: 780ae8adec7c823d01a9b5121109de2abc947524a9301f61dd7d1d482c19d1b6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MSAPROBS is a new and practial protein multiple sequence alignment algorithm based on pair hidden markov model and partition function posterrior probabilities.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mscentipede-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 283466
Depends: zlib1g, libssl1.1, libc6, gensoft-adm-python-2.7.17, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mscentipede-1.0_1.0_amd64.deb
Size: 89601462
MD5sum: b4691eb405994a724380dfccf78b81e8
SHA1: a97fa5d3181bb32fa6d2e20fdfd99c5174a9bcc8
SHA256: 136e12297c955585fb31789e02d881ae1cb48f291b7207e278e7614c7031d8c9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an algorithm for accurately inferring transcription factor binding sites using chromatin accessibility data (Dnase-seq, ATAC-seq)  The hierarchical multiscale model underlying msCentipede identifies factor-bound genomic sites by using patterns in DNA cleavage resulting from the action of nucleases in open chromatin regions (regions typically bound by transcription factors). msCentipede, a generalization of the CENTIPEDE model, accounts for heterogeneity in the DNA cleavage patterns around sites bound by transcription factors.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-msmc-im-e6c5d3b
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 247565
Depends: libstdc++6, libc6, zlib1g, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-msmc-im-e6c5d3b_1.0_amd64.deb
Size: 80208040
MD5sum: 6a8f7a4816677ddb4790db351a64c6e3
SHA1: a359e35dbd3b165dcafecf8100554be580990616
SHA256: ca9fc97c5d87291800dd28f98d81ec6e6f79cd53be73c91f8e25896a07bc8777
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A tool for estimating time-dependent migration rates based on cross-/within-population coalescent rates from MSMC
License: unknown
Vendor: Institut Pasteur

Package: gensoft-msmc2-2.1.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 4672
Depends: libc6, gensoft-gsl-2.6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-msmc2-2.1.3_1.0_amd64.deb
Size: 1379364
MD5sum: d0443e939f62f3fed92cda41d28960f4
SHA1: abf849d944d758e0ba2d4ff948648215fd67d4cb
SHA256: 903b6800d681df0c44354090fe923cc0bf9b072625216645e824d87d437c4325
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This program implements MSMC2, a method to infer population size history and population separation history from whole genome sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mspcrunch-2.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 360
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mspcrunch-2.5_1.0_amd64.deb
Size: 277608
MD5sum: d1027469ffb63bf49776930a066679d0
SHA1: 8eaf0f91d971664113872a63789b74c1a57d5dd1
SHA256: a1595d0ca5dce3838ef2cfd855a5d38ea27568167fd7a4c4c2fc88a5473d1ff7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A filtering tool for Blast matches
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mstclust-0.21b
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 7087
Depends: libbz2-1.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mstclust-0.21b_1.0_amd64.deb
Size: 2655164
MD5sum: fbd05626d50f5d855d2afdebd5435a9e
SHA1: 9719930d843c3a24ad92fcf7d925ec204d760025
SHA256: 0e3f04d65da4436262e3ba72536969980acc3311f1974eeee0dfc71474c48916
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MSTclust is a command line program written in Java to compute Minimum Spanning Tree (MST)-based clustering from either profile (i.e. tuples of positive integers) or pairwise distance data.  MSTclust can also be used to compute pairwise distances between profiles, single-linkage hierarchical classification trees, minimum spanning trees, and several statistics to assess the efficiency of a specific clustering.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-msweep-1.6.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 805
Depends: gensoft-bzip2-1.0.6, gensoft-gcc-9.2.0, gensoft-xz-5.2.5, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-msweep-1.6.3_1.0_amd64.deb
Size: 320386
MD5sum: 83ec85854dfa1a0b18eee38bd040e7c4
SHA1: e7465b7f9aa3202ac8fd1bd4e167e08bdc3d7489
SHA256: 640fcb4744d4812c31a8b8909a8181ebbfe1368d879e39f71f69b08537e07789
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fast and accurate bacterial community composition estimation on strain level by using pseudoalignments and variational inference.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mtdev-1.1.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 298
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mtdev-1.1.6_1.0_amd64.deb
Size: 97670
MD5sum: e55a55dfc1a355ffb325fec4a041b856
SHA1: 3dc5ba1557bf3bf3f032a9391502a32f0962e6f2
SHA256: c0ad135b9252b8796b1757b808f287b8141b57a5b6104cb5fcc0a60991c90efa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The mtdev is a stand-alone library which transforms all variants of kernel MT events to the slotted type B protocol. The events put into mtdev may be from any MT device, specifically type A without contact tracking, type A with contact tracking, or type B with contact tracking.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mtoolbox-1.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 231562
Depends: gensoft-java-1.8.0, libstdc++6, gawk, gensoft-genomeanalysistk-3.6, libgcc-s1, gensoft-samtools-1.10, gensoft-adm-python-2.7.17, gensoft-gmap-2015-07-23, sed, libc6, gensoft-muscle-3.8.31
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mtoolbox-1.2.1_1.0_amd64.deb
Size: 70753492
MD5sum: 2512f1ddb09eee5af0a629f84f2279a3
SHA1: 001d1705632a4be19425a4106f3100f3ada4e7e1
SHA256: bee1e65f95e4385bbe6420e8231b632d154f1e098c329058106817031664ab24
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-multalin-5.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 211
Depends: gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-multalin-5.4.1_1.0_amd64.deb
Size: 91854
MD5sum: 2ccf344e5dd30c3a4aa705c7cccf1617
SHA1: 75f2c8f18883fc39814d4e60cc8f413cc0e7ed27
SHA256: b3d72583ed2bc52261b78656f5d104667463249def02c605d6af72ec4e18fcc8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This software will allow you to align simultaneously several biological sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-multiqc-1.12
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 138171
Depends: gensoft-gcc-9.2.0, gensoft-libpng-1.6.37, libgcc-s1, libstdc++6, zlib1g, libc6, gensoft-adm-python-3.8.1, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-multiqc-1.12_1.0_amd64.deb
Size: 42894376
MD5sum: 40ddb5f7e0483ff27d1be9251a7a8db6
SHA1: 0719ed4340ec18fa8b111d7a325ebfc45d88bcdc
SHA256: edf2cec6c98e96cb379b7054985eb60e8b8ec1981bb5d2052d5936b3a13a2c20
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MultiQC is a tool to aggregate bioinformatics results across many samples into a single report. MultiQC searches a given directory for analysis logs and compiles a HTML report. Its a general use tool, perfect for summarising the output from numerous bioinformatics tools.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-multiqc-1.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 125581
Depends: gensoft-adm-python-3.8.1, gensoft-libpng-1.6.37, gensoft-freetype-2.10.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-multiqc-1.8_1.0_amd64.deb
Size: 40698106
MD5sum: 4c344f86bedc398645181a760085b2ed
SHA1: 25a6e404a11678f1310ba3b23f49994f3bfe494e
SHA256: 1c6da2ff89e9b4ef576f80c77e11a3dd896852b77ee6b75884d10d27b2f503a8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MultiQC is a tool to aggregate bioinformatics results across many samples into a single report. MultiQC searches a given directory for analysis logs and compiles a HTML report. Its a general use tool, perfect for summarising the output from numerous bioinformatics tools.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-multiqc-1.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 129635
Depends: gensoft-gcc-9.2.0, gensoft-adm-python-3.8.1, gensoft-freetype-2.10.1, gensoft-libpng-1.6.37
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-multiqc-1.9_1.0_amd64.deb
Size: 40452718
MD5sum: 4396505b235014ad148f105183d384ab
SHA1: 69db350e1e644a05b7f0214c91e4b1a9f2db9d51
SHA256: a180133526c9e291577d31233eebf6ce7df9ac7bc46aee0e931262e2b1b303f0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MultiQC is a tool to aggregate bioinformatics results across many samples into a single report. MultiQC searches a given directory for analysis logs and compiles a HTML report. Its a general use tool, perfect for summarising the output from numerous bioinformatics tools.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-multiz-tba-012109
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1169
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-multiz-tba-012109_1.0_amd64.deb
Size: 423474
MD5sum: 7de6f675c9b5fafce7f95c2c4c91b486
SHA1: 28c3c4f910c75813d7b663af8db4988a5e452275
SHA256: 4e302c4c4fac830636f07992f0bd6898bb3d4a17d7588e7cd6616cb257ad829b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multiz and TBA alignment programs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mummer-3.23
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6129
Depends: libc6, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, csh, gensoft-gnuplot-5.2.8, mawk
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mummer-3.23_1.0_amd64.deb
Size: 3086456
MD5sum: e71db8132ea85616d1b0097e5b7923ec
SHA1: fa05261757128460a631b1a9e8d5aadaa94745de
SHA256: 4ed0a04614c464e921de522e40c1b90e702f1ec5ab0ebe0ec6e7cd1a5a44cf03
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rapidly aligning entire genomes, whether in complete or draft form
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mummer-4.0.0rc1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 32090
Depends: gensoft-adm-perl-5.30.1, libc6, mawk, gensoft-gnuplot-5.2.8, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mummer-4.0.0rc1_1.0_amd64.deb
Size: 7609840
MD5sum: a208edde415216ddc9eba27b98b61829
SHA1: 07959c30371d2f23f102b0d5bec1a816c6d009b8
SHA256: 8263ba3d87ef966f69730a8baaa8bff73c7724fb624d9a283a8bf14dd0db0857
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rapidly aligning entire genomes, whether in complete or draft form
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mumps-5.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 11844
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mumps-5.3.1_1.0_amd64.deb
Size: 4263578
MD5sum: efae905ae7d48bd9626ec174db539e84
SHA1: 5d90b437e783705f4c4ff1800031a82f7a94ee1e
SHA256: b2156dc039a06e59a1fda3d3164e19f798f466e4ae016d3d784c487968161b09
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MUMPS a parallel sparse direct solver
License: unknown
Vendor: Institut Pasteur

Package: gensoft-muscle-3.8.1551
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 557
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-muscle-3.8.1551_1.0_amd64.deb
Size: 266614
MD5sum: e193356befcf6893a8ac428f9d3745e6
SHA1: 11a99d450ae160b0fb5f84bc0a0aad1d5f5a6891
SHA256: de3bf6438b9e3b61b1e2bb27a15646f2e5b929c1b7c4ae4875122adb44bcdbd4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multiple alignment software for protein and nucleotide sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-muscle-3.8.31
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 389
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-muscle-3.8.31_1.0_amd64.deb
Size: 175806
MD5sum: 08e8b2e68b6652ca9b1bc3ecf0d372b7
SHA1: e77da9cff56735d262e86f643be1ac152ff6c998
SHA256: 0f98eec22c2e7eee38d04c2a03532704a8102c9033ead88b56ed5299ff0916bd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multiple alignment software for protein and nucleotide sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-muscle-5.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 749
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-muscle-5.1_1.0_amd64.deb
Size: 343596
MD5sum: 988398c85c827963b2a2b8780faa3b1b
SHA1: 7652ac7897d03163cbfb0a44b77992ec88ddb458
SHA256: 5cc74195912bc928b72ced70d2cad488de96b619a4b2316ed3eca7d634d7220e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multiple alignment software for protein and nucleotide sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-music-1.1.16
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 120161
Depends: gensoft-gcc-9.2.0, gensoft-freeglut-3.2.1, gensoft-adm-python-2.7.17, gensoft-xorg-libs-1.1, gensoft-libdrm-2.4.100, gensoft-openmpi-4.0.5, libc6, zlib1g, gensoft-mesa-19.0.8, gensoft-expat-2.2.9, gensoft-glu-9.0.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-music-1.1.16_1.0_amd64.deb
Size: 28552314
MD5sum: 5f0808dbe14b41b69f79e163079f9103
SHA1: d53879a0d8bffa01042c67ca9f90cd26f4ed8df4
SHA256: 3ccb560f52890dcc911eadf06c026ea94a6f4b4f71e5244bf7a4afcb41424048
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an API allowing large scale neuron simulators using MPI internally to exchange data during runtime.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-musket-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 415
Depends: zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-musket-1.1_1.0_amd64.deb
Size: 191730
MD5sum: 7f74648ec0923557b6047ec679e91793
SHA1: 8f27a8e14d2708b4b036edb51b1b807e06532b8e
SHA256: fbfa637c1488b6c89d08584187e1827635a4adb0b601f2c79ea9280602657626
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an efficient multistage k-mer based corrector for Illumina short read data. This corrector employs the k-mer spectrum approach and introduces three correction techniques in a multistage workflow.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mustang-3.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 237
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mustang-3.2.3_1.0_amd64.deb
Size: 106098
MD5sum: d3ac124abc62fb68f93e7ec4f4eaca09
SHA1: 28f6f28e9e67320aee0fc7fb52bbcf62d77a19c1
SHA256: ac2e72ea4bd77defe053f648421d64d5aef6e24e66a6cb4d3a4c0d2372792c05
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MUltiple (protein) STructural AligNment alGorithm
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mutect-1.1.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10178
Depends: gensoft-java-1.7.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mutect-1.1.5_1.0_amd64.deb
Size: 9665514
MD5sum: 61db46e44c87c5916283e66b3f50d7b2
SHA1: f33d6aa9a4ce1c93132405bbb119fc7652d7d287
SHA256: 4a81da83abcd99a14c339a144f23ed6efc4495e49fb381c2de1c1db134ba9098
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a method developed at the Broad Institute for the reliable and accurate identification of somatic point mutations in next generation sequencing data of cancer genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-muttui-2.0.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 596378
Depends: gensoft-adm-python-3.8.1, libc6, gensoft-treetime-0.8.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-muttui-2.0.2_1.0_amd64.deb
Size: 191223680
MD5sum: 4433c73b2046deb98f3d2c9115fb25a6
SHA1: e6d021bcdea0ba3714c72fb6dc5d38e21037496b
SHA256: 6f73f4c3940738a403d004b69270cad4643abe7d399f47fed1bbf777b443d480
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MutTui pipeline to reconstruct mutational spectra for bacterial and viral datasets
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mview-1.67
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2149
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mview-1.67_1.0_amd64.deb
Size: 420680
MD5sum: 401f48ffecf99fc49553abc63a1c4b79
SHA1: a718fd014aaf919f407862b19a3f61cd44eb2055
SHA256: 4694754fe33428267794a848af550332c66bdeb49e4642adbfa4c4b04ef19456
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Reformats the results of a sequence database search (BLAST, FASTA, etc) or a multiple alignment (MSF, PIR, CLUSTAL, etc) adding optional HTML markup to control colouring and web page layout
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mykrobe-0.9.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 117520
Depends: libc6, gensoft-adm-python-3.8.1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mykrobe-0.9.0_1.0_amd64.deb
Size: 42486514
MD5sum: 264ba9669dfdf661689f48f71b8eb084
SHA1: 12e1e6257971a363c1010835f432654c025fe733
SHA256: 2031edd3dae3ff83cd8a407cb66632816a7ea4db471ecc6dcabdccca96752f00
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mysql++-3.3.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 17030
Depends: libssl1.1, libc6, gensoft-mysql-client-8.0.19, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mysql++-3.3.0_1.0_amd64.deb
Size: 4904360
MD5sum: a18c26a8b7828b90cce9d747293437f0
SHA1: d0f3ec8524636dd334141fa0d687d90648580900
SHA256: 7573f01681d90117a26e67bf0bab873f17f3db6c9ca41b9f3694dd0bbb5b6326
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-mysql-client-8.0.19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 746020
Depends: libncurses6, gensoft-pcre2-10.34, libcrypt1, libssl1.1, libc6, libtinfo6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-mysql-client-8.0.19_1.0_amd64.deb
Size: 295381488
MD5sum: 5e53970209affdb706e568835f0b0322
SHA1: 9db714851a477987f815727184cb295bcc1187c2
SHA256: aa6442ea746debb0918c586fdbc05207b6a66135da9118189455ca992affdfa4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MySQL is a widely used and fast SQL database server. Server is not provided by this installation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nanofilt-2.8.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 153387
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nanofilt-2.8.0_1.0_amd64.deb
Size: 46014718
MD5sum: 15fab4f11887795dafc94a53076b9ad1
SHA1: 601207742dbdc2e75e21d06913d4a029f165871c
SHA256: 3521fd630e45f9bafa476e98c6d429f23084e370fd9657ad9d360aed77d8ac18
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Filtering and trimming of long read sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nanopolish-0.12.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 531614
Depends: gensoft-adm-python-3.8.1, gensoft-expat-2.2.9, gensoft-gcc-9.2.0, gensoft-hdf5-1.10.6, gensoft-htslib-1.10, libc6, gensoft-adm-perl-5.30.1, gensoft-libxml2-2.9.10, libbz2-1.0, gensoft-libiconv-1.16, gensoft-curl-7.68.0, gensoft-xz-5.2.4, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nanopolish-0.12.0_1.0_amd64.deb
Size: 165480620
MD5sum: 5d3a0885caf56c4677f9f1596750565e
SHA1: 471b060b0922e2bc6bdfe6b147a99e795d2cc547
SHA256: 1ca15c7154bb281edfc7fdbe258273afc905d33625a344317bc880ac5277140e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Software package for signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more (see Nanopolish modules, below).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nanopolish-0.13.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 531546
Depends: gensoft-xz-5.2.4, zlib1g, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-curl-7.68.0, gensoft-htslib-1.10, gensoft-adm-perl-5.30.1, gensoft-libiconv-1.16, libc6, gensoft-adm-python-3.8.1, gensoft-expat-2.2.9, gensoft-libxml2-2.9.10, gensoft-hdf5-1.10.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nanopolish-0.13.2_1.0_amd64.deb
Size: 165469888
MD5sum: 36f676038730913694e22ae681d031a5
SHA1: 1a85e118bbd4658ab3e2f242c41ab807cca5b500
SHA256: 7a7f3cd8eaef7168d7b9a7b2b05dd0dddf742cb0b74199f9b2deba5a5c3c89a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Software package for signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more (see Nanopolish modules, below).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nanosv-1.2.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 84949
Depends: zlib1g, gensoft-adm-python-3.8.1, libc6, gensoft-sambamba-0.7.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nanosv-1.2.4_1.0_amd64.deb
Size: 25960352
MD5sum: c8452e719f8e6ef1b79866e0f347a12a
SHA1: fdee26807f65f872fa6343cc097aba7ac9678c9a
SHA256: cc8e494f0bdc487d633e43179ac7ab3187ab43cf763df60a40264ff05fb67959
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NanoSV is a software package that can be used to identify structural genomic variations in long-read sequencing data, such as data produced by Oxford Nanopore Technologies MinION, GridION or PromethION instruments, or Pacific Biosciences RSII or Sequel sequencers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nauty-27r3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 13596
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nauty-27r3_1.0_amd64.deb
Size: 6372680
MD5sum: ed503c67ee0dd3eee2392744e9fc9585
SHA1: 578c99b759f33cae0cb01c61a81664ed006df5ed
SHA256: 4c220377adb0065ff69fd47650ae8fd504e5f1aed5eb4a7daba583d08eace3b5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: nauty and Traces are programs for computing automorphism groups of graphs and digraphs. They can also produce a canonical labelling
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ncbi-vdb-2.10.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 35400
Depends: gensoft-ngs-2.10.2, zlib1g, libc6, gensoft-libiconv-1.16, gensoft-libxml2-2.9.10, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ncbi-vdb-2.10.2_1.0_amd64.deb
Size: 10295472
MD5sum: 6da0fd2377389d8b8ea8e46969933ebc
SHA1: c2b48538b66cc78f225b5a98f8af2fecd65b844b
SHA256: 60f4b739652a7b99b264e85762c5214738a70578ef7f6e21041ececab01a4fa3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ncbi-vdb-2.11.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 41211
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ncbi-vdb-2.11.2_1.0_amd64.deb
Size: 12498600
MD5sum: fe8a4df5a3ad881556e1dc14eebc1199
SHA1: 6c13a6d5e879851fed1cae015dd3e3314d36fee2
SHA256: 5b4fdac7a00e695d4edec86fb33e493db088da5e3e730744be9c4748d1b04c12
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ncbi-vdb-3.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 99069
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ncbi-vdb-3.0.0_1.0_amd64.deb
Size: 29046874
MD5sum: ca755eff3f77b43790e109f6280ce11f
SHA1: b5a80a0fd02fb9d0d2b34b63958b48d20a386a4e
SHA256: 30092ba8c7c0f0bb94ebd1a14773778eabda62ad9c68bae69771b43f8a736b4d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ncbitools-20170106
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 555215
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ncbitools-20170106_1.0_amd64.deb
Size: 208402608
MD5sum: 8f79ff951cda9badac67917e4f4aa899
SHA1: bc69a218ccd58bce3edbc44632bb3b35b2afa546
SHA256: 7a3b85b821a6b5a603579dd9043a8f1e81002429b108a7af0f344464b84e4a0e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The ToolBox model and code is used extensively within NCBI for the internal pipelines and tools such as GenBank, Entrez, BLAST, Sequin, OMIM, RefSeq, and others
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ncoils-2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 45
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ncoils-2.2_1.0_amd64.deb
Size: 11050
MD5sum: 77d31cb4d9ece70330ed7337c97bc9db
SHA1: 0f66ad585031151818a86f993b86a925b99fc529
SHA256: eaf4e84d7326e07a550b3c360145f222314b341a32f13a3cc688030db735a0be
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program that compares a sequence to a database of known parallel two-stranded coiled-coils and derives a similarity score
License: unknown
Vendor: Institut Pasteur

Package: gensoft-necat-0.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6448
Depends: gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-necat-0.0.1_1.0_amd64.deb
Size: 2605468
MD5sum: d9f0808356d34536e3a3ea59c8db853d
SHA1: 285cddfdc92ed802b9a1ee0bd8baaf519012b5af
SHA256: 5e46c409e69de06d608300a836b3d0c15ae9a1032a5641ccd449d766efb43644
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an error correction and de-novo assembly tool for Nanopore long noisy reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nest-simulator-2.20.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 28098
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nest-simulator-2.20.0_1.0_amd64.deb
Size: 7154214
MD5sum: f3c6769f9815e630290ec654348f9fd0
SHA1: be5b2744b85900eee6c2fdf92e17d3ae4e79a269
SHA256: f3eb37c8df8e16a555a832aa9ca607f245750987a06e24550b7079ce306492aa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NEST is a simulator for spiking neural network models that focuses on the dynamics, size and structure of neural systems rather than on the exact morphology of individual neurons
License: unknown
Vendor: Institut Pasteur

Package: gensoft-netcdf-4.7.3
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4998
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Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-netcdf-4.7.3_1.0_amd64.deb
Size: 1369906
MD5sum: 8065f881b88f7b1083643feab88dd4cc
SHA1: 5682682ff8b57f82a2db079605b93ba51d01e632
SHA256: d6af746d11566edc5d34a8554dadd840536ee2de3001a851b242bbd10556a9c9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NetCDF is a set of software libraries and self-describing, machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-netcdf-cxx-4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2024
Depends: gensoft-curl-7.68.0, gensoft-netcdf-4.7.3, gensoft-hdf5-1.10.6, gensoft-gcc-9.2.0, libc6, zlib1g, nasm
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-netcdf-cxx-4.2_1.0_amd64.deb
Size: 433596
MD5sum: 4bb0daddb71354fc7658ec4a7de4c670
SHA1: f64bb64990f7bfb4e60f1c0b94991df167eca822
SHA256: 2f0155e663156c1a30443edcfba88a51ca46858147969aae22d382863d61f270
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a netCDF-4 C++ library that depends on an installed netCDF-4 C library.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-netpbm-10.73.35
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8292
Depends: gensoft-libtiff-4.1.0, gensoft-libpng-1.6.37, gensoft-libxml2-2.9.10, zlib1g, libc6, gensoft-xorg-libs-1.1, gensoft-xz-5.2.4, gensoft-libjpeg-turbo-2.0.6, gensoft-libiconv-1.16
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-netpbm-10.73.35_1.0_amd64.deb
Size: 2275226
MD5sum: 312a1e68fbae7074060f74334f66142f
SHA1: 328a6187eb9af69b0a855a3f176cce79b0ee22b8
SHA256: 6ad1ece040462622b630f83a4c39ec401ef97e70db5f26b2fe54b9f84b966dcc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Netpbm is a toolkit for manipulation of graphic images, including conversion of images between a variety of different formats. There are over 300 separate tools in the package including converters for about 100 graphics formats.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nettle-3.5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30540
Depends: libc6, gensoft-gmp-6.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nettle-3.5.1_1.0_amd64.deb
Size: 8826760
MD5sum: d2f728692d41575dcdb71969b556f16f
SHA1: 6f4986fb015148b79cde55bffaa0616b2219c09a
SHA256: b337f21513009af98065585d574c0a3c7f4b1aff5187995aadc6d7eb315824d0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Nettle is a cryptographic library that is designed to fit easily in more or less any context. In crypto toolkits for object-oriented languages (C++, Python, Pike, ...), in applications like LSH or GNUPG, or even in kernel space.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-networkanalysis-2.0.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 18877
Depends: gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-networkanalysis-2.0.2_1.0_amd64.deb
Size: 17533596
MD5sum: 516e6338e1d22349a1ddd9d4765dcb39
SHA1: 6ec2f7589c61a0bb1af12878e4c2ebdef157c7f7
SHA256: b4bb6d4ad400f9a0f5c8325871aae390d959a0274f5c5425000bd9762d41f22a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Java package that provides data structures and algorithms for network analysis.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-neuma-1.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 110
Depends: gensoft-adm-perl-5.30.1, gensoft-bowtie-1.2.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-neuma-1.2.1_1.0_amd64.deb
Size: 24024
MD5sum: cc40c3616ea8d6a7a892bb7de1173221
SHA1: 423a8a02994abc771c0755d710d900f2761fcfdd
SHA256: d64f6948476a609380f8568c7c3b2f5e40ff7c7b89a35a9e44df1e75e879380b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Normalization by Expected Uniquely Mappble Area
License: unknown
Vendor: Institut Pasteur

Package: gensoft-newick-utils-1.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2634
Depends: gensoft-lua-5.1.4, gensoft-libxml2-2.9.10, gensoft-libiconv-1.16, zlib1g, libc6, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-newick-utils-1.6_1.0_amd64.deb
Size: 1466344
MD5sum: 99b1ac6ac485a4eff460e83db91021c2
SHA1: c0804c63431d4b878f7d578d46bb8f280a51d875
SHA256: 16fdb443e5900a129d257911f3d5729db18141897740dc0bf1498b288ce2f790
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Newick Utilities are a suite of Unix shell tools for processing phylogenetic trees. Functions include re-rooting, extracting subtrees, trimming, pruning, condensing, drawing (ASCII graphics or SVG).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nextflow-20.01.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 37768
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nextflow-20.01.0_1.0_amd64.deb
Size: 34157964
MD5sum: 6e555eb11c087da0ddda323afc11de0d
SHA1: 629422652d7d98489e9d963f7d8f27457fccde92
SHA256: 61715f8d80bb443efef30f9f524f9681d3ea1ba8eaa2046a41641097f4c19d5a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Nextflow enables scalable and reproducible scientific workflows using software containers. It allows the adaptation of pipelines written in the most common scripting languages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ngmlr-0.2.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9880
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ngmlr-0.2.7_1.0_amd64.deb
Size: 1923598
MD5sum: fa27194ff4adbe7ebcd453f079e2d695
SHA1: a8445d7f87b2ffa015b191940fd3a47f698d2875
SHA256: a9e1fa886cba82e1379bb83cb2c2271caed99c8d7527bb5e6b17baefc257ffa7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CoNvex Gap-cost alignMents for Long Reads (ngmlr) is a long-read mapper designed to sensitively align PacBilo or Oxford Nanopore to (large) reference genomes. It was designed to correctly align reads spanning (complex) structural variations. Ngmlr uses an SV aware k-mer search to find approximate mapping locations for a read and a banded Smith-Waterman alignment algorithm with a convex gap cost model that penalizes gap extensions for longer gaps less than for shorter ones to compute precise alignments. The gap model allows ngmlr to account for both the sequencing error and real genomic variations at the same time and makes it especially effective at more precisely identifying the position of breakpoints stemming from structural variations. The k-mer search helps to detect and split reads that cannot be aligned linearly, enabling ngmlr to reliably align reads to a wide range of different structural variations including nested SVs (e.g. inversions flanked by deletions).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ngs-2.10.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2959
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ngs-2.10.2_1.0_amd64.deb
Size: 684756
MD5sum: 2a6083081246b2b57c0fe4c4e30b3420
SHA1: 970d52b4135c31d11c18316b0e65787bf5295bcf
SHA256: bf19c711da402537471a4042d9c08c1064430cd78dd023286d0f2fdbc5d41479
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NGS is a new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing. The API itself is independent from any particular back-end implementation, and supports use of multiple back-ends simultaneously. It also provides a library for building new back-end engines
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ngs-2.11.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 2963
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ngs-2.11.2_1.0_amd64.deb
Size: 683790
MD5sum: be7475cc96c3e7f535b4972ca40fba9d
SHA1: 867fc450b9de9d4a67eb164f53b3ca35509156d8
SHA256: e161736662b56c2e6f6656a5112f49a8f2b82b635deb154468545f2f9f3c433b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NGS is a new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing. The API itself is independent from any particular back-end implementation, and supports use of multiple back-ends simultaneously. It also provides a library for building new back-end engines
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ngsplot-2.63
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 283203
Depends: gensoft-xz-5.2.4, gensoft-r-3.6.2, gensoft-diffreps-1.55.6, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, libssl1.1, gensoft-adm-python-2.7.17, gensoft-curl-7.68.0, libstdc++, libc6, gensoft-libxml2-2.9.10, zlib1g, gensoft-libiconv-1.16
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ngsplot-2.63_1.0_amd64.deb
Size: 105432518
MD5sum: 713fd2d944affbaa3cd43b03fd401e8b
SHA1: fb8d9e9b7a3daa2a86414da90ec13d946ec87f14
SHA256: 871bd391fac0892cacfed09d60f5e18065ed3d5fc27f263c85de0b7f1cf39997
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program that allows you to easily visualize your next-generation sequencing (NGS) samples at functional genomic regions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nh-phylobayes-0.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 182128
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nh-phylobayes-0.2.3_1.0_amd64.deb
Size: 57443456
MD5sum: c7a9af23a9f10bc7f09fd55cd74d5016
SHA1: d67981c405cb62b973b82c21e75a1562fb9fdd46
SHA256: 46e4398b8e0a0e0512da5325195befe537b19d95dd384f99f350d8f74fa6061f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Models for phylogenetic reconstruction. The phylogenetic models BP (Blanquart and Lartillot 2006) and CAT+BP (Blanquart and Lartillot 2008) implement non-stationary and non-homogeneous stochastic processes for both amino-acid and nucleotide substitutions. Both the models allow to fit global compositional variations along the phylogenetic tree branches, and CAT+BP moreover implements the CAT model component (Lartillot and Philippe 2004) estimating a mixture of site specific substitution processes. Those models are implemented into the NH_PhyloBayes package for phylogenetic reconstruction.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nhphyml-na
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 871
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nhphyml-na_1.0_amd64.deb
Size: 331800
MD5sum: c7cc1e72cf2dd3bb41b0eca680cdba42
SHA1: c1d6ed732439556df83f79701eb62e2d7160dea5
SHA256: bb7bcb1f9bab8a8ed0355d44f33b1666b350c82c1a5d15e4de78d1f6c1e458c1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program built to compute phylogenetic trees under the non stationary, non homogeneous model of Galtier and Gouy (1998).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nim-1.0.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 41670
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nim-1.0.6_1.0_amd64.deb
Size: 9213778
MD5sum: 23d911889b1b290b6137898c4b876947
SHA1: 13112ad2b3cf9a1bbe659233133444e25f1ca591
SHA256: 20a5d794b2e9596e7eb64bacf86c9d0159bbe7a0ee53ae0ed3ccca5964c1f451
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Nim is a systems and applications programming language. Statically typed and compiled, it provides unparalleled performance in an elegant package.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nim-1.2.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 41126
Depends: gensoft-gcc-9.2.0, gensoft-gdb-9.2, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nim-1.2.6_1.0_amd64.deb
Size: 9002176
MD5sum: 2f5dba6da3fc27fff867066dccd8b63b
SHA1: 97ec1d3cfded3f5d73777e54bc2004d138d0e416
SHA256: fa3a7f096d002f53c9d6d5103edc56c3e72e30fa2225b768250e62d2bcbdb81b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Nim is a systems and applications programming language. Statically typed and compiled, it provides unparalleled performance in an elegant package.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nim-1.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20895
Depends: gensoft-gcc-9.2.0, libc6, gensoft-gdb-9.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nim-1.4.2_1.0_amd64.deb
Size: 7172976
MD5sum: c1d4bcee75e1b62cb4165a5d4c9aba9c
SHA1: 1f0e50f9828032fce0d30c6ce3256cc1f165af26
SHA256: b9ddad319f3c58bbde9bbdad98c4024f44621d274f0a02943465b73e13d6eb7b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Nim is a systems and applications programming language. Statically typed and compiled, it provides unparalleled performance in an elegant package.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ninja-1.10.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6743
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ninja-1.10.0_1.0_amd64.deb
Size: 2170612
MD5sum: d9c905953a2fe47d78e3d3ca5535d8ea
SHA1: d3433177f3c0a2c6b1240ff8bee08a87b5ebb0fc
SHA256: 238d55b5731f1e4623deb9c14e9155286ebe0a67e265186f0a4fa595b90c826f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Ninja is yet another build system. It takes as input the interdependencies of files (typically source code and output executables) and orchestrates building them, quickly.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nlopt-2.6.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 798
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nlopt-2.6.1_1.0_amd64.deb
Size: 335678
MD5sum: 0ff4a86bfb0f62a9861bc440c7c8745e
SHA1: b5eb0727f2e94f41bedf318d635e16442bf42445
SHA256: 734c927310efba69df16a181836e5b33a75dc8e5f1a49c370109cc2240c3cdc4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NLopt is a free/open-source library for nonlinear optimization, providing a common interface for a number of different free optimization routines available online as well as original implementations of various other algorithms.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nodejs-12.16.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 70763
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nodejs-12.16.0_1.0_amd64.deb
Size: 23479130
MD5sum: cb78d4108eada273d340563649b5b32c
SHA1: 68ba304a83cd3e33336fc624fb70f9825bb1032c
SHA256: f6e53be7fd1a7434b02c33c74930a98c611d333b4fb2b13431119714e66c5be6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Node.js is a JavaScript runtime built on Chrome V8 JavaScript engine
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nodejs-14.15.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 97617
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nodejs-14.15.1_1.0_amd64.deb
Size: 34576770
MD5sum: 11e5c7256752be977d08f23e8a940ae6
SHA1: 1d3359b01e099bcdf5f6137229ecb8910956f70c
SHA256: 494788d4cdcb6977b13430fcdf399e045f13697980e33e2eb9ec7c5e5e527511
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Node.js is a JavaScript runtime built on Chrome V8 JavaScript engine
License: unknown
Vendor: Institut Pasteur

Package: gensoft-noisy-1.5.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7896
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-noisy-1.5.12_1.0_amd64.deb
Size: 1925616
MD5sum: 70c401f1749e2723ee3a35d5f8f1412e
SHA1: 68f025417e7d5fc81a93efbea0bb787ecdd74001
SHA256: c75246d4c1d26a3c4f549c2efa4fac76b9f80af4535597469aec0c6071338aeb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: identify homo-plastic characters in multiple sequence alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nps-1.3.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 88676
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nps-1.3.2_1.0_amd64.deb
Size: 26613568
MD5sum: 3d52f2684636009c98e14b94a42d8c27
SHA1: a98b52da1950480684ba5fc83a1736c9bd0d0923
SHA256: 87fe838273fc7e15004214be9be9fdf4b116b54d5968263c05a351015e179014
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Nucleosome Positioning from Sequencing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ntcard-1.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 155
Depends: zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ntcard-1.2.2_1.0_amd64.deb
Size: 57330
MD5sum: a2049969e3ddd3c1652a3030608f74b5
SHA1: 5e4f8c87c4bc1436f0532a41480ecf38ae583969
SHA256: 5ba2019531f81a23981b009b76365449fdcce33a4f1b77ca2f8b3d0086c4896b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a streaming algorithm for estimating the frequencies of k-mers in genomics datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ntl-11.4.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 133067
Depends: gensoft-gmp-6.2.0, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ntl-11.4.3_1.0_amd64.deb
Size: 29007720
MD5sum: 7d76cd7808c05af732bff3677f6e4799
SHA1: 5835f32ff7fdfb160c316dbc0cf71ccebc4d6c62
SHA256: c2a0a52e05533ac6d6bb53246a5f3a352724e3195b56aeb97191a9d55140b159
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NTL is a high-performance, portable C++ library providing data structures and algorithms for manipulating signed, arbitrary length integers, and for vectors, matrices, and polynomials over the integers and over finite fields.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nucleoatac-0.3.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 247326
Depends: gensoft-adm-python-2.7.17, libstdc++6, libc6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nucleoatac-0.3.4_1.0_amd64.deb
Size: 76336452
MD5sum: 1e0329877e041a721246317c428438d5
SHA1: d85745f9630bdd9fd7bd89742fac351aad6a11f2
SHA256: 5673dd8b363b411c365f52e00613c9cdd8c5adfc82b28497773453558a1a4fd4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: NucleoATAC is a python package for calling nucleosome positions and occupancy using ATAC-Seq data. Also includes general scripts for working with paired-end ATAC-Seq data (or potentially other paired-end data).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-numactl-2.0.14
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1063
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-numactl-2.0.14_1.0_amd64.deb
Size: 343018
MD5sum: f7fb16d8028914a84858c20ad982e7dd
SHA1: f1795363897a742c1c32e78c0aec07c8bf6ddf35
SHA256: 69394dcb5a9c3843819b59b1dd5967a0fdbcb469c0b3301a5cc0719bad4d0e57
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Simple NUMA policy support. It consists of a numactl program to run other programs with a specific NUMA policy and a libnuma shared library (NUMA API) to set NUMA policy in applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nupack-3.0.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13313
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nupack-3.0.6_1.0_amd64.deb
Size: 10529770
MD5sum: 07fbf2add7511a9e45660857d32e7c50
SHA1: 927ff01b300dd09e97500237bfe53cde43181b3f
SHA256: 1efa5ae8807d84a6f51ef044723602e53301ba8aaad4a1cd4a61dc0460af38bc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: software suite for the analysis and design of nucleic acid structures, devices, and systems.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-nvtop-1.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 110
Depends: libncurses6, libc6, libncursesw6, libtinfo6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-nvtop-1.2.2_1.0_amd64.deb
Size: 50160
MD5sum: 68fb63aca662c2342377409839a4f913
SHA1: d75bac8f8a4a4b20560e5764140856e7e3850423
SHA256: 2f3245653eb741ddab5a36b4ecabd8d3b5ebfc6d492a7e8ff7a3497fe8674de1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Simple, rapid, and statistically efficient test for recombination.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-oases-0.2.09
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1072
Depends: libc6, gensoft-adm-python-2.7.17, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-oases-0.2.09_1.0_amd64.deb
Size: 721138
MD5sum: 91eb649c24398d7bda02943f95291e03
SHA1: 82f499f6125d5f2a669ce17dc98ac56929e33a30
SHA256: b15d6e01e22cddd4e653477cbeb7cfc0e13d95b06fb59f93f82c14a4b31d818a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: De novo transcriptome assembler for very short reads. Oases is a de novo transcriptome assembler designed to produce transcripts from short read sequencing technologies, such as Illumina, SOLiD, or 454 in the absence of any genomic assembly.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ocaml-4.10.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 389313
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ocaml-4.10.0_1.0_amd64.deb
Size: 141575246
MD5sum: 1dc2bb8b8fb3d103169682efde11ce63
SHA1: 79265dd7da8804441f87743fbb86e629408a1e81
SHA256: 7cf076c457c7bfbdb9e2fa705392f483ba0542100c9e8c370f1afbbce3b6ce50
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OCaml is an implementation of the ML language, based on the Caml Light dialect extended with a complete class-based object system and a powerful module system in the style of Standard ML.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-octave-5.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 860840
Depends: libc6, gensoft-octave-5.2.0, gensoft-openblas-0.3.7, libssl1.1, gensoft-expat-2.2.9, gensoft-qhull-2019.1, libbz2-1.0, gensoft-atlas-3.10.2, gensoft-xorg-libs-1.1, gensoft-arpack-ng-3.7.0, gensoft-libpng-1.6.37, gensoft-libdrm-2.4.100, gensoft-fftw-3.3.8, gensoft-suitesparse-5.6.0, libreadline8, gensoft-hdf5-1.10.6, libtinfo5, gensoft-gcc-9.2.0, gensoft-fltk-1.3.5, gensoft-pcre-8.43, gensoft-fontconfig-2.13.91, gensoft-qrupdate-1.1.2, gensoft-glpk-4.65, gensoft-lapack-3.9.0, gensoft-curl-7.68.0, gensoft-mesa-19.0.8, zlib1g, gensoft-blas-3.8.0, gensoft-glu-9.0.1, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-octave-5.2.0_1.0_amd64.deb
Size: 238521746
MD5sum: fccaabfb07bd34f7f7a8c5b9e091f814
SHA1: a7b0b6c666bb636219f3b1daaac38bc1d47ac840
SHA256: e5c82f07fe5a397f34ba4ff7becaa8da7dce25e08b2af8ad8f58d3dd86f32a87
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: high-level interpreted language, primarily intended for numerical computations. It provides capabilities for the numerical solution of linear and nonlinear problems, and for performing other numerical experiments. It also provides extensive graphics capabilities for data visualization and manipulation. Octave is normally used through its interactive command line interface, but it can also be used to write non-interactive programs. The Octave language is quite similar to Matlab so that most programs are easily portable.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ode-0.13
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 31895
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ode-0.13_1.0_amd64.deb
Size: 7934926
MD5sum: b8be2d2e8a0eff1fd88f9d6ea84c2ca1
SHA1: dae50e8c370be230c7ebeba3a35a11cffad5b4fb
SHA256: 2a16af4b1a604c7a00302d0911bb3565a150191fa3e5bb3c54a1e5318f2c5427
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an open source, high performance library for simulating rigid body dynamics
License: unknown
Vendor: Institut Pasteur

Package: gensoft-odgi-0.6.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1411615
Depends: gensoft-jemalloc-5.2.1, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-odgi-0.6.3_1.0_amd64.deb
Size: 267320474
MD5sum: 0d676a7a691d6c2efb731778f30afe19
SHA1: 9b4baea234cc73669008dda9b5155eab3117e6ad
SHA256: 8a61291719c15182f9fd3151fccae19911086f901b1cf8a65fd92b45a9ed551a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: optimized dynamic genome graph implementation - a toolkit for understanding pangenome graphs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-odgi-0.7.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 52933
Depends: gensoft-jemalloc-5.2.1, gensoft-gcc-9.2.0, libc6, gensoft-sdsl-lite-2.3.1, gensoft-libdivsufsort-2.0.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-odgi-0.7.3_1.0_amd64.deb
Size: 15637654
MD5sum: 4ffe867c2cd35addc0b6b78afaeecb36
SHA1: 57a012d3f6fe91fe4af95cc2163bd0e9a21d6814
SHA256: cbb20e286254a648603c556b7bbc28dba666c27ddd6304ff985deae748e237d2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: optimized dynamic genome graph implementation - a toolkit for understanding pangenome graphs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-odgi-0.8.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 54030
Depends: libc6, gensoft-gcc-9.2.0, gensoft-libdivsufsort-2.0.1, gensoft-jemalloc-5.2.1, gensoft-sdsl-lite-2.3.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-odgi-0.8.2_1.0_amd64.deb
Size: 15953800
MD5sum: 6d46253ad5100c25c4c21fc1794f940f
SHA1: da208c8e666518eafee856fa2c7c679e4746fb66
SHA256: 4d916f8a04fe1f89138cd54274feceba27ba94550c11af9b6427e98e6f8a4dfb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: optimized dynamic genome graph implementation - a toolkit for understanding pangenome graphs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-odin-0.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 370585
Depends: gensoft-ucsc-tools-v390, zlib1g, gensoft-adm-python-2.7.17, libgcc-s1, libc6, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-odin-0.4.1_1.0_amd64.deb
Size: 110682410
MD5sum: 11076874ce882f6d7326ff6352b67795
SHA1: 63c30ad237c777ddf23b27946e0b5fcf190e4dc3
SHA256: f087eb0c0a574201c0482b90af33e4a1b1d7055f91e74044d0ccaeb34a2d6a26
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an HMM-based approach to detect and analyse differential peaks in pairs of ChIP-seq data. ODIN performs genomic signal processing, peak calling and p-value calculation in an integrated framework
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ogri-1.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 135
Depends: gensoft-prodigal-2.6.3, gensoft-blast+-2.12.0, gensoft-gawk-5.0.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ogri-1.0_1.0_amd64.deb
Size: 29404
MD5sum: dc31bd91bfac58403b3beeb99eacf026
SHA1: 34c39ee4e031304c5fb0a0fa0eca2b020045e256
SHA256: 97722b81817730b0a7481f0c23dc971608c2cc998895d2328a57ef0732789f4c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ogri-1.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 135
Depends: gensoft-prodigal-2.6.3.pp1, gensoft-blast+-2.13.0, gensoft-gawk-5.0.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ogri-1.1_1.0_amd64.deb
Size: 29546
MD5sum: 3b2d5e65f61e6dc3a9fe30d763384799
SHA1: 1cf14e171d79b6dbd929b609b845a2c8847d44bd
SHA256: 57be5875f6a96c18840bda23cba77552a0c8b5a5b706a7b5d7749195a7cc5477
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ohana-0.1.7666.41124
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 200439
Depends: gensoft-lapack-3.10.0, libstdc++6, gensoft-gcc-9.2.0, libc6, gensoft-adm-python-2.7.17, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ohana-0.1.7666.41124_1.0_amd64.deb
Size: 65170152
MD5sum: eb75ea3648bb204f7ed699513ae6de76
SHA1: 4535ee29d7f575a1c364b38d880406a4cb3e1fd5
SHA256: 28535009e14b220e0022f52105a51352d3492cb2ff9863eb5d80d1ef0cc00711
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a suite of software for analyzing population structure and admixture history using unsupervised learning methods.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-oma-2.5.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 116995
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-oma-2.5.0_1.0_amd64.deb
Size: 37074100
MD5sum: 6b6f9d21777bebcce3af1e6ca2034f40
SHA1: 6bd0f0583ae16e613cc7eeaa4f620a90c339aa8f
SHA256: 6c77a03584021b0623da57b7de1480decedfe5ad557830de56ad0856e17f5e2c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a standalone package that can infer orthologs using the OMA algorithm on custom genomes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-omegamap-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1747
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-omegamap-1.0_1.0_amd64.deb
Size: 859840
MD5sum: 526fa2916e2aa070faece6cf87d13fae
SHA1: f5d52e91840233ab7814f52d133d8d186402fb1e
SHA256: 071d6b62511b2e995e190e348c5fe9f704e8f564abe06954a40c28bfff253526
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program for detecting natural selection and recombination in DNA or RNA sequences. It is based on a model of population genetics and molecular evolution. The signature of natural selection is detected using the dN/dS ratio (which measures the relative excess of non-synonymous to synonymous polymorphism) and the signature of recombination is detected from the patterns of linkage disequilibrium.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-oncotator-1.9.9.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 220920
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-oncotator-1.9.9.0_1.0_amd64.deb
Size: 63503732
MD5sum: ee9952b427265762ef26bc0e1c97046f
SHA1: 38808457155029b6bd8f227e85894e6bd4dfaa35
SHA256: a005093c34121c554d95ae71ed49e26714cc206c3626133bfae1c2d813047b17
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Oncotator is a tool for annotating human genomic point mutations and indels with data relevant to cancer researchers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ont-guppy-6.2.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 2523652
Depends: libc6, libgcc-s1, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ont-guppy-6.2.1_1.0_amd64.deb
Size: 1506905876
MD5sum: e2599a701e44947936234283726c0c97
SHA1: e059a08d5d9566e4b0c7678837f513267ab46a60
SHA256: 8d1ba418470f1b498e8f15d5b319999a195b87848a1f6505aeb0fd4dc19f5eb5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Local accelerated basecalling for Nanopore data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ont-guppy-6.2.1-gpu
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2523680
Depends: gensoft-cuda-11.7
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ont-guppy-6.2.1-gpu_1.0_amd64.deb
Size: 1506898220
MD5sum: b99634002e8472ea51929f7d7f6cbbde
SHA1: 9058694120bf44f709e526b7dcf71c6d6b6fd474
SHA256: 44988411378ecd14299fb1028ffed6540dc3f8ba7b306f413333c8441fa305de
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Local accelerated basecalling for Nanopore data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ont-guppy-6.4.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1997090
Depends: libstdc++6, libgcc-s1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ont-guppy-6.4.2_1.0_amd64.deb
Size: 1099216794
MD5sum: c839e741921a2d0b1acc5441fd39b3fc
SHA1: 40f9ecc51088b146346a74390a111fa745d45030
SHA256: 24fa500c5e374aaf44c4a9e30744e2397567f757ed0552eef28f3d4a13a3319a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Local accelerated basecalling for Nanopore data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ont-guppy-6.4.2-gpu
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2844511
Depends: libstdc++6, gensoft-cuda-11.8, libgcc-s1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ont-guppy-6.4.2-gpu_1.0_amd64.deb
Size: 1668436370
MD5sum: 36874b78e980da060585a6e1610fa3be
SHA1: a3cc52e0b925cba5c8a8f378db93cd37bf9d7749
SHA256: f1fecf85bd7377dbd3deb5162560680541f145dbc92981656048b77a01c3fefd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Local accelerated basecalling for Nanopore data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openbabel-2.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 265605
Depends: gensoft-expat-2.2.9, gensoft-cairo-1.16.0, gensoft-xz-5.2.4, gensoft-pixman-0.38.4, gensoft-libiconv-1.16, gensoft-freetype-2.10.1, gensoft-gcc-9.2.0, gensoft-fontconfig-2.13.91, gensoft-xorg-libs-1.1, gensoft-libxml2-2.9.10, libc6, zlib1g, gensoft-libpng-1.6.37, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openbabel-2.4.1_1.0_amd64.deb
Size: 69025932
MD5sum: f195bdf602329a889ee652f9e7b78e10
SHA1: e177481a1904db2282660984e9e0e4017c094029
SHA256: 1a04d19f3819c641fa192bb3ea71bbe363cb17f4b03ebbec3e5e4eac24a54a0f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Open Babel is a chemical toolbox designed to speak the many languages of chemical data. Its an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openbabel-3.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20002
Depends: gensoft-libiconv-1.16, gensoft-libxml2-2.9.10, gensoft-xorg-libs-1.1, gensoft-cairo-1.16.0, gensoft-zstd-1.4.4, gensoft-boost-1.72.0, gensoft-pixman-0.38.4, gensoft-expat-2.2.9, gensoft-xz-5.2.4, libc6, gensoft-fontconfig-2.13.91, libbz2-1.0, zlib1g, gensoft-freetype-2.10.1, gensoft-libpng-1.6.37, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openbabel-3.1.1_1.0_amd64.deb
Size: 6494020
MD5sum: e413a055363b4e94a4a75f593d3229bb
SHA1: dc83b62f09f08eeca770090161f0d607891cdc20
SHA256: d340093ede6bdd10da55367ab6e45758d46285b25e148b509714127b1d8f726a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Open Babel is a chemical toolbox designed to speak the many languages of chemical data. Its an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openblas-0.3.21
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 44497
Depends: gensoft-cmake-3.19.4, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openblas-0.3.21_1.0_amd64.deb
Size: 12137256
MD5sum: 9ea73bcb804b4043eadaa031be83a4ce
SHA1: d79863487c0be3d144a1d460f40ea3fcce281231
SHA256: dabd946fd38aa0caa4c7f19356e5413c590176fd1522f49318ad4767f89fff0e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version. compiled with openmp support
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openblas-0.3.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 43112
Depends: gensoft-cmake-3.16.3, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openblas-0.3.7_1.0_amd64.deb
Size: 11704120
MD5sum: 5bc8dd54551c23856ef0c4bcf4b20c74
SHA1: 5adc96b47e524ec3f5936ddc9edc9c0751e6bcb3
SHA256: a3712998581869484ad8c23b2618f7c57df9f48ed78deafe3ec79b47b297fa13
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version. compiled with openmp support
License: unknown
Vendor: Institut Pasteur

Package: gensoft-opencl-sdk-light-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 496
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-opencl-sdk-light-1.0_1.0_amd64.deb
Size: 70152
MD5sum: 95495dca43787e6711b96348ee62d0ed
SHA1: b2500ac15d64ee1f81d1b933cace6b4d7801e1d2
SHA256: 447f8b0ff4a230bcbd278eb4a81f15b06135293de8a6cdda380832a6f3f8df49
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OpenCL SDK Lite that only contains headers and library files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openfold-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 8224600
Depends: gensoft-apptainer-1.1.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openfold-1.0.0_1.0_amd64.deb
Size: 8401120236
MD5sum: 9757d75442e86e5d52f59ee6823c74d7
SHA1: 4b0f1883f966bab16f18d5908a1d84f5ef1bb689
SHA256: 16d544b672480e99e42b57ee2e6c8e3aa4c4e4d7576b9e4f16ce3f2f2b7bd433
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openjpeg-2.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14892
Depends: gensoft-libtiff-4.1.0, gensoft-libpng-1.6.37, gensoft-xz-5.2.4, gensoft-libjpeg-turbo-2.0.4, zlib1g, gensoft-lcms2-2.9, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openjpeg-2.3.1_1.0_amd64.deb
Size: 2259764
MD5sum: 7a87cb2116b4b744ff91c52dbe8e3e7a
SHA1: 7d29b857a5e14cec4c1279fe6965f2f1d5ec7031
SHA256: d4c62f62f85a17f3c857c630fac590f9a167a109ff7fafc5e1b33ade1d242752
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OpenJPEG is an open-source JPEG 2000 codec written in C language.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openmm-7.5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 184160
Depends: gensoft-gcc-9.2.0, libc6, gensoft-cuda-11.2, gensoft-adm-python-2.7.17, gensoft-fftw-3.3.8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openmm-7.5.1_1.0_amd64.deb
Size: 44683962
MD5sum: 50df2fefe8eaab0f9410fe97358da4d0
SHA1: bdd55d068e92cca59b8e72e32e14504bf56b7cc3
SHA256: 2f761a037fde6e6ffb957966ef30927a0faf6e9268a4b678e60163e29fd5e6b5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a toolkit for molecular simulation using high performance GPU code.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openmpi-4.0.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 16973
Depends: libnl-route-3-200, libnuma1, libibverbs1, librdmacm1, openssh-client, libc6, gensoft-ucx-1.9.0, libnl-3-200, zlib1g, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openmpi-4.0.5_1.0_amd64.deb
Size: 5395942
MD5sum: 1ee0b16418baa6dae94911d0c4778735
SHA1: 81f00c4c1da279e6e277a7f7975c885d058994d2
SHA256: e4fe799080f14b6f8a084bdcbe66a10071b489e4838994ba7d3307352762c43d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: open source Message Passing Interface implementation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openmpi-4.1.5
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 17560
Depends: libnl-3-200, gensoft-ucx-1.9.0, libnl-route-3-200, openssh-client, libnuma1, gensoft-gcc-9.2.0, libibverbs1, libc6, gensoft-adm-perl-5.30.1, zlib1g, librdmacm1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openmpi-4.1.5_1.0_amd64.deb
Size: 5564044
MD5sum: 300e8335f7a8422b731dab7df0db24b3
SHA1: 2085d906e06a4c82bc93838441a8323c6a90e3f5
SHA256: 4b057748ea2c577886294a2269e02a3414a9a1f924e22016efb529f51067c30a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: open source Message Passing Interface implementation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-openslide-3.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1252
Depends: gensoft-cairo-1.16.0, zlib1g, gensoft-sqlite-3.31.0, gensoft-xorg-libs-1.1, libbz2-1.0, gensoft-libtiff-4.1.0, libblkid1, gensoft-pixman-0.38.4, gensoft-xz-5.2.4, libmount1, gensoft-freetype-2.10.1, gensoft-pcre2-10.34, gensoft-glib-2.58.3, gensoft-fontconfig-2.13.91, gensoft-libxml2-2.9.10, gensoft-libpng-1.6.37, gensoft-expat-2.2.9, gensoft-libffi-3.3, gensoft-libiconv-1.16, gensoft-gdk-pixbuf-2.36.12, libc6, libselinux1, gensoft-openjpeg-2.3.1, gensoft-libjpeg-turbo-2.0.4, libpcre2-8-0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-openslide-3.4.1_1.0_amd64.deb
Size: 475380
MD5sum: e9861c91f4b111cb23027ecb7557217e
SHA1: 552c75da62f3b2d33c6c5bacea5fe4dae612e188
SHA256: c6cc48cbd9b85c36bda481e05e9d5fe23a4077519735a45e1304bd96e7444879
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OpenSlide is a C library that provides a simple interface to read whole-slide images (also known as virtual slides).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-orfm-0.7.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 41
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-orfm-0.7.1_1.0_amd64.deb
Size: 17438
MD5sum: da562b36a12593b16e42a517b77f3b9a
SHA1: d8c23e3b0b59c8c624726d3918e10482777a0258
SHA256: 5da42bba7b4827f258068c7c760ab3a761daa6c1212b8471132eae0d25100647
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A simple and not slow open reading frame (ORF) caller. No bells or whistles like frameshift detection, just a straightforward goal of returning a FASTA file of open reading frames over a certain length from a FASTA/Q file of nucleotide sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-orthofinder-2.3.11
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 170090
Depends: gensoft-adm-python-2.7.17, gensoft-diamond-0.9.30, gensoft-mcl-14-137, libgcc-s1, gensoft-mafft-7.453, gensoft-iq-tree-1.6.12, gensoft-blast+-2.10.0, libstdc++6, libc6, gensoft-fasttree-2.1.11, gensoft-fastme-2.1.6.1, gensoft-muscle-3.8.1551
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-orthofinder-2.3.11_1.0_amd64.deb
Size: 51980070
MD5sum: 3d7375ef66f8a69ad13e5cd74a730e5a
SHA1: 087e6fa4b83da3a17a472b42869d6852a381c4c8
SHA256: 6a7e4cc05ac5708053806087d3453c7ccb93408c40afae487512856e1e56e7b7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OrthoFinder is a fast, accurate and comprehensive platform for comparative genomics. It finds orthogroups and orthologs, infers rooted gene trees for all orthogroups and identifies all of the gene duplication events in those gene trees. It also infers a rooted species tree for the species being analysed and maps the gene duplication events from the gene trees to branches in the species tree. OrthoFinder also provides comprehensive statistics for comparative genomic analyses. OrthoFinder is simple to use and all you need to run it is a set of protein sequence files (one per species) in FASTA format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-orthofinder-2.5.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 170150
Depends: gensoft-mcl-14-137, libc6, gensoft-fastme-2.1.6.1, gensoft-fasttree-2.1.11, gensoft-mafft-7.467, gensoft-blast+-2.10.1, gensoft-iq-tree-2.0.6, gensoft-adm-python-2.7.17, gensoft-diamond-2.0.6, gensoft-mmseqs2-13-45111, gensoft-muscle-3.8.1551
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-orthofinder-2.5.2_1.0_amd64.deb
Size: 52010268
MD5sum: 23770e6c4900d0e9c41872f4c991444a
SHA1: 46d8bac13db1af118c75f1536575fd958e9eb763
SHA256: e34b03901b2e9b66592067f7470f6934f5ac04ec3999918663aee51f5f7d4c1e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OrthoFinder is a fast, accurate and comprehensive platform for comparative genomics. It finds orthogroups and orthologs, infers rooted gene trees for all orthogroups and identifies all of the gene duplication events in those gene trees. It also infers a rooted species tree for the species being analysed and maps the gene duplication events from the gene trees to branches in the species tree. OrthoFinder also provides comprehensive statistics for comparative genomic analyses. OrthoFinder is simple to use and all you need to run it is a set of protein sequence files (one per species) in FASTA format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-orthofinder-2.5.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 169986
Depends: gensoft-fastme-2.1.6.1, gensoft-iq-tree-2.0.6, gensoft-mafft-7.467, gensoft-mcl-14-137, gensoft-diamond-2.0.6, gensoft-blast+-2.10.1, gensoft-adm-python-3.8.1, gensoft-fasttree-2.1.11, gensoft-muscle-3.8.1551, gensoft-mmseqs2-13-45111, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-orthofinder-2.5.4_1.0_amd64.deb
Size: 55983422
MD5sum: d6f8d0c99d1c9d12d1d96b50274d3bff
SHA1: 421bbbca573f8ab5aa55a8e6261dac2eed5ef56b
SHA256: d6e9ead5a3335fb2eb00cc75380bdbfb39a89846c907cd70bdac45e984610b02
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OrthoFinder is a fast, accurate and comprehensive platform for comparative genomics. It finds orthogroups and orthologs, infers rooted gene trees for all orthogroups and identifies all of the gene duplication events in those gene trees. It also infers a rooted species tree for the species being analysed and maps the gene duplication events from the gene trees to branches in the species tree. OrthoFinder also provides comprehensive statistics for comparative genomic analyses. OrthoFinder is simple to use and all you need to run it is a set of protein sequence files (one per species) in FASTA format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-orthofinder-2.5.5
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 199267
Depends: gensoft-mafft-7.505, gensoft-blast+-2.14.1, gensoft-fasttree-2.1.11, gensoft-adm-python-3.8.1, libc6, gensoft-diamond-2.0.15, gensoft-iq-tree-2.2.2.2, gensoft-fastme-2.1.6.4, gensoft-mmseqs2-15-6f452, gensoft-mcl-14-137, gensoft-muscle-5.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-orthofinder-2.5.5_1.0_amd64.deb
Size: 64226088
MD5sum: 510a0c5e0bb166806ff873b7832d0be3
SHA1: 23325cfef43213ddbc9c3e2b068ed9ef99d01a30
SHA256: 628fb523fbbfa43845ae193ea0f0e3a1e884d734caa2d2896ebdee21408f38f6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: OrthoFinder is a fast, accurate and comprehensive platform for comparative genomics. It finds orthogroups and orthologs, infers rooted gene trees for all orthogroups and identifies all of the gene duplication events in those gene trees. It also infers a rooted species tree for the species being analysed and maps the gene duplication events from the gene trees to branches in the species tree. OrthoFinder also provides comprehensive statistics for comparative genomic analyses. OrthoFinder is simple to use and all you need to run it is a set of protein sequence files (one per species) in FASTA format.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-osi-0.108.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1303
Depends: gensoft-gcc-9.2.0, libc6, gensoft-coinutils-2.11.4, gensoft-lapack-3.9.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-osi-0.108.6_1.0_amd64.deb
Size: 461346
MD5sum: a634d342e010c046a26192cc91d6e1a2
SHA1: 9d886873fe9d9de2e8f8ef6e8bfbca331a2c8681
SHA256: 0ecfd353570223030a15a88ea7616a97cc9f82ef84236a6334d387fc855c541e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Osi (Open Solver Interface) provides an abstract base class to a generic linear programming (LP) solver, along with derived classes for specific solvers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pairix-0.3.7
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 189
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pairix-0.3.7_1.0_amd64.deb
Size: 69968
MD5sum: ce586b0c18a6b67373046e5b23f87a4a
SHA1: ea195c38aef2cf23370880067ba8816fee436fb1
SHA256: 294091237486c59864a2fdc7b5ea69cb337fa0543c99877c76bdd461bab2b91d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: 1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pal2nal-14.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 66
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pal2nal-14.1_1.0_amd64.deb
Size: 13492
MD5sum: dd1ffb842a3f87bc60a6a205dfa30abc
SHA1: b8050893882a897a53fc00409e9706b1e838a5fa
SHA256: a97bee4d7079cb529897991afef07798cb3cfc466aef48e383eee0cb9d7e7dff
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: converts a multiple sequence alignment of proteins and the corresponding DNA (or mRNA) sequences into a codon alignment
License: unknown
Vendor: Institut Pasteur

Package: gensoft-paml-4.9j
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4020
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-paml-4.9j_1.0_amd64.deb
Size: 2705820
MD5sum: e273c90568fef1f7c982495538a522e8
SHA1: 649ed59f28965590f5f2e83bc3219b2fcb4b0a50
SHA256: bf0ac3fe91c2f8157e90011281eb49efc8a64b48d162b5023eaf0d3c902bdeb6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood
License: unknown
Vendor: Institut Pasteur

Package: gensoft-panacota-1.3.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 286184
Depends: gensoft-mash-2.2, gensoft-iq-tree-2.0.6, gensoft-gcc-9.2.0, libc6, gensoft-mafft-7.467, gensoft-iq-tree-1.6.12, gensoft-hmmer-3.3, gensoft-barrnap-0.9, gensoft-blast+-2.10.1, gensoft-prodigal-2.6.3.pp1, gensoft-adm-python-3.8.1, gensoft-fastme-2.1.6.1, gensoft-quicktree-2.5, gensoft-fasttree-2.1.11, gensoft-prokka-1.14.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-panacota-1.3.1_2.0_amd64.deb
Size: 91767110
MD5sum: de16357e8a2ccdbd7586ea40a527cee0
SHA1: 0c685ed548ae18cb0a183c6b436d727e572326aa
SHA256: 2d58425cd78e7904fee81f30a22c17dd2ed6af9ae901d7e2dcd38531d59d54d2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PanACoTA (PANgenome with Annotations, COre identification, Tree and corresponding Alignments) is a software providing tools for large scale bacterial comparative genomics.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-panacota-1.4.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 271452
Depends: gensoft-fastme-2.1.6.4, gensoft-prokka-1.14.5, gensoft-iq-tree-1.6.12, gensoft-prodigal-2.6.3.pp1, gensoft-fasttree-2.1.11, gensoft-blast+-2.13.0, gensoft-mafft-7.505, libc6, gensoft-quicktree-2.5, gensoft-adm-python-3.8.1, gensoft-mash-2.3, gensoft-barrnap-0.9, gensoft-mmseqs2-14-7e284, gensoft-iq-tree-2.2.2.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-panacota-1.4.0_1.0_amd64.deb
Size: 86829180
MD5sum: b1ba4d060a07caff833219f9a5d59f2f
SHA1: fee8374f81f923fc27ea5051b103b9ba8943f322
SHA256: 0e0f5d02e120f38248033db73590be3e7f1286756400beec6217157436e7fdb3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PanACoTA (PANgenome with Annotations, COre identification, Tree and corresponding Alignments) is a software providing tools for large scale bacterial comparative genomics.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-panaroo-1.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 553299
Depends: gensoft-adm-python-3.8.1, gensoft-clustalw-2.1, gensoft-mash-2.2, gensoft-tbb-2020.1, gensoft-prank-170427, gensoft-prokka-1.14.5, gensoft-cd-hit-4.8.1, gensoft-mafft-7.467
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-panaroo-1.2.3_1.0_amd64.deb
Size: 163630636
MD5sum: ceba05ee8d09dcc1599ee0c8a4e6adf2
SHA1: 92fd0e667bf0670fe971076ed7ae24b0187e3084
SHA256: ee8985bcd2d139c4e494c8ef1eab5c0db28b69d274b89bb6bc6f5eeb00e9da5b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An updated pipeline for pangenome investigation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-panaroo-1.3.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 587301
Depends: libc6, gensoft-tbb-2020.1, libstdc++6, libgcc-s1, gensoft-prokka-1.14.5, gensoft-mafft-7.467, gensoft-cd-hit-4.8.1, zlib1g, gensoft-mash-2.2, gensoft-prank-170427, gensoft-clustalw-2.1, gensoft-adm-python-3.8.1, libgomp1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-panaroo-1.3.0_1.0_amd64.deb
Size: 172163358
MD5sum: ef2acf0e2501510a2ff8ad1ed4fa4651
SHA1: 6d718a7ae4abb2c80189b02731574445f48e6372
SHA256: 723e39d8071f2e387b4a353dbcc31fe741c838aff00ac8064b9b388f5c1428bf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An updated pipeline for pangenome investigation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-panaroo-1.3.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 645463
Depends: libgomp1, gensoft-prank-170427, gensoft-cd-hit-4.8.1, gensoft-mash-2.3, gensoft-clustalw-2.1, gensoft-adm-python-3.8.1, libc6, libgcc-s1, gensoft-tbb-2020.1, libstdc++6, gensoft-prokka-1.14.5, gensoft-mafft-7.505, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-panaroo-1.3.4_1.0_amd64.deb
Size: 188436436
MD5sum: 5b4ab8de7352e40a95c09ac8c3c2ba7f
SHA1: 1c0d4538647fd508e571af598770b187ccab23a2
SHA256: 15fbc158fc451b261d4b0777c9e3b6d7642501a1085e9349c45a686a069ae2ca
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An updated pipeline for pangenome investigation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pandoc-2.10.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 114006
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pandoc-2.10.1_1.0_amd64.deb
Size: 24904406
MD5sum: b384f61ec33cc9fc92f3bfc15ba15712
SHA1: ed60784791686b1eb0a9766d7c58ad9972cca04e
SHA256: 7e23d67e534c2173c46fa0e79069ffe028f43b0471e0488171f0cf325fb1f26e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: If you need to convert files from one markup format into another, pandoc is your swiss-army knife.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pandoc-2.9.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 109145
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pandoc-2.9.2.1_1.0_amd64.deb
Size: 23937788
MD5sum: eb602a1ff3d2eeb00c417ed1b7260012
SHA1: 0c16074505cc2f56077949f5845f87030f77bafa
SHA256: 8c5d0c6f046519f90ce5e8469b46963edd38d56bcccc702fe6c5e2e7885aa2dc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: If you need to convert files from one markup format into another, pandoc is your swiss-army knife.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pandoc-3.1.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 382714
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pandoc-3.1.2_1.0_amd64.deb
Size: 80276410
MD5sum: 66881d395992cbc2c5d6950128f27ad0
SHA1: 19fc7cd18411378acda782648540a14012c23ed4
SHA256: d8550c84f5293189d83b693540c61523d6cc5f1752c67d38df3dd8d81099a2be
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: If you need to convert files from one markup format into another, pandoc is your swiss-army knife.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pango-1.42.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4936
Depends: gensoft-expat-2.2.9, gensoft-pixman-0.38.4, gensoft-fontconfig-2.13.91, libfribidi-dev, zlib1g, gensoft-libffi-3.3, gensoft-xorg-libs-1.1, gensoft-help2man-1.47.12, libc6, gensoft-glib-2.58.3, libfribidi0, gensoft-harfbuzz-2.6.4, gensoft-cairo-1.16.0, libbz2-1.0, gensoft-libpng-1.6.37
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pango-1.42.4_1.0_amd64.deb
Size: 1265866
MD5sum: c48ebe31204bf76bb25cdf88c2debc11
SHA1: 81f91c8eba42cc03e93ae40637ea9dc081aee0ff
SHA256: 7464bda239b95c834523a645e801896be33c9c48b7d90cdd9c54509a14d5c551
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pango is a library for laying out and rendering of text, with an emphasis on internationalization.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pango-1.48.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4246
Depends: gensoft-libpng-1.6.37, zlib1g, gensoft-glib-2.66.7, gensoft-pixman-0.38.4, gensoft-expat-2.2.9, libpcre2-8-0, gensoft-freetype-2.10.1, gensoft-gcc-9.2.0, gensoft-fontconfig-2.13.91, libblkid1, gensoft-harfbuzz-2.6.7, gensoft-libiconv-1.16, libbz2-1.0, libfribidi-dev, libfribidi0, gensoft-pcre2-10.34, gensoft-cairo-1.17.4, gensoft-xorg-libs-1.1, libmount1, libselinux1, libc6, gensoft-libffi-3.3, gensoft-pcre-8.43
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pango-1.48.2_1.0_amd64.deb
Size: 1255108
MD5sum: 3a2e311e3e8ca4c7ff52ad8f2dd94199
SHA1: a6acdb72364baf9932c7876b9e8af1317ccb2d37
SHA256: b2605c4c2ce83766fdb1c6854d3efcca07791c856496a9d775c87f5b4a2057f6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pango is a library for laying out and rendering of text, with an emphasis on internationalization.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-panicmage-1.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 433
Depends: libc6, gensoft-gmp-6.2.0, gensoft-gcc-9.2.0, gensoft-cln-1.3.6, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-panicmage-1.3.0_1.0_amd64.deb
Size: 348074
MD5sum: 553f3e73cedb83789eeb8356ffac2567
SHA1: 2f14d2e1a3dcd5f8f583a19e83f9adee6715af47
SHA256: f956da6db3fc34723967c5d3af6f018c78f4f9b4c4d8724eec6bfc97df01afc1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Panicmage is a shortcut for pangenome analyzer for infinitely - which means considerably - many genes. panicmage estimates the parameters of the infinitely many genes model for given datasets and performs statistical tests on neutral genome evolution and sampling bias.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-panseq-3.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 19327
Depends: gensoft-adm-perl-5.30.1, gensoft-xz-5.2.4, zlib1g, gensoft-expat-2.2.9, gensoft-cd-hit-4.8.1, gensoft-mummer-3.23, gensoft-libiconv-1.16, gensoft-blast+-2.10.0, libc6, gensoft-muscle-3.8.1551, gensoft-libxml2-2.9.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-panseq-3.2.1_1.0_amd64.deb
Size: 5111668
MD5sum: e056b381ee6a5ed4a77dff56d78e3b09
SHA1: 71100d5bd6683307b18e709403f88a704c4a45b1
SHA256: 31324f0650ebacc0c6731f9305c4c4a2d2307930b6a233ccfd5fa638199e67de
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: determines the core and accessory regions among a collection of genomic sequences based on user-defined parameters. It readily extracts regions unique to a genome or group of genomes, identifies SNPs within shared core genomic regions, constructs files for use in phylogeny programs based on both the presence/absence of accessory regions and SNPs within core regions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-papi-5.7.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 544380
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-papi-5.7.0_1.0_amd64.deb
Size: 360166242
MD5sum: 41686fa6a7bd06daca460c426d344dee
SHA1: 829046ef2c8d076c687c4deaaf00d14ca30f75bf
SHA256: 1736852242aba6aab7ea465df6d64c4bfd0fc15732e72fb43d52949cae8a333e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Performance Application Programming Interface
License: unknown
Vendor: Institut Pasteur

Package: gensoft-parabricks-4.0.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1866496
Depends: gensoft-apptainer-1.1.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-parabricks-4.0.1_1.0_amd64.deb
Size: 1906135788
MD5sum: 044e745c6e7b1e9d772005c5147ad3d5
SHA1: b06ce5d2d2e3a8d7fafdf49399da0cdb2ae7ac28
SHA256: 4b27ce7c0d29197e9d3d57b15e5d2d2fbcd43bfc84dc83e39b4670e9619bac86
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Nvidia Clara Parabricks is an accelerated compute framework that supports applications across the genomics industry, primarily supporting analytical workflows for DNA, RNA, and somatic mutation detection applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-paradiseo-3.0.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 30973
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-paradiseo-3.0.0_1.0_amd64.deb
Size: 4281926
MD5sum: 616be6a5a0f5fbf0d911b892e7d89bf1
SHA1: 2f06b940411f711d2a5f49392b4d58ba2bd3e9f3
SHA256: e554fb1f4d9647032ac98e628e29e2694bde01854da51d827e963c08e05071dd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An evolutionary computation framework to (automatically) build fast parallel stochastic optimization solvers
License: unknown
Vendor: Institut Pasteur

Package: gensoft-parallel-20200222
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2992
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-parallel-20200222_1.0_amd64.deb
Size: 1651354
MD5sum: 321a5feb940fcead3a302f35c4b956c4
SHA1: b2ed4adb7fc174255ebcff7e6d5ac7b52023de09
SHA256: c933bbb6072ed7e93b34966844161809a4725f0b07e78ce9366966e7a6a9b354
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: GNU parallel is a shell tool for executing jobs in parallel using one or more computers
License: unknown
Vendor: Institut Pasteur

Package: gensoft-parasail-2.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 155217
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-parasail-2.4.1_1.0_amd64.deb
Size: 35262128
MD5sum: b165b8f8e48faa31cdcef44eac9b77d7
SHA1: 7546af10dd4e4d1007029fad169be570359035c1
SHA256: 110fd95e512de442834005813642afecb8278a5c6d1b1b00a1cf7d9b629c8b86
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pairwise Sequence Alignment Library. parasail is a SIMD C (C99) library containing implementations of the Smith-Waterman (local), Needleman-Wunsch (global), and various semi-global pairwise sequence alignment algorithms.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pari-2.9.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 15174
Depends: gensoft-adm-perl-5.30.1, libtinfo5, libc6, libreadline8, gensoft-gmp-6.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pari-2.9.5_1.0_amd64.deb
Size: 5840542
MD5sum: 8e006681204ce6e44ecd95d762444ea6
SHA1: 992f69e20db50aaaf3c520c27a9e11e0478f3757
SHA256: 7b554564b2634498a35a89b60ef700f2a27290bcf6c9174dc98da57177384f78
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PARI/GP is a widely used computer algebra system designed for fast computations in number theory (factorizations, algebraic number theory, elliptic curves...), but also contains a large number of other useful functions to compute with mathematical entities such as matrices, polynomials, power series, algebraic numbers etc., and a lot of transcendental functions. PARI is also available as a C library to allow for faster computations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-parsimonator-1.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 123
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-parsimonator-1.0.2_1.0_amd64.deb
Size: 59490
MD5sum: 44afe9879c18c7d583e5b5a0e8935eb1
SHA1: 5cbc29dcc8dc2fc1a13f04e3c2186ce58fac5409
SHA256: de57f0eb2fad32340a30e97badfdcac2b256278efe548a475f3b633dcc093ffa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Parsimonator is a no-frills light-weight implementation for building starting trees under parsimony for RAxML-Light. It deploys a randomized stepwise addition order algorithm to build trees and thereafter conducts a couple of SPR (Subtree Pruning Re-Grafting moves) to further improve the parsimony score.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-parsnp-1.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7984
Depends: gensoft-gcc-9.2.0, libc6, gensoft-libmuscle-1.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-parsnp-1.2.1_1.0_amd64.deb
Size: 1743624
MD5sum: 28a0baaa5996509fd4c5a53e43243929
SHA1: 7641a0dde8ff4cfe12769bc62924d932e9547388
SHA256: b30b01259df8433bb4fff58b68f1e14f61199733ad72f8d163afd06396baca73
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes within a few minutes to few hours. Input can be both draft assemblies and finished genomes, and output includes variant (SNP) calls, core genome phylogeny and multi-alignments.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-parsnp-1.5.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 79078
Depends: gensoft-adm-python-3.8.1, gensoft-gcc-9.2.0, gensoft-fasttree-2.1.11, libc6, gensoft-harvest-tools-1.3, gensoft-libmuscle-1.0.0, gensoft-phipack-1.0, gensoft-raxml-8.2.12
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-parsnp-1.5.4_1.0_amd64.deb
Size: 22952548
MD5sum: dd6ef44f59d9abf805ccdf73143b28d1
SHA1: b6c93179297529c266338ca2a94955c61f4f35ee
SHA256: 9f515ca371c0fe3c94e6a4abc88cf8d40c11048dc9519c6aba159231b33dab12
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes within a few minutes to few hours. Input can be both draft assemblies and finished genomes, and output includes variant (SNP) calls, core genome phylogeny and multi-alignments.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-parsnp-1.5.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 83333
Depends: libgcc-s1, gensoft-raxml-8.2.12, gensoft-gcc-9.2.0, which, gensoft-harvest-tools-1.3, gensoft-adm-python-3.8.1, gensoft-fasttree-2.1.11, gensoft-phipack-1.0, libcrypt1, zlib1g, libc6, gensoft-libmuscle-1.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-parsnp-1.5.6_1.0_amd64.deb
Size: 24107088
MD5sum: bf1eb60c9bd21219d11fb3f8c40999c8
SHA1: 1966ca2f5527f7a48bf9508d032df8e74f8b1d9f
SHA256: 0573b8a3d11d260c03cc3a74e8848e8eba10c4744da0e562f832aa25fc4afba2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes within a few minutes to few hours. Input can be both draft assemblies and finished genomes, and output includes variant (SNP) calls, core genome phylogeny and multi-alignments.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-parsnp-1.6.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 83334
Depends: gensoft-phipack-1.0, gensoft-harvest-tools-1.3, gensoft-fasttree-2.1.11, gensoft-libmuscle-1.0.0, gensoft-raxml-8.2.12, gensoft-adm-python-3.8.1, zlib1g, libcrypt1, gensoft-gcc-9.2.0, which, libgcc-s1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-parsnp-1.6.2_1.0_amd64.deb
Size: 24107304
MD5sum: a0bb3050e6487c923d1cff094faead56
SHA1: 36c05c37cea8f1220c1f8292271373643c2d4de6
SHA256: a81458e7ff80452e48d5f4655a95bb6e52f52e2c4dd516ebdbd9300ee77d49c5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes within a few minutes to few hours. Input can be both draft assemblies and finished genomes, and output includes variant (SNP) calls, core genome phylogeny and multi-alignments.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pastml-1.9.34
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 303952
Depends: libgcc-s1, gensoft-adm-python-3.8.1, libstdc++6, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pastml-1.9.34_1.0_amd64.deb
Size: 96012578
MD5sum: 95e69065a2a3aaf655d2b3856b2bddbb
SHA1: 2f8083b3eed7a7b0a6f4c40f81c93a0e730d51c3
SHA256: 9b4f28c96665cfa6df9bb2ff304dfea015fd5a76fe42379ec5d0fb39d5eb47b1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: provides fast methods for Ancestral Character Reconstruction (ACR) and visualisation on rooted phylogenetic trees. Given a rooted tree and its node annotations, it can either visualise them as-is, or infer ancestral node states based on the tip states, with a selection of maximum likelihood and parsimonious methods.  The result is then visualised as a zoomable html map.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pastml-1.9.41
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 283459
Depends: libstdc++6, libc6, libgcc-s1, zlib1g, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pastml-1.9.41_1.0_amd64.deb
Size: 88698892
MD5sum: a71dee6eb85866127aad2bd83662fd6f
SHA1: 34febfabe752e49ff2b31de8fa77696997f23a2e
SHA256: 315ea2bd006c2a0bfb749c84115383e5d60a4135ecb93fe5596717e064811303
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: provides fast methods for Ancestral Character Reconstruction (ACR) and visualisation on rooted phylogenetic trees. Given a rooted tree and its node annotations, it can either visualise them as-is, or infer ancestral node states based on the tip states, with a selection of maximum likelihood and parsimonious methods.  The result is then visualised as a zoomable html map.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-patchelf-0.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2765
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-patchelf-0.10_1.0_amd64.deb
Size: 693490
MD5sum: 74b82bac180971120c3ac1e07b023c3e
SHA1: 32d9532cc10472600d50a786c5a5434a0f0db8f3
SHA256: 7de02f407a37a69e5d405525b8dcb9be005094074e3e19a2c755123d299b01e9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PatchELF is a small utility to modify the dynamic linker and RPATH of ELF executables.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pbalign-0.3.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 150362
Depends: gensoft-curl-7.68.0, zlib1g, libc6, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17, gensoft-samtools-1.13, libbz2-1.0, libssl1.1, gensoft-pbbam-1.0.7, gensoft-blasr-5.3.3, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pbalign-0.3.2_1.0_amd64.deb
Size: 48009228
MD5sum: ae6379cc4efe9eb11822060cb984c014
SHA1: 5679fa27ef8ba4b58e9d2dc363952016ea952f19
SHA256: a58f46753fe1d8d7fae32075e717added9ba6d3a40c433591be1a0ef4149829a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This tool gets a CRISPR profile by identifying the presence of known spacers and direct repeats (DRs) in a given sequence based on a catalogue.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pbccs-6.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6937
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pbccs-6.0.0_1.0_amd64.deb
Size: 3268042
MD5sum: 6d3723a4753c914f6d6c6b9b3420a6cd
SHA1: ff4bbc48218550d56d8fb081597f58eec46fad73
SHA256: 0178e9246dc1270bf7032f353479a4b1a40441c06ca7286fe5d8931652516593
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ccs combines multiple subreads of the same SMRTbell molecule using a statistical model to produce one highly accurate consensus sequence, also called a HiFi read, along with base quality values. This tool powers the Circular Consensus Sequencing workflow in SMRT Link.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pbcopper-1.6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4836
Depends: gensoft-gcc-9.2.0, gensoft-boost-1.72.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pbcopper-1.6.0_1.0_amd64.deb
Size: 1336940
MD5sum: e3ced195805af0a497e003241758b1ba
SHA1: 9be4d0018f53629ed916ebfe89c14a64c99f9be2
SHA256: a0fcf232bd1743d4931d5ec096b447e4ee2ee7c29f3e941f5019169206377a0f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The pbcopper library provides a suite of data structures, algorithms, and utilities for PacBio C++ applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pbh5tools-2.3.0p4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 146925
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pbh5tools-2.3.0p4_1.0_amd64.deb
Size: 47381554
MD5sum: cd6c9f0c19b371c37cbda9721ec53f59
SHA1: 09794764a9bfd5fae210ae4f3022c29498c33176
SHA256: 30e8d5a2813f72886aa72d886f4a36ab4038363f5f3bcef02f4937fb6a0342d3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pbh5tools is a collection of tools that can manipulate the content or extract data from h5 files, that contain alignment information (cmp.h5) and files that contain base-call information (bas.h5 and pls.h5)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pbipa-1.8.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 463129
Depends: gensoft-apptainer-1.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pbipa-1.8.0_1.0_amd64.deb
Size: 471791080
MD5sum: 128e2f6171ee9b797d62416d416486ec
SHA1: 5a5909649c16f4e674b3f6e45cc3301c76696eaf
SHA256: 374325921396952cc5c4bfb020d6522b1ed0e06811e0827a0df37d1815f885cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Improved Phased Assembler (IPA) is the official PacBio software for HiFi genome assembly. IPA was designed to utilize the accuracy of PacBio HiFi reads to produce high-quality phased genome assemblies. IPA is an end-to-end solution, starting with input reads and resulting in a polished assembly. IPA is fast, providing an easy to use local run mode or a distributed pipeline for a cluster.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pbmm2-1.7.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7790
Depends: libc6, gensoft-gcc-9.2.0, zlin1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pbmm2-1.7.0_1.0_amd64.deb
Size: 2909668
MD5sum: 3947e2d023847c05df30491eafe7e398
SHA1: ba4d446b6ac94ff8cfde3af58a7901c8c1768063
SHA256: 6d701a731212455e715c70a8a9ef0a8bc112e23f22b07a89e3498fef132a4292
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A minimap2 frontend for PacBio native data formats
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pbsuite-15.8.24
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 149332
Depends: mawk, gensoft-adm-python-2.7.17, libc6, gensoft-blasr-5.3.3, gensoft-samtools-0.1.19
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pbsuite-15.8.24_1.0_amd64.deb
Size: 42496016
MD5sum: 27d1318f2369a88c66740c2295a52237
SHA1: 20753bb121a01ef43b869ccec5ef82a7aa54f38a
SHA256: 76fa6947b2dee4e52bb0c05d4da77b6c0047493933d0b7f43df1c40ab1b615f5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PBJelly is a highly automated pipeline that aligns long sequencing reads (such as PacBio RS reads or long 454 reads in fasta format) to high-confidence draft assembles.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pbzip2-1.1.13
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 250
Depends: libc6, gensoft-gcc-9.2.0, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pbzip2-1.1.13_1.0_amd64.deb
Size: 107386
MD5sum: 2a4eb845f9a4697c168fbdb9469a4a6c
SHA1: 9e010ec5eb10ef2b80466682cdec3d7f239f2f7f
SHA256: c12078fccd09f60f7e0f1499cd3df837fe87d5a8895c2bb63376efed54971810
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PBZIP2 is a parallel implementation of the bzip2 block-sorting file compressor that uses pthreads and achieves near-linear speedup on SMP machines. The output of this version is fully compatible with bzip2 v1.0.2 or newer.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pcma-2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 361
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pcma-2.0_1.0_amd64.deb
Size: 169740
MD5sum: d84b5cae1c4549796430a760762884a4
SHA1: 7bb4e470e8f5948d092af0aae24272627093abb7
SHA256: afc1dbe924561d7d6e9b0fb0253443e677b195c8053bfdfad6166c19800e0752
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Profile Consistency Multiple sequence Alignment) is a progressive multiple sequence alignment program that combines two different alignment strategies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pcre-8.43
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5531
Depends: libbz2-1.0, libtinfo5, libc6, libreadline8, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pcre-8.43_1.0_amd64.deb
Size: 1753300
MD5sum: af1479d686c6c6aa75ae3e5c2bd08d7f
SHA1: abbcfa2f314e5ec0a9f7b36611d32db5b9ae9a2a
SHA256: 85a20b943ca06ec233ea7d20404d19b62814e50c4a9a7b3abd49b3ac06922c09
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pcre2-10.34
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4749
Depends: zlib1g, libbz2-1.0, libtinfo5, libc6, libreadline8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pcre2-10.34_1.0_amd64.deb
Size: 1473832
MD5sum: 9a397a1c378d5992d2c2ff7ba604fad5
SHA1: 5af59dfc958bbeca750f7bdb16e9ce8795586bf4
SHA256: 96d035305a195b612f42b077054e80881ab348b355a3935cab28e46064fbb9b1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pdb-lib-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 128
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pdb-lib-1.0_1.0_amd64.deb
Size: 33562
MD5sum: c0d6c0059b490cc43119e8165c97efa3
SHA1: c810cdd0f3e797042a7f431ac2c201014768a623
SHA256: cafe89adc1396fa8eff316d05676ce50606bb29dd9c97acaaa0aa286340e9299
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Protein structure analysis from PDB files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-peakseq-1.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 178
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-peakseq-1.3.1_1.0_amd64.deb
Size: 73414
MD5sum: 3f3c3e49ed5f072f8f21a23cc7db1820
SHA1: 59850d7ef9e26f0e81a636a3e63a3eade337bad3
SHA256: ae22990bc507ba66b70c2a138bb0e636a54bbbb878681c9694e50b32127c59eb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program for identifying and ranking peak regions in ChIP-Seq experiments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pear-0.9.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 718
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pear-0.9.10_1.0_amd64.deb
Size: 78532
MD5sum: 249371fb06b89004a08d8e2c80686ed9
SHA1: dc5e945e9fc59cec87b9f2dfc4be0d997a2d6ab8
SHA256: 04ef9d4cd243adb0b4f963da69df8d8fc57f4a2e08e615d1a8d40c3ebbec259c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Paired-End reAd mergeR. PEAR is an ultrafast, memory-efficient and highly accurate pair-end read merger. It is fully parallelized and can run with as low as just a few kilobytes of memory
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pear-0.9.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 726
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pear-0.9.11_1.0_amd64.deb
Size: 80366
MD5sum: 1b43493e66b0b5aedf54f668b3aa6569
SHA1: f828f7f11dd68ca40e51c57d306d819ed739abe5
SHA256: 55d1ae06a7244c1ba9275f3feb15177efcf7b8dfbce6909ed9f3700ca5f76937
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Paired-End reAd mergeR. PEAR is an ultrafast, memory-efficient and highly accurate pair-end read merger. It is fully parallelized and can run with as low as just a few kilobytes of memory
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pedstats-0.6.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 527
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pedstats-0.6.12_1.0_amd64.deb
Size: 230046
MD5sum: 0b716f943d2a008cb77c7df42b669eb2
SHA1: e4bfb03f2cc66739645fe8e8699d856049fb95b4
SHA256: a0cfda1cebaf9afbe6273ad1f963d8dde4bf9d21339bb382510bb38740dc7be3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A tool for quick validation and summary of any pair of pedigree and data files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-penncnv-2009.08.27
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 121389
Depends: gensoft-ghostscript-9.50, libc6, libdb5.3, gensoft-r-3.6.2, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-penncnv-2009.08.27_1.0_amd64.deb
Size: 48405674
MD5sum: f865d6eee9174a308ab1e28978e66d9e
SHA1: aec40af4581e95073bc2fbe36ca72095de9a49d8
SHA256: 347399984d8ffe9fe22a8797947fa4cb27cd0443e861d392e16122261846d2d5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: CNV detection from Illumina whole-genome SNP genotyping arrays. It has been extended to handle candidate gene SNP arrays, to handle recent high-density arrays with non-polymorphic markers (so-called CN markers), and to handle Affymetrix genome-wide arrays
License: unknown
Vendor: Institut Pasteur

Package: gensoft-perl-5.30.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 71777
Depends: zlib1g, gensoft-db-18.1.32, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-perl-5.30.1_1.0_amd64.deb
Size: 18686714
MD5sum: ea7b86a31df5ea31bac7521c02599e4e
SHA1: 80d2755271164cb7e1adaba5e9444e785f9fa6c6
SHA256: a81bffbb473fa437d43bb9f17d3c9f376ca281deb52a81257961fadb5d551fd9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Perl 5 is a highly capable, feature-rich programming language with over 27 years of development
License: unknown
Vendor: Institut Pasteur

Package: gensoft-perl-5.36.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 76076
Depends: gensoft-db-18.1.32, libcrypt1, libc6, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-perl-5.36.0_1.0_amd64.deb
Size: 19659938
MD5sum: 6cfb0eb53a41f44026d747ba84a09a4c
SHA1: f43b88b953418be2f22a4c54c5a696c2334d972b
SHA256: a6300f73ffc83e841272827e0c98f3689f6f98380e547870ae423812fbefe16c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Perl 5 is a highly capable, feature-rich programming language with over 27 years of development
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pf1-tools-0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 92433
Depends: libc6, gensoft-adm-perl-5.30.1, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pf1-tools-0.1_1.0_amd64.deb
Size: 24802122
MD5sum: daebf6aae73bfe8d3555cc223fe78d22
SHA1: 56b7d5cd1122498cf6ce9941de9b666afece287e
SHA256: 5adf1aab1e52a76b76a87a936da1e7549677e396120438c5bf53ca52253e39f3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: small scripts used at PF1
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pftool-1.12-beta
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 3380
Depends: gensoft-adm-python-2.7.17, libc6, gensoft-openmpi-4.0.5, zlib1g, libssl1.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pftool-1.12-beta_1.0_amd64.deb
Size: 1003086
MD5sum: 5bdf5dce29961d076312ca3a458b46e6
SHA1: 496165c70f254d16ea115889abe0f1ce46217ade
SHA256: 58024bb51e5ee72027c53038e3fed3c2a88b02dbe3d00c22cd85e6a8c40fa43f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PFTool (Parallel File Tool) can stat, copy, and compare files in parallel.  Its optimized for an HPC workload and uses MPI for message passing.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pftools-2.3.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 940
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pftools-2.3.5_1.0_amd64.deb
Size: 362596
MD5sum: f676afae239103692bde4c8672106977
SHA1: ff2a0f7ae3fbe6312e4477831ccd48328ddb7b5c
SHA256: 6a440f8ec7a3615f1ae1a5911902d0fe39fdd5014ae59a91193fee2710af5896
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The pftools package contains programs for generalized profile applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pftools-3.2.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 56904
Depends: libc6, zlib1g, gensoft-pcre-8.43, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pftools-3.2.5_1.0_amd64.deb
Size: 28478438
MD5sum: c98c615fe97a8c89e9fac12b93e0ff4e
SHA1: a09ab81d032ae5e01fb8b1300cb923c14bb43c3a
SHA256: 874c9b7cc9c34b70c4f7583e239e3f5861e2d2ada8834ca0c747f78d5b0edcc9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The pftools package contains programs for generalized profile applications
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pgap-2021-05-19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1136940
Depends: gensoft-singularity-3.7.3, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pgap-2021-05-19_1.0_amd64.deb
Size: 1153037630
MD5sum: 8ff53026cc0fa18d9a7be47fe9cd7f51
SHA1: bc4017f46a8ca6094d5ecb804c31141c01b4c62a
SHA256: fd6a2da9dadc4c6742fe6b4f0de6cc76b417a8f21cb936f09b5ea72bf4fe79fb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and archaeal genomes (chromosomes and plasmids).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pgap-2022-08-11
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1232874
Depends: gensoft-adm-python-3.8.1, gensoft-singularity-3.7.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pgap-2022-08-11_1.0_amd64.deb
Size: 1250007958
MD5sum: 21f3da33a8a45f89c3e2d89fc7d2a03f
SHA1: c7c926002304ffb0058047c5324847c4c14f4e46
SHA256: 17df15a6a02f268cc28c7c559290665cad153e9e8b1d10fdab27a8018bae6b7f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and archaeal genomes (chromosomes and plasmids).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pgap-2022-10-03
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1634419
Depends: gensoft-adm-python-3.8.1, gensoft-singularity-3.7.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pgap-2022-10-03_1.0_amd64.deb
Size: 1657805532
MD5sum: 524aa3460d484f5f2609aeafc37dd7c3
SHA1: 2a0240073b2755ebfb7c2d597a654328f673bbbf
SHA256: 26a3c70d46257b4e9eeadb577b72872aebf55179fcebfa2292204b4f353347bd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The NCBI Prokaryotic Genome Annotation Pipeline is designed to annotate bacterial and archaeal genomes (chromosomes and plasmids).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pggb-0.2.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 23
Depends: gensoft-seqwish-0.7.3, gensoft-vg-1.37.0, gensoft-smoothxg-0.6.1, gensoft-wfmash-0.7.0, gensoft-odgi-0.6.3, gensoft-gfaffix-0.1.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pggb-0.2.0_1.0_amd64.deb
Size: 8506
MD5sum: 36fd67844d61520ea0840bb47af02cee
SHA1: eec1b89be675c369efde14a5b2c44277fddfe679
SHA256: 1a4a46e328505c9ce3221e54b30a875b7e823af53230e70fe750bab2de79b646
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pangenome graph construction pipeline that renders a collection of sequences into a pangenome graph (in the variation graph model).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pggb-0.3.1
Version: 2.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 27
Depends: gensoft-smoothxg-0.6.5, gensoft-seqwish-0.7.6, gensoft-gfaffix-0.1.2.4, gensoft-wfmash-0.9.1, gensoft-vg-1.37.0, bc, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pggb-0.3.1_2.0_amd64.deb
Size: 9500
MD5sum: b23b134320b777780c4c3f7d5602f616
SHA1: 135b6477529be039d1c597f8fd2d695417b14b92
SHA256: c33d6a231122fe177cd1ebc8ee44960e12ef6cf4809c318e1834d5b7cbc4e4e2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pangenome graph construction pipeline that renders a collection of sequences into a pangenome graph (in the variation graph model).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pggb-0.4.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 34
Depends: gensoft-wfmash-0.9.1, gensoft-odgi-0.7.3, gensoft-vg-1.37.0, bc, gensoft-seqwish-0.7.6, gensoft-samtools-1.10, gensoft-gfaffix-0.1.2.4, gensoft-smoothxg-0.6.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pggb-0.4.1_1.0_amd64.deb
Size: 11146
MD5sum: 1ef4634d74a9d2bb7934f9db0b3cc321
SHA1: 1d565e6cf53cada12b225d042da9fdc04732a8b3
SHA256: 5dd871ee00005188a8e6efd0bf816fc0f685c2d1d3717f61fc9d4f77f43b22be
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pangenome graph construction pipeline that renders a collection of sequences into a pangenome graph (in the variation graph model).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pggb-0.5.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 36
Depends: gensoft-wfmash-0.10.2, gensoft-vg-1.37.0, gensoft-odgi-0.7.3, gensoft-smoothxg-0.6.8, gensoft-gfaffix-0.1.2.4, gensoft-samtools-1.16, gensoft-seqwish-0.7.6, bc
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pggb-0.5.3_1.0_amd64.deb
Size: 11842
MD5sum: e44f544081916885e4ae9effdb56fd22
SHA1: 8ac5c47b99d7e065576761683c16cc7a1a0ef4b5
SHA256: ee6ab337d64c32c05d5c894a66ea642966021150ee2c65fedc43bc1badc137a9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pangenome graph construction pipeline that renders a collection of sequences into a pangenome graph (in the variation graph model).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pgp-tools-0.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pgp-tools-0.0.1_1.0_amd64.deb
Size: 3908
MD5sum: 34dd1b1a50758081704b6963944a334b
SHA1: 79a7e3970b3a249e4c84b79656ebd88660aabee4
SHA256: 09a98ac30aa07764723e9b8bd12701c02c9640893689b6f6d90cc8e812033379
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Manipulation,filter and sort NGS data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phageterm-1.0.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 329092
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phageterm-1.0.12_1.0_amd64.deb
Size: 102224858
MD5sum: df2573d1ff1bf4b985b3bbed9e084409
SHA1: 61e232093c3dd499159ccff202e1673d24f08963
SHA256: 921f04bde328cf0519768984787e59944a57fdce2ac7c86753e9c79dbd252fc6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PHAGE_TERMINI software is a tool to determine phage packaging strategy and other informations using sequencing reads (Illumina TruSeq paired-end). Phage sequencing reads from a fastq file are aligned to the phage reference genome in order to calculate two types of coverage values (Whole genome coverage and the starting position coverage).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phageterm-4.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 539785
Depends: zlib1g, libc6, libstdc++6, libgcc-s1, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phageterm-4.1_1.0_amd64.deb
Size: 168161984
MD5sum: 444004da348cb0a9b9ad5fc47a48c1af
SHA1: 26b24a136b9328f157a6fa4450e65526da3fc885
SHA256: 18979a792d77c7a0fbd57975bf12c3aa5bd1f6041633fe4df5a765ae305e58fa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PHAGE_TERMINI software is a tool to determine phage packaging strategy and other informations using sequencing reads (Illumina TruSeq paired-end). Phage sequencing reads from a fastq file are aligned to the phage reference genome in order to calculate two types of coverage values (Whole genome coverage and the starting position coverage).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phanotate-1.5.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 12359
Depends: libc6, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phanotate-1.5.0_1.0_amd64.deb
Size: 3905944
MD5sum: 42e5a543c91cb8a5e07cdd198fd0ddf6
SHA1: 3472d3469d60a2237615bd9d55a083d656eb5d0d
SHA256: e9fa6c444f9ef74565b27ac77d2e8850d89c8e71662794a90d797c2842d384ff
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This tool gets a CRISPR profile by identifying the presence of known spacers and direct repeats (DRs) in a given sequence based on a catalogue.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phantomjs-2.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 66341
Depends: gensoft-fontconfig-2.13.91, gensoft-expat-2.2.9, gensoft-libpng-1.6.37, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phantomjs-2.1.1_1.0_amd64.deb
Size: 26206510
MD5sum: 261141e014c111298e1a63a89b576779
SHA1: a188dcd1f27faff9f46bcf951f6fa3ae3cafc220
SHA256: 9a3f53cc6ba280656043442a9d9ecce43555eb74a8de5e2e1e881712d543d446
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a headless WebKit scriptable with JavaScript
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pharokka-0.1.10
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 564807
Depends: gensoft-prodigal-2.6.3.pp1, gensoft-minced-0.4.2, libgcc-s1, gensoft-adm-python-3.8.1, gensoft-trnascan-se-2.0.9, libstdc++6, gensoft-mmseqs2-13-45111, gensoft-phanotate-1.5.0, zlib1g, gensoft-aragorn-1.2.38, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pharokka-0.1.10_2.0_amd64.deb
Size: 134999240
MD5sum: 6d2276f0d99777fc81337c01dd091de3
SHA1: 81015851531e7f1423c7d8c13a95205eb97c3443
SHA256: b912a2640b43c3a4ce8e58b2fd684406c0d240d5fd73dc8ee78c755057b7c754
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pharokka is designed for rapid standardised annotation of bacteriophages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pharokka-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 604061
Depends: libstdc++6, gensoft-aragorn-1.2.38, gensoft-minced-0.4.2, gensoft-trnascan-se-2.0.9, gensoft-phanotate-1.5.0, gensoft-adm-python-3.8.1, libgcc-s1, zlib1g, gensoft-prodigal-2.6.3.pp1, gensoft-mmseqs2-13-45111, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pharokka-1.1.0_1.0_amd64.deb
Size: 149933022
MD5sum: f3440f1765358be8d1a1502b5af45a40
SHA1: ae7864433d419943dcc5e5cd6bebae3f8ebc65ab
SHA256: 8c380ef1efc4a86ba105c5b9647e171e3ae738de962ced84de897a16fb073a51
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pharokka is designed for rapid standardised annotation of bacteriophages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pharokka-1.2.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 851867
Depends: gensoft-phanotate-1.5.0, gensoft-aragorn-1.2.41, libc6, libgcc-s1, libstdc++6, gensoft-adm-python-3.8.1, gensoft-minced-0.4.2, gensoft-trnascan-se-2.0.9, zlib1g, gensoft-mmseqs2-13-45111, gensoft-mash-2.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pharokka-1.2.1_1.0_amd64.deb
Size: 305792322
MD5sum: 9e2a9c3f15dc9f8e60f66dfc912d6a1a
SHA1: ac2672b0a1661818957e166046f2d8314937cd1e
SHA256: 3142a454a9887e2aa20c82f400d050294ba539ef62dd394dc27213486cb0ed56
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pharokka is designed for rapid standardised annotation of bacteriophages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pharokka-1.4.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2249775
Depends: gensoft-phanotate-1.5.0, gensoft-dnaapler-0.3.1, zlib1g, libc6, libgcc-s1, gensoft-trnascan-se-2.0.9, libstdc++6, gensoft-minced-0.4.2, gensoft-mash-2.3, gensoft-adm-python-3.8.1, gensoft-aragorn-1.2.41, gensoft-mmseqs2-13-45111
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pharokka-1.4.1_1.0_amd64.deb
Size: 649120518
MD5sum: 95615de78ee16bf520523b76001bbd9a
SHA1: e1ee20362492f8711c8096114de77f39faec40f9
SHA256: 62934f97c839ef93337557ac6825ec15a3baa32f8598bd2772bf538676f391b4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pharokka is designed for rapid standardised annotation of bacteriophages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phase-2.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 893
Depends: libc6, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phase-2.1.1_1.0_amd64.deb
Size: 533346
MD5sum: 166e9efa0b84224c3af9225ca78bed44
SHA1: 14398dd3c5fea4f58d2a1955e7b27e1e5cf19477
SHA256: b682423b0668644b718e833918f1f33bd25b1cbc8a4a0da9b3c80501f577ba53
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program implementing the method for reconstructing haplotypes from population data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phast-1.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 28511
Depends: libc6, gensoft-gcc-9.2.0, gensoft-lapack-3.9.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phast-1.5_1.0_amd64.deb
Size: 11995660
MD5sum: b97d6a38d2f70dc3ff3fa29486307610
SHA1: c81cad946daaac6d746702079b03b24c7f54c3ac
SHA256: 4ef8630192fbf18ab0a394b75574568ea3423ba5539a5b3c3850ef7aefdfa8e9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PHylogenetic Analysis with Space-Time models
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phast-1.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 33667
Depends: gensoft-lapack-3.9.0, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phast-1.6_1.0_amd64.deb
Size: 14504674
MD5sum: 88aa97d132b547e828849715eae2cce6
SHA1: e28b18cb36112154a3b919f05c55ac6d082dde26
SHA256: 0d8c1878f5b4a2d3c2b143f734557adfdeaa27f50a5d33a2efb722d8fa2eb551
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PHylogenetic Analysis with Space-Time models
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phigaro-2.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1799083
Depends: libgcc-s1, libstdc++6, gensoft-adm-python-3.8.1, gensoft-prodigal-2.6.3, gensoft-hmmer-3.3, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phigaro-2.2.1_1.0_amd64.deb
Size: 534977878
MD5sum: b79b5f55e3f75c5d1900281752fbf424
SHA1: d4c6697027c8c97f263bc7a0a959a99ca69a3b4a
SHA256: 2c5a5d57dd64cb825f7d0d8b2e2686d99a6302f5c27d4b453ed61fdf7dd323c5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Phigaro is a scalable command-line tool for predictions phages and prophages from nucleid acid sequences (including metagenomes) and is based on phage genes HMMs and a smoothing window algorithm.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phipack-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 295
Depends: gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phipack-1.0_1.0_amd64.deb
Size: 187126
MD5sum: 86234e9ad2bc6b721b230eb4c7a69982
SHA1: e9459971b22cca8e2760bd58d241f0e0f26d3d3d
SHA256: 2cd53de71179330408397efcff491df2dd829881dd0ea0ff3108f784d96db51a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Simple, rapid, and statistically efficient test for recombination.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phrap-1.090518
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1484
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phrap-1.090518_1.0_amd64.deb
Size: 715168
MD5sum: 64723ab7b61841f46dd751578964e61d
SHA1: 92c42317c21917d27be5e14ef793da4230c52329
SHA256: 2f42ba6dbd458a3817e4136de0cf022123cc19083f4f430c0cf213ede0922f01
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program for assembling shotgun DNA sequence data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phred-071220.b
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1320
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phred-071220.b_1.0_amd64.deb
Size: 306774
MD5sum: 61bdc422be5f68d78994d28ee5aecdc1
SHA1: d24834af5e950dec8004a8640282c5b1ac265493
SHA256: 1d33af38126c71863fdffdc32c0693038eb87df3688738a32455a918e123e51f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The phred software reads DNA sequencing trace files, calls bases, and assigns a quality value to each called base
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phylip-3.67
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 6137
Depends: gensoft-xorg-libs-1.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phylip-3.67_1.0_amd64.deb
Size: 2678378
MD5sum: 0b2daa422ba139599deeb948779a98a2
SHA1: 5b237267d7850df1e5cc670e46b7d1fb6e49988b
SHA256: 60a13ea03a2e2caf88d6391710ea0a5c7ef7276f0532c1181e2aa72516bafcaa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A package of programs for inferring phylogenies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phylobayes-4.1c
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30408
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phylobayes-4.1c_1.0_amd64.deb
Size: 13772944
MD5sum: 7a79dbc21fce7fd183d99b1caf518763
SHA1: bd7bd37fb961b55f5345dd6485bdaf164ce9b503
SHA256: 6b859a03b0082f5ead0290d38264907be379c4f37bad65d6fabf0821e391f952
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A Bayesian Monte Carlo Markov Chain (MCMC) sampler for phylogenetic reconstruction using protein alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phylobayes-mpi-1.8b
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9050
Depends: libc6, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phylobayes-mpi-1.8b_1.0_amd64.deb
Size: 3067406
MD5sum: 0087849359591a5ab276f7ff885f27ed
SHA1: b40cc68e634fbec7c58aa3cfea490e021a97a787
SHA256: b34c1b33da8940f5c224298ba447568a64f882e2ae2c60b2c8b3e464bdaac801
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A Bayesian Monte Carlo Markov Chain (MCMC) sampler for phylogenetic reconstruction using protein alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phyloflash-3.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 77748
Depends: gensoft-bbmap-38.79, gensoft-mafft-7.467, gensoft-hmmer-3.3, gensoft-r-3.6.2, gensoft-vsearch-2.14.2, libc6, gensoft-gcc-9.2.0, gensoft-spades-3.14.1, gawk, gensoft-adm-perl-5.30.1, grep, gensoft-bedtools-2.29.2, gensoft-sortmerna-2.1b
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phyloflash-3.4_1.0_amd64.deb
Size: 32076422
MD5sum: a4487a5c759aeeb9cd365df72badff15
SHA1: b355b64217e8a5a47510cd379bd27e613e17f71f
SHA256: 74ca547c3b2e435190459037fe3253106748efdccdb33e40de35735274c98d30
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A pipeline to rapidly reconstruct the SSU rRNAs and explore phylogenetic composition of an illumina (meta)genomic dataset.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phylophlan-3.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 286647
Depends: gensoft-blast+-2.10.1, libc6, gensoft-raxml-8.2.12, gensoft-iq-tree-1.6.12, gensoft-fasttree-2.1.11, gensoft-mash-2.2, gensoft-muscle-3.8.1551, gensoft-adm-python-3.8.1, gensoft-diamond-2.0.6, gensoft-trimal-1.4.1, gensoft-mafft-7.467
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phylophlan-3.0.2_1.0_amd64.deb
Size: 92243866
MD5sum: 55ce9b5dd6b5f287471c95a3436feb28
SHA1: 006a40e4dc365bc4cfd5d9941bc6ce541f8d8e65
SHA256: ea37dc4ad20d2f3ad510ad8d032d7b9eef98cff6a3dfc1927aa5aa6d4a90ac98
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phyml-3.0.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1358
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phyml-3.0.1_1.0_amd64.deb
Size: 684188
MD5sum: 534335c7ab3cdf22d655e40d3651606e
SHA1: fed2ac409ed8c1c50e64993c0af03f69b3fac09f
SHA256: 91b30c68b29f8b7b987d3b53e12aab66ebdc03da864b307fd4e98be872ccdf37
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phyml-3.3.20190909
Version: 2.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 4655
Depends: gensoft-openmpi-4.0.5, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phyml-3.3.20190909_2.0_amd64.deb
Size: 2892444
MD5sum: fc38832f116fce99a92b6121f4643f16
SHA1: 8cfb059f9853b836f487bb5533ec60a395d321df
SHA256: c35deb6c7b84a44d31da50c313ba54595ee39ce8a4a708b1f565d757dcb93b4e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phyml-bayes-3.0.1b
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2061
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phyml-bayes-3.0.1b_1.0_amd64.deb
Size: 1113430
MD5sum: bc659dee0791fc2317b176f9671379b8
SHA1: 7e6d3393571037c1d7295658de57b479671f8048
SHA256: 32b7ada634aa4df85bf150c2c8033f6d3c918ff127e14d45221f9feef0ee351f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PhyML with aBayes branches support algorithm
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phyml-cat-3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 998
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phyml-cat-3.0_1.0_amd64.deb
Size: 495552
MD5sum: a4b59a4430f6bb59cf30ef65aad2efda
SHA1: 49eb2e9edb4b272427f58126407e9d90af9f59ba
SHA256: 7336039c56a77a9480ca739b39e3f68d66fab1734381e91c28b4dff814200f42
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PhyML with structure based models
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phyml-sms-1.8.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2163
Depends: gensoft-r-3.6.2, libc6, bc
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phyml-sms-1.8.1_1.0_amd64.deb
Size: 1161608
MD5sum: c250c85a6bb485660591c57e362a4cb5
SHA1: c841d676e5202173f4ab7c98fa255b5f61849607
SHA256: 08fa567e4e7f8a0843a4e1a2a62e352b1a98b1f105fb1cea577d862cc6ff8868
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SMS determines the evolutionary model which best fits the input data in order to infer a phylogenetic tree. It evaluates the models according to a criterion to select the best model. This criterion  can  be  the  AIC   (Aikake  Information  Criterion  )  or the  BIC   (Bayesian  Information Criterion).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-phyml-structure-na
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 908
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-phyml-structure-na_1.0_amd64.deb
Size: 458920
MD5sum: 67ea51223f0dce385d688949fe9e5ba0
SHA1: 8e32b1b7279b63887485eec73fa32061a7e08fd9
SHA256: 1d62e84e4d9b7ab09624c5d07548e07b041f7dd8dc8a4b9ce2b0a1e1f4f79a07
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: maximum-likelihood framework phylogenetic mixture models
License: unknown
Vendor: Institut Pasteur

Package: gensoft-picard-tools-1.94
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 45420
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-r-3.6.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-picard-tools-1.94_1.0_amd64.deb
Size: 42609326
MD5sum: 54b765693e0151d2e94be2cf6906dd84
SHA1: 0c8ec7b554621f74156ac8e314b522ba3a9e0c14
SHA256: b95a2152a9bf57ed9a1697960743039fdcafcc364266ba74ed947bdf28d73794
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: command-line utilities that manipulate SAM files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-picard-tools-2.22.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 17111
Depends: gensoft-r-3.6.2, gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-picard-tools-2.22.0_1.0_amd64.deb
Size: 16232164
MD5sum: 7e491e957f13d04bb251e9c2412b9547
SHA1: 26aa7dccd5e053edde849e6c784cdb383c664d35
SHA256: 4ad77d579f19b67cbee380c05036a5e516544f1d500e01a3f5816bf43514397c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: command-line utilities that manipulate SAM files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-picard-tools-2.23.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 35002
Depends: gensoft-r-3.6.2, gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-picard-tools-2.23.3_1.0_amd64.deb
Size: 33196738
MD5sum: fa07e1c8c3ceba9a762eef2c470d5f9b
SHA1: a8fb9c27a3f73c08ee6aa4011e8d5cf66951bc74
SHA256: f7461cd46ac3d2c713e49649d9e6be1b7533a5fb937b9e58a24e5725bd6d7f06
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: command-line utilities that manipulate SAM files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-picrust2-2.5.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 465300
Depends: gensoft-gappa-0.8.3, gensoft-hmmer-3.2.1, gensoft-r-4.2.1, gensoft-epa-ng-0.3.8, gensoft-glpk-4.65, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-picrust2-2.5.1_1.0_amd64.deb
Size: 218955242
MD5sum: 6dceecf129a3ec92eeb6c54f046aea49
SHA1: e691b3caf88d0a21f3f4427984b9decaf11e2795
SHA256: 095b64ce26f840348af6852f573247299a6dc82508d9c01fc6d4d289262ec827
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PICRUSt2 (Phylogenetic Investigation of Communities by Reconstruction of Unobserved States) is a software for predicting functional abundances based only on marker gene sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-piggy-1.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 73
Depends: gensoft-mafft-7.453, gensoft-adm-perl-5.30.1, gensoft-parallel-20200222, gensoft-cd-hit-4.8.1, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-piggy-1.5_1.0_amd64.deb
Size: 17736
MD5sum: 6a11a3b48862485426272baaaefec7a8
SHA1: 984898cacbb835b89ed780ddde0b7ba734eb1eb1
SHA256: 33488a947a6ad26020411ff7a28bcebaaab6c5cc39393a9bcd6f389742cd1a76
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Piggy is a tool for analysing the intergenic component of bacterial genomes. It is designed to be used in conjunction with Roary
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pigz-2.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 299
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pigz-2.4_1.0_amd64.deb
Size: 147252
MD5sum: 1b14996cc8c98d0e260f4433baf54cb1
SHA1: 347767f3587063fd2ddb9eeb4de26da9522aca7c
SHA256: 5327434029d9dd6eb7a3285785adf9d103d9d3695f3c2ef635f0df1dd49682ce
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pigz, which stands for Parallel Implementation of GZip, is a fully functional replacement for gzip that exploits multiple processors and multiple cores to the hilt when compressing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pilercr-1.06
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 268
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pilercr-1.06_1.0_amd64.deb
Size: 134800
MD5sum: 48c5ccf69be9544169d5d9fe082b2387
SHA1: 6fc08fc8daab32958e7288cc1e19921fd420912c
SHA256: 66f07e613848d6f6e7f34fc62bb35bc1df4b3997daccf8310581b699916b7d9f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Identification and analysis of CRISPR repeats.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pilon-1.23
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7216
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pilon-1.23_1.0_amd64.deb
Size: 6852682
MD5sum: 7794f76c172b5b21b39f6e526df58e78
SHA1: 2806eed9a979544908c68058affd2317171a5600
SHA256: 2c853772c18ad7a2b9e8b7c9dbdce9fc0edfb2b46203cf3eb8b4caa2afac8fa1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pilon is a software tool which can be used to automatically improve draft assemblies, find variation among strains, including large event detection
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pima-1.40
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 932
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pima-1.40_1.0_amd64.deb
Size: 273860
MD5sum: a2f6027ed4df65b5347bde00d008c0a8
SHA1: 9c8bdc2bb1a3b14125fadab66b8a9201671babd4
SHA256: de3e4d13fce5a3977957ea25d9e6a31ed43d83d704d2c0490bf7ee6687bf8666
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pattern-Induced Multi-sequence Alignment program. Performs a multi-sequence alignment of a set of (presumably related) sequences using an extension of our covering pattern construction algorithm
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pindel-0.2.5b8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 27310
Depends: zlib1g, libc6, gensoft-gcc-9.2.0, gensoft-htslib-1.10, gensoft-curl-7.68.0, gensoft-xz-5.2.4, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pindel-0.2.5b8_1.0_amd64.deb
Size: 6580948
MD5sum: 69f96cadca6c0a0ec3b06d193a52ac0d
SHA1: b18ceae0f3ea4db3a67be870ea0d171481201efe
SHA256: ded14856e145b67ed3b79dd5dc1e368617fd6c0bc31a40eb862cc48d6c198453
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pipeviewer-1.6.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 101
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pipeviewer-1.6.6_1.0_amd64.deb
Size: 41552
MD5sum: 09e492746f789110d1a7c3a06c3f78ac
SHA1: 92ee96bf325764e99b753c1978bff433854659ea
SHA256: 4f8627ed63979fb084a53dffb2aa75aa9a89017c0239542edd736acdf7f23a32
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a terminal-based tool for monitoring the progress of data through a pipeline.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pixman-0.38.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 23699
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pixman-0.38.4_1.0_amd64.deb
Size: 5002524
MD5sum: b8886286e0ca230664d883d9b8708261
SHA1: c86fe71da8051959fbf9509d0d4233fa85df784e
SHA256: 6b6360113718889a694f5669316c3d1b9936c03f2bf07ef196c0d9723159acaa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pixman is a library that provides low-level pixel manipulation features such as image compositing and trapezoid rasterization.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pkg-config-0.29.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2295
Depends: libc6, libbz2-1.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pkg-config-0.29.2_1.0_amd64.deb
Size: 805978
MD5sum: a7a21637b1cba5d873a92516bcc46aa2
SHA1: f6c86f849962e1e8db1e2e2be1ce85e98a572b9d
SHA256: 80331751e47437aa16c02b30a4b6b4b1306074ed0477aa558deeadb371c72e65
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pkg-config is a helper tool used when compiling applications and libraries.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-plascope-1.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1817669
Depends: gensoft-spades-3.14.0, bash, gensoft-centrifuge-1.0.4-beta
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-plascope-1.3.1_1.0_amd64.deb
Size: 703684826
MD5sum: 98c830fa98aab25cba5b2e987baba443
SHA1: 147abdaa4787d21a05f7b3a2334fc4f9cf6e41d5
SHA256: fecd60349744c32c2c64daf4e04d6777ade72e4fa6a47fb9a1d62ae52073f808
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: contigs classification from a WGS assembly according to their location (i.e. plasmid or chromosome). It
License: unknown
Vendor: Institut Pasteur

Package: gensoft-plasmidfinder-2.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 85430
Depends: libc6, gensoft-adm-python-3.8.1, gensoft-blast+-2.10.0, gensoft-kma-1.3.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-plasmidfinder-2.1.1_1.0_amd64.deb
Size: 25101974
MD5sum: 52ed85b48ee1f84b653b218f91862bfd
SHA1: 70f91f19c6cbe3a31e2e6b0b77c61578418551b5
SHA256: 096cb46dcd037bc9a4e0736b7af58c43383b70ab7c572f347302dd3ed103d180
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PlasmidFinder identifies plasmids in total or partial sequenced isolates of bacteria.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-plasx-0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 525908
Depends: gensoft-adm-python-3.8.1, gensoft-mmseqs2-10-6d92c, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-plasx-0.1_1.0_amd64.deb
Size: 165764956
MD5sum: 1bde6bae818d3ffe814039743242009a
SHA1: 549dbc5c1bce32a0fede3810f3eadb0ded02ade6
SHA256: f5b7ae1aab7a09021e96dc857673c5f5fd5bfa429982f123d25d1d39c29fdd89
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a machine learning classifier for identifying plasmid sequences based on genetic architecture
License: unknown
Vendor: Institut Pasteur

Package: gensoft-platanus-v1.2.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2360
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-platanus-v1.2.4_1.0_amd64.deb
Size: 1092132
MD5sum: 09ad4ab272ce13d8685160f7160e73ac
SHA1: 16d46ab344cdaa8e5f940f474ee371e8e05d1531
SHA256: c8c146ff87560a5aca0a5aea13237061fde43081eddade528b313cecc72cc77c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PLATform for Assembling NUcleotide Sequences Platanus is a novel de novo sequence assembler that can reconstruct genomic sequences of highly heterozygous diploids from massively parallel shotgun sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-platon-1.6
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2925398
Depends: libc6, gensoft-diamond-2.0.6, gensoft-prodigal-2.6.3.pp1, gensoft-adm-python-3.8.1, gensoft-infernal-1.1.4, gensoft-hmmer-3.3, gensoft-mummer-4.0.0rc1, gensoft-blast+-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-platon-1.6_2.0_amd64.deb
Size: 1717104736
MD5sum: 71e1979a6156d55bd047b0c906787843
SHA1: 4c5b24d215bde2f6b709a584d7b483e07ba65111
SHA256: 729697692687f485b69a752254eecb041515715852bb7f736e43d5a6681a829a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: identification and characterization of bacterial plasmid contigs from short-read draft assemblies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-platypus-0.8.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 19816
Depends: gensoft-curl-7.68.0, libc6, zlib1g, gensoft-htslib-1.10, gensoft-xz-5.2.4, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-platypus-0.8.1_1.0_amd64.deb
Size: 6072040
MD5sum: a45709164610eb7b1b4c4bf85d3a9bb1
SHA1: 0167e5148e74287c251f44a1e5f569c97804c99a
SHA256: 811613aabb5c47ab7173cb78944221546633e93751c54ebd087bb90158a0a793
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Platypus is a tool designed for efficient and accurate variant-detection in high-throughput sequencing data. Platypus can detect SNPs, MNPs, short indels, replacements and (using the assembly option) deletions up to several kb.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-plink-1.07
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3419
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-plink-1.07_1.0_amd64.deb
Size: 1474062
MD5sum: 562baba7a52cbc3d66c0d88a81311a28
SHA1: e74aa0f8c0c122534178933fda327fddd69f40a1
SHA256: 5ed26d411e2adfac64c596f346c14364e899bbc0591c65eba65dd61f3027c02e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Analysis of genotype/phenotype data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-plink-1.90b6.16
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 40680
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-plink-1.90b6.16_1.0_amd64.deb
Size: 8898118
MD5sum: f5592a8b7f4fd8766b5ba5638fe800c5
SHA1: a52eb186b5bf0e41b619c1e7946c347767d4c17e
SHA256: 0988f063acbdbf35a920d1b11a188e661d0bbfadfd85420df26fea5a54a5d696
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Analysis of genotype/phenotype data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-plink-1.90p
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 11263
Depends: gensoft-blas-3.8.0, libc6, zlib1g, gensoft-gcc-9.2.0, gensoft-atlas-3.10.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-plink-1.90p_1.0_amd64.deb
Size: 3944722
MD5sum: e17bacfd9a60d591e33c0ac68d2e9263
SHA1: feedea65d2abf4f5c86e9be68068deabfa024c9d
SHA256: f80288ac1828d37c2153105d8c6d6b69e8c7a7f72fa98f27c8e9db7832d8afe7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Analysis of genotype/phenotype data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-plink-2.00a3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 30867
Depends: gensoft-lapack-3.10.0, gensoft-atlas-3.10.2, zlib1g, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-plink-2.00a3_1.0_amd64.deb
Size: 9392636
MD5sum: 3805637c7e9fde40084fc97890233643
SHA1: 4dd5afd5d78667b3806af88448127ef7cb4b706a
SHA256: f021abadc5c8b0b564278f09b2dbc5747a34740c361451f9171be2b05c226c07
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Analysis of genotype/phenotype data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-plumed-2.7.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 33183
Depends: gensoft-openmpi-4.0.5, gensoft-lapack-3.9.0, zlib1g, gensoft-gsl-2.6, gensoft-boost-1.72.0, gensoft-fftw-3.3.8, gensoft-blas-3.8.0, gensoft-xdrfile-1.1.4, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-plumed-2.7.2_1.0_amd64.deb
Size: 8002404
MD5sum: ef47266de5abdb238fd73588dd9300b1
SHA1: eef6fba76e903437087974c8e6ebe4aeba1dad44
SHA256: 8fc8f50631760e9f117dee47ce591b2fcf120e88c5bb37be5711a15b159eafd3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an open-source, community-developed library that provides a wide range of different methods, which include enhanced-sampling algorithms free-energy methods tools to analyze the vast amounts of data produced by molecular dynamics (MD) simulations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-poa-v2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 214
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-poa-v2_1.0_amd64.deb
Size: 75688
MD5sum: 88543abf3b1373baa19fdc3d5da531d4
SHA1: c09019f319d00ea1a66c720c7fe23953da62cf64
SHA256: 0e3b8585a8d387c1756cb8d7064a84bac6034804e012d5e59856000a5edc0ecb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: POA is Partial Order Alignment, a fast program for multiple sequence alignment in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pod5-0.2.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 272068
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pod5-0.2.4_1.0_amd64.deb
Size: 84259104
MD5sum: 207ea0780b25b0e43b9872fa464c8416
SHA1: a99e8f5187e966b41af0785f5145740511d11068
SHA256: 378510a7184766ed30df9ac59e3a5c0b3f7c5cfd55b027ccd0bdcfc510eee36c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pod5 - a high performance file format for nanopore reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pointfinder-3.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 133943
Depends: gensoft-blast+-2.10.0, libc6, gensoft-kma-1.2.22, libgcc-s1, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pointfinder-3.1.1_1.0_amd64.deb
Size: 28004070
MD5sum: 5d03e4adf9476b59d86731fe0a21e6e0
SHA1: f9da5bc725664936030c07c59edbf08200854ea4
SHA256: 661becc55fc9c56de9ff4e05e03c4c2627f41292fafb4b2991de5756cc6762af
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The PointFinder service contains one python script PointFinder.py which is the script of the latest version of the PointFinder service. The method detects chromosomal mutations predictive of drug resistance based on WGS data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-polypolish-0.5.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 6247
Depends: zlib1g, libc6, gensoft-adm-python-3.8.1, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-polypolish-0.5.0_1.0_amd64.deb
Size: 1786962
MD5sum: 6382bd9c37794aca41d7d093b789ae89
SHA1: c297408c07c12455c7dd2e3765494cf83db5cd58
SHA256: c36b5c03625771b85103cee1ebe0ff40e9a4c45b19925d2ab32ae6f2cd9ab888
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a short-read polishing tool for long-read assemblies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-popoolationte2-v1.10.03
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3477
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-popoolationte2-v1.10.03_1.0_amd64.deb
Size: 1562432
MD5sum: b06594b3e8a3639ce4065c8599ee1515
SHA1: 239fa256cddebfc77270f333e144615587f0d5f4
SHA256: 4bb255cad8908cb8e453bbbcecf59996cdefc642f7bce96b20703c32673d7697
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: enables comparative population genomics of transposable elements (TE). As a major innovation PoPoolation TE2 introduces the physical pileup file which allows to homogenize the power to identify TEs and thus enables an unbiased comparison of TE abundance between samples, where samples could be pooled populations, tissues or sequenced individuals
License: unknown
Vendor: Institut Pasteur

Package: gensoft-poppler-23.02.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 57116
Depends: gensoft-xorg-libs-1.1, gensoft-openjpeg-2.3.1, gensoft-gcc-9.2.0, zlib1g, gensoft-expat-2.4.1, gensoft-libtiff-4.1.0, gensoft-libjpeg-turbo-2.0.6, libgcc-s1, gensoft-fontconfig-2.13.91, gensoft-cairo-1.17.4, libbz2-1.0, gensoft-pixman-0.38.4, gensoft-libpng-1.6.37, gensoft-xz-5.2.5, libc6, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-poppler-23.02.0_1.0_amd64.deb
Size: 18774692
MD5sum: 34e54d3d93a06d5da521bbd4d8c61772
SHA1: bbea2c9a1ca04e9b6c7adc008bf4a0c4dda95ce6
SHA256: ede62440f9ecc49b2dddceaa299f824a86649c6e89321b430ea693c436696019
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Poppler is a PDF rendering library based on the xpdf-3.0 code base.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-poppunk-2.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 500655
Depends: gensoft-mash-2.2, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-poppunk-2.0.2_1.0_amd64.deb
Size: 157550378
MD5sum: 5f37f0e17f20f6d7319b33437aa56970
SHA1: 4a09ef8bdb51e56ec6f1df61ade479175a1284ca
SHA256: da9931db68af839dd5223405b2ba66258dea4c5ef212d97f0deb9953bb9871e5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Population partitioning using nucleotide k-mers
License: unknown
Vendor: Institut Pasteur

Package: gensoft-popscle-0.1-beta
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 726
Depends: libc6, gensoft-xz-5.2.4, gensoft-htslib-1.10, zlib1g, gensoft-curl-7.68.0, libbz2-1.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-popscle-0.1-beta_1.0_amd64.deb
Size: 294788
MD5sum: b1449b655436d0a40a378ca64429a6e1
SHA1: 43ff733443ac630aae9c06fcb2206dc1cc03e660
SHA256: 243c8c3fd489cd62e6878ffbbadd1f76f5fe5539b50f517cf0aa4647e703ce48
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and auxilary tools
License: unknown
Vendor: Institut Pasteur

Package: gensoft-porechop-0.2.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9073
Depends: libc6, gensoft-gcc-9.2.0, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-porechop-0.2.4_1.0_amd64.deb
Size: 2682274
MD5sum: 4132de021af4f8f1d4a0360a75da2b8f
SHA1: f7bd24a776f41c3a1d693449b5665fbb528c484a
SHA256: beb5c8cdf419b617537817d3a3b929f7bc4874b8a3028ab8add4f98714fac1e6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-postgresql-12.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 38870
Depends: libc6, libreadline6, zlib1g, libssl1.1, libtinfo5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-postgresql-12.1_1.0_amd64.deb
Size: 11453478
MD5sum: 41dc2ed1859e97a6eb19046d60616193
SHA1: 55c0de998e637d1158e14f898d2868f23963ff76
SHA256: ca69d60fe72c18f2404d8b978dde4201ee3729a7a5beaad647175bf20e32cadd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an object-relational database management system (ORDBMS)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-powerfit-2.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 277400
Depends: libstdc++6, gensoft-adm-python-2.7.17, libgcc-s1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-powerfit-2.0.0_1.0_amd64.deb
Size: 68612178
MD5sum: 415e49e29a2462d0b78feaecd3f3e6cd
SHA1: 119da7620820e4c9ae83e4c3f0a5058e874b3189
SHA256: f18df724a48a3b5ffa63ffc522c90a49b429330468e79810d047f721ccaa4990
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rigid body fitting of atomic strucures in cryo-electron microscopy density maps
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ppanggolin-1.1.96
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 414803
Depends: gensoft-mmseqs2-13-45111, gensoft-gcc-9.2.0, libc6, gensoft-xz-5.2.5, gensoft-mpfr-4.0.2, libquadmath0, libgcc-s1, gensoft-r-3.6.2, libstdc++6, gensoft-adm-python-3.8.1, libpcre2-8-0, libgfortran5, zlib1g, gensoft-gmp-6.2.0, gensoft-mpc-1.1.0, gensoft-aragorn-1.2.38, gensoft-infernal-1.1.4, gensoft-prodigal-2.6.3.pp1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ppanggolin-1.1.96_2.0_amd64.deb
Size: 123903128
MD5sum: 9e93648fa624ed8f6d50b886c0407635
SHA1: e5171c7de30b54b5cb84d53e0d9bf9373474e5ba
SHA256: 715dd420660aa17a833e434d3c2a44ef94d6f90b03919dda6d8799d198c1fc6d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software suite used to create and manipulate prokaryotic pangenomes from a set of either genomic DNA sequences or provided genome annotations
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pplacer-v1.1-alpha19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 148949
Depends: gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pplacer-v1.1-alpha19_1.0_amd64.deb
Size: 44277914
MD5sum: cbf15137a10842ff48b02da64e6ad4cf
SHA1: 149112e3b0c580c362a3399ebc5c5d41c8d88673
SHA256: 70e3c8251e3eeeccfdea04ba2e0bf548b2d4b95759aeb4c7d3c269107062d66b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pplacer suite of programs. pplacer places reads on a phylogenetic tree. guppy (Grand Unified Phylogenetic Placement Yanalyzer) yanalyzes them. rppr is a helpful tool for working with reference packages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prank-170427
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1188
Depends: gensoft-gcc-9.2.0, libc6, gensoft-bppsuite-2.2.0, gensoft-exonerate-2.4.0, gensoft-mafft-7.453
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prank-170427_1.0_amd64.deb
Size: 475328
MD5sum: f83e45da73c332276f6564bb298ace35
SHA1: cfa76b13c13007fd1227a6802683226ddec28816
SHA256: 9e659e71acab0458b05ee861a9ead0dd90f9379b5ec5cd094f1c2f28fc423d74
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. Its based on a novel algorithm that treats insertions correctly and avoids over-estimation of the number of deletion events. In addition, PRANK borrows ideas from maximum likelihood methods used in phylogenetics and correctly takes into account the evolutionary distances between sequences. Lastly, PRANK allows for defining a potential structure for sequences to be aligned and then, simultaneously with the alignment, predicts the locations of structural units in the sequences. These pages aim to explain how to install and use PRANK.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pratt-2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 152
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pratt-2.1_1.0_amd64.deb
Size: 71062
MD5sum: 81aed0273c0baa3db4714eaf36b95d80
SHA1: 960170b9c386e8e03461753af2c06b1811ee4522
SHA256: 00e4cd404175f290b5c15b6793d9963fad0f89eb2c6204cb333fe540edb41753
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pattern discovery tool.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-predator-2.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 980
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-predator-2.1.2_1.0_amd64.deb
Size: 313458
MD5sum: ad0430bff778acb4af91bb92e3678c2c
SHA1: 67b13659d8844916f261b540834d2d3d6358b41f
SHA256: a5e95a69fcef34a4f1e8a47401c768f2bed16569eabe708220d495e0d1b2b2e5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Protein secondary structure prediction software
License: unknown
Vendor: Institut Pasteur

Package: gensoft-preseq-3.2.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 2034
Depends: libbz2-1.0, gensoft-gcc-9.2.0, gensoft-htslib-1.16, gensoft-xz-5.2.5, zlib1g, gensoft-curl-7.68.0, libc6, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-preseq-3.2.0_1.0_amd64.deb
Size: 1420070
MD5sum: b1992e47f8f3e05eaa84b4c7e8ffa267
SHA1: d1ff2c3503bb251cd73203975bf8680d546bc90d
SHA256: 751e91d051558fa7320c073c53dab30d262dad168037bb0ab67e4cb8102b04af
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Software for predicting library complexity and genome coverage in high-throughput sequencing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-primer3-2.4.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1896
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-primer3-2.4.0_1.0_amd64.deb
Size: 674866
MD5sum: 356993cc84f880fc33967c4d21d860db
SHA1: 2f15b787546bb7355d1e20d643f754bf6f38e902
SHA256: f0784da73378ee0f3e68f5bed8606c4164936b6f26d37ae682df679e9bb237c5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PCR primer design tool
License: unknown
Vendor: Institut Pasteur

Package: gensoft-primo-na
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 69
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-primo-na_1.0_amd64.deb
Size: 27896
MD5sum: 10f44858472e4fc391e2f5f4ea1b9d63
SHA1: 2767d7af4dce24f686661cd0c33c3e0139b1e0e6
SHA256: fc3525d7ca60cc1f78956a2178e04d6204f477500f608b4b07af65c762c98953
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Primer design software (mostly derived from primer 0.5)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-primux-20.07.2014
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 35517
Depends: gensoft-adm-python-2.7.17, csh, gensoft-vmatch-2.3.1, libc6, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-primux-20.07.2014_1.0_amd64.deb
Size: 9851720
MD5sum: 2bf0e838c1c4b8980ffd6ea09a1f1cf8
SHA1: 2fce10d3c81d5a49f6af498456f46b14879ef0bc
SHA256: 6e666431673e458d3f6dd4b054cb123733884d52553c24602d43e97fb0bd7562
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PriMux is a new software package for selecting multiplex compatible, degenerate primers and probes to detect diverse targets such as viruses.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prinseq-0.20.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3383
Depends: gensoft-xorg-libs-1.1, zlib1g, gensoft-fontconfig-2.13.91, gensoft-adm-perl-5.30.1, gensoft-cairo-1.16.0, gensoft-freetype-2.10.1, libbz2-1.0, gensoft-expat-2.2.9, libc6, gensoft-pixman-0.38.4, gensoft-libpng-1.6.37
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prinseq-0.20.4_1.0_amd64.deb
Size: 973506
MD5sum: a68daf7e01d8dc4f89779453430a27b1
SHA1: 42a1099f23646b10bfec3c338873505d3fb15e18
SHA256: f641cccda93f94ba0f636b62b90a246e3fd76ec957546864a76c593195adc8bc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PRINSEQ can be used to filter, reformat, or trim your genomic and metagenomic sequence data. It generates summary statistics of your sequences in graphical and tabular format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prism-1.1.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 80614
Depends: zlib1g, gensoft-bwa-0.7.17, gensoft-shrimp-2.2.3, libc6, gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prism-1.1.6_1.0_amd64.deb
Size: 22274096
MD5sum: 0123ca7b99ad1340f3ee550d8204bbae
SHA1: 98d1260bcd08ecbcea8990a4056c605aa96a3cf1
SHA256: 4736e86fb116762c94f10c48a9f3699c51d9f4294e3b35b384ba758472611e17
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software for split read (reads which span across a structrual variant -- SV ) mapping and SV calling from the mapping result. PRISM is able to detect small insertions and abitrary size deletions, inversions and tandom duplications with the direction of discordant read pairs. PRISM_CTX is a tool for detecting inter-chromosome trans-location events.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-probcons-1.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 420
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-probcons-1.12_1.0_amd64.deb
Size: 218166
MD5sum: 9acbbf97637e62517ca748404c3dbdb8
SHA1: 4cf536d427e9b2d7f9039382a8d2567688922113
SHA256: 7896709ea932fc24f2a9fbd87fb7a812ec1b79bcdda6429ea7de548d8d37a97d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PROBCONS is an efficient protein multiple sequence alignment program, which has demonstrated a statistically significant improvement in accuracy compared to several leading alignment tools.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-probconsrna-1.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 348
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-probconsrna-1.12_1.0_amd64.deb
Size: 158104
MD5sum: 9052be95c7d5cf8fd05fadfecb6a306d
SHA1: e62e88ad805d5aa277d3dc8bbaebd12add0f4df7
SHA256: 289870f21dfcdacfd3f581eee5cc8f3e6051b0e038386b663ed37f5ed5ad9c8d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Probabilistic Consistency-based Multiple Alignment of Nucleotide Sequences. probconsRNA is an experimental version of PROBCONS with parameters estimated via unsupervised training on BRAliBASE II
License: unknown
Vendor: Institut Pasteur

Package: gensoft-proda-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 881
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-proda-1.0_1.0_amd64.deb
Size: 364988
MD5sum: f8879c9d00248651af206ddb74676f0c
SHA1: 346120f0f43f161683f7aae95875601a0e056062
SHA256: 079dcd8afed0188376dbd8951eb00e8b10d544f17a36c9e12350008ca9d0f018
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: multiple alignment of protein sequences with repeated and shuffled elements.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prodigal-2.6.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 11860
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prodigal-2.6.3_1.0_amd64.deb
Size: 975026
MD5sum: 413ed39e03c2eaf8a12e51f7751e1996
SHA1: 7ddb04202ae440a1387dfe23a574a8bbd8785fbc
SHA256: b3a8c7a1365a9906c200ed6824627ab604d3cb96881f1941c19360af01011620
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prodigal-2.6.3.pp1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 11861
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prodigal-2.6.3.pp1_1.0_amd64.deb
Size: 975538
MD5sum: 2b7e14d9e8cffc0e7fe1ada099605ce2
SHA1: 91111863048d3a795a47d749f1b064381fdd459b
SHA256: c6f5874e6cb8f08cb6af6dd7a3f297001403bbaf44479e58352e357ef9bd8266
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prodigal-gv-2.9.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 15984
Depends: libc6, zlib1g, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prodigal-gv-2.9.0_1.0_amd64.deb
Size: 1172174
MD5sum: a1b53e2042268e33d3a4eb4ce33d4a92
SHA1: 7d21e322d2e5e6b94a843a0813cbce2a3c3daca5
SHA256: 4eba7338f4c9ac428d2eda50752ce6da11a06a50d63cb855c7efd748ec450530
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A fork of Prodigal meant to improve gene calling for giant viruses and viruses that use alternative genetic codes. It includes ten models added to the metagenome mode
License: unknown
Vendor: Institut Pasteur

Package: gensoft-proj-7.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 249404
Depends: libc6, gensoft-curl-7.68.0, gensoft-libtiff-4.1.0, gensoft-sqlite-3.31.0, gensoft-gcc-9.2.0, gensoft-xz-5.2.4, gensoft-libjpeg-turbo-2.0.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-proj-7.0.0_1.0_amd64.deb
Size: 51388012
MD5sum: 1da9f4ce08816249f904710cdbdc418c
SHA1: f644d77b627cbaf7bf44ebf0ee47c112297144ee
SHA256: cc3e161d98596bb8031da192de5916174d499c29235ff62194ba2b837762091b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PROJ is a generic coordinate transformation software, that transforms geospatial coordinates from one coordinate reference system (CRS) to another. This includes cartographic projections as well as geodetic transformations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prokka-1.14.5
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 642917
Depends: gensoft-barrnap-0.9, gensoft-signalp-4.1, libc6, zlib1g, gensoft-infernal-1.1.4, gensoft-xz-5.2.5, gensoft-blast+-2.12.0, gensoft-expat-2.4.1, gensoft-libxml2-2.9.10, gensoft-adm-perl-5.30.1, gensoft-hmmer-3.3, gensoft-minced-0.4.2, libssl1.1, gensoft-aragorn-1.2.38, gensoft-ncbitools-20170106, gensoft-libiconv-1.16, gensoft-prodigal-2.6.3.pp1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prokka-1.14.5_2.0_amd64.deb
Size: 229612534
MD5sum: a1bd68db6870f08559d6fc8b7afebc5b
SHA1: 843b037a503b7e3ad045e30cb5711f203ccecf52
SHA256: 99b2f24e1b38a2033785f0bdbab23c3393019dbce542a5c6e272590a8aed59a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software tool for the rapid annotation of prokaryotic genomes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-proovread-2.14.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 23405
Depends: libc6, gensoft-samtools-1.10, gensoft-blast+-2.10.0, gensoft-shrimp-2.2.3, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-proovread-2.14.1_1.0_amd64.deb
Size: 6811562
MD5sum: bf9e368b3871fadee2337f7d9f4ec93b
SHA1: 4114cf7faf404d501c9889df6fdc5088d9c5bccb
SHA256: e9c0143e370da271ff149f19ddc3bdb5997847399467c0a596a677a19cf4a652
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Large-scale high accuracy PacBio correction through iterative short read consensus (Illumina).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prose-0.02a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 82
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prose-0.02a_1.0_amd64.deb
Size: 31508
MD5sum: d3178cfb033d95d0aaaa93364c9139ba
SHA1: ea3f2382c0cbe7abeb6816c94834a1c52f38a3b8
SHA256: a3aeac1b02645ed21417d8dca8c12ba7f55e80ae6de9c6732243b1868de1ffb3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Search for Prosite patterns in protein sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prothint-2.6.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 3772
Depends: gensoft-genemark-4.30, zlib1g, gensoft-diamond-0.9.30, libc6, gensoft-adm-perl-5.30.1, gensoft-adm-python-3.8.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prothint-2.6.0_1.0_amd64.deb
Size: 1253884
MD5sum: 50bdd9d8afc12154a7b8605ae7f5c84e
SHA1: bffea6857621bf5769fcaba84766b1210ffb272d
SHA256: b8ac9cd27c62e701b91ed7b153647393e6a86bb1013fec8446a994b65230778c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Protein hint generation pipeline for gene finding in eukaryotic genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-protobuf-3.11.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 527388
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-protobuf-3.11.3_1.0_amd64.deb
Size: 105930162
MD5sum: c922b5491c5a120c5111976e5e342fd6
SHA1: b9b82c7d82d7d6a598d6a31775615f27154f6f23
SHA256: 534b46dda20ec32eac71d4b63f80c477edd53f0e1c778c21b9c22cfbb74f53f6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Protocol Buffers (a.k.a., protobuf) are Google s language-neutral, platform-neutral, extensible mechanism for serializing structured data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prottest-2.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3309
Depends: gensoft-graalvm-ce-java8-20.0.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prottest-2.4_1.0_amd64.deb
Size: 1730346
MD5sum: 875ccc36f58df17957345fd94c655d20
SHA1: 1e0d040fb369b67b22764e1bccd1aa9eee7bb6ef
SHA256: 5c81848d83ec7dca2a046e6c01fa1ae08c714f13cef52a3407b4427e7653c6aa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PROTTEST (ModelTest relative) is a program based on Phyml for selecting the model of protein evolution that best fits a given set of sequences (alignment).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-prunier-2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 29671
Depends: gensoft-raxml-8.2.12
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-prunier-2.1_1.0_amd64.deb
Size: 8715590
MD5sum: 8c9f1f732f28883aa0743363cf8c75d7
SHA1: a7ad1b3020ed089551fd0f329f1354b1ee365de3
SHA256: b87505f45579502ea0336278ee2478d5a55a60123647b30b5b6eb0bc23eafbb6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pseudofinder-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 301940
Depends: libc6, gensoft-adm-python-3.8.1, gensoft-blast+-2.12.0, gensoft-diamond-2.0.15, gensoft-pal2nal-14.1, libgcc-s1, libstdc++6, zlib1g, gensoft-muscle-3.8.1551, gensoft-hmmer-3.3.2, gensoft-paml-4.9j
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pseudofinder-1.1.0_1.0_amd64.deb
Size: 83762118
MD5sum: ab2a049f6e96115435b633bd5d7483a8
SHA1: ac861812a010a2ca10e05cdc8feaf906a86ac1af
SHA256: 177f55814b35d5aa8619747c27350864cc09ffdac9a37e5837aaa3ca703ff3c3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a bioinformatics tool that detects pseudogene candidates from annotated genbank files of bacterial and archaeal genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-psipred-4.02
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 36032
Depends: gensoft-blast-2.2.26, gensoft-blast+-2.10.0, libc6, tcsh
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-psipred-4.02_1.0_amd64.deb
Size: 14803124
MD5sum: ba4c94d45a7428f83f3e9db19380d7b5
SHA1: 2cd35f7e7c570e453b0ac45d94f0723150c5c5e0
SHA256: eca1cc6259c11a2b7a48e97189d43c9fbae8f4627f4e6aaf1021bba526eb2922
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PSIPRED is a  simple and accurate secondary structure prediction method, incorporating two feed-forward neural networks which perform an analysis on output obtained from PSI-BLAST (Position Specific Iterated - BLAST). Using a very stringent cross validation method to evaluate the methods performance
License: unknown
Vendor: Institut Pasteur

Package: gensoft-psort-981201
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1462
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-psort-981201_1.0_amd64.deb
Size: 473708
MD5sum: b4456ce69b3174436a1937803d4b919f
SHA1: 895cba2378d338fc97d76520785ac7dcbd2efc7a
SHA256: 44791fe0674a0aef27f831ca8c864ec01f6b108c0a93f8616f9a21ab33c60ce9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program for the prediction of protein localization sites in cells
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pstreams-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1190
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pstreams-1.0.1_1.0_amd64.deb
Size: 212588
MD5sum: b9314bef25fcdec3aa3506d2a9215a4b
SHA1: 112ff325369d719a93efc379ebd76a67680b4473
SHA256: b9159451835801509b8ab7dcaf0ebfdd37c6bda58fcf5a2790751ad40fc148d8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A C++ IOStream-based replacement for popen(), allowing I/O on all of the child process stdin, stdout and stderr
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ptools-0.99d
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 533
Depends: zlib1g, gensoft-bwa-0.7.17, gensoft-bowtie2-2.3.5.1, gensoft-taxoptimizer-2.0, gensoft-igblast-1.15.0, gensoft-cutadapt-1.9.1, gensoft-blast-2.2.26, libc6, gensoft-openmpi-4.0.5, gensoft-genomeanalysistk-3.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ptools-0.99d_1.0_amd64.deb
Size: 141410
MD5sum: 3f0b99ee446499acb16468a579e1618c
SHA1: baa2753df39eb3e10492a9e643b92239c9f344fd
SHA256: cf3461e3f79c6fc183926bb6597f0bf1d31cd79f5a2a14f22beb1d59567f8866
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Parallel versions of various tools
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pullseq-1.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 220
Depends: gensoft-pcre-8.43, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pullseq-1.0.2_1.0_amd64.deb
Size: 77942
MD5sum: 57c674892c3bf03f867d9e0faec70664
SHA1: 82a19494afaca6aa78d618eeffa02918b378ad2c
SHA256: 59108d37c80e25373c614471612fd9f6c81a7c47a4028dd7837d2d65bc4a3368
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Software to extract sequence from a fasta or fastq. Also filter sequences by a minimum length or maximum length.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-puzzle-5.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1430
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-puzzle-5.2_1.0_amd64.deb
Size: 796364
MD5sum: faeee0717d24c8bcf7747edb890efb6c
SHA1: 5e533bb688699903f540d55a2d580c96445191d8
SHA256: 74504633379be7fd095c9d133454c538e111a24aff3b9ce6b63a8a6721b2895e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A computer program to reconstruct phylogenetic trees from molecular sequence data by maximum likelihood
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pyani-0.2.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 282951
Depends: gensoft-mummer-3.23, gensoft-blast+-2.10.0, gensoft-blast-2.2.26, libc6, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pyani-0.2.10_1.0_amd64.deb
Size: 91266554
MD5sum: b1c0aa94937330a3f8f3a63c5affb6fe
SHA1: 66649096f348ab1ab7b95eded9c243b93296af38
SHA256: ca403d1643ffbadd7651a2213b61daf689c36f9cc02a3acf5a8e0dffd20ac1e1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pyani is a Python3 module and script that provides support for calculating average nucleotide identity (ANI) and related measures for whole genome comparisons, and rendering relevant graphical summary output.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pycoqc-2.5.0.23
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 372234
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pycoqc-2.5.0.23_1.0_amd64.deb
Size: 108499124
MD5sum: 126208080216b93a2b64791c69f83ac3
SHA1: 14cfb8ca7668d5f96620114e0ce3e8b2b30daf05
SHA256: 9c200f917c359cb8e4c145760798722ae2f019628f83fbc36a03a86d3661b3ea
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pycrac-1.5.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 121190
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pycrac-1.5.0_1.0_amd64.deb
Size: 38339478
MD5sum: 1a4f98e95a0680a6856352edeea1e546
SHA1: 3abb710a9002259a82e38d0cc217faf03b46a77e
SHA256: fb26aac334a4797130c1e6909507105dfeff980b190a40a5a5657291be48401c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python software for processing CRAC and CLIP type data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pydnase-0.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 201995
Depends: gensoft-adm-python-3.8.1, gensoft-bedtools-2.29.2, gensoft-xz-5.2.4, libstdc++6, gensoft-samtools-1.10, zlib1g, libc6, libgcc-s1, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pydnase-0.3.0_1.0_amd64.deb
Size: 69413386
MD5sum: cf77d5de1565128a5abfbf0d399ebd4c
SHA1: 5e218d341156c437a67e2dd3b89e77a57343bbcb
SHA256: 3d798af547081f045c2690ed19da4eab7e77354eb0393d0d7714b8bd266d741f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pyDNase is a suite of tools for analysing DNase-seq data - pyDNase comes with several analysis scripts covering several common use cases of DNase-seq analysis, and also an implementation of the Wellington, Wellington 1D, and Wellington-boostrap footprinting algorithms.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pyfastx-0.8.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 9493
Depends: gensoft-sqlite-3.31.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pyfastx-0.8.4_1.0_amd64.deb
Size: 2808940
MD5sum: 16383345d2f1f482ebd685242ae6baf0
SHA1: ee875f1d9c6c1641c83f03b215aee6cff251a821
SHA256: 5321598c983701ef755a7fddad9b6ab73bdc8e36f04c4e7c2e8eb0cd8b181a19
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pypy-2.7-v7.3.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 225961
Depends: gensoft-freetype-2.10.1, gensoft-gcc-9.2.0, gensoft-expat-2.2.9, gensoft-atlas-3.10.2, gensoft-libpng-1.6.37, gensoft-fontconfig-2.13.91, gensoft-xorg-libs-1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pypy-2.7-v7.3.3_1.0_amd64.deb
Size: 65491298
MD5sum: 7aba2ae3858a764240504ba4852eeff6
SHA1: a3cf0665bc0f50a17efe94fa9a0516356b969848
SHA256: bca713badcaaea68610d6002597735b0cc45293ddd4fff93a4768f6f44b252ae
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: PyPy is an interpreter that implements the Python programming language, based on the RPython compiler framework for dynamic language implementations. This package includes numpy and scipy
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pyseer-1.3.10
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 470053
Depends: libstdc++6, libgcc-s1, libc6, gensoft-bwa-0.7.17, gensoft-bedtools-2.29.2, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-bedops-2.4.37, gensoft-adm-python-3.8.1, zlib1g, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pyseer-1.3.10_1.0_amd64.deb
Size: 157289814
MD5sum: fe2bd50f081e08533716c8ce1d5b2108
SHA1: 0ece3eb459c9bc77acddbe70d355a4726c6270ea
SHA256: dba6724934cfe31d6bf434abcc18de68175b65eadb0b2cf0d8251336d4947c75
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pyseer is a python reimplementation of seer, which was written in C++. pyseer uses linear models with fixed or mixed effects to estimate the effect of genetic variation in a bacterial population on a phenotype of interest, while accounting for potentially very strong confounding population structure. This allows for genome-wide association studies (GWAS) to be performed in clonal organisms such as bacteria and viruses.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pyseer-1.3.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 425288
Depends: gensoft-bedops-2.4.37, gensoft-bwa-0.7.17, zlib1g, gensoft-bedtools-2.29.2, libc6, libgcc-s1, gensoft-adm-python-3.8.1, libstdc++6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pyseer-1.3.3_1.0_amd64.deb
Size: 144286044
MD5sum: 3fc87bed8ce6f7401cde682835798bdd
SHA1: a657eac5c560b6fc48a75185ef2e2e49a31f09ea
SHA256: 520054bd2381ce6e34eed2d856d80af33a57b8127fb897be9b4141d7e58878ff
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pyseer is a python reimplementation of seer, which was written in C++. pyseer uses linear models with fixed or mixed effects to estimate the effect of genetic variation in a bacterial population on a phenotype of interest, while accounting for potentially very strong confounding population structure. This allows for genome-wide association studies (GWAS) to be performed in clonal organisms such as bacteria and viruses.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-pyseer-1.3.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 475460
Depends: zlib1g, gensoft-gcc-9.2.0, libc6, libssl1.1, libbz2-1.0, gensoft-adm-python-3.8.1, gensoft-bwa-0.7.17, gensoft-bedtools-2.29.2, gensoft-bedops-2.4.37
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-pyseer-1.3.5_1.0_amd64.deb
Size: 154340040
MD5sum: 4ff00faf1e1c31c730ed8bb3658311ad
SHA1: 0bef2447eb0297e7b3fbc8ccfce33b933acc7da3
SHA256: 90b8b19b949d25761c33affdd2c18cc3a638296250ef0c87f5d684541e8cad3a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: pyseer is a python reimplementation of seer, which was written in C++. pyseer uses linear models with fixed or mixed effects to estimate the effect of genetic variation in a bacterial population on a phenotype of interest, while accounting for potentially very strong confounding population structure. This allows for genome-wide association studies (GWAS) to be performed in clonal organisms such as bacteria and viruses.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-2.7.17
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 133216
Depends: libncurses5, libbz2-1.0, gensoft-xorg-libs-1.1, libreadline8, zlib1g, libtinfo5, gensoft-tk-8.6.10, gensoft-sqlite-3.31.0, libc6, gensoft-gdbm-1.18.1, gensoft-gcc-9.2.0, gensoft-tcl-8.6.10, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-2.7.17_1.0_amd64.deb
Size: 40615266
MD5sum: e7beaf40d0cfa144711f4c69b29ed230
SHA1: 28e47f081d00a5dcff54ae57dd9671a0c234a5b3
SHA256: 9f5be4a05fe1cdbca19c1b376a5eb403277adb80c7f7b8ec40f3fbb2bffa0902
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-3.10.13
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 272618
Depends: libtinfo6, gensoft-tcl-8.6.10, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-tk-8.6.10, gensoft-libffi-3.3, gensoft-sqlite-3.31.0, libc6, libncursesw6, gensoft-xorg-libs-1.1, zlib1g, libreadline8, gensoft-xz-5.2.5, gensoft-gdbm-1.18.1, libssl1.1, libcrypt1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-3.10.13_1.0_amd64.deb
Size: 94073582
MD5sum: c908de6295ad20f65c1ad52a05e97b71
SHA1: 97dd0ef2695908cceea78d32274a26199beebfdc
SHA256: 1f9884420eda56c34ddffe5c9df0a3b7b40e81dfb6011d5148f626d52cc1217b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-3.10.7
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 277514
Depends: gensoft-gdbm-1.18.1, gensoft-tk-8.6.10, libc6, gensoft-libffi-3.3, libssl1.1, gensoft-xorg-libs-1.1, libcrypt1, gensoft-gcc-9.2.0, libncursesw6, libtinfo6, libbz2-1.0, libreadline8, zlib1g, gensoft-sqlite-3.31.0, gensoft-xz-5.2.5, gensoft-tcl-8.6.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-3.10.7_1.0_amd64.deb
Size: 98950636
MD5sum: 2eea7fdb9814db46c2fa7924043988f7
SHA1: 3413dd19dc69b4f439bb2cbf2475b74982889de0
SHA256: 2e3b210d1388c06b4c8b7e78a033c6e45416fc8e0b7826ebb108ce9c59f333ef
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-3.11.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 397187
Depends: gensoft-tk-8.6.10, gensoft-gcc-9.2.0, libreadline8, zlib1g, gensoft-xorg-libs-1.1, gensoft-xz-5.2.5, libcrypt1, gensoft-gdbm-1.18.1, libtinfo6, gensoft-sqlite-3.31.0, libssl1.1, gensoft-libffi-3.3, libncursesw6, gensoft-tcl-8.6.10, libc6, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-3.11.0_1.0_amd64.deb
Size: 135601964
MD5sum: e18df0f140ff9d4caa31fa87885527b8
SHA1: b4866fb29d7c4b862cff79654b7f3f2cf1bebed9
SHA256: f292ea61ce88348430c6a45a0dd3c29adcb4fbf38b38df1392e0c8132c926a72
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-3.11.5
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 396543
Depends: gensoft-xorg-libs-1.1, libbz2-1.0, gensoft-sqlite-3.31.0, libssl1.1, libncursesw6, zlib1g, libcrypt1, libtinfo6, gensoft-tcl-8.6.10, gensoft-gdbm-1.18.1, gensoft-libffi-3.3, libreadline8, gensoft-tk-8.6.10, gensoft-xz-5.2.5, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-3.11.5_1.0_amd64.deb
Size: 131698146
MD5sum: 7425545b2dd975cd611f748308cd5582
SHA1: 73d932d62fc9516b2dafe1177925c11463468b43
SHA256: a8ede9830794200ec6c107514a1bb56eaa13ca7d99573e80b69fa20a9aab1b2f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-3.8.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 192503
Depends: libc6, gensoft-xz-5.2.4, libncurses5, gensoft-xorg-libs-1.1, gensoft-tk-8.6.10, libtinfo5, gensoft-libffi-3.3, libreadline8, libbz2-1.0, libssl1.1, zlib1g, gensoft-tcl-8.6.10, gensoft-gdbm-1.18.1, gensoft-sqlite-3.31.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-3.8.1_1.0_amd64.deb
Size: 57425466
MD5sum: 46e15909f1f67fa3d1fa70a7a57f0b6e
SHA1: ee6149871f9f718a938bef99b2475de3670de645
SHA256: 9895e2100cf040c71c914826ea91d02662fa2a94fcc0cb4c614c02314f7bcad0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-3.8.18
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 240617
Depends: gensoft-xz-5.2.5, gensoft-tk-8.6.10, gensoft-gcc-9.2.0, libreadline8, gensoft-xorg-libs-1.1, libc6, gensoft-libffi-3.3, libncurses5, libssl1.1, gensoft-gdbm-1.18.1, libbz2-1.0, libtinfo5, gensoft-tcl-8.6.10, gensoft-sqlite-3.31.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-3.8.18_1.0_amd64.deb
Size: 83920752
MD5sum: 8e7a0b39b50774d586f1ab74c2923c08
SHA1: 2d2f75c436a924a12892da59868ae0cf96d5a6a0
SHA256: a5fb17e467881da2f7a7800a0fd240547a147cced18614d2dbba79b3763ee337
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-3.8.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 232907
Depends: gensoft-sqlite-3.31.0, gensoft-gcc-9.2.0, libncurses5, gensoft-gdbm-1.18.1, libssl1.1, libreadline8, libbz2-1.0, gensoft-xorg-libs-1.1, gensoft-libffi-3.3, libc6, libtinfo5, zlib1g, gensoft-xz-5.2.4, gensoft-tk-8.6.10, gensoft-tcl-8.6.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-3.8.3_1.0_amd64.deb
Size: 80423846
MD5sum: 1bb5ec8cdf72a74f34c131e8a058faed
SHA1: e77e583ecd7911bb93cbfca371585b0ddf552485
SHA256: ffa07cc6a651e8fb017e63a0e00d14bcc7edd7421b55f2f30abc08084dc9def1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-3.9.16
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 251577
Depends: libncurses5, gensoft-libffi-3.3, zlib1g, libbz2-1.0, gensoft-sqlite-3.31.0, gensoft-xorg-libs-1.1, gensoft-xz-5.2.5, libc6, gensoft-gcc-9.2.0, libtinfo5, gensoft-tcl-8.6.10, gensoft-tk-8.6.10, libssl1.1, gensoft-gdbm-1.18.1, libreadline8
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-3.9.16_1.0_amd64.deb
Size: 86241632
MD5sum: 947812e6937526ff5583c3fdc092cf6e
SHA1: 579c5e11988a2540189b1cf6c0419d04b3404dfc
SHA256: 6294b98969edade6b9ef0e6c42011f26c65299ba68572e0d688f47a40bcf28a6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-python-3.9.18
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 251179
Depends: libtinfo5, gensoft-gcc-9.2.0, gensoft-tcl-8.6.10, gensoft-libffi-3.3, libssl1.1, zlib1g, libbz2-1.0, gensoft-gdbm-1.18.1, gensoft-sqlite-3.31.0, gensoft-xz-5.2.5, libncurses5, gensoft-tk-8.6.10, gensoft-xorg-libs-1.1, libreadline8, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-python-3.9.18_1.0_amd64.deb
Size: 86085552
MD5sum: e5b35e9ca4c0510a2d5ca9f8592f24ae
SHA1: f977b9ea539cb782a732152e2e626fb5b13c2ab7
SHA256: 5b3a8452086455b98cbc057cad34e63b5f6a19b94d8fc9a02586f566fcdc3171
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Python is a programming language that lets you work quickly and integrate systems more effectively.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qaf-demux-0.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 666
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qaf-demux-0.1.1_1.0_amd64.deb
Size: 233234
MD5sum: acc42f5d20fe43365dc280754a7a0e49
SHA1: 095fa2a132111af6f19e127262146413a732d672
SHA256: f82876e9b1cd82ca43f6ef13ec96956350d61b600b77726f836e00e4cb9a09c3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This program demultiplexes fastq data having "in-line" barcodes, based on a given list of barcodes and a barcode start position. It tries to assign each fastq record to the most likely barcode, taking into account the sequence qualities (interpreted as being sanger-encoded).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qaf-demux-0.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 849
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qaf-demux-0.1.2_1.0_amd64.deb
Size: 220168
MD5sum: f053f22d24d9b3c4f6914dce2ac4adc8
SHA1: 85599cee2b1f4d86f5d067c3cd6206e7f2fbc185
SHA256: 5f3128a00a93345c38f22394a624efb760d391a89347edf29cb1809c8b567ea7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This program demultiplexes fastq data having "in-line" barcodes, based on a given list of barcodes and a barcode start position. It tries to assign each fastq record to the most likely barcode, taking into account the sequence qualities (interpreted as being sanger-encoded).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qcat-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 238131
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qcat-1.1.0_1.0_amd64.deb
Size: 67465730
MD5sum: af79e09868fa0481fdf35c01aee10c50
SHA1: 562ad4b2199dcfe2df309583671932ed1f3ea882
SHA256: 8694be0ca9adad5fbae4dfcad31742c20a79428278202cfab7cbc552759619a0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files. It accepts basecalled FASTQ files and splits the reads into into separate FASTQ files based on their barcode. Qcat makes the demultiplexing algorithms used in albacore/guppy and EPI2ME available to be used locally with FASTQ files. Currently qcat implements the EPI2ME algorithm.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qhull-2019.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9863
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qhull-2019.1_1.0_amd64.deb
Size: 3083054
MD5sum: 22358113e0c6e057110b20dde55c29d3
SHA1: 92bbd295be180a6f98ab1408e6f5f1d7a8de28de
SHA256: 418b4d801d232d7f7516769ed72a30ab7ccaa6aae90c7e0c5ed050b08bfc987a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Qhull computes the convex hull, Delaunay triangulation, Voronoi diagram, halfspace intersection about a point, furthest-site Delaunay triangulation, and furthest-site Voronoi diagram. The source code runs in 2-d, 3-d, 4-d, and higher dimensions. Qhull implements the Quickhull algorithm for computing the convex hull. It handles roundoff errors from floating point arithmetic. It computes volumes, surface areas, and approximations to the convex hull.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qiime2-2020.11.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2251290
Depends: gensoft-singularity-3.7.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qiime2-2020.11.1_1.0_amd64.deb
Size: 2287848236
MD5sum: 5385434dba1567545b24120fd70c7f8a
SHA1: ff131f46080e12b3002178185ae121f0fc6ca887
SHA256: f85f32f52455f490c9603fc625aaccf5ba2ff2d51afacebb8d1b0230e539a08d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: QIIME 2 is a next-generation microbiome bioinformatics platform that is extensible, free, open source, and community developed.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qiime2-2022.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2871378
Depends: gensoft-apptainer-1.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qiime2-2022.2_1.0_amd64.deb
Size: 2920382408
MD5sum: 4aa9e3a7bdb988b1a1e1f15083077f5e
SHA1: ce01e4ecf34552bc534ccb58f0252b38d77a4e20
SHA256: edac0561974ec0aeccdfb059ce75296af9f834799bab3df0c07a2c9612a89c16
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: QIIME 2 is a next-generation microbiome bioinformatics platform that is extensible, free, open source, and community developed.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qrupdate-1.1.2
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Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 460
Depends: gensoft-blas-3.8.0, gensoft-gcc-9.2.0, gensoft-atlas-3.10.2, libc6, gensoft-lapack-3.9.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qrupdate-1.1.2_1.0_amd64.deb
Size: 166564
MD5sum: ddaa64532e77c561bb28874098914ccd
SHA1: bb58eeedaa8a44c285729427b4e23ec37c036e4c
SHA256: 77b692b513c4d06362d40925cc4281c0817b73fe5b2bcad37573997d5a2e0d3f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: qrupdate is a Fortran library for fast updates of QR and Cholesky decompositions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qsimscan-1.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 2649
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qsimscan-1.0_1.0_amd64.deb
Size: 838366
MD5sum: 0b656cd4a51fc5a7f1617b75d82d734c
SHA1: 77e867266ff219d3644bd063d2672c8e12b97f7c
SHA256: 57bb3e232c44312060e91bf830940d6e83c4acc6fad6153f49baadbe381de04c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Quick SIMilarity SCANner is a technology for very fast biosequence similarity search.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qt-5.12.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 152672
Depends: gensoft-libtiff-4.1.0, gensoft-glib-2.58.3, gensoft-harfbuzz-2.6.4, gensoft-freetype-2.10.1, gensoft-pcre2-10.34, gensoft-libjpeg-turbo-2.0.4, gensoft-libmng-2.0.3, libbz2-1.0, gensoft-xz-5.2.4, gensoft-fontconfig-2.13.91, libc6, gensoft-libpng-1.6.37, gensoft-xcb-util-0.3.9, gensoft-xorg-libs-1.1, gensoft-mtdev-1.1.6, gensoft-expat-2.2.9, gensoft-libxkbcommon-0.8.4, gensoft-gcc-9.2.0, gensoft-icu-65.1, gensoft-dbus-1.13.12, zlib1g, gensoft-alsa-lib-1.2.1.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qt-5.12.1_1.0_amd64.deb
Size: 53310200
MD5sum: bc24deb504542c9ad7354bd870cacb79
SHA1: fdcc3c3c665eccbae1b42655fb9a35f4dde715c4
SHA256: 1f40f7d0cdf651c91bbe5c793d1c53492b724adaf05b6b3a73573f21216c8a02
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ toolkit cross-platform application development.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-quake-0.3.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8625
Depends: libc6, gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, gensoft-r-3.6.2, zlib1g, gensoft-jellyfish-2.3.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-quake-0.3.5_1.0_amd64.deb
Size: 7417534
MD5sum: 49bcd37f82557baad195dadd79e025f6
SHA1: d20d85f6b15ba2e4359d4e5114939e6dfb6a444d
SHA256: 31e8456cef720ca03fa51b5603e279fa12d3355858169b7a21b92e1257879948
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a package to correct substitution sequencing errors in experiments with deep coverage (e.g. >15X), specifically intended for Illumina sequencing reads. Quake adopts the k-mer error correction framework, first introduced by the EULER genome assembly package.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-qualimap-v2.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 44688
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-r-3.6.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-qualimap-v2.2.1_1.0_amd64.deb
Size: 28357584
MD5sum: 5c0d8f9115a05335de950323f4b6ac77
SHA1: 35d2436f508b51e27386d8bae8f394bdbe45aaca
SHA256: d01c98f741c9321931b126a8c4bfc6e66ebb929615d84f1343f1f7a8f11a68ee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: platform-independent application to facilitate the quality control of alignment sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-quast-5.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 672225
Depends: gensoft-bwa-0.7.17, gensoft-augustus-3.3.3, gensoft-barrnap-0.9, gensoft-blast+-2.10.0, gensoft-adm-perl-5.30.1, gensoft-r-3.6.2, libc6, libstdc++6, gensoft-graalvm-ce-java8-20.0.0, gensoft-kmc-3.1.1, gensoft-sambamba-0.7.1, gensoft-hmmer-3.3, gensoft-adm-python-2.7.17, gensoft-bedtools-2.29.2, gensoft-glimmerhmm-3.0.4, libgcc-s1, gensoft-minimap2-2.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-quast-5.0.2_1.0_amd64.deb
Size: 259091324
MD5sum: 19e53cd9e01c7ce34cf705757d61dd62
SHA1: 4ddf71f6b23122b2117fbd575be835d47994b356
SHA256: d42468c27ec4ede83c60a62c7f5df887b19715bab780f991bda413e94af51dee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Quality Assessment Tool for Genome Assemblies. QUAST performs fast and convenient quality evaluation and comparison of genome assemblies.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-quicktree-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 45
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-quicktree-1.1_1.0_amd64.deb
Size: 21758
MD5sum: 380d52f15555749c96f1f4fd0c6a23be
SHA1: be86bfb42b803c2a9adb9b540a8dbc83e712fa76
SHA256: 645648e8e1941ecba589e047a8be86d5ee9e0ec0436eaec096d435dc6040f34c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program for the rapid reconstruction of phylogenies by the Neighbor-Joining method
License: unknown
Vendor: Institut Pasteur

Package: gensoft-quicktree-2.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 42
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-quicktree-2.5_1.0_amd64.deb
Size: 21256
MD5sum: 2f2fd7a023d24a5a09458b8b6fd9c010
SHA1: 656e6e330e7cd5f0210120fd94bcccba0e290584
SHA256: 3312ea1613b05476380e940cd13717b143399592b34cc6695fcfc1f28e2777c5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program for the rapid reconstruction of phylogenies by the Neighbor-Joining method
License: unknown
Vendor: Institut Pasteur

Package: gensoft-quip-1.1.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5067
Depends: gensoft-libpng-1.6.37, gensoft-gnuplot-5.2.8, gensoft-freetype-2.10.1, gensoft-xorg-libs-1.1, libbz2-1.0, gensoft-libtiff-4.1.0, gensoft-libjpeg-turbo-2.0.4, gensoft-expat-2.2.9, gensoft-fontconfig-2.13.91, zlib1g, libc6, gensoft-libgd-gd-2.2.5, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-quip-1.1.8_1.0_amd64.deb
Size: 1594506
MD5sum: 61cb86895b4f3f33ac3e6b8e11afa59b
SHA1: 707d3d8f56f3c9dad2fca866618fc2d19be5b6f7
SHA256: 0207fb9ec0480d37417b3adc4b926e3871692c470ec4327ba7dec5f67302ddfa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Quip compresses next-generation sequencing data with extreme prejudice. It supports input and output in the FASTQ and SAM/BAM formats, compressing large datasets to as little as 15% of their original size.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-r-3.6.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 166276
Depends: gensoft-atlas-3.10.2, gensoft-harfbuzz-2.6.4, libffi7, gensoft-curl-7.68.0, gensoft-tcl-8.6.10, gensoft-fontconfig-2.13.91, gensoft-libtiff-4.1.0, gensoft-cairo-1.16.0, gensoft-lapack-3.9.0, gensoft-pango-1.42.4, gensoft-libjpeg-turbo-2.0.4, libssl1.1, gensoft-libffi-3.3, libtinfo5, gensoft-gcc-9.2.0, gensoft-glib-2.58.3, gensoft-tk-8.6.10, gensoft-expat-2.2.9, gensoft-zlib-1.2.11, gensoft-pcre-8.43, gensoft-pcre2-10.34, gensoft-xorg-libs-1.1, libreadline8, gensoft-xz-5.2.4, gensoft-libpng-1.6.37, libc6, gensoft-pixman-0.38.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-r-3.6.2_1.0_amd64.deb
Size: 84121782
MD5sum: e8ac86f573d49600fa27039f50302c18
SHA1: 5e686ad3721617901ea202016c7fcc93356440d9
SHA256: 8811a73e6dbc89c867bb89b5f90e8d1929ac519c42a2e44afecdb6326595d1c5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: R A Language and Environment for Statistical Computing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-r-4.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 167809
Depends: gensoft-libpng-1.6.37, gensoft-xz-5.2.4, libbz2-1.0, gensoft-libffi-3.3, gensoft-pcre2-10.34, gensoft-cairo-1.16.0, gensoft-tcl-8.6.10, gensoft-fontconfig-2.13.91, gensoft-lapack-3.9.0, gensoft-glib-2.58.3, gensoft-tk-8.6.10, gensoft-atlas-3.10.2, gensoft-libjpeg-turbo-2.0.4, libssl1.1, gensoft-gcc-9.2.0, gensoft-expat-2.2.9, gensoft-harfbuzz-2.6.4, libc6, gensoft-xorg-libs-1.1, gensoft-pixman-0.38.4, gensoft-curl-7.68.0, zlib1g, libtinfo6, gensoft-pango-1.42.4, gensoft-libtiff-4.1.0, libreadline8, gensoft-zlib-1.2.11
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-r-4.0.2_1.0_amd64.deb
Size: 84797948
MD5sum: c38aff38820d7f547d61d48c7ac9ee59
SHA1: f652a2f60b0947e439e05c98ccfc7cd84b38d1d9
SHA256: 85202ddf3b4c98ef0f04cf0ccd7b906cc0286fb090b58787b89a3d726f9a6863
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: R A Language and Environment for Statistical Computing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-r-4.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 171244
Depends: gensoft-harfbuzz-2.6.4, gensoft-zlib-1.2.11, gensoft-cairo-1.16.0, gensoft-pixman-0.38.4, gensoft-xorg-libs-1.1, gensoft-tk-8.6.10, gensoft-curl-7.68.0, libffi7, libreadline8, gensoft-tcl-8.6.10, gensoft-libpng-1.6.37, libtinfo5, gensoft-fontconfig-2.13.91, gensoft-atlas-3.10.2, gensoft-expat-2.2.9, gensoft-libjpeg-turbo-2.0.4, gensoft-lapack-3.9.0, gensoft-xz-5.2.4, gensoft-pcre2-10.34, gensoft-glib-2.58.3, libssl1.1, gensoft-gcc-9.2.0, gensoft-libffi-3.3, gensoft-libtiff-4.1.0, gensoft-pango-1.42.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-r-4.1.0_1.0_amd64.deb
Size: 86470160
MD5sum: 7765f3b6f6fec8af4e7e4e52079066b8
SHA1: 7c27185f2fcfbcf1725ad6ed955dc93b56cb349c
SHA256: 258d243c133fae47e16eb91f6362505bb6345bdf09c2618c64d12e659678c410
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: R A Language and Environment for Statistical Computing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-r-4.2.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 176716
Depends: gensoft-libpng-1.6.37, gensoft-expat-2.4.1, gensoft-glib-2.58.3, libc6, libtinfo6, libreadline8, gensoft-xz-5.2.5, libssl1.1, gensoft-libjpeg-turbo-2.0.4, gensoft-pango-1.42.4, gensoft-atlas-3.10.2, gensoft-harfbuzz-2.6.4, gensoft-gcc-9.2.0, gensoft-curl-7.68.0, gensoft-libtiff-4.1.0, gensoft-lapack-3.9.0, gensoft-libffi-3.3, debianutils, gensoft-zlib-1.2.11, gensoft-tcl-8.6.10, gensoft-pixman-0.38.4, libbz2-1.0, zlib1g, gensoft-cairo-1.16.0, gensoft-tk-8.6.10, gensoft-xorg-libs-1.1, libfribidi0, gensoft-fontconfig-2.13.91, gensoft-pcre2-10.34
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-r-4.2.1_1.0_amd64.deb
Size: 90734478
MD5sum: 1944c77177b50230c49d33fa054aa259
SHA1: 321088b5a0360e4ad5025956f37b4b3b7a97792e
SHA256: be1e5a79c2f752a5be327019726e71fb85f05c96a1cef54e17b3329cf126df25
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: R A Language and Environment for Statistical Computing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-r-4.2.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 174705
Depends: gensoft-libffi-3.3, gensoft-openblas-0.3.21, zlib1g, gensoft-expat-2.4.1, gensoft-tcl-8.6.10, gensoft-tk-8.6.10, libc6, gensoft-glib-2.58.3, gensoft-xz-5.2.5, gensoft-xorg-libs-1.1, libtinfo6, gensoft-curl-7.68.0, gensoft-libtiff-4.1.0, libssl1.1, gensoft-libjpeg-turbo-2.0.4, gensoft-cairo-1.16.0, libreadline8, gensoft-fontconfig-2.13.91, gensoft-pango-1.42.4, gensoft-zlib-1.2.11, gensoft-libpng-1.6.37, gensoft-pixman-0.38.4, gensoft-harfbuzz-2.6.4, gensoft-gcc-9.2.0, libbz2-1.0, libfribidi0, debianutils, gensoft-pcre2-10.34
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-r-4.2.2_1.0_amd64.deb
Size: 87574798
MD5sum: 4c4e4a45bc3a1fef84a9e8d10ef97d0a
SHA1: bb74df49f88812c01c1b6cfbb36c27ec11683f84
SHA256: 4879d5b460a977026ff6dc9d414c77b3da2ef2c1e6adaecc1a987fe93c1eb6ac
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: R A Language and Environment for Statistical Computing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ra-0.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12
Depends: gensoft-rala-1.0.0, gensoft-racon-1.4.3, gensoft-adm-python-2.7.17, gensoft-minimap2-2.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ra-0.2.1_1.0_amd64.deb
Size: 4064
MD5sum: f46b4b69b73b68a1755f497c1922bd71
SHA1: e9211d45ebfea6686736335177cd43fd67d529eb
SHA256: ea6c2939d6068e4c75aea763c0990ee98d863bbed221ba65c34a03a8e7dee6a1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Ra is as a fast and easy to use assembler for raw reads generated by third generation sequencing. It consists of minimap2, Rala and Racon
License: unknown
Vendor: Institut Pasteur

Package: gensoft-racon-1.4.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1852
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-racon-1.4.3_1.0_amd64.deb
Size: 452270
MD5sum: 1bdaf941276e3e80bd1ee0ced5710d86
SHA1: 571ae3dd0b163e13e75c255854a1298370327c10
SHA256: 5454cdb4e518dd6246caeb0c94083bf2aef5d4a46652283743ea57e904dd7590
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Racon is intended as a standalone consensus module to correct raw contigs generated by rapid assembly methods which do not include a consensus step, such as Miniasm.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rafah-0.3
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5617278
Depends: gensoft-gcc-9.2.0, gensoft-prodigal-2.6.3.pp1, gensoft-hmmer-3.1b1, libssl1.1, libc6, gensoft-libxml2-2.9.10, gensoft-adm-perl-5.30.1, gensoft-r-4.1.0, gensoft-libiconv-1.16
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rafah-0.3_2.0_amd64.deb
Size: 2472953678
MD5sum: 7c3681356c2dfa3b4b9a4e05fc74b2ff
SHA1: 7040e5382d04dcc7b518d663cbdb182133a9381b
SHA256: e5e3f48fdf7ad991f8995d0859ef257d9d50a55a2dc3e8809d618df849a05b56
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RaFAH is a tool for performing in silico host predictions for viruses of Archaea and Bacteria.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ragout-2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20993
Depends: gensoft-adm-python-2.7.17, gensoft-sibelia-3.0.7, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ragout-2.2_1.0_amd64.deb
Size: 5838020
MD5sum: 368d0502bacfb5e3405d13d9ccbce076
SHA1: 4231f9ea16acff8bcf67a2caf4165a06449dab9d
SHA256: 0b01e003e4d373b3eac9c6d91ec2c6b9087f6a4df4c7c0a7ad54ff529131b257
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Ragout (Reference-Assisted Genome Ordering UTility) is a tool for chromosome-level scaffolding using multiple references.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rainbowfish-0.7.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 53748
Depends: libbz2-1.0, gensoft-boost-1.54.0, gensoft-gcc-9.2.0, gensoft-stxxl-1.4.1, zlib1g, libc6, libc6-dev, zlib1g-dev, libbz2-dev, gensoft-sdsl-lite-2.1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rainbowfish-0.7.0_1.0_amd64.deb
Size: 16670836
MD5sum: 0afb3a095ec3f3e53563cc5717bab8b9
SHA1: 04f3036276e71e9bc09d6dae1d3bb728cca80f6b
SHA256: a10cdacc0c098906445264549603d643a5dd754e274246f92b84863dac0500e4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a succinct colored de Bruijn graph,
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rala-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 471
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rala-1.0.0_1.0_amd64.deb
Size: 173594
MD5sum: 24e16ded9778552e874be37a24b976b0
SHA1: b7a70b55782d86f2a93cf7350ee044282a0d5bc1
SHA256: 6abc476eb83f2ced3d3d1d2355799c36508215219beb19bb7d952c5354f681ae
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rala is intended as a standalone layout module to assemble raw reads generated by third generation sequencing. It trims sequence adapters, purges chimeric sequences and removes repeat-induced overlaps by examining sequence pile-o-gram. Afterwards, an assembly graph is built and simplified in the default way, i.e. applied are transitive reduction, tipping and bubble popping. Leftover tangles are resolved by laying out the graph in a 2D plane with the help of the force directed placement algorithm, and long edges are removed
License: unknown
Vendor: Institut Pasteur

Package: gensoft-randomize-130926
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 358
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-randomize-130926_1.0_amd64.deb
Size: 36164
MD5sum: 2ad41abcac177cd22da776962dd62a6e
SHA1: 2626e7b9783648509057b92b8cc61140fe655699
SHA256: 08bbf9922c30cfb5ae649071c95ce2e8ff13d39e46157d85331fb5dadbc6ea53
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tool to randomize phases of a 3D map in a given resolution zone
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rapidjson-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8525
Depends: gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rapidjson-1.1.0_1.0_amd64.deb
Size: 2256916
MD5sum: 4018271d2068a45726b599b6ae3861ed
SHA1: 058bb18f7589839c2f064efdf99209ddba99a3b8
SHA256: 402dc8b79b8c3ec2cd4a7af3b205f59098d7cb4a4d1ac9c13826abc36b739dce
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A fast JSON parser/generator for C++ with both SAX/DOM style API
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rapidnj-2.3.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 272
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rapidnj-2.3.2_1.0_amd64.deb
Size: 114186
MD5sum: d5543748d7bd8c02fbbf0328c6662868
SHA1: d0f248e12356e021c5e211180503617cd567ca3d
SHA256: ea97e2a4b358a1171e3412568b00067266c683fbd711601894911580ec2872b3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RapidNJ is an algorithmic engineered implementation of canonical neighbour-joining. It uses an efficient search heuristic to speed-up the core computations of the neighbour-joining method that enables RapidNJ to outperform other state-of-the-art neighbour-joining implementations.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rapsearch-2.24
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1558
Depends: gensoft-gcc-9.2.0, gensoft-boost-1.54.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rapsearch-2.24_1.0_amd64.deb
Size: 526606
MD5sum: 2fa76371d3b77bc2f40366bc403db9f2
SHA1: 4ee10964e319e5ff849ee4a46939b1041fde99b9
SHA256: dcc62bb44e11ea80c2309e759ee578e4bc110cce68655745ef39a381354e4d10
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Reduced Alphabet based Protein similarity Search
License: unknown
Vendor: Institut Pasteur

Package: gensoft-raven-1.6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3953
Depends: gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-raven-1.6.0_1.0_amd64.deb
Size: 1371622
MD5sum: 776a26905f6656a288df52965240bb79
SHA1: f5dc7da68c9abb1d962bc7fd3e7b6ce77da6f88a
SHA256: bda8d83d653c38addf6bb8928fa470613e4e25e8fb8f9fe4331636e30ff28f05
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: De novo genome assembler for long uncorrected reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-raxml-8.2.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4103
Depends: gensoft-adm-perl-5.30.1, zlib1g, gensoft-openmpi-4.0.5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-raxml-8.2.12_1.0_amd64.deb
Size: 2327434
MD5sum: 70b5704c6a3dde6ef63798df32bda08a
SHA1: a50bba1212fa1998daf2aa94b3a4d9c0f8a67349
SHA256: 0200e5ee642998b1671fe48ed959607376c0a171028f6bbfa29716066cbd5a4b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A Program for Sequential, Parallel & Distributed Inference of Large Phylogenetic Trees (SSE3 version without Pthreads)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-raxml-ng-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3957
Depends: gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-raxml-ng-1.0.1_1.0_amd64.deb
Size: 1710814
MD5sum: 096b61b89889b1855f2b812eeec17e1e
SHA1: d60d40d71e573eb5a592c2aeb0f1d06875ab2d52
SHA256: 209d3179c3a8520d52fd178f23fb6004404ee522241b8014b953905796cf661d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. Its search heuristic is based on iteratively performing a series of Subtree Pruning and Regrafting (SPR) moves, which allows to quickly navigate to the best-known ML tree. RAxML-NG is a successor of RAxML (Stamatakis 2014) and leverages the highly optimized likelihood computation implemented in libpll (Flouri et al. 2014).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ray-2.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 62050
Depends: gensoft-openmpi-4.0.5, libbz2-1.0, zlib1g, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ray-2.3.1_1.0_amd64.deb
Size: 18533894
MD5sum: 721df507982eb305321e7915ef01d7a0
SHA1: e54bcb893af77bd18edcda89ba04738ae680ce5d
SHA256: ec022f859e1a182b209afdbe826d651a1c1dd79c1d2b7912a2e43c091a2ae58a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a parallel software that computes de novo genome assemblies with next-generation sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rbvotree-1.00
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 39
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rbvotree-1.00_1.0_amd64.deb
Size: 10238
MD5sum: 7f54ab3810fd76f4e0cef0083ef14dcb
SHA1: 2726fbcf88448901ffef61ea0ca3cf44be56de77
SHA256: 74761dd6b2f2df6dccf0b9f09d1030b9eb08d81f85d04f9b08c835deb8913399
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Report bootstrap values found with consensus program (after bootstrap analysis) on related tree found with phylogeny algorithm without bootstrap analysis
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rdkit-2021-03-4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 275073
Depends: gensoft-cairo-1.16.0, gensoft-maeparser-1.2.4, libgcc-s1, zlib1g, gensoft-expat-2.2.9, gensoft-pixman-0.38.4, gensoft-gcc-9.2.0, gensoft-libpng-1.6.37, gensoft-rdkit-2021-03-4, gensoft-freetype-2.10.1, gensoft-coordgenlibs-2.0.3, gensoft-adm-python-3.8.1, gensoft-zstd-1.4.4, gensoft-fontconfig-2.13.91, gensoft-openbabel-3.1.1, gensoft-xorg-libs-1.1, libcrypt1, libc6, libbz2-1.0, gensoft-boost-1.72.0, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rdkit-2021-03-4_1.0_amd64.deb
Size: 83462554
MD5sum: 165061d83cfbf1a75cfa3fc5ac2e135c
SHA1: 9a5051c34ee01f1da200548a366c422d0741367e
SHA256: 13de4cc66d098cb8922f3a071ca35f30595052b35f801a36df0b98f9bef29030
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RDKit is a collection of cheminformatics and machine-learning software written in C++ and Python.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rdp-classifier-2.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 539852
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rdp-classifier-2.12_1.0_amd64.deb
Size: 154731408
MD5sum: f30cb8eadd0db80c5ba01fa3af644b95
SHA1: 7f6d66da601d2a63d00f182c3c600722c3174ec3
SHA256: f3fb69d75017d115dc3fd8102466c79a369fb32d0bdef54dc55c81d77f0ea653
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a naive Bayesian classifier that can rapidly and accurately provides taxonomic assignments from domain to genus, with confidence estimates for each assignment.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rdp-classifier-2.13
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 563602
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rdp-classifier-2.13_1.0_amd64.deb
Size: 162091972
MD5sum: 3da5c57fd7589a676c36401cb6a34d4c
SHA1: 94f2291074477cc3daa6a209c309b2e38a35cede
SHA256: aad9901f4f888c3bd1c6df367f558a6f7b7c9eed370574caf726bb5fa5a4bf96
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a naive Bayesian classifier that can rapidly and accurately provides taxonomic assignments from domain to genus, with confidence estimates for each assignment.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rdptools-2.0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 571008
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rdptools-2.0.3_1.0_amd64.deb
Size: 166902870
MD5sum: 816a4b1c2f1119b9fc2c581c107b27d0
SHA1: 1ef87cc08f95e771ca0ef43dd48d9cf2e4199757
SHA256: a23b438cc0fc52b2b3280d66bd275edda10518769fe6de72790590a602cdbfda
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RDP provides quality-controlled, aligned and annotated Bacterial and Archaeal 16S rRNA sequences, and Fungal 28S rRNA sequences, and a suite of analysis tools (Classifier, Clustering, SequenceMatch, ProbeMatch, InitialProcessing, FrameBot, ReadSeq) to the scientific community.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-realphy-1.12
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 827
Depends: gensoft-raxml-8.2.12, gensoft-bowtie2-2.1.0, gensoft-phylip-3.67, gensoft-graalvm-ce-java11-20.0.0, gensoft-tree-puzzle-5.2, gensoft-phyml-3.3.20190909, gensoft-r-4.2.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-realphy-1.12_1.0_amd64.deb
Size: 810022
MD5sum: e0396d575e25f81abeced0030878a14f
SHA1: cdf8dac222c1ba3b249d752f655290cb8a5a2d38
SHA256: 38ba07d69651851c27e0927666931e3bdefe70df261c0eb61d59797b299e7f91
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Reference sequence Alignment based Phylogeny builder is a free pipeline that can infer phylogenetic trees from whole genome sequence data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-reaper-15-065
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 436
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-reaper-15-065_1.0_amd64.deb
Size: 166796
MD5sum: 0b829cbb93df1ad3664952cdfaaaa7a4
SHA1: b0773b4d4145f8bca0ebd3668938a169ae1920e8
SHA256: fc83987380bfbb79a4291aa05404999a49a3e85ce96f8e84815700a04c607465
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Reaper is a program for demultiplexing, trimming and filtering short read sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-reapr-1.0.18
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13812
Depends: zlib1g, gensoft-gcc-9.2.0, libncurses5, gensoft-adm-perl-5.30.1, libc6, libtinfo5, gensoft-r-3.6.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-reapr-1.0.18_1.0_amd64.deb
Size: 4884144
MD5sum: 3e35d381397b652d3e385a4860bb453d
SHA1: c12fa6c701a10fb4b8fa48cca5346d99e4bc2a3d
SHA256: 2ed4d0ba94396ce22a297ae257b92e24b1d27dea77f3dd2be7830c2c0358efb4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Recognising Errors in Assemblies using Paired Reads. A tool that evaluates the accuracy of a genome assembly using mapped paired end reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-recon-1.08
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 165
Depends: libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-recon-1.08_1.0_amd64.deb
Size: 59840
MD5sum: 91012e7b343fcdc679e6346840f955f1
SHA1: 0f3b82ae233d6bdd664e518aec46fbd95eedbc28
SHA256: 002ec5e717b85d48ec40e3cdb20a0ca325f0c29981a1f78829868dbc10647ad0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a package for automated de novo identification of repeat families from genomic sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-recycler-0.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 117746
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-recycler-0.7_1.0_amd64.deb
Size: 34576944
MD5sum: 841424276c0d901b0cb53992cfb39ff7
SHA1: 6d89636a963fb4c528faf9b930a34e168da5ca3b
SHA256: b57323cb55c75bd930f04ee9955bb42f73a1f36507318861b3a45363077ca3f0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Recycler is a tool designed for extracting circular sequences from de novo assembly graphs. It can be applied on isolate as well as metagenome and plasmidome data. The circular sequences it outputs may be plasmids, phages, etc. Recycler uses only features of the assembly graph (contig overlaps, lengths, and coverage level information) and alignments of paired-end reads to the contigs in the graph in order to identify these sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-referenceseeker-1.7.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 88670
Depends: gensoft-mash-2.2, gensoft-adm-python-3.8.1, libc6, gensoft-mummer-4.0.0rc1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-referenceseeker-1.7.1_1.0_amd64.deb
Size: 25988246
MD5sum: 475234e42c97e4b1ab6ad4c73d2331cb
SHA1: 889a6f783ed38fb164b4a44c5ee1c86c3b5795f2
SHA256: 6c7aae525517f6e51dd2a7f5911bd26f7a0154f36649322e9edd631f6e66be7d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rapid determination of appropriate reference genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-referenceseeker-1.7.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 88673
Depends: libc6, gensoft-mash-2.2, gensoft-mummer-4.0.0rc1, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-referenceseeker-1.7.3_1.0_amd64.deb
Size: 25988860
MD5sum: fcd40e42fbef8c40149676b0449faf7b
SHA1: c54995e618caae67bf4fd10d72ad936fe6b4098c
SHA256: 3ef48a9cdab86fee2fec0b2dc0d6b27ec993428932c7d4ccd31aad8e28c5538d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rapid determination of appropriate reference genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-relion-4.0.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2157193
Depends: gensoft-fltk-1.3.5, gensoft-topaz-0.2.4, gensoft-xpdf-4.03, gensoft-expat-2.4.1, gensoft-resmap-1.1.4, gensoft-libpng-1.6.37, gensoft-fontconfig-2.13.91, gensoft-ghostscript-9.50, libc6, gensoft-cuda-11.7, gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, gensoft-xz-5.2.5, gensoft-ctffind-4.1.14, gensoft-freetype-2.10.1, gensoft-libjpeg-turbo-2.0.4, libstdc++6, libgcc-s1, gensoft-gctf-1.06, gensoft-libtiff-4.1.0, libbz2-1.0, gensoft-fftw-3.3.8, zlib1g, gensoft-motioncor2-1.5.0, gensoft-xorg-libs-1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-relion-4.0.0_1.0_amd64.deb
Size: 999137748
MD5sum: cea1c3774eff063a0679078ad377b1dd
SHA1: 95d729e8840957f0b65a52faba364ab77d568a60
SHA256: 0f7a580dc77eda726f62b0ff115a31d7549346ca812613bea39fab1da645f6f5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RELION (for REgularised LIkelihood OptimisatioN) is a stand-alone computer program for Maximum A Posteriori refinement of (multiple) 3D reconstructions or 2D class averages in cryo-electron microscopy. It is developed in the research group of Sjors Scheres at the MRC Laboratory of Molecular Biology.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-repast-hpc-2.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 16129
Depends: gensoft-gcc-9.2.0, gensoft-hdf5-1.10.6, libc6, gensoft-netcdf-4.7.3, gensoft-curl-7.68.0, gensoft-boost-1.72.0, gensoft-netcdf-cxx-4.2, gensoft-openmpi-4.0.5, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-repast-hpc-2.3.0_1.0_amd64.deb
Size: 2976618
MD5sum: 7e7ba4634ee3eb784f44b66a8aae81a0
SHA1: cdafa0ccfe1a34af627aed49585c902746e749c7
SHA256: 8ad03b0bfbf65430627f6fea6426c965c942f9a1558e95ee81849f6fdbd94c75
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a next generation agent-based modeling system intended for large-scale distributed computing platforms. It implements the core Repast Simphony concepts (e.g. contexts and projections), modifying them to work in a parallel distributed environment.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-repeatanalysistools-88dc95a
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 511534
Depends: libstdc++6, gensoft-ccs-6.3.0, gensoft-adm-python-3.8.1, libc6, gensoft-minimap2-2.17, gensoft-parallel-20200222, gensoft-samtools-1.13, libgcc-s1, gensoft-lima-2.5.0, gensoft-pbmm2-1.7.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-repeatanalysistools-88dc95a_1.0_amd64.deb
Size: 160367888
MD5sum: a55b0f303ed66872ea7ea1a9ab954676
SHA1: cd83e3e7ea6d4c9e931682d50cfd0ec6193ef739
SHA256: c9e7d07ec497d184f574c05c71ba3baa3f7c99282a0945e8fb2263335f27d992
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This tool gets a CRISPR profile by identifying the presence of known spacers and direct repeats (DRs) in a given sequence based on a catalogue.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-repeatmasker-4.1.2-p1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 4975043
Depends: gensoft-trf-4.09, gensoft-twl-ninja-0.95-cluster-only, libstdc++6, gensoft-ltr-retriever-2.9.0, gensoft-phrap-1.090518, gensoft-adm-python-3.8.1, gensoft-ucsc-tools-v390, gensoft-hmmer-3.3.2, gensoft-recon-1.08, gensoft-rmblastn-2.11.0, zlib1g, gensoft-adm-perl-5.30.1, gensoft-repeatscout-1.0.6, libc6, libgcc-s1, gensoft-repeatmasker-4.1.2-p1, gensoft-mafft-7.467
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-repeatmasker-4.1.2-p1_1.0_amd64.deb
Size: 907491990
MD5sum: 5ea35da8556109729e259722fdd926b5
SHA1: cf5140041443e5d9b042c260a1311852f6c714f7
SHA256: 4021a8af3d3f43764312ffd38a11218da5f8c77205ae48a9bc3bf6bbb915b179
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences. The output of the program is a detailed annotation of the repeats that are present in the query sequence as well as a modified version of the query sequence in which all the annotated repeats have been masked (default replaced by Ns). Currently over 56% of human genomic sequence is identified and masked by the program. Sequence comparisons in RepeatMasker are performed by one of several popular search engines including nhmmer, cross_match, ABBlast/WUBlast, RMBlast and Decypher. RepeatMasker makes use of curated libraries of repeats and currently supports Dfam ( profile HMM library derived from Repbase sequences ) and Repbase, a service of the Genetic Information Research Institute. The program is installed with a full version of the repeat library DFAM Library Version = Dfam_2.0, RMLibrary Version = 20150807, Repbase Version = 20150807. RepeatMasker is intalled with crossmatch, rmblast, hmmer support for search engine (rmblast is the default)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-repeatmodeler-2.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3321
Depends: gensoft-ltr-retriever-2.9.0, gensoft-genometools-1.5.9, gensoft-adm-perl-5.30.1, gensoft-cd-hit-4.8.1, gensoft-twl-ninja-0.95-cluster-only, gensoft-mafft-7.467, gensoft-recon-1.08, gensoft-repeatscout-1.0.6, gensoft-rmblastn-2.10.0, gensoft-repeatmasker-4.1.0, gensoft-trf-4.09, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-repeatmodeler-2.0.1_1.0_amd64.deb
Size: 848764
MD5sum: b98984c8c807841f8b400759ca7bc6a4
SHA1: 4e18e891f6486a325c9f3be5cbed504809454074
SHA256: dbb8156bf7e1cefbdf30b8d502f76214f0913adbebc5628d98a2167884e98517
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a de novo transposable element (TE) family identification and modeling package.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-repeatmodeler-2.0.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 2805
Depends: gensoft-ucsc-tools-v390, gensoft-repeatscout-1.0.6, gensoft-cd-hit-4.8.1, libc6, gensoft-genometools-1.5.9, gensoft-recon-1.08, gensoft-twl-ninja-0.95-cluster-only, gensoft-ltr-retriever-2.9.0, gensoft-adm-perl-5.30.1, gensoft-trf-4.09, gensoft-repeatmasker-4.1.2-p1, gensoft-rmblastn-2.11.0, gensoft-mafft-7.467
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-repeatmodeler-2.0.3_1.0_amd64.deb
Size: 732202
MD5sum: 95dc9ab442118458798e7e13dfc2cfe2
SHA1: 9ea56595452812349a8c94127bd08b94f422a614
SHA256: 2ed5b3e5fd1de54f600e6d4fdda967be8df5e528d6393a98e654edb299e64826
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a de novo transposable element (TE) family identification and modeling package.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-repeatoire-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1504
Depends: gensoft-boost-1.72.0, gensoft-libmems-1.6.0, gensoft-zstd-1.4.4, gensoft-libgenome-1.3.1, gensoft-gcc-9.2.0, gensoft-libmuscle-1.0.0, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-repeatoire-1.0_1.0_amd64.deb
Size: 896848
MD5sum: 2155ebb36bbfd04648628bb9f9bf29d5
SHA1: e4415088b9c348fcebaf338c5ed8962aee1d4440
SHA256: 5f25e65ce722a15c3c737c3c0977443dc00d05f833033bc8c9cd7c0aeb13cf09
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Perform ab initio method to detect multiple  repeats in genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-repeatscout-1.0.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 118
Depends: gensoft-trf-4.09, gensoft-rmblastn-2.10.0, gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-repeatscout-1.0.6_1.0_amd64.deb
Size: 49042
MD5sum: 65372d38b6ef52098189147668ae0667
SHA1: ecd9d0e6f581fa3d53e77403c32f6974d0225d3c
SHA256: 60e972e9038c262cfbbe105292329ff13f25df83ad726f0e9dbfb3c1149f5781
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool to discover repetitive substrings in DNA.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-reportree-1.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 297594
Depends: libgcc-s1, gensoft-treecluster-1.0.3, zlib1g, libgomp1, libstdc++6, gensoft-cgmlst-dists-0.4.0, gensoft-adm-python-3.8.1, gensoft-vcf2mst-a5d5c9d, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-reportree-1.0.0_1.0_amd64.deb
Size: 95095948
MD5sum: c2abb9d98bda62574f7cac2655b8ebf8
SHA1: 099e2c6fb767d9c4edca8c27614a4461dbcda40f
SHA256: 5176a3275836ab8d8dc031cad0c68591423344678f9e296d07f43c2a97bb7be4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-reportree-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 294601
Depends: libstdc++6, gensoft-treecluster-1.0.3, zlib1g, libgcc-s1, gensoft-vcf2mst-a5d5c9d, libgomp1, gensoft-adm-python-3.8.1, libc6, gensoft-cgmlst-dists-0.4.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-reportree-1.0.1_1.0_amd64.deb
Size: 93924612
MD5sum: e86a6cefe6ff43e1d58bd363c3fe79cd
SHA1: 980c6d53b2bb51db26b769d5dbe19c0ef3d7e03d
SHA256: dad202c33c6bc01627451b76a28cf088a2650da882b6510d7163f1a8fad61f41
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-reportree-2.0.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 454290
Depends: gensoft-vcf2mst-a5d5c9d, libc6, gensoft-adm-python-3.8.1, zlib1g, gensoft-treecluster-1.0.3, libgcc-s1, gensoft-cgmlst-dists-0.4.0, libstdc++6, libgomp1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-reportree-2.0.2_1.0_amd64.deb
Size: 145325314
MD5sum: 5ca1f4aee36a4fec3664f2d3a1d2beee
SHA1: 9a5444189436c7964352fa6e58de9ada1de6dbb9
SHA256: b6424b78554d7f29e3d6c6053c54b11b63233a57d374acc78be5d9a00ab4cd9c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-req-1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4987
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-req-1.3_1.0_amd64.deb
Size: 1678444
MD5sum: 15d5ce6b298fb526d8666864e132444e
SHA1: 6a044f19357133f94714c0f0310d9e558ed1557e
SHA256: 9ca35a9a7a1be07f91e94eb8b7242b10de0067a527e836010c4ee0d14d952195
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: estimate the rate of elementary quartets (REQ) for each internal branch of a phylogenetic tree from a distance matrix
License: unknown
Vendor: Institut Pasteur

Package: gensoft-resfinder-3.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 228325
Depends: gensoft-kma-1.2.22, libc6, gensoft-adm-python-3.8.1, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-resfinder-3.2_1.0_amd64.deb
Size: 61161078
MD5sum: 4e464bd9be21adf5ff8ce0ef0e1c3a3b
SHA1: 4bd8a2e8c1549fd4fffb51ab643708a89867ca4d
SHA256: 7bf487dec0193130dc8b6c7a0ea0c33cb674f78fac85c0fa8e2c0222aa62141c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Calculates antibiotic resistance genes based on a BLAST alignment of the input sequence file and the specified allele set. If possible the ST will be given
License: unknown
Vendor: Institut Pasteur

Package: gensoft-resfinder-4.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 204698
Depends: gensoft-adm-python-3.8.1, gensoft-blast+-2.10.0, libgcc-s1, gensoft-kma-1.3.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-resfinder-4.0.1_1.0_amd64.deb
Size: 50125784
MD5sum: 1f1360bd686a1e6ff775e6f6082a574d
SHA1: d0f5c641dd847c601ea5818deb2b9081c83e9564
SHA256: 8018dd15785cb4922f3ac046c13389958b8fd3a336bf5c5f62f71009e06d16f1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Calculates antibiotic resistance genes based on a BLAST alignment of the input sequence file and the specified allele set. If possible the ST will be given
License: unknown
Vendor: Institut Pasteur

Package: gensoft-resmap-1.1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 219862
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-resmap-1.1.4_1.0_amd64.deb
Size: 63303114
MD5sum: 3ad893880ea30bf4ccfdc6c9da2c8da7
SHA1: 4557316b55d1a36e27a56f5508ebf8d74d40c530
SHA256: d2ceda30dadc0baecd3b635b5e98a59f5ee07b6dd513a8175c438a1481205ace
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software package for computing the local resolution of 3D density maps studied in structural biology, primarily electron cryo-microscopy (cryo-EM).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rfmix-1.5.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 307
Depends: libc6, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rfmix-1.5.4_1.0_amd64.deb
Size: 192668
MD5sum: 0d8f9b9ec818ef42e7fd26420c1f1293
SHA1: 7c6e8793da01b0768443325b9ee88c099553a38f
SHA256: b8571d36166daadc61138aa244c9fa6c9b8f511e12c230b3d03f1de8430cf268
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A discriminative method for local ancestry inference
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rgt-0.13.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 495502
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rgt-0.13.1_1.0_amd64.deb
Size: 168707774
MD5sum: bbb78a477a755ece0d70d0c19893c92a
SHA1: 754192ffafc7b20172a659153b1604ff77f789a8
SHA256: cc42809dd8b84ad6b1c0e564a51fb0f30dd9edf9df901991ad090a840fe3d07a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RGT is an open source Python 3.6+ library for analysis of regulatory genomics. RGT is programmed in an oriented object fashion and its core classes provide functionality for handling regulatory genomics data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rmblastn-2.10.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 132691
Depends: libbz2-1.0, gensoft-gcc-9.2.0, libc6, gensoft-pcre-8.43, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rmblastn-2.10.0_1.0_amd64.deb
Size: 50075066
MD5sum: efc5d53a16bcdb3ceae972530a6813aa
SHA1: 9712f311aaf593829109ca7e82363ef4d0ef3827
SHA256: f4e9594b25d9ae35791e75059bda2acc012d2cbd53a34e4cbe0ed89cf4eb77e3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST suite. The primary difference between this distribution and the NCBI distribution is the addition of a new program rmblastn for use with RepeatMasker and RepeatModeler.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rmblastn-2.11.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 192650
Depends: libc6, libbz2-1.0, gensoft-pcre-8.43, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rmblastn-2.11.0_1.0_amd64.deb
Size: 73188060
MD5sum: ff402c989b86b724d92ad0f2ada958e1
SHA1: e655ab4280f8ba7c3f03cf08d9bf6f8d17ba6f1b
SHA256: 31c9648c42ac297263fd4c3e7026898e8aa5f9f38a36e5eabd407ffbca34e8cc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST suite. The primary difference between this distribution and the NCBI distribution is the addition of a new program rmblastn for use with RepeatMasker and RepeatModeler.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rna-seqc-1.1.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 44935
Depends: gensoft-java-1.7.0, gensoft-bwa-0.7.17, gensoft-picard-tools-2.22.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rna-seqc-1.1.8_1.0_amd64.deb
Size: 39522714
MD5sum: 85f5b61aa890903335f0c45b006a0592
SHA1: 6088c85cdba128470277e245931cb27c64e19da5
SHA256: a55d855292f0b122f985df90312bb9489da28c31d5122d770859af5b8f49a7ee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RNA-SeQC is a java program which computes a series of quality control metrics for RNA-seq data. The input can be one or more BAM files. The output consists of HTML reports and tab delimited files of metrics data. This program can be valuable for comparing sequencing quality across different samples or experiments to evaluate different experimental parameters. It can also be run on individual samples as a means of quality control before continuing with downstream analysis.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rnastructure-6.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 130771
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17, gensoft-cuda-11.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rnastructure-6.2_1.0_amd64.deb
Size: 49460212
MD5sum: e85e5cc0ff0be2297f0fd459e2b026f5
SHA1: 455871f417c1886c0d1f5ef0cf758ca2b99e34ac
SHA256: 45c61202f13084b34fafd1273b032c229a34a0903ba7d984580aa81bd8462a38
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RNAstructure is a complete package for RNA and DNA secondary structure prediction and analysis. It includes algorithms for secondary structure prediction, including facility to predict base pairing probabilities. It also can be used to predict bimolecular structures and can predict the equilibrium binding affinity of an oligonucleotide to a structured RNA target. This is useful for siRNA design. It can also predict secondary structures common to two, unaligned sequences, which is much more accurate than single sequence secondary structure prediction. Finally, RNAstructure can take a number of different types of experiment mapping data to constrain or restrain structure prediction. These include chemical mapping, enzymatic mapping, NMR, and SHAPE data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rnastructure-6.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 130771
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-gcc-9.2.0, gensoft-cuda-11.1, gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rnastructure-6.3_1.0_amd64.deb
Size: 49461544
MD5sum: 4c41b646e932a0b15b43de6c58fcf9ea
SHA1: 5a94f7e1b21ae9d3df5138d6ad9a2fef341ab78b
SHA256: 22fd9b43435c8473913f98eb94a1587de4e1dc420081c294766cbf799ddf2157
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RNAstructure is a complete package for RNA and DNA secondary structure prediction and analysis. It includes algorithms for secondary structure prediction, including facility to predict base pairing probabilities. It also can be used to predict bimolecular structures and can predict the equilibrium binding affinity of an oligonucleotide to a structured RNA target. This is useful for siRNA design. It can also predict secondary structures common to two, unaligned sequences, which is much more accurate than single sequence secondary structure prediction. Finally, RNAstructure can take a number of different types of experiment mapping data to constrain or restrain structure prediction. These include chemical mapping, enzymatic mapping, NMR, and SHAPE data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-roary-3.13.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 340181
Depends: gensoft-parallel-20200222, gensoft-exonerate-2.4.0, zlib1g, libc6, gensoft-blast+-2.10.0, gensoft-prank-170427, libbz2-1.0, gensoft-fasta-3.8h, gensoft-adm-perl-5.30.1, gensoft-r-3.6.2, gensoft-expat-2.2.9, gensoft-libiconv-1.16, gensoft-cd-hit-4.8.1, gensoft-xz-5.2.4, gensoft-libxml2-2.9.10, gensoft-gcc-9.2.0, gensoft-fasttree-2.1.11, gensoft-bppsuite-2.2.0, gensoft-mafft-7.453, gensoft-mcl-14-137, gensoft-adm-python-2.7.17, gensoft-bedtools-2.29.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-roary-3.13.0_1.0_amd64.deb
Size: 115457066
MD5sum: 91bdaa91d2b9d37345e555d3146a6406
SHA1: 7e82506fd018ded79dfde0f7cff4ec9849141ea3
SHA256: 89621ecadcfbd9365149307eb6d6541ab3d7a31ca5f77a8b05dac57037a25617
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Roary is a high speed stand alone pan genome pipeline, which takes annotated assemblies in GFF3 format (produced by Prokka) and calculates the pan genome.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rock-1.9.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2052
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rock-1.9.3_1.0_amd64.deb
Size: 600744
MD5sum: 2024d7fe3030f005a79e1530de110f90
SHA1: d9d2772ec022fda11c7686f7b7559571188669e9
SHA256: 6234f3a533dc8cca4e4fa6e7609311ce167473a1b5d443bfc3bf5fc74126dfb9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ROCK (Reducing Over-Covering K-mers) is a command line program written in C++ that runs an alternative implementation of the digital normalization method (e.g. Brown et al. 2012, Wedemeyer et al. 2017, Durai and Schulz 2019).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rock-1.9.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1849
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rock-1.9.4_1.0_amd64.deb
Size: 569162
MD5sum: 235dc3c2274f8034330734b65f59e2c3
SHA1: 498bce438469a1886177c94551cc531e6f4f76c7
SHA256: bcd387ec78f34cc1025f6f817a37a7d1462a02f04407a3cbef217f63e6b283f8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ROCK (Reducing Over-Covering K-mers) is a command line program written in C++ that runs an alternative implementation of the digital normalization method (e.g. Brown et al. 2012, Wedemeyer et al. 2017, Durai and Schulz 2019).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rock-1.9.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1846
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rock-1.9.5_1.0_amd64.deb
Size: 568412
MD5sum: f5972ecc225de7bdd058d4f61a4601e5
SHA1: 3473be1b03b2ba2c266eb4ea3c1e29eee333ecef
SHA256: 7bf32353f09f34b91c2b7fd29424a834c0988aad31ffa1fa5649845f36bdd722
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ROCK (Reducing Over-Covering K-mers) is a command line program written in C++ that runs an alternative implementation of the digital normalization method (e.g. Brown et al. 2012, Wedemeyer et al. 2017, Durai and Schulz 2019).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rock-1.9.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1844
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rock-1.9.6_1.0_amd64.deb
Size: 567546
MD5sum: 6c1bb91fb42d250b9b268f7b4a6fab2c
SHA1: eba05c9532a09fd9904a8aa77ff90c694be2893d
SHA256: c6c0dea204ffb50a68b91853d9c6b3b45576b1c735a5d6e665e17c8ccd2c17f0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ROCK (Reducing Over-Covering K-mers) is a command line program written in C++ that runs an alternative implementation of the digital normalization method (e.g. Brown et al. 2012, Wedemeyer et al. 2017, Durai and Schulz 2019).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rock-2.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1863
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rock-2.0.0_1.0_amd64.deb
Size: 572906
MD5sum: e94dd02046956ccd417b388c66f9ab53
SHA1: 7a52df4081da6ddfccc042911356e392c37e1e19
SHA256: cacfbe6576e731ac52c450f6e928eaf13bb744c6ebdfd378cbbd7dc64a02dcf6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ROCK (Reducing Over-Covering K-mers) is a command line program written in C++ that runs an alternative implementation of the digital normalization method (e.g. Brown et al. 2012, Wedemeyer et al. 2017, Durai and Schulz 2019).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rocksdb-6.7.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 663878
Depends: zlib1g, gensoft-gflags-2.2.0, gensoft-gcc-9.2.0, gensoft-snappy-1.1.8, libbz2-1.0, libc6, gensoft-lz4-1.9.2, gensoft-zstd-1.4.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rocksdb-6.7.3_1.0_amd64.deb
Size: 126344544
MD5sum: e073a4e87704d1af61d4de1b4e324e6a
SHA1: 72055dac15bae92f1574a34d06c8eb77cac3b7ce
SHA256: 65c8a5178f30a468654ac0664b2d30a47134f4989acf24a0784d1b2d3a2b75db
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A library that provides an embeddable, persistent key-value store for fast storage.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rsem-1.3.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10502
Depends: libc6, gensoft-r-3.6.2, gensoft-hisat2-2.1.0, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17, zlib1g, gensoft-bowtie2-2.1.0, gensoft-adm-perl-5.30.1, gensoft-star-2.7.3a, gensoft-bowtie-1.2.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rsem-1.3.3_1.0_amd64.deb
Size: 5381346
MD5sum: 159341a76c44161fac5bd49a24ae9de5
SHA1: 1ce74d75226807fe9861a5d0098def48970de573
SHA256: a895ea1683958456177e5f9d24941ecfc00c3db9f60d09a487e728dc6eb76d29
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RSEM is a software package for estimating gene and isoform expression levels from RNA-Seq data. The RSEM package provides an user-friendly interface, supports threads for parallel computation of the EM algorithm, single-end and paired-end read data, quality scores, variable-length reads and RSPD estimation.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rseqc-3.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 138396
Depends: gensoft-adm-python-3.8.1, libc6, zlib1g, gensoft-r-3.6.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rseqc-3.0.1_1.0_amd64.deb
Size: 40129854
MD5sum: d705adc0ba4c4a070d305862cf469002
SHA1: a65b824ddc1519dd339be2e2aa7a71e1b5ccebfb
SHA256: 90cf2dc09b60ae3012eeea8cbf30d61a3be67c0bcf05f09192748ab4c6790c44
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Deep transcriptome sequencing (RNA-seq) provides massive and valuable information of transcribed regions in the genome. Ideally, RNA-seq should be able to directly identify and quantify all RNA species, small or large, low or high abundance. However, RNA-seq is a complicated, multiple step process involving sample preparation, amplification, fragmentation, purification and sequencing. A single improper operation would result in biased or even unusable data. Therefore, it is always a good practice to check the quality of your RNA-seq data before analysis. Here we developed RSeQC package to comprehensively evaluate RNA-seq datasets generated from human or other well annotated model organisms such as mouse, fly, zebrafish, etc.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rubra-0.1.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7943
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rubra-0.1.5_1.0_amd64.deb
Size: 2646084
MD5sum: 598d0d4f3a08357f8ad3fa94ecfa5980
SHA1: e809d5b844f380a9b4dad43f2ad867beb66a4a53
SHA256: 2eaa31d1430107810a15c0135d7962112222e018c10f07bcb9627485cdadb000
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Infrastructure code to support DNA pipeline
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ruby-2.7.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 47004
Depends: gensoft-gdbm-1.18.1, libncurses5, gensoft-gmp-6.2.0, libreadline8, libssl1.1, gensoft-libffi-3.2.1, libc6, libbz2-1.0, libtinfo5, zlib1g, gensoft-db-18.1.32
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ruby-2.7.0_1.0_amd64.deb
Size: 25889034
MD5sum: 8e37ae6f656ca4fa50c662e5681cad01
SHA1: 0d3188a4d5488867348564f9a1f0c2e7c406dd92
SHA256: 35565048ed82627f66b14ffdf13293bb74fdd04f3b0c4094a5aa97a1a9d44446
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A dynamic, open source programming language with a focus on simplicity and productivity. It has an elegant syntax that is natural to read and easy to write.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rust-1.43.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 742919
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rust-1.43.0_1.0_amd64.deb
Size: 190287680
MD5sum: 5f620945e816db4c15a3e72bd29d65a9
SHA1: f3060c87710541183884924d94d98628e82efa49
SHA256: ada2f884b9648a3a885533c15c1643173e7bc29e9e884b03e3decfb2df2297a3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: language empowering everyone to build reliable and efficient software
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rust-1.57.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1109394
Depends: libgcc-s1, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rust-1.57.0_1.0_amd64.deb
Size: 255207006
MD5sum: c4d8ac9e9a78ece67002c817c01063c4
SHA1: 56593bda2185ece123e135eb00b563c11dec847d
SHA256: 9b636a592a1403ad4cbaae16bd30670932cac2c7f55bb5680f605b339f2828cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: language empowering everyone to build reliable and efficient software
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rust-1.66.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1422466
Depends: zlib1g, libc6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rust-1.66.1_1.0_amd64.deb
Size: 324601310
MD5sum: d418b5b7e97a1a573d563c1cdf5b3563
SHA1: 35c093d2c590c864a1be0d4725d1d3986937671b
SHA256: 00b18b37d164442e2f1bc8030ed35733473bc4989f3b0bdc95efe8e12a56415f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: language empowering everyone to build reliable and efficient software
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rust-mdbg-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 151419
Depends: libgcc-s1, gensoft-seqtk-1.3, time, libcrypt1, zlib1g, bc, libstdc++6, gensoft-adm-python-3.8.1, libc6, gensoft-gfatools-0.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rust-mdbg-1.0.1_1.0_amd64.deb
Size: 47468520
MD5sum: 72c317fd91b144680800899d9d8e5c45
SHA1: 6bd209435e333e7748ff0eacfa468f90b785f5c8
SHA256: 31cc701614452fdd310b5052c02bc9a253913cce607274d7c7d70c756a777b98
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: rust-mdbg is an ultra-fast minimizer-space de Bruijn graph (mdBG) implementation, geared towards the assembly of long and accurate reads such as PacBio HiFi.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-rvtests-2.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 353888
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-rvtests-2.1.0_1.0_amd64.deb
Size: 120373190
MD5sum: 4f375091e9511e195c2c83a316ae8dac
SHA1: f019ac5ea41c70d60bd7bd1374358683fba857b8
SHA256: d46106af4361e91b9f6fc5a9e1c065d92d2f8107644f6177aeda4684ced8f224
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rvtests, which stands for Rare Variant tests, is a flexible software package for genetic association analysis for sequence datasets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-salmon-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 125388
Depends: libc6, gensoft-tbb-2020.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-salmon-1.1.0_1.0_amd64.deb
Size: 46699876
MD5sum: d39fbe2fd068aecdfb7e841e3343632d
SHA1: ce8b4201c25d6c3ebc381e2afc7fedf97365b042
SHA256: 80256ad3227eedd4f141e119fcc323c451b9ead3dc304fbbb190f6a09a8dd395
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Salmon is a tool for wicked-fast transcript quantification from RNA-seq data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-salmon-1.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 37875
Depends: gensoft-gcc-9.2.0, gensoft-tbb-2020.1, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-salmon-1.3.0_1.0_amd64.deb
Size: 16516104
MD5sum: 1e4cf4f2be5c65b659896400abdc5876
SHA1: e775e8bbda3d81999e8a8ba4cc4d85e26f61d07b
SHA256: b5baca7e925b74bcbfebea4ab72207d3d4b86f681178c00248d718556d3ac7bc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Salmon is a tool for wicked-fast transcript quantification from RNA-seq data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-salmon-1.9.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 29200
Depends: zlib1g, libc6, gensoft-tbb-2021.5, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-salmon-1.9.0_1.0_amd64.deb
Size: 7563130
MD5sum: 369d151ce4657e95606ce6bbc8d4156e
SHA1: 2f355ea4f635fbf39535591204fa6d1c2c8847d5
SHA256: 7046bcb7d0724efe1d2840547dcfd61d80521a643466bbd64fcaaca24b259230
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Salmon is a tool for wicked-fast transcript quantification from RNA-seq data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-salmonella-crispr-typing-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 85362
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-salmonella-crispr-typing-1.0.1_1.0_amd64.deb
Size: 25094976
MD5sum: 127cde3185ec8e48be0362f123280eba
SHA1: 7337f6572695016a035097c5e840687e6d3fb35d
SHA256: 333f78edc8b241d3bc2290f276447392a7e81372287ee27797243174a3f22941
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This tool gets a CRISPR profile by identifying the presence of known spacers and direct repeats (DRs) in a given sequence based on a catalogue.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sam2msa-0.2.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 21556
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sam2msa-0.2.2.1_1.0_amd64.deb
Size: 7962772
MD5sum: 523911ee63333e54a9227a7ce05ea839
SHA1: f94895eaf643cc6b6643a4db656914698db12f84
SHA256: 4df1a826df43263c042356dec374917db3ba588ebb267c048fa6b48992be1d8d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Building a multiple sequence alignment well-suited for phylogenetic analysis from read mapping data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sam2msa-0.3.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 21556
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sam2msa-0.3.3.1_1.0_amd64.deb
Size: 7959318
MD5sum: 19acf84bae52f35156c4a3fff4fc54a4
SHA1: ded0d4fe6953f852c9114e1dd5c1795069c73bd2
SHA256: e8f10ad142f5fe36cd49d5c98005ce0e0a7944e0c9935514ee04e74e270c17b2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Building a multiple sequence alignment well-suited for phylogenetic analysis from read mapping data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sambamba-0.7.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 23776
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sambamba-0.7.1_1.0_amd64.deb
Size: 5891912
MD5sum: 81b65a1ea9d871ed5127411619779fef
SHA1: 12d7d03d8e2ff0a97c99a3de5e5e7fd88d1231da
SHA256: 55bc1de7295f55cc76c678dcf472814db242a2c906b7f366134946a2b4550b92
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Sambamba is a high performance highly parallel robust and fast tool (and library), written in the D programming language, for working with SAM and BAM files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samblaster-v.0.1.24
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 176
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samblaster-v.0.1.24_1.0_amd64.deb
Size: 130640
MD5sum: 3a56f24288f46b12bdb43b940de2b5a2
SHA1: e34ec6f8ad5c72da734125c79603ae3681aaec24
SHA256: d4b32634fa7a720aa7d596e654060e76330fe54b736125985f00930ce3c3f589
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samclip-0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samclip-0.2_1.0_amd64.deb
Size: 5626
MD5sum: 8b6625bbc307de11ac0ca2167de03d13
SHA1: 720b56c88ab4c297ecf5bc854914ebe8de2b5f5c
SHA256: bb0420c5afa7e63b1d5612866246dc13bd724330d1dfc15a3c017c37fda67cb1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Filter SAM file for soft and hard clipped alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samstat-1.5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 228
Depends: libc6, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samstat-1.5.1_1.0_amd64.deb
Size: 84974
MD5sum: 0bcb8845ce96f7d03a437d85652792c7
SHA1: 6bc27a38074b7e553307c10cd110575564dc4df6
SHA256: 912693dd513c9cd41b0dd1869107e409ce6e816492e1ed4da93db54b7bd1adde
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: display statistics of large sequence files from next generation sequencing projects stored in SAM/BAM format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samtools-0.1.18
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2529
Depends: gensoft-adm-python-2.7.17, libc6, libncurses5, libtinfo5, gensoft-adm-perl-5.30.1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samtools-0.1.18_1.0_amd64.deb
Size: 932158
MD5sum: b7ca9c9b8b68e8e9d5ebf045a3cdd66b
SHA1: c8916053b1362feb8a690a4103cba535fdd93b0f
SHA256: 3c9133e00c0c4384bcbd8cc8aa4707e2ff2ea39f20812cb25e487ba01baa691f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samtools-0.1.19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2784
Depends: zlib1g, gensoft-adm-python-2.7.17, libtinfo5, libncurses5, libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samtools-0.1.19_1.0_amd64.deb
Size: 1035092
MD5sum: 3a14a4778d46fe00c88d727895a7aec5
SHA1: 405db7d27afbe4f6faaccba869791fb0792a3d1f
SHA256: f078593294dcc49640145827fe4e47e3dbfbe8dac9558dd8410767f1b802e69e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samtools-1.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12367
Depends: zlib1g, gensoft-adm-perl-5.30.1, gensoft-xz-5.2.4, libbz2-1.0, libtinfo5, gensoft-htslib-1.10, libssl1.1, gensoft-adm-python-2.7.17, gensoft-curl-7.68.0, libc6, libncursesw5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samtools-1.10_1.0_amd64.deb
Size: 4329010
MD5sum: fb5237d006f834138a2f2ffa82d2eb19
SHA1: f511a533a80fbf96b92a3dcdf10420755362460f
SHA256: a203a2d10b8f81255e4bf3df74aed67c3e333cf9211a7468536040357518c9c5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samtools-1.13
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14462
Depends: libssl1.1, gensoft-xz-5.2.4, libbz2-1.0, zlib1g, libncursesw6, gensoft-curl-7.68.0, gensoft-adm-python-2.7.17, gensoft-adm-perl-5.30.1, libtinfo6, libc6, gensoft-htslib-1.13
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samtools-1.13_1.0_amd64.deb
Size: 5038672
MD5sum: 94f24cfd22d723cce1c1a758b9131ebe
SHA1: f0d5d1d7fa0d81b43ba79891040d26e1b0cd4bf5
SHA256: 2a1bca969f056a11138c56dcdeff4e234e1315749ab820f53fdce0abf0dd89e3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samtools-1.16
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 15814
Depends: gensoft-adm-python-2.7.17, gensoft-curl-7.68.0, gensoft-adm-perl-5.30.1, libbz2-1.0, zlib1g, gensoft-xz-5.2.5, libncursesw6, libc6, gensoft-htslib-1.16, libssl1.1, libtinfo6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samtools-1.16_1.0_amd64.deb
Size: 5461340
MD5sum: 5185f6c3c025d2684fc1b046d1d65fa6
SHA1: 7fb8942da244c9b2cb3d4fd85e76e3d840af459e
SHA256: 9f9426de820de281bcb58fc0ce2615967f9e704c571e350ba0612f8760ae4d23
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samtools-1.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 9685
Depends: libbz2-1.0, libncursesw5, gensoft-adm-python-2.7.17, libc6, zlib1g, gensoft-adm-perl-5.30.1, libssl1.1, gensoft-xz-5.2.5, gensoft-curl-7.68.0, gensoft-htslib-1.4, libtinfo5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samtools-1.4_1.0_amd64.deb
Size: 3439102
MD5sum: 5ae1ca6b22ef5441ea8f8ecfbf5be9e4
SHA1: c47c16011ff0bb73436b70c90b29a21dfa52c3ff
SHA256: 7fc8799c101d478abd8a0a82f0c3dbe9915e8d394c6366da07c021210e2359e4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-samtools-1.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 11082
Depends: gensoft-xz-5.2.4, gensoft-adm-perl-5.30.1, zlib1g, gensoft-htslib-1.9, gensoft-curl-7.68.0, libncursesw5, libtinfo5, libbz2-1.0, libssl1.1, libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-samtools-1.9_1.0_amd64.deb
Size: 3891350
MD5sum: 27fca82d6402bfd068a52c7f4856f17b
SHA1: f623268ba9c97f5dd410928cb972f7966cc79a53
SHA256: 89fd1e5d486b4fa00276570b8a9c5b9a966510cc54d257ab35c656d2b0ed92f6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sap-1.1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 385
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sap-1.1.3_1.0_amd64.deb
Size: 148778
MD5sum: 5757318890d24f691c06c2120fb8d17f
SHA1: 5f69d7b2c12b8f0fd82dc1ea69721c29d4619893
SHA256: 0c86d08b11bf546feebbbc1a542b717ba5b07396b1d6869a3db8879360868963
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pairwise structure alignment via double dynamic programming
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sartools-1.7.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 437399
Depends: gensoft-singularity-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sartools-1.7.2_1.0_amd64.deb
Size: 444229296
MD5sum: 90e0b93cbaab207f24b273c5a04a0d7b
SHA1: d900a6ba0369c6db24ac09a281754184e124380b
SHA256: 3b652c06a0eafcf3822a354bc685af7c8cf2c7eb2de01888cdea7f282540df13
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Statistical Analysis of RNA-Seq Tools. SARTools provides R tools and an environment for the statistical analysis of RNA-Seq projects load and clean data, produce figures, perform statistical analysis/testing with DESeq2 or edgeR, export results and create final report
License: unknown
Vendor: Institut Pasteur

Package: gensoft-scalasca-2.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 348645
Depends: gensoft-score-p-6.0, zlib1g, gensoft-gcc-9.2.0, gensoft-openmpi-4.0.5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-scalasca-2.5_1.0_amd64.deb
Size: 97462960
MD5sum: bca68b6289212032e1182b87f5309c92
SHA1: 831ccd192a55950455f64f64efac6f68b844278d
SHA256: 0326da5359f8e33ae434c8e8ed2341606242c848e9e9328e60ed7972ea3be1cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software tool that supports the performance optimization of parallel programs by measuring and analyzing their runtime behavior
License: unknown
Vendor: Institut Pasteur

Package: gensoft-scalpel-0.5.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 869
Depends: gensoft-adm-perl-5.30.1, libc6, gensoft-libbam-2.5.1, gensoft-bamtools-2.5.1, gensoft-gcc-9.2.0, gensoft-samtools-1.10, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-scalpel-0.5.4_1.0_amd64.deb
Size: 244552
MD5sum: 35c2a3a2a9d82d4ad40a2368df74d5f9
SHA1: cc76ef74a8e14541f6a66c07370f315104207eee
SHA256: 5bc643d401cecd8518493a0db6d59b04466f405cd8818ffaa3d0c8ec43a5fee5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: software package for detecting INDELs (INsertions and DELetions) mutations in a reference genome which has been sequenced with next-generation sequencing technology (e.g., Illumina). Scalpel is designed to perform localized micro-assembly of specific regions of interest with the goal of detecting mutations with high accuracy and increased power. It is based on the de Bruijn graph assembly paradigm and implements an on-the-fly repeat composition analysis coupled with a self-tuning k-mer strategy to increase specificity in regions characterized by complex repeat structures
License: unknown
Vendor: Institut Pasteur

Package: gensoft-scan-for-matches-97
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 110
Depends: gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-scan-for-matches-97_1.0_amd64.deb
Size: 37058
MD5sum: 8404b2cc0b4494341b50e2611e57ad8c
SHA1: b69073db1af2072bc650523c56808a994026ac49
SHA256: b45d7cd27e9a2be3e7b64230332c9fb9fddf71ed81fe8cc85ab291c27b375dc5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Search for patterns in DNA and protein sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-scoary-1.6.16
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 159930
Depends: libc6, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-scoary-1.6.16_1.0_amd64.deb
Size: 50687996
MD5sum: 156517b154bd54bd3dc45214cb885389
SHA1: 3643911a487f43b3456c0068926493f9f628ece8
SHA256: 3b79d23f9d3c6e394e111cf6a32ec3b5c71b68364fe79572fc1d20fa532c151b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pan-genome wide association studies. Scoary is designed to take the gene_presence_absence.csv file from Roary as well as a traits file created by the user and calculate the assocations between all genes in the accessory genome (all genes that are present in i genomes where 1 < i < N) and the traits. Scoary reports a list of genes sorted by strength of association per trait.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-scotch-6.0.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3167
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-scotch-6.0.9_1.0_amd64.deb
Size: 2116086
MD5sum: d35be8b7c29a34544f226eb72788df42
SHA1: 5573764ee1bc270fb65b4bc252fae7134ed599ac
SHA256: 3e49915778216d8d0d0b2c8a161532c9dd481cfda57d39bad1579ae6d33ce22f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Software package and libraries for sequential and parallel graph partitioning, static mapping, and sparse matrix block ordering, and sequential mesh and hypergraph partitioning.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-scripture-beta
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 17101
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-scripture-beta_1.0_amd64.deb
Size: 16685756
MD5sum: 9fdb77aa36ae1dd59e06da7cbff53023
SHA1: 523642db8878e0b0bba18c6d40d2c030ba673f6b
SHA256: 767f6c59accefb532693081f3f91d742daa94b920ded9b12246e915d560310f0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a method for transcriptome reconstruction that relies solely on RNA-Seq reads and an assembled genome
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sdl-2.0.12
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30133
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sdl-2.0.12_1.0_amd64.deb
Size: 8059596
MD5sum: c8b9a1239f1c28f36a04efd6c7dfa634
SHA1: 3bbc33905a176248142d8d5d025798fa4fa7278f
SHA256: cde717bbbd6c5ad09366dae7004376485508f7c3a49c2ce0e0b02cf2dd7fd5a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Simple DirectMedia Layer is a cross-platform development library designed to provide low level access to audio, keyboard, mouse, joystick, and graphics hardware via OpenGL and Direct3D.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sdsl-lite-2.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5465
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sdsl-lite-2.1.1_1.0_amd64.deb
Size: 1417492
MD5sum: 8e6a50d4e55539f8f8900c2a23aa7465
SHA1: 2af9ad4329836f7623c0dd1560360819e04be9df
SHA256: 5c07798d7b0d8d9c41f8fc8189e1231078eecabfc2e5e0c31f2b2ca139ff4b54
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Succinct Data Structure Library (SDSL) is a powerful and flexible C++11 library implementing succinct data structures.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sdsl-lite-2.3.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 3843
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sdsl-lite-2.3.1_1.0_amd64.deb
Size: 985136
MD5sum: d6b1089b86fe6832ccd71985c20afc3b
SHA1: a47663787b52fa8604eb8975fbbd19e7273aed8e
SHA256: d5a4502b850f6c5021032541daaf4d9ce7bc1f644eb38f183fb6327417a69769
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Succinct Data Structure Library (SDSL) is a powerful and flexible C++11 library implementing succinct data structures.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seaview-5.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1210
Depends: gensoft-clustal-omega-1.2.4, gensoft-gblocks-0.91b, zlib1g, gensoft-muscle-3.8.1551, gensoft-expat-2.2.9, gensoft-xorg-libs-1.1, gensoft-phyml-3.3.20190909, gensoft-gcc-9.2.0, gensoft-fltk-1.3.5, gensoft-libjpeg-turbo-2.0.4, libbz2-1.0, gensoft-libpng-1.6.37, gensoft-fontconfig-2.13.91, gensoft-freetype-2.10.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seaview-5.0.1_1.0_amd64.deb
Size: 546426
MD5sum: e2e11970cbd089fadf9e1bb69154f3e7
SHA1: 7a80b60709d525dbccdfb9416cd530ba9f8cb868
SHA256: cc2abfeda2d349a193aeff5be4a1b47b9c37e8bdd4ba3b97d7221957504247a9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SeaView is a multiplatform, graphical user interface for multiple sequence alignment and molecular phylogeny.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seer-1.1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2160
Depends: gensoft-boost-1.72.0, gensoft-hdf5-1.10.6, gensoft-blas-3.8.0, gensoft-gcc-9.2.0, libc6, gensoft-armadillo-9.800.4, gensoft-gzstream-1.5, gensoft-atlas-3.10.2, zlib1g, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seer-1.1.4_1.0_amd64.deb
Size: 787272
MD5sum: 346f6d8316f285b43a7b0910bfa9e0a2
SHA1: 4353911535f2cc9db9b5863b1f8e7fd52636f76b
SHA256: 51fcbddcb2ae02676d0c4110033ed158165c641abf402d3ff8fada56f5652337
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Sequence element enrichment analysis. Find sequence elements (words/kmers) that are enriched in samples with a given phenotype, which may be binary or continuous.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sepp-4.5.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 27381
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-adm-python-3.8.1, gensoft-hmmer-3.2.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sepp-4.5.1_1.0_amd64.deb
Size: 11151322
MD5sum: 81f9b8ebf73958871bb343c8c6d61157
SHA1: 727a2345cceb8d51027764a2854a52e226837afa
SHA256: fb16e7e7f906d831dfecfe35985c54d3a20f61c865e608edabe140244363e10b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Ensemble of HMM methods (SEPP, TIPP, UPP)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seq-gen-1.3.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 333
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seq-gen-1.3.4_1.0_amd64.deb
Size: 135188
MD5sum: fc50c500042b3189194583c773c274b5
SHA1: 7aefccbdd35322ed40dbb771b469cbdaea818d08
SHA256: 19d7121dee2f46f713ecbf0de0bfe7a40f16458c66337bf923855ed61b9daaa3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program that will simulate the evolution of nucleotide or amino acid sequences along a phylogeny, using common models of the substitution process
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqan-library-1.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 23804
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqan-library-1.4.2_1.0_amd64.deb
Size: 3293772
MD5sum: be10f35561d5ca5dc24053b33780c05a
SHA1: f7648c80daea4a7f3c55345154841557366aeadb
SHA256: e58d7c8ef68cad06888080b40135b0a072023edb69b01c230030e28123ef85d8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqan-library-2.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 57042
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqan-library-2.0.0_1.0_amd64.deb
Size: 15526842
MD5sum: 11f2e387269def1f8dbbdb7937cf1130
SHA1: bfa73aaa61f972fc61a95ef05c7b8741f793f55c
SHA256: c8673aa059754a2856d0f1169d4620fa0388e5b0518e18bf302b32d59b3f4724
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqan-library-2.4.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 59383
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqan-library-2.4.0_1.0_amd64.deb
Size: 12575704
MD5sum: 1e6c3f87c913c4d3c55585fbf999ae83
SHA1: 729ce8df5460ad39c50adccc6a253046e8cc25eb
SHA256: abf701dcf60526024c3b870891b44155bcd2afd5803ebd9841fa6ea0d14d5031
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqexclude-0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25
Depends: gensoft-squizz-0.99c, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqexclude-0.1_1.0_amd64.deb
Size: 9360
MD5sum: 5a49eb9ce9e4410beb6c432579f860e2
SHA1: 6693f07c781121e5b4fc89d172ae653c15c51d18
SHA256: 73067c66ad9bdc76b98a4600049e0c750e1cfd49ba1e7ad9ed64a4b3c13efef4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: filter fasta sequences based on size
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqkit-0.14.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14049
Depends: libc6, libbz2-1.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqkit-0.14.0_1.0_amd64.deb
Size: 6927220
MD5sum: 011c765076698c08819363e2b9c8b5d9
SHA1: a7410c9eaceb69e6fb791276759997c57474e906
SHA256: fb8fe74800e269a77019b1a88f1fd51a623d6d868cd2c3b8693558809c06049f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqkit-2.3.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 14297
Depends: zlib1g, libc6, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqkit-2.3.1_1.0_amd64.deb
Size: 7287800
MD5sum: 1fd03bc9455f938c5b8f1168886364a5
SHA1: c0531811cc4b6ab7a4eb2d0e34cb322dde303f1b
SHA256: 205ad217c5ec510742cd6b980fc6faf6f7734f046fecc3d96e6470b53873bb03
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqlib-1.1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12025
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqlib-1.1.2_1.0_amd64.deb
Size: 2477236
MD5sum: bc3e6fd71951846f25b1087afee64b4b
SHA1: df148624ce685d5cbfd3336de5e50011e64dbd53
SHA256: 25b682172b6c10a421774471b50636f37e1591454983973c7e542564023bd7b1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: C++ interface to HTSlib, BWA-MEM and Fermi
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqprep-1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 128
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqprep-1.2_1.0_amd64.deb
Size: 44868
MD5sum: 1ba69aad3106ff28031cc338075f0e1f
SHA1: ca8657d99c7e437327a408819b88503cc1607b8c
SHA256: 5c66daf4c8b9e20cba43c4c18bd1181a666e55e24355e75805aa022299a5615d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program to merge paired end Illumina reads that are overlapping into a single longer read. It may also just be used for its adapter trimming feature without doing any paired end overlap.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqprep-1.3.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 128
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqprep-1.3.2_1.0_amd64.deb
Size: 44930
MD5sum: 775f160b2da29dfb5b7f0890d4250e7f
SHA1: 2501feb665fabbbca94eb24d4abb1d7f1a6d18d9
SHA256: df4bb480c11d8dc85629520dac3dbf38439d4ef736563aecd7b33324462501e2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a program to merge paired end Illumina reads that are overlapping into a single longer read. It may also just be used for its adapter trimming feature without doing any paired end overlap.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqsplit-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 51
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqsplit-1.1_1.0_amd64.deb
Size: 16410
MD5sum: 1f60ea82bf6ad8944b91ccf4659350a4
SHA1: 14f3f160df71e97abed4cfac1e05a6c305f893ff
SHA256: b7be35c8e2cec9f2f05c442b1ac5156b8673ecd7f935dc2bb52429732849bfcc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Split up query into smaller overlapping chunks
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqtk-1.0-r68e
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 279
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqtk-1.0-r68e_1.0_amd64.deb
Size: 107040
MD5sum: 5eeae62bc8e35e7d6c5a95814c211693
SHA1: 00a18eb6f41231a334f36f2940888e1c4519424c
SHA256: 7c3805e8d56d187066a0fda7e56851a62e305facb216f20bd65bd519cc4a384e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip. Tabtk is a tool for processing TAB/SPACE-delimited data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqtk-1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 264
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqtk-1.3_1.0_amd64.deb
Size: 100030
MD5sum: b9d8a9d4cd5a50b3b42b35830df8a4cc
SHA1: 742d2dd80eb038d6694e43d3519557301c296eb8
SHA256: a19177845f3c21c8c033ea3434a64f7951fa991089e12ba2a47c8b2f7df98276
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip. Tabtk is a tool for processing TAB/SPACE-delimited data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqtools-4.44.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 39517
Depends: gensoft-pcre2-10.34, gensoft-harfbuzz-2.6.4, gensoft-pango-1.42.4, gensoft-gdk-pixbuf-2.36.12, gensoft-libffi-3.3, gensoft-atk-2.9.4, gensoft-fontconfig-2.13.91, gensoft-freetype-2.10.1, gensoft-gtk+-2.24.32, gensoft-libpng-1.6.37, gensoft-pixman-0.38.4, gensoft-xorg-libs-1.1, gensoft-cairo-1.16.0, gensoft-gcc-9.2.0, gensoft-curl-7.68.0, gensoft-sqlite-3.31.0, gensoft-expat-2.2.9, gensoft-glib-2.58.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqtools-4.44.1_1.0_amd64.deb
Size: 13899764
MD5sum: 080bc989f8aa827b610601cd1aa908a1
SHA1: dc2e3c5b65745e0458b675564b4d65419bce1f48
SHA256: 957f357a32b52f180b4b56d890990ed35662e4adf9542041ed2e09fd8f1e590f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A suite of tools for visualising sequence alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqwish-0.7.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 21795
Depends: gensoft-jemalloc-5.2.1, libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqwish-0.7.3_1.0_amd64.deb
Size: 5548530
MD5sum: 107cca812782a0e1e23533eee391eb9e
SHA1: 8263aa0b966ab39e1a0e1f6821c805425495b3c8
SHA256: c29e6093d3f8ccbca36b49ae799dbe87e703f83a8b09bb5797673e37f1f4b846
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: seqwish implements a lossless conversion from pairwise alignments between sequences to a variation graph encoding the sequences and their alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqwish-0.7.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1367
Depends: libc6, gensoft-jemalloc-5.2.1, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqwish-0.7.5_1.0_amd64.deb
Size: 518322
MD5sum: 3021b1ab20c568fa3a773b6d41603cc5
SHA1: 4c5ed8c73f6e19c65040dcfb19b12bd2d8139913
SHA256: 891e641a36ef5facdee3b4dd9caa7385dc24ef04ddc591e6a8bbf2d31147eec8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: seqwish implements a lossless conversion from pairwise alignments between sequences to a variation graph encoding the sequences and their alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqwish-0.7.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1381
Depends: gensoft-jemalloc-5.2.1, libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqwish-0.7.6_1.0_amd64.deb
Size: 521626
MD5sum: 8f120d718ee15b0a2c352e72892ccc55
SHA1: 3fd9a195dd1c4ec5646ea261d6e7a8b46f384fbf
SHA256: 90aa607be509e15f475d86343e90844583cab560e6e4182d58b9e0c55e3a3ea4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: seqwish implements a lossless conversion from pairwise alignments between sequences to a variation graph encoding the sequences and their alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-seqwish-0.7.8
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1346
Depends: libc6, gensoft-gcc-9.2.0, gensoft-jemalloc-5.2.1, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-seqwish-0.7.8_1.0_amd64.deb
Size: 511454
MD5sum: 20e2f43fa4c438af9d14d861986e4a03
SHA1: 609f2f0b21faa40e27673350b66b93cefebad806
SHA256: 6ee3b49090fba9bd5ec25aba9a0db4f3c2a1fd73d144f7368f519cb82baecdab
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: seqwish implements a lossless conversion from pairwise alignments between sequences to a variation graph encoding the sequences and their alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-serotypefinder-2.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 97348
Depends: gensoft-kma-1.3.4, libc6, gensoft-adm-python-3.8.1, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-serotypefinder-2.0.1_1.0_amd64.deb
Size: 28161334
MD5sum: 7003947a43bdbfc0fb103ba5ee88cf3f
SHA1: 49d301648728d99ccf26422d4caeb87c3fd20767
SHA256: 0c38ce3ec6395467a193d8f7c810f7b23d8afcfb15620c3aa9fe38da6c2cacd5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SerotypeFinder identifies the serotype in total or partial sequenced isolates of E. coli.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shapeit-2.r904
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1880
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shapeit-2.r904_1.0_amd64.deb
Size: 696142
MD5sum: 975ae14a2f583f2eb20ad8fa76e7f8f4
SHA1: 99d5fea977c7d9778cbb252c219f0a771c666e97
SHA256: e8f6901d91f120d54cfa7609ccd71d93607db0288ad875b05d6548543670aa23
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SHAPEIT is a fast and accurate method for estimation of haplotypes (aka phasing) from genotype or sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shapeit4-4.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1491
Depends: gensoft-boost-1.72.0, gensoft-htslib-1.10, gensoft-curl-7.68.0, gensoft-zstd-1.4.4, gensoft-xz-5.2.4, gensoft-gcc-9.2.0, libbz2-1.0, libssl1.1, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shapeit4-4.2.1_1.0_amd64.deb
Size: 846032
MD5sum: 1a4238c0d0107e511e6df13e0e8db4b5
SHA1: df9a01ca17aa637f29dfdd4e87d688956e38017e
SHA256: 59bc3e0ef3704a297c4ba4cd2c1baa1a813cc01c347d54ca9addf522ed4ca3a1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Segmented HAPlotype Estimation and Imputation Tool
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shapeit4-4.2.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1492
Depends: gensoft-zstd-1.4.4, gensoft-boost-1.72.0, zlib1g, libssl1.1, gensoft-xz-5.2.5, gensoft-gcc-9.2.0, gensoft-htslib-1.10, gensoft-curl-7.68.0, libc6, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shapeit4-4.2.2_1.0_amd64.deb
Size: 846898
MD5sum: 67b8713c36bc0946d451dec649b44b92
SHA1: dce362d33ae1f1d06330dd98dfb86b2fcf53b43e
SHA256: a83c5294fb08b9ab31041e303d1bf38233bc7ea22e064efd76e88a06c021fb24
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Segmented HAPlotype Estimation and Imputation Tool
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shapeit5-1.0.0-beta
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 20368
Depends: libbz2-1.0, zlib1g, gensoft-xz-5.2.5, libssl1.1, gensoft-curl-7.68.0, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shapeit5-1.0.0-beta_1.0_amd64.deb
Size: 7123704
MD5sum: 56b2364f068bb7ce8d34102c01e77cf6
SHA1: 010ec13cb7259590a4ac2342ec02e9eb305e11c0
SHA256: 2d46d9dbfd547aaefcce6eab9a1d4385a9fb0931ed64f0ff8a07f66ac3cd97e0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Segmented HAPlotype Estimation and Imputation Tool
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shapemapper-2.1.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 469195
Depends: gensoft-gcc-9.2.0, gensoft-bbmap-37.78, gensoft-xz-5.2.4, libbz2-1.0, libgcc-s1, libstdc++6, gensoft-boost-1.72.0, gensoft-adm-python-3.8.1, gensoft-ghostscript-9.50, gensoft-star-2.7.3a, gensoft-graphviz-2.42.3, gensoft-pipeviewer-1.6.6, debianutils, zlib1g, libc6, gensoft-zstd-1.4.4, gensoft-bowtie2-2.3.5.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shapemapper-2.1.5_1.0_amd64.deb
Size: 143234418
MD5sum: c6d6034739bb330d0e37ea9a55889b96
SHA1: 7b605f00ea38298544391e9b1134b4a886b2abde
SHA256: 629cb3051e2151774c151a9a83279971522a1e293c96f837177482c7db18f335
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ShapeMapper automates the calculation of RNA structure probing reactivities from mutational profiling (MaP) experiments, in which chemical adducts on RNA are detected as internal mutations in cDNA through reverse transcription and read out by massively parallel sequencing.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shigatyper-1.0.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 161251
Depends: gensoft-adm-python-3.8.1, libc6, gensoft-samtools-1.10, gensoft-minimap2-2.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shigatyper-1.0.6_1.0_amd64.deb
Size: 48578178
MD5sum: 84d43104bf85f507607700c3ea8fd141
SHA1: 7c70b4e749fc012afa7f8c29f1baaf8402f5732b
SHA256: 1ab0b08774a9d281f1f9406ec2a23ff9e9d907b9913ac3774a76e8b9d53f29a0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tool designed to determine Shigella serotype using fastq paired end reads with low computation requirement
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shigeifinder-1.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10538
Depends: gensoft-adm-python-3.8.1, gensoft-bwa-0.7.17, libc6, gensoft-samtools-1.10, gensoft-blast+-2.10.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shigeifinder-1.2.0_1.0_amd64.deb
Size: 3366816
MD5sum: 969258616ff068e8a05b7457b817dae2
SHA1: 1bfff297e65119b0370df49254bac7e93ce59f6c
SHA256: 982e5b67c5a2506bfddb23e45579366a11454c8837d0c4cd21ee02ce043ed7a6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: identify differentiate Shigella/EIEC using cluster-specific genes and identify the serotype using O-antigen/H-antigen genes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shore-0.9.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 807690
Depends: zlib1g, gensoft-gsl-1.16, gensoft-gcc-9.2.0, libbz2-1.0, gensoft-genomemapper-0.4.4, gensoft-boost-1.61.0, gensoft-openmpi-4.0.5, libc6, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shore-0.9.3_1.0_amd64.deb
Size: 182979390
MD5sum: b4bb566225da56f0dbecf6f841a950dd
SHA1: e5757ff9b3d061f9b358cb5a1a83fa5245f43175
SHA256: 6f5c4d69db6e657a59660085f79b50d9caeec757d755f9d770a63681961384a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Analysis suite for Illumina short read data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shovill-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30
Depends: gensoft-kmc-3.1.1, gensoft-megahit-1.2.9, gensoft-skesa-2.3.0, gensoft-adm-perl-5.30.1, gensoft-flash-1.2.11, gensoft-samtools-1.10, gensoft-seqtk-1.3, gensoft-spades-3.14.0, gensoft-samclip-0.2, gensoft-pigz-2.4, gensoft-pilon-1.23, gensoft-lighter-1.1.2, gensoft-velvet-1.2.10, gensoft-trimmomatic-0.39, gensoft-mash-2.2, gensoft-bwa-0.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shovill-1.1.0_1.0_amd64.deb
Size: 13094
MD5sum: ffdfcfd06caa692348f75ea9097c3911
SHA1: 59ff0c58b5adbfca76dbba4dc543bbfff6f73b06
SHA256: 07fcff24f361308d58b26101c2f7ad8a60f68d344c7ae9a91224d23e67bc911d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assemble bacterial isolate genomes from Illumina paired-end reads. Shovill is a pipeline which uses SPAdes at its core, but alters the steps before and after the primary assembly step to get similar results in less time. Shovill also supports other assemblers like SKESA, Velvet and Megahit, so you can take advantage of the pre- and post-processing the Shovill provides with those too.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-shrimp-2.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12842
Depends: zlib1g, gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-shrimp-2.2.3_1.0_amd64.deb
Size: 4508394
MD5sum: 2a0358bc264c92ec44fe58b8bee79d00
SHA1: 4585c54652a9ec84d70a97ba481eaa3511bef4a2
SHA256: fcd23f2d0cc6e46c94794a134acb29147d6ddf2b721c2551ee59feed39ef3aae
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software package for aligning genomic reads against a target genome. It was primarily developed with the multitudinous short reads of next generation sequencing machines in mind, as well as Applied Biosystem s colourspace genomic representation.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sibelia-3.0.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 25012
Depends: gensoft-gcc-9.2.0, libc6, gensoft-adm-python-2.7.17, gensoft-lagan-2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sibelia-3.0.7_1.0_amd64.deb
Size: 8631360
MD5sum: 7e4671e3f0f873f9c7fb070a64a0999c
SHA1: 6456628710d40eabbeb368e71eb56eafc8c688e2
SHA256: 8c6251bc64d92d915d80fe0ac09f0b0a700fe43bb687f32ddf4cc1ab920b9a88
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A comparative genomics tool  It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. PLEASE NOTE that Sibelai is currently installed without the variant annotation support
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sicer-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 165395
Depends: libc6, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sicer-1.1_1.0_amd64.deb
Size: 49385348
MD5sum: 3dda43e1e411f17cdd5e53f5fba81c0f
SHA1: 500a7c455a908a4ffb968bbb030b63bd7c187e15
SHA256: c7e073601d6bfa230ffe910578df7c1d36887e07eaca9c79f675539ef8539bcc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A clustering approach for identification of enriched domains from histone modification ChIP-Seq data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sickle-1.33
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 40
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sickle-1.33_1.0_amd64.deb
Size: 15538
MD5sum: 2e83d29395d13368ad86e7925df78d9f
SHA1: 4d0913497bf9d59ae31c6e870c37d13204c5a1e0
SHA256: 09d590200bed68e9d0ff5c0bb17182bc62ef94e042de350584692e4a46f8139f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Windowed Adaptive Trimming for fastq files using quality
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sig-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 81
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sig-1.0_1.0_amd64.deb
Size: 31002
MD5sum: e487b245cfd0aa9cc94fd96383433285
SHA1: 18b2da3cd7f48ea8dfe5d9a5b52a6189e7878812
SHA256: a6f88881c9189ad9dcfbb243ef2e93ec54a96cf54f7b24a343abec4095dbed3d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Multiple Prosite motifs searching
License: unknown
Vendor: Institut Pasteur

Package: gensoft-signalp-6.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 4812821
Depends: gensoft-adm-perl-5.30.1, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-signalp-6.0_1.0_amd64.deb
Size: 2736965658
MD5sum: 380400c0cfda18fb730ed918ef34b638
SHA1: 7f57178568ccd16558660d15048eed6de9c796c0
SHA256: 2cff6cf00447d2995228e08c619b78f199540c4ce205b406f0934b0c52585c6e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Predict signal peptides in proteins
License: unknown
Vendor: Institut Pasteur

Package: gensoft-silix-1.2.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 579
Depends: gensoft-boost-1.72.0, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-silix-1.2.11_1.0_amd64.deb
Size: 179672
MD5sum: 8770f11de0b45b8c40338406ce916af4
SHA1: 8b08559fc0f02b666eabc5cb2098faf30df0476a
SHA256: e7e60bad493f414cd0b360e652f12c631981ad51c6081b28b1578adf43c630de
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: clustering of homologous sequences, based on single transitive links (single linkage) with alignment coverage constraints
License: unknown
Vendor: Institut Pasteur

Package: gensoft-simde-0.7.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 18053
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-simde-0.7.2_1.0_amd64.deb
Size: 2112868
MD5sum: 63b6477ab71f932bfcde886b2fe5ecdd
SHA1: b6e7e347314b03f229b82e770be4a9aed6323feb
SHA256: 0c52b09c4c53526cead5f2df23ccb9092c731e01d1c1cdc45e8ebe27a422a0c8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Implementations of SIMD instruction sets for systems which dont natively support them
License: unknown
Vendor: Institut Pasteur

Package: gensoft-simwalk2-2.91
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5154
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-simwalk2-2.91_1.0_amd64.deb
Size: 931102
MD5sum: 4a3470a835bacdf4fe1b5e6a6af4cc2b
SHA1: 79d436e890d1e6e72d584d1ebf501e9d3ca1f0dd
SHA256: b91a0f091c029304d6a3318bd379cda017dd5ea7dbbd92ce935306b7476ad0dd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A statistical genetics computer application that uses Markov chain Monte Carlo and simulated annealing algorithms for haplotype, parametric linkage, non-parametric linkage (NPL), identity by descent (IBD) and mistyping analyses on any size of pedigree
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.5.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 68398
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.5.2_1.0_amd64.deb
Size: 32125792
MD5sum: 3b45cb12770093e9c0aa6d7715c9ff59
SHA1: 5298086e88379622e454e883f4b932b8b14f987f
SHA256: fe79b0567a50907e5a04a6ca5f141ea81cfa8797194daf7062062a5addd079e9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.5.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 68472
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.5.3_1.0_amd64.deb
Size: 32152506
MD5sum: 0a3486ec125360c7c90aea59b9c911d8
SHA1: 9de385bc872fa64e46c98457d5805d2159af7236
SHA256: 697903f1d8856ee5a87ed81c64b9e360d64db178a27cb30ae93f1e86386e4c52
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.6.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 102600
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.6.1_1.0_amd64.deb
Size: 42342750
MD5sum: bce1133a080d0d057dc5675406e5b77b
SHA1: 3e7ca255b9d8044417bc5ea4c3bb02f59a8665ea
SHA256: 77d44887451d76fca388203b096694240c0f34bb5775ae9e82d1ca87021732fe
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.6.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 102778
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.6.2_1.0_amd64.deb
Size: 42412622
MD5sum: 8ce82a10fbd6e251697846ce7b1c0465
SHA1: 2bda9c05738f7784becea22456b73ec9de81d14b
SHA256: 0622fb719df519213a3c69b9103f019a87df2faee4619cb8439203690bf9c64b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.6.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 102822
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.6.4_1.0_amd64.deb
Size: 42433168
MD5sum: 0fb7c0d3d509765b726f84af7cd1d110
SHA1: 5897fbf1a1868c610abdf4a5f5bb18ca08e8d60a
SHA256: f84f781c9de9dd2abca6423233dab5588176e4722238d5fb43127dcf20d34475
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.7.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 104403
Depends: libc6, gensoft-squashfs-4.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.7.0_1.0_amd64.deb
Size: 43070016
MD5sum: 858d7680a7c60b9dbf3d1415d426d46a
SHA1: e96c1138b3bbb190683f1649f82a1ade60cb03aa
SHA256: a15b82945f7cc3899de7d97b496a1cc62d47154e3888c42c9f0e2d7866851e87
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.7.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 105672
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.7.3_1.0_amd64.deb
Size: 43499934
MD5sum: 056faffbf1cc8ad35b888187bea5ab2c
SHA1: faf16657dc906d6546fd50d207898f0f5f12dd1f
SHA256: 508704ea4346ccd09d80dce4c1216ff4206fece4f335d92e1f0befdb7010e350
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.8.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 111085
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.8.1_1.0_amd64.deb
Size: 45675320
MD5sum: 184c9a604d6b55dac82d90080b2be90c
SHA1: b1417c3b7ea31279ebfe6113a5d2a02fce6d486c
SHA256: 9e06c8a3d442b0a8b65246bd12c7802c19a85164abe94a1182e7dee89989e39b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.8.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 111080
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.8.3_1.0_amd64.deb
Size: 45695816
MD5sum: b4703b5ee0aa41e73eb974b377dc495d
SHA1: 68dc0017d40bdbf4b74d696916b204f8d7dad49a
SHA256: ea407bb4d1ff93759d95ce2c9c64490ad4f63d3bf2c47eb467db876880f280e5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-3.8.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 88775
Depends: gensoft-squashfs-4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-3.8.5_1.0_amd64.deb
Size: 38348504
MD5sum: dbccec2099732a18178db036e25f5ca9
SHA1: 722c3219f2cfbcf8161957caa9ce61760e7702a9
SHA256: 4f4508291ba42b522d8883761ed5018bcb9d148eae5bd14c44ab1a1d1b236675
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-singularity-ce-3.8.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 110402
Depends: libc6, gensoft-squashfs-4.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-singularity-ce-3.8.0_1.0_amd64.deb
Size: 45418630
MD5sum: b765233893f7ddd7e70d515f1aa3fd5d
SHA1: 5545d6331e927aa14e602a0d565d1546c22cae66
SHA256: 3d4a2453a72f6057d37eb7a3ccdf9817a56e52626310f769bf438efc72be73f6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Singularity enables users to have full control of their environment. Singularity containers can be used to package entire scientific workflows, software and libraries, and even data. This means that you don t have to ask your cluster admin to install anything for you - you can put it in a Singularity container and run. Designed around the notion of extreme mobility of compute and reproducible science, Singularity enables users to have full control of their operating system environment. This means that a non-privileged user can swap out the operating system on the host for one they control.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sistr-cmd-1.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 281332
Depends: gensoft-mafft-7.467, libgcc-s1, gensoft-mash-2.2, libc6, gensoft-curl-7.68.0, libstdc++6, zlib1g, libssl1.1, gensoft-blast+-2.10.1, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sistr-cmd-1.1.1_1.0_amd64.deb
Size: 119317922
MD5sum: 36ee03461a4742fc623e157c1b4991b1
SHA1: 58a066bb5caeadc7e7cdc4dc607e64a4ff48efc6
SHA256: 08ca02e2671943680d93b92074e92f968228bdd4ed8b7a1ba5f8a8113df0ef00
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Serovar predictions from whole-genome sequence assemblies by determination of antigen gene and cgMLST gene alleles using BLAST. Mash MinHash can also be used for serovar prediction.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ska-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 9583
Depends: gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ska-1.0_1.0_amd64.deb
Size: 2717362
MD5sum: 7191befdbde0f652507b514ffc3c6d83
SHA1: a8449d145c7ac35674317941160b5c4be2f92226
SHA256: 9059017b198e9c080ed2fcc3ce310155baa370394fcf9aa4e05b83723808fe9a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SKA (Split Kmer Analysis) is a toolkit for prokaryotic (and any other small, haploid) DNA sequence analysis using split kmers
License: unknown
Vendor: Institut Pasteur

Package: gensoft-skesa-2.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7260
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-skesa-2.3.0_1.0_amd64.deb
Size: 2561660
MD5sum: 73609ad265a7ae73febc3d0297b25d01
SHA1: 386c493342dbc809dcb15a2b67362a817ad66591
SHA256: c7a645f638db8067558a4fb23a15342a618a7ed9331f191b644ef2bac2717fe2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SKESA is a de-novo sequence read assembler for microbial genomes based on DeBruijn graphs. It uses conservative heuristics and is designed to create breaks at repeat regions in the genome. This leads to excellent sequence quality. Using kmers longer than mate length and up to insert size also allows SKESA to attain good contiguity as determined by the N50 statistic. It is a multi-threaded application that scales well with the number of processors. For different runs with the same inputs, including the order of reads, the order and orientation of contigs in the output is deterministic.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-skesa-2.4.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 39001
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-skesa-2.4.0_1.0_amd64.deb
Size: 14383680
MD5sum: 47d7672322746d8a43c37ebf10523015
SHA1: 49e38ec3d1916f9356782d5c11d57938045b14f6
SHA256: e79b650405ed239582b96566b4abefc4a9001e378a96a80a69d273dc16f84047
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SKESA is a de-novo sequence read assembler for microbial genomes based on DeBruijn graphs. It uses conservative heuristics and is designed to create breaks at repeat regions in the genome. This leads to excellent sequence quality. Using kmers longer than mate length and up to insert size also allows SKESA to attain good contiguity as determined by the N50 statistic. It is a multi-threaded application that scales well with the number of processors. For different runs with the same inputs, including the order of reads, the order and orientation of contigs in the output is deterministic.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-skewer-0.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 204
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-skewer-0.2.2_1.0_amd64.deb
Size: 85346
MD5sum: 6ae1e2f3213dad1c12dace24d24a3de6
SHA1: 3b99e2897296b1fb3f08c0765b16ddfb30649a92
SHA256: a6fca63ddce59962de229d304555841add08b117e9426e7aa7fc6d37849912a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-slim-3.3.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 32326
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-slim-3.3.2_1.0_amd64.deb
Size: 20810064
MD5sum: ad9a980f1061d1ad352a69188c5aedcd
SHA1: d31a9aa3a5640c180a726afbe1efdd8fab841373
SHA256: ec94d9b85888036d238ab88ce0fc7aa326fea955fcda796ec67450a49c328920
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SLiM (Selection on Linked Mutations) is an evolutionary simulation package that provides facilities for very easily and quickly constructing genetically explicit individual-based evolutionary models.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-slim-3.7.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 46771
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-slim-3.7.1_1.0_amd64.deb
Size: 33397556
MD5sum: 819f0ea9e4e2faf9cd77f24491363640
SHA1: eb30bbf9c64b0203f8ea2034caca846a543e8ac3
SHA256: c25478a5f5a8896c43989f15b38dede7d99e0295bf3d5ab444132f4bd0738bf0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SLiM (Selection on Linked Mutations) is an evolutionary simulation package that provides facilities for very easily and quickly constructing genetically explicit individual-based evolutionary models.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-slim-4.0.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 47034
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-slim-4.0.1_1.0_amd64.deb
Size: 33507558
MD5sum: 59a93940ae41b517bbe717318db49df1
SHA1: 51609094d3caaf6e993f289be62a45da288f666b
SHA256: c49a31189298baef45b342d90db1f4a9926c1360cc1e691b7f9f40a5ab3f368b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SLiM (Selection on Linked Mutations) is an evolutionary simulation package that provides facilities for very easily and quickly constructing genetically explicit individual-based evolutionary models.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-smalt-0.7.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3378
Depends: gensoft-bambamc-0.0.50, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-smalt-0.7.6_1.0_amd64.deb
Size: 1462228
MD5sum: b847b34160bea7129a923a3a979bdf90
SHA1: 4eab9dcd6c62a37564c254214b35e210c86015fc
SHA256: e15fa94ec6acd8263bd2f59cd4976e964bf3cbb61defeebaf96895e8be6ecb57
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SMALT efficiently aligns DNA sequencing reads with a reference genome.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-smile-1.47
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 358
Depends: gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-smile-1.47_1.0_amd64.deb
Size: 166952
MD5sum: 5a257868dbec7380a9b5d65c252f23eb
SHA1: 030c363bbf4b71d6fb79aee29bc35608e1020ed1
SHA256: 4e7ec546fd127dddcae0a89939f1d5f60ffb179e538a6382db658b944874638c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A tool that infers motifs in a set of sequences, according to some criterias
License: unknown
Vendor: Institut Pasteur

Package: gensoft-smina-7bd30e0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1939
Depends: libbz2-1.0, gensoft-zstd-1.4.4, gensoft-openbabel-3.1.1, libc6, gensoft-xz-5.2.4, gensoft-icu-65.1, gensoft-boost-1.72.0, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-smina-7bd30e0_1.0_amd64.deb
Size: 653064
MD5sum: c7aa5ce18af3d87a26c419244f3bbedf
SHA1: 331090ff4fd5a260cd2219661c2bf73441126063
SHA256: 7ab546190284173407cf17f04455cba69079748e011cd1ef21568770db2d7589
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: smina is a fork of Autodock Vina (http://vina.scripps.edu/) that focuses on improving scoring and minimization.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-smoothxg-0.6.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 78088
Depends: zlib1g, libc6, gensoft-jemalloc-5.2.1, gensoft-zstd-1.4.4, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-smoothxg-0.6.1_1.0_amd64.deb
Size: 19405620
MD5sum: b093d326bee4c07e4642ba0975b87719
SHA1: 6924cb9b4ea7eee469d546e0a253253f211da83d
SHA256: c62dd1e67472ec7b3a74878782dce4424158b5d56222e38f173880ea075760af
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: seqwish implements a lossless conversion from pairwise alignments between sequences to a variation graph encoding the sequences and their alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-smoothxg-0.6.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 4470
Depends: gensoft-jemalloc-5.2.1, gensoft-zstd-1.4.4, zlib1g, gensoft-gcc-11.3.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-smoothxg-0.6.4_1.0_amd64.deb
Size: 1733364
MD5sum: f67cd9fd59a084ee370ffa35c07edadc
SHA1: 20c0b0168e2c514aafd55d6be65f9aba6131de03
SHA256: b21ff3daa9da28f38c56c4899d050cb8eb00344641ab1ebcc6bcbaf6878a6e76
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: seqwish implements a lossless conversion from pairwise alignments between sequences to a variation graph encoding the sequences and their alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-smoothxg-0.6.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 4492
Depends: gensoft-gcc-11.3.0, gensoft-jemalloc-5.2.1, zlib1g, gensoft-zstd-1.4.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-smoothxg-0.6.5_1.0_amd64.deb
Size: 1745510
MD5sum: 102d12cf3421a52b994e79d932157445
SHA1: 1e800870a9f6a31d4b4f33a2eb290004bbce9684
SHA256: 724f68469ce96eb95388ee30f433097925214157f43773157759afdc2daf53c6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: seqwish implements a lossless conversion from pairwise alignments between sequences to a variation graph encoding the sequences and their alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-smoothxg-0.6.8
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 4510
Depends: gensoft-gcc-11.3.0, zlib1g, libc6, gensoft-jemalloc-5.2.1, gensoft-zstd-1.4.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-smoothxg-0.6.8_1.0_amd64.deb
Size: 1748532
MD5sum: 3f8c9057b7c8e697d4818c029ccfd1cb
SHA1: 9bb10452d2146cfe414a024a8f88981839069ce8
SHA256: ce3e9bf1e194ab130f518afe4ff5a070ccb860bbba11cd00d0f8a4c891fa43a9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: seqwish implements a lossless conversion from pairwise alignments between sequences to a variation graph encoding the sequences and their alignments
License: unknown
Vendor: Institut Pasteur

Package: gensoft-smufin-0.9.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 862
Depends: zlib1g, libc6, gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-smufin-0.9.4_1.0_amd64.deb
Size: 377154
MD5sum: a486a3f137f8c8f5b1f096b43f5720de
SHA1: 2cfb580b727fd93561aec298eae0a65d1fbf4eb8
SHA256: f1b797e44bf19d8fbe1d906979fc2a32bb141b27f54a259a3635c9378b55c3fd
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SMuFin (Somatic MUtation FINder) is a reference-free method designed to identify somatic variation on tumor genomes from the direct comparison with the corresponding normal genome of the same patient
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snakemake-5.15.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 22715
Depends: libc6, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snakemake-5.15.0_1.0_amd64.deb
Size: 6324848
MD5sum: 701038748d88b48f6efa4241f767b037
SHA1: 66feb4a40629e4e08d7c74047e8c99e4a4a8e119
SHA256: 8b07ad556d9cacb95b57a4db34c9a6ad25cf1dbe4a79992ceddd2fb404a2e963
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Snakemake is a workflow management system that aims to reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and modern specification language in python style.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snakemake-5.31.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 78774
Depends: libc6, gensoft-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snakemake-5.31.1_1.0_amd64.deb
Size: 47099676
MD5sum: 3ce138aaa2de307c820a51e779c47beb
SHA1: 6034a84ae205f1ada416256d4b2d36571b9582bc
SHA256: 95d955ad8de99230f82e946c48a0a2f56f74071d4fc20f70f6c20a2e94814390
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Snakemake is a workflow management system that aims to reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and modern specification language in python style.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snakemake-6.6.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 90540
Depends: gensoft-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snakemake-6.6.1_1.0_amd64.deb
Size: 50843504
MD5sum: 11087befe6d2698311cfbbf63fe364a7
SHA1: 676e42d6789df1f2bf232711fd305ecba996e037
SHA256: 384ee6c11ebb217e286baabb791caef5b8b7b516e2eb57109bfd50a5f38f9320
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Snakemake is a workflow management system that aims to reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and modern specification language in python style.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snakemake-7.16.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 64724
Depends: libstdc++6, libgcc-s1, libc6, gensoft-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snakemake-7.16.1_1.0_amd64.deb
Size: 24409340
MD5sum: 196bf51f04afbcbafc8d097b3da7c63c
SHA1: efbe739b04d21dab518a99b4583977c7324b336b
SHA256: c9c439d0a63f5bb046bf52f02511db60bca24c83f12b9411da50e43e64122d1a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Snakemake is a workflow management system that aims to reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and modern specification language in python style.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snap-2013-11-29
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2534
Depends: gensoft-adm-perl-5.30.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snap-2013-11-29_1.0_amd64.deb
Size: 929996
MD5sum: fd2a9b223909eea439ddd42ef48ef246
SHA1: b625c2fa9417adc912277a5a3d63fccbf6a08bf3
SHA256: 49c279a45fb40b2784c2cd03766de1faf916d59b17f3287085c0c3ce427b53a0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SNAP is a general purpose gene finding program suitable for both eukaryotic and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid Parser.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snappy-1.1.10
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 201
Depends: gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snappy-1.1.10_1.0_amd64.deb
Size: 58956
MD5sum: 3dac43f84cde22125836c203c20675b4
SHA1: 53e1f33437b6a0988b887f2d0e08dd1716118313
SHA256: ce244acc96c04b322cb0cd5135713050ed4a37d7055fa0934d6d5f53d6db952f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A fast compressor/decompressor
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snappy-1.1.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 177
Depends: gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snappy-1.1.8_1.0_amd64.deb
Size: 51248
MD5sum: 680682dc4379166bf54184bce842ed3e
SHA1: 767ac94109edef8a68f39f7a73f94522c3e11d7e
SHA256: 613ba3705b73b796d9822e1e1c6fc7dad1c1fb6d7b027aa2be68c7ed913ed8c4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A fast compressor/decompressor
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snaptools-1.4.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 155223
Depends: gensoft-adm-python-2.7.17, libstdc++6, libc6, libgcc-s1, gensoft-bowtie-1.2.3, gensoft-bwa-0.7.17, gensoft-minimap2-2.17, zlib1g, gensoft-bowtie2-2.3.5.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snaptools-1.4.8_1.0_amd64.deb
Size: 51825002
MD5sum: 328a0ad8c437f863a52b064f9de88c34
SHA1: a4114364170b93c69e9933f71e10b25e0d13e2eb
SHA256: 6f9baf8c3e31117420a65070862bea56ee896220f0f183795a1770f88790d080
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A tool for working with snap files in Python.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sniffles-2.0.7
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 78535
Depends: gensoft-adm-python-3.8.1, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sniffles-2.0.7_1.0_amd64.deb
Size: 25117750
MD5sum: 78fdf988a79dc4deb1900f4d91b13ed0
SHA1: 598e0d7c6833cb643217eb92a845e3975b67bd80
SHA256: 31a6d83105fb5f230bbf24068c05b15fdd48d31fec75dcd0753ee9ebfd98a0a4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A fast structural variant caller for long-read sequencing, Sniffles2 accurately detect SVs on germline, somatic and population-level for PacBio and Oxford Nanopore read data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snippy-4.6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 18905
Depends: gensoft-samtools-1.10, gensoft-snpeff-4.3, zlib1g, gensoft-libxml2-2.9.10, gensoft-parallel-20200222, gensoft-vt-0.57721, gensoft-vcflib-1.0.1, gensoft-any2fasta-0.4.2, gensoft-emboss-6.6.0, gensoft-bwa-0.7.17, gensoft-libiconv-1.16, gensoft-expat-2.2.9, gensoft-seqtk-1.3, gensoft-xz-5.2.4, gensoft-minimap2-2.17, gensoft-samclip-0.2, gensoft-snp-sites-2.5.1, gensoft-adm-perl-5.30.1, gensoft-freebayes-v1.3.2, gensoft-bedtools-2.29.2, gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snippy-4.6.0_1.0_amd64.deb
Size: 5003140
MD5sum: d33ae914fa3bb6bc0bd2f4c3ee6deac6
SHA1: ee09d6fd29222f26e1f6513b2951149dbb312c15
SHA256: e07d247b3555f1351d22e068feb78d95aaccb6e2a3b066a38879952f921289b9
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rapid haploid variant calling and core SNP phylogeny
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snoreport-1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1874
Depends: gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snoreport-1.3_1.0_amd64.deb
Size: 385806
MD5sum: 1254705f64f404be38f54187971ff8cf
SHA1: a332d73d6345529a370fa0f1b48fa3cf2bbe241d
SHA256: 0823b385bdec32abb15beddbe31f47c7279dff90802fdc8bc482cac1b6e87800
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Computational identification of snoRNAs with unknown targets
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snp-sites-2.5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 239
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snp-sites-2.5.1_1.0_amd64.deb
Size: 73930
MD5sum: 58add02562491990791988d8ae4f8a4b
SHA1: a5b4b56aac9a363e7cdc269cc4a2f8e473d1b16b
SHA256: 26b67794378fa0fadd05011698b19cb25a6d82657ec239a28176367fd93e9c0c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Rapidly extracts SNPs from a multi-FASTA alignment
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snp2hla-v1.0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 17003
Depends: gensoft-graalvm-ce-java8-20.0.0, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, which, tcsh, gensoft-plink-1.07
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snp2hla-v1.0.3_1.0_amd64.deb
Size: 695048
MD5sum: b0d6f00f9f8020cc2a3921e30cfb0f02
SHA1: de340b3a4aaa5eb463a45763aad2cce6322b4045
SHA256: 1129307e2b823adc24a19c05439bdf5d960816633832f634180899b09f3eec32
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tool to impute amino acid polymorphisms and single nucleotide polymorphisms in human luekocyte antigenes (HLA) within the major histocompatibility complex (MHC) region in chromosome 6.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snpeff-4.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 69856
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snpeff-4.3_1.0_amd64.deb
Size: 58492682
MD5sum: 9cb6fe028f75097d91220dae9145631a
SHA1: 222227c33ac448cded2f2f9d5ce707ec4ed1618b
SHA256: 80dc0bf6f5d7433f93325d47eac628fc455f2b6d2c10ae5f78f8874f42bea3f1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Its a variant effect predictor tool, it predicts the effect of genetic variations (SNPs, insertions, deletions and MNPs)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snppar-0.4dev
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 290080
Depends: gensoft-fastml-3.11, gensoft-adm-python-3.8.1, gensoft-treetime-0.7.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snppar-0.4dev_1.0_amd64.deb
Size: 93633286
MD5sum: 1ae25ad2171d34ccccf18e28c3bf222d
SHA1: ffe38bda665c02bd77aaed5b7ab62687aad162f2
SHA256: feb14608956f0ca76291453f16aea0bcd548a529f95d3cbed2cabba836eb1963
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SNPPar is designed to find homoplasic SNPs based on a user-defined phylogenetic tree
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snpstore-1.3.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1125
Depends: gensoft-gcc-9.2.0, libc6, gensoft-zlib-1.2.11
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snpstore-1.3.8_1.0_amd64.deb
Size: 458778
MD5sum: 564f04e23b776cbde3f4d7d1de0e7152
SHA1: ba10dba4be1354e0625e0698b94e5f48f4792073
SHA256: b8591126940645ea28905276ee014c58dc779e7b52ad0b00c314cbfd5612cd96
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SnpStore is a program for SNP and indel calling in mapped next-generation sequencing read data. It features a simple threshold-based model for SNP and indel calling, and a MAQ-like Bayesian model for SNP genotype calling. Reads can optionally be realigned, using the ReAligner algorithm by Anson and Myers
License: unknown
Vendor: Institut Pasteur

Package: gensoft-snptoolkit-2.2.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 627758
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-snptoolkit-2.2.9_1.0_amd64.deb
Size: 190442140
MD5sum: 0b44a1ebb5ba24284f4ca95a7d767b32
SHA1: fc10d11deb2606d09a4accebdd5c07d306387747
SHA256: 2fb86aed312b86201c896922e06b2b2413b4cedb9d433627beee1c62ae422c65
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: snpToolkit allows users to Visualize the content of their VCF files. Filter annotate SNPs based on multiple criteria. Analyse your data using two dimentionality reduction methodsr, PCA and UMAP. WARNING. this installation DES NOT embed explore, viz nor analyse components due to security reasons
License: unknown
Vendor: Institut Pasteur

Package: gensoft-soap-2.21
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1260
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-soap-2.21_1.0_amd64.deb
Size: 544312
MD5sum: bdc27aeb698a069e84cc3c95c1fb4c36
SHA1: 1be5218af8bb901b86596117d3e278bbcbe6f269
SHA256: 5787908a760e21936776dd9e41baab2098b1b18685b4c3fdc1687d91e6def297
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Short oligonucleotide alignment
License: unknown
Vendor: Institut Pasteur

Package: gensoft-soapdenovo-2.41
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1948
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-soapdenovo-2.41_1.0_amd64.deb
Size: 895694
MD5sum: c25b86141c7325d34cba79e3779e75e4
SHA1: 25cb174182c0d2e8d6df82b5bc5bd92adcafc7cc
SHA256: bf2c834fcd5596dc3bd26e99ef3f72a29d3d4760de7bf16a33095f9e4aafacee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Short-read assembly method that can build a de novo draft assembly for the human-sized genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-soapindel-2.1.7.17
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1387
Depends: libc6, gensoft-gcc-9.2.0, gensoft-samtools-1.10, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-soapindel-2.1.7.17_1.0_amd64.deb
Size: 464246
MD5sum: 51a6837e0122ecdd0e289a1a17e908bf
SHA1: 69a2f4d03f5f586a217a91cd1c0fd36539086a0c
SHA256: 93d33081b8cdbd2a5daf77e6f44d54c52c838278816b5cc82b64f258b1745d5e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SOAPindel is focusing on calling indels from the next-generation paired-end sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-socrates-1.13.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3778
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-socrates-1.13.1_1.0_amd64.deb
Size: 3615700
MD5sum: 4f471b1c560060ee541721cc004c9097
SHA1: 7b3667b4f6a9cd5417b639cb4622389f54a1fe2b
SHA256: 6009ed6bf39f2c21810cfc87c72d236c519898d0510920e4fc608b77999a1fa8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Socrates is a highly efficient and effective method for detecting genomic rearrangements in tumours that utilises split-read data. Socrates features single nucleotide resolution, high sensitivity, and high specificity in simulated data. It takes advantage of parallelism for efficient use of resources.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-socru-2.2.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 354412
Depends: zlib1g, gensoft-blast+-2.10.0, gensoft-adm-python-3.8.1, libc6, gensoft-barrnap-0.9, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-socru-2.2.3_1.0_amd64.deb
Size: 275397136
MD5sum: e680aa6ad82dc34efd981dd17e2393e3
SHA1: d31505c249793745ebb12625f6eb9a7022c802f1
SHA256: 85ab4f69317f7b1105085510a69ad5f634010c2298d1beefab3175188fbd68a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Socru allows you to easily identify and communicate the order and orientation of complete genomes around ribosomal operons
License: unknown
Vendor: Institut Pasteur

Package: gensoft-softsv-1.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 511
Depends: libc6-dev, gensoft-gcc-9.2.0, libc6, gensoft-libbam-2.5.1, gensoft-boost-1.72.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-softsv-1.4.2_1.0_amd64.deb
Size: 250380
MD5sum: a513efc21aa822b84fbb3d7acdf82ced
SHA1: e1e9efcaa5c6b7f8fb8dd395606c865a4e2c09cd
SHA256: 86693b271e622fb0306d21c35a5c9e6e5896679ec5ccc3011a9dddc26c0bbe53
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for the detection of small and large deletions, inversions, tandem duplications and translocations from paired-end sequencing data. It uses aberrant paired-end mappings to determine approximative breakpoint regions and refines the breakpoints by analysing soft-clipped sequences for potential split-reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-solar-8.5.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 40716
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-solar-8.5.1_1.0_amd64.deb
Size: 13698082
MD5sum: a001666448ef8283241bcfc384800f17
SHA1: 7a7849fbd8e0941543d2f0bb5c3260036241d194
SHA256: f919d0bd2bd184d4dfcbbeec216c9852bf8915890570c3a8194bee98777a3299
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A package for genetic variance components analysis, including linkage analysis, quantitative genetic analysis, and covariate screening
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sonneityping-20210201
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 123706
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sonneityping-20210201_1.0_amd64.deb
Size: 38034206
MD5sum: 3659bd5d75e3cf81a7fdb9da14de7951
SHA1: 0663d856dd4970a88f390da67614b4e2e2311fd6
SHA256: 01092fe6534342930426a113e13b03c79285c8dead2a05dc04db145a28aee75c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: parses Mykrobe predict results for Shigella sonnei
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sortmerna-2.1b
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1150640
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sortmerna-2.1b_1.0_amd64.deb
Size: 514243352
MD5sum: ba53ab636bff5cbd7edd97b38fbf4970
SHA1: 0dbd7ac7caf150301ecfe91ef245713cd750c837
SHA256: 5ab9cc1843dea267a88e42c96a39259451f86da28f5d8b9685740b7fef887974
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a biological sequence analysis tool for filtering, mapping and OTU-picking NGS reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sortmerna-4.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8707
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sortmerna-4.2.0_1.0_amd64.deb
Size: 3492304
MD5sum: 3d92d3293601e8f6eafb85c9e76b7b0f
SHA1: 7af6675e8b6b68b55f1fc20ec9dd670fc4ac90ae
SHA256: 47f0a810df3f97e0a3c7e0cd932732ce2bab974e5d3ecf1766cf28a7dec24c44
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a biological sequence analysis tool for filtering, mapping and OTU-picking NGS reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sortmerna-4.3.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1013272
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sortmerna-4.3.4_1.0_amd64.deb
Size: 240307546
MD5sum: 4e15c72ea2d186186a4eb3959623cf7a
SHA1: bcef57ffcf5fc92968322d3c82cf3e3868040253
SHA256: 5ddf11001984e990c2d12ad1b2a1a4012fbdfa0655952ee74252b7c2e4391575
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a biological sequence analysis tool for filtering, mapping and OTU-picking NGS reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sortmerna-4.3.6
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1016178
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sortmerna-4.3.6_1.0_amd64.deb
Size: 241394476
MD5sum: 29eba80e630b3fd717ecdaaa10aebb73
SHA1: 95022b8614aa424f7ca9e72f18c33ee616ff0df0
SHA256: ee976aa194a13fde8704373a3d3eaf4a394b7d5bbde049436cbae45d024ac2a0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a biological sequence analysis tool for filtering, mapping and OTU-picking NGS reads.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-souporcell-2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1
Depends: gensoft-singularity-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-souporcell-2.0_1.0_amd64.deb
Size: 1924
MD5sum: 37af2b82e919ef04449d656828a8e35d
SHA1: 06e42ce0c54cc8f2e6d6357ed8ae65f59d64bb2d
SHA256: dde5f05e981df7d8739b3cbeccf494625613599da780bc314b4ac028cd052c26
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: souporcell is a method for clustering mixed-genotype scRNAseq experiments by individual.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sourcetracker-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 48
Depends: gensoft-r-3.6.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sourcetracker-1.0.1_1.0_amd64.deb
Size: 16130
MD5sum: 8e37cad481aa031bb42be5bbfb758531
SHA1: 6635bdd6e32b25e001d077e6db8e07796e7ee582
SHA256: 1494a2c62e614eef45e9ef9303be2a943104a4e49477c50bfec27b5e392c6282
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SourceTracker is a Bayesian approach to estimating the proportion of a novel community that comes from a set of source environments.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sourmash-4.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 233165
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sourmash-4.0.0_1.0_amd64.deb
Size: 75723856
MD5sum: db872ae1fece8b6355f79609f33a2080
SHA1: 01710952655ceaacdc15d5c4b3b62ca867ed162e
SHA256: a56612c0e29d5aab588bf70331bda25cf4cd2580cba7badf64f89aa2236cf7ef
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: sourmash is a command-line tool and Python library for computing hash sketches from DNA sequences, comparing them to each other, and plotting the results. This allows you to estimate sequence similarity between even very large data sets quickly and accurately.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spaceranger-1.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2510832
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spaceranger-1.2.2_1.0_amd64.deb
Size: 1227511358
MD5sum: 067979ad2ddfd539f54cd1dc6cc50b6f
SHA1: 7779c02096d260b6b7895ded25ce626060e93584
SHA256: 752059917fd88e94359adfb0ac87b5f20144e0b1848e09bf2a6102937e3ff72b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a set of analysis pipelines that process Visium spatial RNA-seq output and brightfield and fluorescence microscope images in order to detect tissue, align reads, generate feature-spot matrices, perform clustering and gene expression analysis, and place spots in spatial context on the slide image.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spaceranger-2.0.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2037062
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spaceranger-2.0.1_1.0_amd64.deb
Size: 702408064
MD5sum: 73346b20a249370dc7a582efff50e7c2
SHA1: 580784245c82cedccad15a105e71f2c437f43fc7
SHA256: e1945c0aecfde337988514349ce70908c5e8b1fdccd7bfccdd8294e8de2944ac
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a set of analysis pipelines that process Visium spatial RNA-seq output and brightfield and fluorescence microscope images in order to detect tissue, align reads, generate feature-spot matrices, perform clustering and gene expression analysis, and place spots in spatial context on the slide image.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spades-3.14.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 45835
Depends: libc6, gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spades-3.14.0_1.0_amd64.deb
Size: 17844120
MD5sum: d9c653d45ebf67eb45bca59a01a5f98d
SHA1: 9cfdd83034a58f0f2ae737ffa92840fc18398636
SHA256: a61ffdd454a638a9eab9d45ceea18bcb1bfae53e85906ad9157a90bef4f3d01c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assembler intended for both standard isolates and single-cell MDA bacteria assemblies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spades-3.14.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 46046
Depends: gensoft-gcc-9.2.0, gensoft-adm-python-2.7.17, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spades-3.14.1_1.0_amd64.deb
Size: 17903390
MD5sum: c49dbe07b7331851f533ec1b04a058d5
SHA1: 4650ee65bf40968f0597cca0ca62b7eaef75d430
SHA256: cfc7542d258f51f0c92e65a4d23f440e35a3262cedf4b6f9bb3a6412cac4d461
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assembler intended for both standard isolates and single-cell MDA bacteria assemblies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spades-3.15.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 226361
Depends: gensoft-adm-python-2.7.17, libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spades-3.15.0_1.0_amd64.deb
Size: 64895274
MD5sum: 0fb631bc8c7403a8aae86b7cd59cbbb7
SHA1: 32041ecafba28f136602198d17875c569ccc585b
SHA256: 0fe15901c632f55b127411f1a2cddcbfeaca6a026e0f919b7a951a6689d78d0b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assembler intended for both standard isolates and single-cell MDA bacteria assemblies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spades-3.15.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 232968
Depends: gensoft-adm-python-2.7.17, libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spades-3.15.2_1.0_amd64.deb
Size: 66913106
MD5sum: ebe6d968dd57d5f7d10519083c1aa377
SHA1: d54aeeacba0cdfcb1e17328e8c7e3cc98c1eb2c9
SHA256: a185c64c2367f17eda2178a422defc55462d7a54972e7c79536fe3d076fa82b7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assembler intended for both standard isolates and single-cell MDA bacteria assemblies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spades-3.15.5
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 233680
Depends: libc6, gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spades-3.15.5_1.0_amd64.deb
Size: 67096760
MD5sum: fd0bca215553684840ab322d8cec0caf
SHA1: 9f96d5311d8e47bce31311be3bac551e0184cf12
SHA256: 4e6f8f3cd4ce1b2511143e1cdb8b4c2b24a9d22225a3a712a26d97840c361735
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Assembler intended for both standard isolates and single-cell MDA bacteria assemblies
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spaln-2.4.12
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 48529
Depends: gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spaln-2.4.12_1.0_amd64.deb
Size: 22635320
MD5sum: 79f098f363c05bd03c109390333ce570
SHA1: 2bb700db5a2e0008567410dc61943e0f5a3d5a49
SHA256: 5d992c87cb79e129d193d197523a92fbfac16dff14fe3f10e68b7a34bbdb5e3f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Genome mapping and spliced alignment of cDNA or amino acid sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sparsehash-2.0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 805
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sparsehash-2.0.3_1.0_amd64.deb
Size: 176356
MD5sum: 8b095fddf9c5dea246b035fbdd355d4c
SHA1: c94c108d3024ef73f64ef59cecca135493112a17
SHA256: b2e54a34a0ed27e9d34c7d4f8ccee6317b94695df3507209a4bf2a5ae848ffed
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An extremely memory-efficient hash_map implementation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sparsepp-1.22
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 344
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sparsepp-1.22_1.0_amd64.deb
Size: 78914
MD5sum: c63dbb9eb3f283ba7ddb1701997950a2
SHA1: ad8f5c759d626683159a7ea2e92cce58279c88c5
SHA256: 14d3926eb5fe585fed98efda9395f51ebabb22d993b868a96072c57ce93f5d8a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A fast, memory efficient hash map for C++
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spectra-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 354
Depends: gensoft-eigen-3.4.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spectra-1.0.1_1.0_amd64.deb
Size: 69984
MD5sum: 38afc489634ff226a9efdd1d853ac748
SHA1: 226805e2d1035da5cfc0e62c8a194d12e0d4e332
SHA256: 552f22698a65a01db7d402aa3092bf5073da11cec17a42b1e28ea091ec653ee7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A header-only C++ library for large scale eigenvalue problems
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sphinx-2.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 118468
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sphinx-2.3.1_1.0_amd64.deb
Size: 42947676
MD5sum: 288eee74e473f4d23e3595842b116ac1
SHA1: 9ae7e6f104e167a09d44680d5b4ecc98366a2a03
SHA256: 95ece6c3e058f895893424bbba997159d73e55c1fd1cc5abe733f04a0948af5b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Sphinx is a tool that makes it easy to create intelligent and beautiful documentation for Python projects
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spladder-2.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 346764
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spladder-2.4.2_1.0_amd64.deb
Size: 106117066
MD5sum: 40d65f0dd455d9e918b388b2cbf5730a
SHA1: e4e9b082813aa177ddff500365bb529f57e97219
SHA256: d00dd8ff5bbe41c2fc319627fef5fb85c6a0f2cebb0a92a6c3b9af91ee75ca51
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Splicing Adder, a toolbox for alternative splicing analysis based on RNA-Seq alignment data. Briefly, the software takes a given annotation and RNA-Seq read alignments in standardized formats, transforms the annotation into a splicing graph representation, augments the splicing graph with additional information extracted from the read data, extracts alternative splicing events from the graph and quantifies the events based on the alignment data, The quantified events can then be used for differential analysis.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-splazers-v1.3.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2056
Depends: libc6, zlib1g, libbz2-1.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-splazers-v1.3.8_1.0_amd64.deb
Size: 667438
MD5sum: af90ccf440ddd4c14b68b681c299f689
SHA1: 851d6b2d383f9569338d2cfdf5fd7227b2f81cb5
SHA256: 456dd425290236dad677482b7ba0f288275791d6b1e035d38c056effdfb8efa5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tool SplazerS for mapping reads containing structural variants
License: unknown
Vendor: Institut Pasteur

Package: gensoft-splicemap-3.3.5.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1987
Depends: gensoft-gcc-9.2.0, libc6, gensoft-bowtie-1.2.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-splicemap-3.3.5.2_1.0_amd64.deb
Size: 736386
MD5sum: 456491e49d05521ec70221adc693ad38
SHA1: 8ce904e4d47606fd9cf543de65fad41f1aac7bd6
SHA256: 187bd290207635ebffd1a5fcac453d5e8a7732d01dabdf03d5f5b58f9ce567ad
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: de novo splice junction discovery and alignment tool
License: unknown
Vendor: Institut Pasteur

Package: gensoft-spread3-0.9.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3401
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-spread3-0.9.6_1.0_amd64.deb
Size: 3081686
MD5sum: 958e482ac05b2ca4d58adc02453d131e
SHA1: e691049f9f1e036512b86fc980c9d31301dffaf7
SHA256: e56a630345b53845d5a196a62ebb7e34ceeb3b88d81af71d27f2ee3991eb5eca
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a user-friendly application to analyze and visualize pathogen phylodynamic reconstructions resulting from Bayesian inference of sequence and trait evolutionary processes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sprime-07dec18.5e2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 226
Depends: gensoft-graalvm-ce-java11-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sprime-07dec18.5e2_1.0_amd64.deb
Size: 221722
MD5sum: a53ba954522b3db7a5ecc8c96a533a09
SHA1: 1f7eb548b64c1fd8b2e1cd784ff0b227f04d407d
SHA256: f4aab32501ddeb6e6f802299dafea338a1645210583db2b6494ef8d9cf092a15
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: identifies variants that are introgressed from archaic populations
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sqlite-3.31.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5587
Depends: libtinfo5, libreadline8, zlib1g, libncurses5, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sqlite-3.31.0_1.0_amd64.deb
Size: 1998270
MD5sum: ee2dc608e19098f7ae4e0377a255fd8d
SHA1: 6830dde45d2a6cd156f6af5099a45609eb7761ba
SHA256: 518fc70c91f435db87271e351886c5f28202c0ecb481c8e77043512342a224da
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SQLite is an in-process library that implements a self-contained, serverless, zero-configuration, transactional SQL database engine.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-squashfs-4.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 337
Depends: zlib1g, libc6, gensoft-xz-5.2.4, gensoft-lzo-2.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-squashfs-4.4_1.0_amd64.deb
Size: 147958
MD5sum: 81e4d01c97f71e13bae0d42ad2434140
SHA1: 7f0c1b2d51712ac5d0cb60266092339a8d9634df
SHA256: d3205d590d4752e61b2633bf395322189023355f96e4c0eea6778d3723c9c3ba
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Squashfs is a highly compressed read-only filesystem for Linux. Squashfs compresses both files, inodes and directories, and supports block sizes up to 1Mbytes for greater compression. It is implemented as a kernel module under VFS.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-squizz-0.99c
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 4638
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-squizz-0.99c_1.0_amd64.deb
Size: 1603162
MD5sum: 1e29eae4b9a0a2e7cffa6a2854823fad
SHA1: f96d6c6b0242c9f09461a27b0174589ed84c091c
SHA256: c715efe772fcd06201815c5cd2aeb2d31e8c162058bdfac4f328df8841f57490
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Sequence/Alignment format checker
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sra-sdk-2.10.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 199132
Depends: gensoft-libiconv-1.16, gensoft-xz-5.2.4, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sra-sdk-2.10.2_1.0_amd64.deb
Size: 81319468
MD5sum: fbd9fafe3c72bc797a25c50504e4c8f4
SHA1: 5a4fb5012f06c859e2a96787111b794d1e955ef8
SHA256: 83540714339746c4712db3ecd02fd28e8ab4722e581f2aa8db301303ffa3bd0a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Sequence Read Archive (SRA) stores raw sequencing data from the next generation of sequencing platforms including Roche 454 GS System, Illumina Genome Analyzer, Applied Biosystems SOLiD System, Helicos Heliscope, Complete Genomics, and Pacific Biosciences SMRT
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sra-sdk-2.11.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 292645
Depends: gensoft-xz-5.2.4, gensoft-libiconv-1.16, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sra-sdk-2.11.2_1.0_amd64.deb
Size: 119760910
MD5sum: b8abdea7dc2c4895a0eb402589e4f189
SHA1: 1d24c21afb5ce1686a0a215bf05e3e5bf96f51e0
SHA256: 2afbe856d044fb9dac1f1740a3abc67e772bdee905865178a83234c3eb8d1ab1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Sequence Read Archive (SRA) stores raw sequencing data from the next generation of sequencing platforms including Roche 454 GS System, Illumina Genome Analyzer, Applied Biosystems SOLiD System, Helicos Heliscope, Complete Genomics, and Pacific Biosciences SMRT
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sra-tools-3.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 945221
Depends: zlib1g, gensoft-libxml2-2.9.10, libc6, libbz2-1.0, gensoft-libiconv-1.16, gensoft-hdf5-1.10.6, gensoft-gcc-9.2.0, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sra-tools-3.0.0_1.0_amd64.deb
Size: 325658622
MD5sum: e01f2968c7922bf862f62c6d2c9957f2
SHA1: 2cc15a1929be98779ecded8c5f7b41cd1ca87b75
SHA256: 87d3b3278df0e93bcb8f4fbc50b9d39c3f24a254ccd15e7ef5bf718c7b7d24c7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives
License: unknown
Vendor: Institut Pasteur

Package: gensoft-srprism-2.4.24
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1571
Depends: libc6, gensoft-gcc-9.2.0, zlib1g, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-srprism-2.4.24_1.0_amd64.deb
Size: 538788
MD5sum: 12fb5d6353f317f97f96fe7ac828f650
SHA1: 72929ec47398465fb74b5b5ab39ee424197315f4
SHA256: 276ed6c5be5df2c95988a8be2a4987aebd65c3721a24d8402c6fd8a34f313ec5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Single Read Paired Read Indel Substitution Minimizer
License: unknown
Vendor: Institut Pasteur

Package: gensoft-srst2-0.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 190359
Depends: gensoft-samtools-0.1.18, gensoft-r-3.6.2, gensoft-adm-python-2.7.17, libstdc++6, libgcc-s1, gensoft-bowtie2-2.1.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-srst2-0.2.0_1.0_amd64.deb
Size: 54642176
MD5sum: 565626e87662f5dc82eb00c8ca13bd2d
SHA1: 0af0f31dfdd2d01e6266e62082241f70ab60b965
SHA256: f7c17e874f8c825f2f30a4c0d4e5f5b20a30e3a9ee1b8d16dce3b412c25d8b67
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ssaha2-2.5.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2496
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ssaha2-2.5.5_1.0_amd64.deb
Size: 1170334
MD5sum: ec3b079b6769389ceb8f1b71f6983726
SHA1: 8cfa67bccae8b44e9cea3e21f6cbc3e5b4452439
SHA256: d951cd8f4d537b180ec212af26f0ac11435447723f58b90d672aac5f8b90f599
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A pairwise sequence alignment program designed for the efficient mapping of sequencing reads onto genomic reference sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ssp-1.1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 664
Depends: gensoft-boost-1.72.0, gensoft-gsl-2.6, libc6, gensoft-adm-perl-5.30.1, gensoft-samtools-1.10, gensoft-zlib-1.2.11, gensoft-gcc-9.2.0, gensoft-bamtools-2.5.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ssp-1.1.3_1.0_amd64.deb
Size: 220228
MD5sum: 12ce99730a72b0567c888b34de8da98e
SHA1: c44350e145acca50b30f0a946eb6c919e5b36b5b
SHA256: b247bec3f156d96c1659ae194da60693eaf6bc3cee963a90407e72cc2b6a45bb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SSP (strand-shift profile) is a tool for quality assessment of ChIP-seq data without peak calling.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ssw-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 182
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ssw-1.1_1.0_amd64.deb
Size: 56474
MD5sum: 07970f3a7ba858fd9a02377a6588aa4a
SHA1: 8dd872473724cef96b0594b09e5be7abe5622ed9
SHA256: 75b832fce49faa096ea691888dc0fe71263e9e903fb8045428d89fb5bc810a33
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-staden-io-lib-1.14.15
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 12456
Depends: zlib1g, gensoft-zstd-1.4.4, libc6, gensoft-xz-5.2.5, gensoft-curl-7.68.0, gensoft-libdeflate-1.8, libbz2-1.0, libssl1.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-staden-io-lib-1.14.15_1.0_amd64.deb
Size: 3779580
MD5sum: 93292361e38e3762e9e5d314450e019c
SHA1: b0d2452d3cb8ecd85989d1e0ab6e51bed7ebb8d1
SHA256: 03741b61a4bf420dbe9420a03d7fc49ccb6cdfa808e9c162279c20e158514b8e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Staden Package "io_lib". This contains code for reading and writing a variety of Bioinformatics / DNA Sequence formats.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-stampy-1.0.32
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 11602
Depends: gensoft-gcc-9.2.0, libc6, gensoft-adm-python-2.7.17, gensoft-bwa-0.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-stampy-1.0.32_1.0_amd64.deb
Size: 3426002
MD5sum: 77f152fbfbbfe17b4b2b6b747587f24a
SHA1: e9d9223bd0149851657964da736e564677ed4f6e
SHA256: a887bf214fcaf6b73a0c1936fe70cd9d2c66b36e7761fb845cfe9a33b0afa0f7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: mapping of short reads from illumina sequencing machines onto a reference genome
License: unknown
Vendor: Institut Pasteur

Package: gensoft-star-2.5.0a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2398
Depends: zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-star-2.5.0a_1.0_amd64.deb
Size: 1009434
MD5sum: 1bb3b49e5fe8cbf35f6197ce96289fe4
SHA1: b9bd930a23771599a4f9bc0a8e7b773ad6bad544
SHA256: 7ff2deb768199dfbea68cc331fd9b3cb85d52ff001db85f16dfdb98c14c7fe74
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: aligns RNA-seq reads to a reference genome using uncompressed suffix arrays.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-star-2.7.3a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2935
Depends: gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-star-2.7.3a_1.0_amd64.deb
Size: 1239116
MD5sum: 85d0e81f4a9a274e813dbec31d744659
SHA1: 8a6af001e0f4d6becf479843cc900a4391928e38
SHA256: 843cd988c8b33afd79a54d3411e6f668b9d4d728df7229699023cfa7be1b24b5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: aligns RNA-seq reads to a reference genome using uncompressed suffix arrays.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-star-2.7.6a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3145
Depends: gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-star-2.7.6a_1.0_amd64.deb
Size: 1368666
MD5sum: 20c21c012d4153721ce61ac4a4358d46
SHA1: 7c734ad7702b12a54cde1b45eb65dceb5874e31a
SHA256: e0b1f67dbe16f76911a06d6d8fc586b0c3ba1865673bba4bdade8c2bfb424cd0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: aligns RNA-seq reads to a reference genome using uncompressed suffix arrays.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-star-2.7.8a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6269
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-star-2.7.8a_1.0_amd64.deb
Size: 2482572
MD5sum: 4b8433aa3b331bb48913eb5d674d4894
SHA1: 1327ff450fd8f84126105bd7c3ef5a081c162ef5
SHA256: 671c812c66576611f8f0c36653d4b7736d188b981e1b7b06d873066eba20c313
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: aligns RNA-seq reads to a reference genome using uncompressed suffix arrays.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-star-2.7.9a
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6333
Depends: libc6, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-star-2.7.9a_1.0_amd64.deb
Size: 2509540
MD5sum: 6c9c9e1576224e6de597d9f6f3f4e30d
SHA1: 5e300db6c9d2fce233cdeee9b8dd6a875dd782a1
SHA256: d2cc7631f4d5b5a34f4ec1022971fb5475f8aeba5dbf4590e361f2308f7aaec2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: aligns RNA-seq reads to a reference genome using uncompressed suffix arrays.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-steme-1.9.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 143298
Depends: gensoft-fftw-3.3.8, libc6, gensoft-ghostscript-9.50, gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, gensoft-boost-1.72.0, libgcc-s1, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-steme-1.9.6_1.0_amd64.deb
Size: 44403036
MD5sum: 6fba1f83ab31dd11f893355294c6e808
SHA1: 4fc15c70842c95f812e0bb98d3e4b227edebac0a
SHA256: e8c0ba67ae2b562e481859e25490914b3cec1ab45e7f6d680be74e4c46a97ce7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: STEME started life as an approximation to the Expectation-Maximisation algorithm for the type of model used in motif finders such as MEME. STEME s EM approximation runs an order of magnitude more quickly than the MEME implementation for typical parameter settings. STEME has now developed into a fully-fledged motif finder in its own right.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-streamvbyte-0.5.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 91
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-streamvbyte-0.5.1_1.0_amd64.deb
Size: 22272
MD5sum: 568918193bc5cb73ab8c5b3db2ea8104
SHA1: 3e355ad280c194b802ed0387c5a3a554c7ca2ecf
SHA256: 5284ebaa7dea5fa24df523e9fb5bfc62ccd787bcf50cf1213fb0bbdb676ac03f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fast integer compression in C using the StreamVByte codec
License: unknown
Vendor: Institut Pasteur

Package: gensoft-strelka-2.9.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 252447
Depends: gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-strelka-2.9.10_1.0_amd64.deb
Size: 76925614
MD5sum: 78031521b04e4417886674897e99c10e
SHA1: 298aa507727b78d76a23a4b3add9b096cd2d74bb
SHA256: a7601b0c45e1454f9e9ce5a84e4ccfcbd84e7ba7a1b9a87d4b15268120234249
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Strelka is an analysis package designed to detect somatic SNVs and small indels from the aligned sequencing reads of matched tumor-normal samples.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-stringtie-2.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6828
Depends: zlib1g, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-stringtie-2.1.1_1.0_amd64.deb
Size: 2221152
MD5sum: bcf79c0c6bd55a81dbb45a86e9080880
SHA1: 3513e46543d5e26f4538dacf0b08ca5c83c1f9f2
SHA256: 01d9728653b40177ea2d7f024066f55437909670ae1a5b83e4945c89ab2740b5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts. It uses a novel network flow algorithm as well as an optional de novo assembly step to assemble and quantitate full-length transcripts representing multiple splice variants for each gene locus.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-structure-2.3.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2300
Depends: libc6, gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-structure-2.3.4_1.0_amd64.deb
Size: 1973312
MD5sum: 74d4faa56befbdaa4b4f5bd3189d8434
SHA1: ed75640c1b3d86963d23afbf35f427e0f446234a
SHA256: 8c656accfafa9e01a104c4fe02cf994147f0c0d88ab241ee2bf620a8ace6082f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The program structure is a free software package for using multi-locus genotype data to investigate population structure.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-stxxl-1.4.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 8852
Depends: gensoft-zstd-1.4.4, gensoft-gcc-9.2.0, zlib1g, libc6, gensoft-xz-5.2.4, gensoft-boost-1.54.0, libbz2-1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-stxxl-1.4.1_1.0_amd64.deb
Size: 1965404
MD5sum: f2f38ae1760ea5cbd8d481242d740b1d
SHA1: a6a3862a1206a3cb6bca6ee18997d68edaf606a1
SHA256: 3843782486b94e2285e9e08767b10f824ef2ee23acc9312e903048edd4e9991d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Standard Template Library for Extra Large Data Sets.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-subread-2.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 72529
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-subread-2.0.0_1.0_amd64.deb
Size: 24465994
MD5sum: ffabcbb05c4c2ceadbdb950e852a713f
SHA1: 542e7566842f7f29cd00f151082f6186fdb8d783
SHA256: 00e0000897daa1782eab11e54fe393bbbb88a405dc08769a2670b842faba3f8a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: high-performance read alignment, quantification and mutation discovery.  The Subread package comprises a suite of software programs for processing next-gen sequencing read data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-suitesparse-5.6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 7161
Depends: gensoft-openblas-0.3.7, gensoft-gcc-9.2.0, libc6, gensoft-atlas-3.10.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-suitesparse-5.6.0_1.0_amd64.deb
Size: 4300206
MD5sum: f54a2e53febcaf2bce9a93539f2ee0d7
SHA1: b5e8413508b75cc699a76b9c581467ff116d0701
SHA256: b45830c79bcb09abecdb45eae5345abc5cdcc03a6927f571d09d4ca51e0a227d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SuiteSparse is a suite of sparse matrix algorithms, including UMFPACK multifrontal LU factorization.  CHOLMOD supernodal Cholesky. SPQR multifrontal QR.  KLU and BTF  sparse LU factorization, well-suited for circuit simulation.  Ordering methods (AMD, CAMD, COLAMD, and CCOLAMD). CSparse and CXSparse a concise sparse Cholesky factorization package for my SIAM book. UFget a MATLAB interface for the UF Sparse Matrix Collection spqr_rank a MATLAB package for reliable sparse rank detection, null set bases, pseudoinverse solutions, and basic solutions.  Factorize an object-oriented solver for MATLAB (a reusable backslash). SSMULT and SFMULT sparse matrix multiplication. And many other packages
License: unknown
Vendor: Institut Pasteur

Package: gensoft-suma-package-v1.0.34
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 311
Depends: zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-suma-package-v1.0.34_1.0_amd64.deb
Size: 212002
MD5sum: 3488b2ba144296452f5860a76d170464
SHA1: 13f857844748e04fc5ccd30a57749f5a27ff98f8
SHA256: 0bae88519ec2dcddc5b200eb6648449b8ea06770579254e2ed4ebfc7a7087933
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SUMATRA and SUMACLUST fast and exact comparison and clustering of sequences. SUMACLUST and SUMATRA aim to compare sequences in a way that is fast and exact at the same time. These tools have been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-superfold-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 113743
Depends: libgcc-s1, gensoft-adm-python-2.7.17, libc6, gensoft-rnastructure-6.3, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-superfold-1.0_1.0_amd64.deb
Size: 37447992
MD5sum: 604b6b633e60d51fe1ce2a9fa2e79918
SHA1: 9070a251d11bc617712bcdcc0c161a63a5e295a1
SHA256: 35a807626d884fb56d20523f551339eb6fc2e778610c9725e416ada0940a6888
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SuperFold is a pipeline that then uses these data to model RNA secondary structures, including pseudoknots; identify de novo regions with well-defined and stable structures; and visualize most probable and alternative helices.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-svclone-0.4.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 340705
Depends: gensoft-adm-python-2.7.17, gensoft-gcc-9.2.0, gensoft-r-3.6.2, gensoft-xz-5.2.4, gensoft-libxml2-2.9.10, gensoft-curl-7.68.0, gensoft-libiconv-1.16, gensoft-libgit2-0.28.4, gensoft-libssh2-1.9.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-svclone-0.4.0_1.0_amd64.deb
Size: 114176358
MD5sum: e70c5f687108316107c7dd70d06cf155
SHA1: 0780981fdf26a76d8c7e24a10bf7ce8e9968439d
SHA256: ca71e64f1924e8d786044054c1d8b5cc0e3217a788e8d5ea25a9db56aef0fead
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A computational method for inferring the cancer cell fraction of tumour structural variation from whole-genome sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-svseq2-2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 301
Depends: gensoft-gcc-9.2.0, gensoft-libbam-0.1.19, libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-svseq2-2_1.0_amd64.deb
Size: 129796
MD5sum: 9882b90b30bc8f320b81bc82fc655006
SHA1: 9ee7c49d05b663e568ed19e3b4fe10067393f0c1
SHA256: fcd54a2b02600efb7144e3705059d59ecc420e5f6338dbc214c1a3c18cbe28ba
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An improved approach for accurate and efficient calling of structural variations with low-coverage sequence data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-svtyper-0.7.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 255136
Depends: gensoft-r-3.6.2, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-svtyper-0.7.1_1.0_amd64.deb
Size: 74125878
MD5sum: 34d80b3ba641e2f98916fddc21f79188
SHA1: 4da160d35cf4947b06f00fd912f4e0b362465ce0
SHA256: b19704b08ce2b29a62be3d84bfb8bafa467410e888e8ffd36edaabf39426f58c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Bayesian genotyper for structural variants
License: unknown
Vendor: Institut Pasteur

Package: gensoft-swarm-3.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 20236
Depends: libc6, zlib1g, gensoft-gcc-9.2.0, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-swarm-3.0.0_1.0_amd64.deb
Size: 6953984
MD5sum: 71a5198de8204daa8821c09c0e5ce07f
SHA1: 386063b6c818dcb97aceb114920672c49d8c78d5
SHA256: eb7138a87d0315f3de93daef60f8ae97640effbdc866aea432dceeab4a6fcab6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A robust and fast clustering method for amplicon-based studies. The purpose of swarm is to provide a novel clustering algorithm to handle large sets of amplicons. Traditional clustering algorithms results are strongly input-order dependent, and rely on an arbitrary global clustering threshold. swarm results are resilient to input-order changes and rely on a small local linking threshold the maximum number of differences between two amplicons. swarm forms stable high-resolution clusters, with a high yield of biological information.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sweed-4.0.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 643
Depends: gensoft-gmp-6.2.0, gensoft-mpfr-4.0.2, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sweed-4.0.0_1.0_amd64.deb
Size: 416056
MD5sum: f3b47b90b5baf3a05e249d624d1f53a5
SHA1: 3182149c7682d9905bbcff2f81c7da1ac90c3a1c
SHA256: ddd44b6a74f4862938024b8c7a486753e140897fe643c5cf5e9430f5c8a14931
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SweeD implements a composite likelihood ratio test which detects complete selective sweeps using Site Frequency Spectrum (SFS) patterns of single-nucleotide polymorphisms (SNPs).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-swig-4.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 45656
Depends: libc6, gensoft-gcc-9.2.0, gensoft-pcre-8.43, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-swig-4.0.1_1.0_amd64.deb
Size: 11006550
MD5sum: 7bb525c2687802a0a688bf500829d0e8
SHA1: cd338a321ff63638ac6798a64d114cfaf9493691
SHA256: 86eb7264a8c13dcda62d1f1f3e5d5721a2024deea74fe9e116e90aa608327357
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a software development tool that connects programs written in C and C++ with a variety of high-level programming languages.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sword-1.0.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1804
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sword-1.0.4_1.0_amd64.deb
Size: 398230
MD5sum: b5e6c1495f94c60ed015fb282105f870
SHA1: a47d388404683f2de223ac15b075faddc90733a4
SHA256: 8aa84093dafe9d38320f6a0dc0d6329d4c44268224b4eccda56cacaa67705842
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SWORD (Smith Waterman On Reduced Database) is a fast and sensitive software for protein sequence alignment.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-symphony-5.6.17
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 964
Depends: gensoft-glpk-4.65, gensoft-dylp-1.10.4, gensoft-lapack-3.9.0, gensoft-clp-1.17.6, libc6, gensoft-vol-1.5.4, gensoft-osi-0.108.6, gensoft-coinutils-2.11.4, gensoft-gcc-9.2.0, gensoft-cgl-0.60.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-symphony-5.6.17_1.0_amd64.deb
Size: 401820
MD5sum: f2d2b54c33e915922517f1e42aaad36b
SHA1: e68134075bbaa9516637ed397b6c71d54dd30bd7
SHA256: 4d5e864992bbe0a9830393e7502d914d089f4905f9460eda470a5eca327995f6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: SYMPHONY is an open-source solver, callable library, and development framework for mixed-integer linear programs (MILPs) written in C with a number of unique features
License: unknown
Vendor: Institut Pasteur

Package: gensoft-syntviewtools-0.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 24
Depends: gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-syntviewtools-0.0.1_1.0_amd64.deb
Size: 9764
MD5sum: 2b8ae92d751d0c45a8dfc81b1e9799f6
SHA1: b8ccb34e31dd076a6b37f14b41845fa2a4b813e4
SHA256: e855506a8153846cfa9f184b61bc0814c92e8fed254bfa7e7184d0676b382d57
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Specific tools for pre-processing datas in order to use them in SynTView
License: unknown
Vendor: Institut Pasteur

Package: gensoft-sz-2.1.12.5
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 7423
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-sz-2.1.12.5_1.0_amd64.deb
Size: 2830586
MD5sum: 872f450faedb4c0e8012c3ba824d40f0
SHA1: 71b9df9611b130809ee87442d600ac64beb135ec
SHA256: df850fcbf62f2be883432e5d4071134e837e5fb6f5fd7b13a0956b3dfe6674f4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Error-bounded Lossy Data Compressor (for floating-point/integer datasets)
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tabix-0.2.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1438
Depends: zlib1g, libc6, gensoft-adm-perl-5.30.1, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tabix-0.2.6_1.0_amd64.deb
Size: 590420
MD5sum: ff7bf096764b6eeed3ad08527cbc27d4
SHA1: ca1f1b4e2854ccc71ca8b1d8e5a4e431ef7382fd
SHA256: 4e7ffb03bd33e8d7f959797b262f8f79f0d6c9506bd930342623986f2fa70400
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Generic indexer for TAB-delimited genome position files bgzip Block compression/decompression utility
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tabixpp-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 988
Depends: gensoft-htslib-1.10, libssl1.1, zlib1g, gensoft-curl-7.68.0, libc6, libbz2-1.0, gensoft-xz-5.2.4, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tabixpp-1.1.0_1.0_amd64.deb
Size: 259236
MD5sum: 3e938fda1b293adeca5f1fd205dee379
SHA1: ae2925dde15a824667917aa72f6c1b78b70ccd57
SHA256: 30346bbcf134fe80f626aa0840f514ae864b1df37974b00416c65cc3802a1ac4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This is a C++ wrapper around tabix project which abstracts some of the details of opening and jumping in tabix-indexed files. installed version built on top of htslib/1.9
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tacg-4.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1866
Depends: gensoft-ghostscript-9.50, libc6, gensoft-pcre-8.43
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tacg-4.1.0_1.0_amd64.deb
Size: 667426
MD5sum: 9794c5a03abc1eccc76d483c1feb18b5
SHA1: fee1af29d1436c7f528fc9fbadedccb0dc33b58b
SHA256: 95d269d30d8d54e11ee574788eeffc256d592376ba8008e8a56c2fca9d80f83e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Finds  short patterns and specific combinations of patterns in nucleic acids, translates DNA vs protein
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tangram-0.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 41714
Depends: gensoft-adm-python-2.7.17, zlib1g, libc6, gensoft-gcc-9.2.0, gensoft-bedtools-2.29.2, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tangram-0.3.1_1.0_amd64.deb
Size: 11994836
MD5sum: 6681d3221209c6232aee41f854655002
SHA1: 4fb106c5fe4a228ddf6eeffa66e0e97dc410b9f6
SHA256: d74e743ff6223831267cc2ea539cf8b5220666bd0f7a84802a00666b4692ab07
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fast Structural Variation Detection Toolbox
License: unknown
Vendor: Institut Pasteur

Package: gensoft-taxadb-0.12.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14253
Depends: gensoft-sqlite-3.31.0, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-taxadb-0.12.0_1.0_amd64.deb
Size: 4222116
MD5sum: 539d31bc5b6e31d541034a9920b682f4
SHA1: 2223a9de46ee72b144aea59f6873acadbfaf75f6
SHA256: 1007674000b0d7bb49e8faa5f159947c81106a469a1d0e94d4d0073732ec7afb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Taxadb is an application to locally query the ncbi taxonomy
License: unknown
Vendor: Institut Pasteur

Package: gensoft-taxator-tk-1.5.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 9727
Depends: gensoft-gcc-9.2.0, gensoft-last-1180, gensoft-orfm-0.7.1, gensoft-adm-python-2.7.17, gensoft-boost-1.72.0, gensoft-lz4-1.9.2, libc6, gensoft-icu-65.1, zlib1g, gensoft-blast+-2.12.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-taxator-tk-1.5.0_1.0_amd64.deb
Size: 2969810
MD5sum: 7742d9922db49c6aab8c966eee8a0695
SHA1: a7d93130aa1dda88dceb636a61cbfaa8f52a2008
SHA256: 74e4a5a8a0d3d01c8340c411b05696a8fbabeb137f3542527353c817d5c2c0fa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A set of programs for the taxonomic analysis of genetic sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-taxo-rrna-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12608
Depends: libc6, gensoft-adm-python-2.7.17, gensoft-db-5.3.28
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-taxo-rrna-1.1_1.0_amd64.deb
Size: 3733622
MD5sum: 713d87b886f9bf55e058b6adabf7a567
SHA1: 4c87a08219e02df48efa4bea231171608bf14fbc
SHA256: 250f7abb05d75406b3171a073257e56338eb1134a71fb5fa7b949996fa7efee6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Simple python program used to format Silva and Greengenes 16S databases
License: unknown
Vendor: Institut Pasteur

Package: gensoft-taxodb-ncbi-1.3.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12658
Depends: gensoft-db-5.3.28, gensoft-adm-python-2.7.17, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-taxodb-ncbi-1.3.4.1_1.0_amd64.deb
Size: 3749426
MD5sum: 13d5f1d5357a9194857aaeff7051b6ef
SHA1: 2481859dfc6583987ba3f3b270f65bfefb507b8d
SHA256: 6323b966e5bb073888c76998e4a8895d3d621bf0cb92e5137786559e729a422b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Simple python program used to format NCBI Taxonomy Database
License: unknown
Vendor: Institut Pasteur

Package: gensoft-taxonomy-97aef0c05300
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 104
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-taxonomy-97aef0c05300_1.0_amd64.deb
Size: 41600
MD5sum: cab7dd5d88a72ddddcf77a3413e3ad72
SHA1: 7ddfb9811e13257eb2d4cedd3e3f741ec19d4f53
SHA256: a0045901407a5ed60bb51a234ae19b7c7b4efc2be54d75623fe6f3d328309fc3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: gb_taxonomy tools known to work with Galaxy tool definitions
License: unknown
Vendor: Institut Pasteur

Package: gensoft-taxoptimizer-2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13047
Depends: gensoft-xz-5.2.4, gensoft-blasttaxoanalysis-1.0, libc6, gensoft-zlib-1.2.11, gensoft-libjpeg-turbo-2.0.4, gensoft-xorg-libs-1.1, gensoft-libgd-gd-2.2.5, gensoft-db-5.3.28, gensoft-golden-3.4.1, gensoft-libtiff-4.1.0, gensoft-expat-2.2.9, gensoft-giflib-5.2.1, gensoft-adm-python-2.7.17, gensoft-fontconfig-2.13.91, gensoft-libpng-1.6.37, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-taxoptimizer-2.0_1.0_amd64.deb
Size: 3849934
MD5sum: 1dc19007563cf6ac77ae6e5e389f0ddb
SHA1: dab5bf586abbeb9b1d436b8cd8ee6390cdd3eb92
SHA256: 678ab81802cc36256a184a88981568a2cb7ca3b37b3ea5913c234ce0b6175fbb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Taxonomy tools to analyse BLAST Hits.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tbb-2020.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6627
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tbb-2020.1_1.0_amd64.deb
Size: 2035506
MD5sum: 56d2a2df288513fa9d5dd773293dd49f
SHA1: c60cfc1d0f3abe53b858e55559b2738329f786c1
SHA256: 5e20c56f8ccaea1729f96fb5c08a2914b3efd63a240c8e217c1e7ab9a704110a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Intel(R) Threading Building Blocks (Intel(R) TBB) lets you easily write parallel C++ programs that take full advantage of multicore performance, that are portable, composable and have future-proof scalability.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tbb-2021.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 7218
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tbb-2021.5_1.0_amd64.deb
Size: 2355390
MD5sum: 18d453ea927b8c9e8924a6052c0dfe29
SHA1: 198939fbf1a7148e9d3a57de6fff3304363ac7c1
SHA256: bafc7b6b9fab1fa0815ec3e9f2189afe13be1859b062b09347b109a7bffaa6fa
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Intel(R) Threading Building Blocks (Intel(R) TBB) lets you easily write parallel C++ programs that take full advantage of multicore performance, that are portable, composable and have future-proof scalability.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tcellracer-0.6.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 418515
Depends: gensoft-graphviz-2.42.3, gensoft-kallisto-0.46.2, gensoft-trinityrnaseq-2.9.1, gensoft-adm-python-2.7.17, gensoft-salmon-1.1.0, libc6, gensoft-igblast-1.15.0, libgcc-s1, gensoft-bowtie2-2.3.5.1, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tcellracer-0.6.0_1.0_amd64.deb
Size: 106357194
MD5sum: 201827f30614a129d90c05b24d6cf205
SHA1: 6fdd9f82c9ffbaffda87803cc40234fc81b62337
SHA256: fb8d325067b6ecf38f0b1f8f9e91d90a48fafa7fa4717c897c666080d0b9c417
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This tool reconstructs the sequences of rearranged and expressed T cell receptor genes from single-cell RNA-seq data. It then uses the TCR sequences to identify cells that have the same receptor sequences and so derive from the same original clonally-expanded cell.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tcl-8.6.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 24686
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tcl-8.6.10_1.0_amd64.deb
Size: 5939316
MD5sum: 7dd8b6391faaef01f32d4e985f7d5c4c
SHA1: edea5434eb14fc13c4bcc759816278ef47c16216
SHA256: 6a66fc7277b391ac03f5f0ba469935d7335ca23195ac1bbfd1fd00f9f3836557
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tclap-1.2.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 6747
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tclap-1.2.5_1.0_amd64.deb
Size: 3890248
MD5sum: 15e0e770d101324456b694109644b7a3
SHA1: 2ea7758c0377de690ca657f9182aaa84c246b571
SHA256: c1c899c1841b2e194759c6b6aace76b2f10178cbb2286eb29ce15bf0d3704f4f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a small, flexible library that provides a simple interface for defining and accessing command line arguments.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tcoffee-12.00
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 26466
Depends: gensoft-tm-align-20170708, gensoft-expat-2.2.9, gensoft-probcons-1.12, gensoft-viennarna-2.4.14, gensoft-sap-1.1.3, gensoft-muscle-3.8.31, gensoft-amap-2.2, gensoft-fsa-1.15.9, gensoft-poa-v2, gensoft-adm-perl-5.30.1, libssl1.1, gensoft-mafft-7.453, gensoft-clustal-omega-1.2.4, gensoft-dialign-tx-1.0.2, gensoft-gcc-9.2.0, gensoft-pcma-2.0, gensoft-kalign-2.04, gensoft-mustang-3.2.3, zlib1g, gensoft-msaprobs-1.0.5, gensoft-proda-1.0, libc6, gensoft-msa-2.1, gensoft-hmmtop-2.1, gensoft-prank-170427, gensoft-dca-1.1, gensoft-clustalw-2.1, gensoft-probconsrna-1.12
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tcoffee-12.00_1.0_amd64.deb
Size: 13789230
MD5sum: 281f11aecab630ce8d7572b3d230763c
SHA1: 2a3f5a11e42aa003ef46a1703b94eb1d13495eba
SHA256: 514afde882ff3455dc0b99d3d9f1eca398df4f8a8a1bfeefe3c6bc119495c386
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: T-Coffee is a collection of tools for Computing, Evaluating and Manipulating Multiple Alignments of DNA, RNA, Protein Sequences and Structures.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-telseq-0.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1261
Depends: gensoft-gcc-9.2.0, zlib1g, gensoft-libbam-2.5.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-telseq-0.0.2_1.0_amd64.deb
Size: 305434
MD5sum: 3f8e2a4b620d0ac4575cbbf568cdef03
SHA1: b9e3e56ed541149a69795eff25e2e6d056608616
SHA256: 46fdb395b755cbf172fb1a5419f9e34386b6f00d8883ade2a1827aa893f6238f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: TelSeq is a software that estimates telomere length from whole genome sequencing data (BAMs).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-termcolor-2.0.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 31
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-termcolor-2.0.0_1.0_amd64.deb
Size: 6900
MD5sum: a8db45df2a0959aab2ffbe24cc2f636c
SHA1: 620ebf9bfb2aa12f35bcc4360006ba56004be650
SHA256: c6664ecad7ec167fe271c496a01c326917f98d634dca093149a8810ee2b4ac9e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Termcolor is a header-only C++ library for printing colored messages to the terminal.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tetranscripts-2.2.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 1432867
Depends: gensoft-adm-python-3.8.1, gensoft-libxml2-2.9.10, gensoft-libpng-1.6.37, libbz2-1.0, gensoft-libiconv-1.16, libssl1.1, gensoft-curl-7.68.0, libc6, zlib1g, gensoft-xz-5.2.5, gensoft-r-4.2.1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tetranscripts-2.2.3_1.0_amd64.deb
Size: 674759350
MD5sum: 2099c62575d1e6f3c14825a2b52f4f86
SHA1: cd69fed6973d1fc3fd6e7b14a1815c757c207cc3
SHA256: 69442d499e4a1c7faaf98692a58942f39bd3f0604ad97e630b8667859981b500
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A package for including transposable elements in differential enrichment analysis of sequencing datasets
License: unknown
Vendor: Institut Pasteur

Package: gensoft-texinfo-6.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14241
Depends: libc6, libtinfo5, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-texinfo-6.7_1.0_amd64.deb
Size: 3223722
MD5sum: 3f0795956a70b8916b9bd9b64aead4c6
SHA1: e598140da50377267822ce39841528e21502d80c
SHA256: 7f3cea8858f78929ce8c6d0017d53e664b5169d8bf6c7684897633f439b95153
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Texinfo is the official documentation format of the GNU project
License: unknown
Vendor: Institut Pasteur

Package: gensoft-texlive-2022
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5319959
Depends: gensoft-apptainer-1.1.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-texlive-2022_1.0_amd64.deb
Size: 5366934624
MD5sum: 11c865d4647b1cda3484e621714faf88
SHA1: 0db4e42638ec83137cbc02191da91e231413aa90
SHA256: 165b79c95fc7e79e715af36b9ee2f457822f72deee2a60b88e42c1ff70f4330e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: None
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tigris-0.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30716
Depends: gensoft-openmpi-4.0.5, gensoft-gcc-9.2.0, zlib1g, gensoft-fftw-3.3.8, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tigris-0.3_1.0_amd64.deb
Size: 13855900
MD5sum: a39979b9354962abf7cdf1409462aa1d
SHA1: 1ebe60124668f000ec4d9bf8ed202540a904215e
SHA256: 7e5c501bcadbbe20c26da56ef064fa9591d3e4a8399bdf746009ba176e16cd30
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an open source suite of classes and programs implemented in C++ for single particle electron microscopic image processing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tip-finder-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 293339
Depends: libstdc++6, gensoft-magicblast-1.5.0, gensoft-openmpi-4.0.5, gensoft-samtools-1.10, libc6, gensoft-bedtools-2.29.2, zlib1g, gensoft-bowtie2-2.3.5.1, gensoft-blast+-2.10.0, gensoft-adm-python-3.8.1, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tip-finder-1.0_1.0_amd64.deb
Size: 91898994
MD5sum: f676eeaf697251bc1bd59ea0b0454617
SHA1: 3e2f998b1ad8a7b26a4593d676e3224a4c9ccacc
SHA256: 7cfb65845de74a30d05ddf704521b3f1fa7e852cf5e738e644b942da947c7195
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transposable element Insertion Polymorphism Finder for huge genomic datasets
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tipdate-1.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 277
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tipdate-1.2_1.0_amd64.deb
Size: 132114
MD5sum: 799a769d19acab6e51bb26a8f2e28182
SHA1: 3d9958b9e78ec35ff112f29c70a38ac2e4b13574
SHA256: 7ea5ded83b06f9e37518e953d9aebb58de05138eda652cb72db60e1b5035f0c2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program to estimate the rate of molecular evolution and time-scale of a phylogeny from dated sequences
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tk-8.6.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 8762
Depends: libc6, zlib1g, gensoft-xorg-libs-1.1, libbz2-1.0, gensoft-tcl-8.6.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tk-8.6.10_1.0_amd64.deb
Size: 1636122
MD5sum: a163aeb8298e14bc17a7bb4ffc9e62ce
SHA1: 87193610b5b770b79b8d36c549a94e6358b4f75f
SHA256: 128dbef054d0cae0a14ffaaf622b1abc74407066e355ae79f90a5e0ccd23c7f5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tk is a graphical user interface toolkit that takes developing desktop applications to a higher level than conventional approaches.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tm-align-20170708
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 436
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tm-align-20170708_1.0_amd64.deb
Size: 51006
MD5sum: 5b00efc11546b42a0e7ca7d4e5af89a2
SHA1: ab25aaff5fc1b3d137f6eaec928440974f53eada
SHA256: feaf3203f8457e752031386c05aeb3ac509cec5cbbeb76c7b787e3856e0ac91b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: TM-align is an algorithm for sequence independent protein structure comparisons. For two protein structures of unknown equivalence
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tnt-1.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3689
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tnt-1.5_1.0_amd64.deb
Size: 1785880
MD5sum: 15a2880a0c6a41ca5960aa0ab875d1f8
SHA1: ca6e28010b417cb2a4639056a2fe6bc9908f4cdb
SHA256: c0d90a419b05510648d9eb25f8c83afd4b0486168b04b01c94fc31ed922c6b8b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: TNT stands for (Tree analysis using New Technology). It is a program for phylogenetic analysis under parsimony (with very fast tree-searching algorithms as well as extensive tree handling and diagnosis capabilities
License: unknown
Vendor: Institut Pasteur

Package: gensoft-topaz-0.2.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 5185847
Depends: gensoft-singularity-3.8.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-topaz-0.2.4_1.0_amd64.deb
Size: 5296155072
MD5sum: 52a0a6fdfcc61585bfa70e16972b3960
SHA1: 8d12ef6b5696bee7be1b0b2939f9da471951275e
SHA256: 40118f4a4c2e9ab5c114e943479fc66e3eb3e17a43f61a67b92cee0c9c2a5bd6
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tophat-2.1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 64533
Depends: gensoft-samtools-0.1.19, gensoft-boost-1.72.0, gensoft-adm-python-2.7.17, libc6, zlib1g, gensoft-bowtie2-2.1.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tophat-2.1.1_1.0_amd64.deb
Size: 18321430
MD5sum: 2d0a60f8ac13ba29bb77855e47ba4e7f
SHA1: 1eae16dadd1ed7590400e857ef5ede82bac3caf0
SHA256: 5b05612bc55fe2e13a3674b8ef8a25107b90a67cf9217a0228bdd7b32711c3a8
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Fast splice junction mapper for RNA-Seq reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-toppred-1.10
Version: 2.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 220
Depends: zlib1g, gensoft-expat-2.4.1, libbz2-1.0, libc6, gensoft-fontconfig-2.13.91, gensoft-libgd-gd-2.2.5, gensoft-freetype-2.10.1, gensoft-libjpeg-turbo-2.0.4, gensoft-xz-5.2.4, gensoft-gnuplot-5.2.8, gensoft-xorg-libs-1.1, gensoft-libpng-1.6.37, gensoft-libtiff-4.1.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-toppred-1.10_2.0_amd64.deb
Size: 80376
MD5sum: c71840b97d3c7c639e094db989bf9140
SHA1: 2d46f34271b24a38d7f4b9836bba4221da2cf299
SHA256: 1be5d186db8e9aba557b70050d9aa8804be268f0a6c685c291f41c1d84ade0a5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tpot-0.11.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 229084
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tpot-0.11.1_1.0_amd64.deb
Size: 74848804
MD5sum: 54633cd757e075df8e40e5a93b045c0f
SHA1: 4031779551cf0b70a5ada7fcac53df04669386aa
SHA256: 4b5b1f05932dac03e370c4f0281ec7c67795453a2fd9760ed5cd3362497ecf62
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a Python tool that automatically creates and optimizes machine learning pipelines using genetic programming.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tracer-v1.7.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6350
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tracer-v1.7.1_1.0_amd64.deb
Size: 5944354
MD5sum: 053ced5a59153e5915d158215523819c
SHA1: fc3e319570249f7b64e285dd7465fab5a7b41023
SHA256: f72b0d28d14c927d8197202dd133dfc0d7db24c8a1dd33c80f98c7ffd512c813
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tracer a program for analysing the trace files generated by Bayesian MCMC runs. It can be used to analyse runs of BEAST, MrBayes, LAMARC and possibly other MCMC programs.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-traitar-1.1.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 262883
Depends: gensoft-hmmer-3.3, gensoft-adm-python-2.7.17, gensoft-prodigal-2.6.3.pp1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-traitar-1.1.1_2.0_amd64.deb
Size: 87431404
MD5sum: 2bec7e2d4224a09a8af4cd43ad46bfe9
SHA1: 684a37f1348f748d3007debc17c598319349b82d
SHA256: 39ecbe8bfd21f4255f433051880bbc38b285ab34f772c6962bb87f2c4c6edf3e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Traitar is a software for characterizing microbial samples from nucleotide or protein sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-transabyss-2.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 19259
Depends: libstdc++6, libc6, gensoft-abyss-2.2.4, gensoft-blat-36, libgcc-s1, gensoft-adm-python-2.7.17
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-transabyss-2.0.1_1.0_amd64.deb
Size: 6308940
MD5sum: 18e08a68549b8ebfcaa50b8e5c8c4e9e
SHA1: 8a7242ca5f31662260bcd57a3649be734ba6c2fd
SHA256: 85a0f281b94b3943266ec4ad4b90290660210e76d6d30a2b23ac15fb740a3387
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: de novo assembly of RNAseq data using ABySS
License: unknown
Vendor: Institut Pasteur

Package: gensoft-transdecoder-5.5.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 112111
Depends: libc6, zlib1g, gensoft-expat-2.4.1, gensoft-freetype-2.10.1, libbz2-1.0, gensoft-fontconfig-2.13.91, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1, gensoft-hmmer-3.2.1, gensoft-libpng-1.6.37, gensoft-r-4.2.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-transdecoder-5.5.0_1.0_amd64.deb
Size: 54287822
MD5sum: 6a0dd9e3cdc43cd3470a6d6274a541c4
SHA1: 5644f3a09b1ba1aa0b04562d44f3bfb8d3a8f1d7
SHA256: 78b8cee6457aaac714328071b0b00061e6352cafd3effd376c5d63693a1087af
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trax-1.0.0-beta
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1313441
Depends: gensoft-gcc-9.2.0, gensoft-infernal-1.1.4, zlib1g, gensoft-libiconv-1.16, gensoft-ucsc-tools-v390, gensoft-bowtie2-2.3.5.1, gensoft-adm-python-2.7.17, gensoft-samtools-1.10, libbz2-1.0, libssl1.1, gensoft-r-4.1.0, gensoft-curl-7.68.0, gensoft-sra-sdk-2.10.2, gensoft-bedtools-2.29.2, gensoft-libxml2-2.9.10, gensoft-seqprep-1.3.2, gensoft-libpng-1.6.37, gensoft-xz-5.2.5, libc6, gensoft-cutadapt-1.18
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trax-1.0.0-beta_1.0_amd64.deb
Size: 754506546
MD5sum: f7a2ba345584b18cc7ba3e5a93dab839
SHA1: 1cdfea9c5194f794304a1a0435a15d97a7e874ba
SHA256: 1a90cb8c7f32979f15bbb9b6fb4b9f67941a3fc07feca845e8ca983aa03feb97
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tRNA Analysis of eXpression (tRAX) is a software package built for in-depth analyses of tRNA-derived small RNAs (tDRs), mature tRNAs, and inference of RNA modifications from high-throughput small RNA sequencing data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tre-0.8.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 378
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tre-0.8.0_1.0_amd64.deb
Size: 141208
MD5sum: 79b242a37331521db421eca3d49cb8f4
SHA1: ec7eaa07002e50ec279e59c1b73dd7a3143151e3
SHA256: 3650c3624ec58bc27b79823b423114aec03e657362e3ad40a135570bc8e36c0a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a lightweight, robust, and efficient POSIX compliant regexp matching library with some exciting features such as approximate (fuzzy) matching.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-tree-puzzle-5.2
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 2541
Depends: libc6, gensoft-openmpi-4.0.5, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-tree-puzzle-5.2_1.0_amd64.deb
Size: 1268240
MD5sum: 123626b99107587c7200470cf443faff
SHA1: 0af37cbcdf1590100848772c2c10f0c0b77d9e19
SHA256: 90b159e83c86031e3f32f76a19d7ad9705f04793f34386c2907d4ceab6f4685c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-treecluster-1.0.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 11689
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-treecluster-1.0.3_1.0_amd64.deb
Size: 3682890
MD5sum: a4a6f245d48020cfb205eb49aeb31c13
SHA1: 4f8dd53111b49c4785e1af63f41adf259e004202
SHA256: 16a0130f0ca57a2ea2b93caf4ec35526d7c6e102acc35a3b2b4f244787dca689
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: TreeCluster is a tool that, given a tree T (Newick format) and a distance threshold t, finds the minimum number of clusters of the leaves of T such that some user-specified constraint is met in each cluster.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-treemix-1.13
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 57886
Depends: zlib1g, gensoft-gcc-9.2.0, libc6, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-treemix-1.13_1.0_amd64.deb
Size: 14422024
MD5sum: 486ff55b6d77f61c7ea61dedef4021bd
SHA1: f3fe75c650834f0b563f763e1013dcf760d09e87
SHA256: 6cd96dfc799591a51d38f000c673bc9d6fb045898f52ba707511296ea4b16e19
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a method for inferring the patterns of population splits and mixtures in the history of a set of populations
License: unknown
Vendor: Institut Pasteur

Package: gensoft-treetime-0.7.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 239872
Depends: gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-treetime-0.7.4_1.0_amd64.deb
Size: 81811140
MD5sum: 1336677e441d7974c700a7e7c3f99ac1
SHA1: baf373aa864c503a28988d23f0f01eb1a847c4a7
SHA256: 225735789bb42c21dd4ba2b070e4fdc579d136d55a5646e101b7d13d021ffc0e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: TreeTime provides routines for ancestral sequence reconstruction and the inference of molecular-clock phylogenies, i.e., a tree where all branches are scaled such that the locations of terminal nodes correspond to their sampling times and internal nodes are placed at the most likely time of divergence.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-treetime-0.8.6
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 296990
Depends: zlib1g, libstdc++6, gensoft-adm-python-3.8.1, libc6, libgcc-s1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-treetime-0.8.6_1.0_amd64.deb
Size: 92473902
MD5sum: bed76433c981bbcae2f4f39261df331c
SHA1: 433b3240ff3fc5fa940480ab86848303a401e72c
SHA256: 976fc7949d733d0eda59efe566a5d316321af316386deeca5f5690b623d65df5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: TreeTime provides routines for ancestral sequence reconstruction and the inference of molecular-clock phylogenies, i.e., a tree where all branches are scaled such that the locations of terminal nodes correspond to their sampling times and internal nodes are placed at the most likely time of divergence.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trf-4.09
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 114
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trf-4.09_1.0_amd64.deb
Size: 48542
MD5sum: e4ebfaddcb20b7b47f4d793ca1a1f593
SHA1: 41325d46e82c00dd72b82ada7bf0f72513e47149
SHA256: d70801fadff066ad2c8954ae3ef2e73991e0715a13d20b4193eb80e1c85ea71f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tandem Repeats Finder is a program to locate and display tandem repeats in DNA sequences.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trimal-1.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 682
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trimal-1.4.1_1.0_amd64.deb
Size: 271480
MD5sum: d8742949678282093c5f65545aaa4b25
SHA1: 5e818acd2018d6c5ed86de3658ab24a60f504062
SHA256: 25565f533194888f8e72b86e68cbc5e0a7ecf85098a2be4e44579a9f04f50e94
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A tool for automated alignment trimming in large-scale phylogenetic analyses
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trimgalore-0.6.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 677
Depends: gensoft-cutadapt-2.10, gensoft-adm-perl-5.30.1, gensoft-fastqc-0.11.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trimgalore-0.6.6_1.0_amd64.deb
Size: 348432
MD5sum: 3c09a02013a998cb9aa19a8d3aa25781
SHA1: 0773bd381b3dfe45202e4017fb14c62c5f9d362a
SHA256: 20ca811b267dbf53b9c3167e892b2fbfcc86bd02f5c372b5c03b187dec3cb3db
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trimgalore-0.6.7
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 677
Depends: gensoft-adm-perl-5.30.1, gensoft-fastqc-0.11.9, gensoft-cutadapt-2.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trimgalore-0.6.7_1.0_amd64.deb
Size: 348520
MD5sum: f1e5c25ccdec0be38b475d6986726bf5
SHA1: 213a19ea997eddc55fa79258c25fca55272c2904
SHA256: 65363306b07074e6aaf1bf0ebdcf2168f2de0d31d5ec3b26fc85b411087c0555
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trimmomatic-0.39
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 459
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trimmomatic-0.39_1.0_amd64.deb
Size: 419280
MD5sum: c05e5d960e851583218e088b1f2e9aa5
SHA1: b4ef13ca57d86f3ce730933ac66790c3cbab9198
SHA256: 91a4ba23dbe023bdfe4ff8a3f691a7405059b2b496c3a05eea6a2388ac67105b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A flexible read trimming tool for Illumina NGS data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trinityrnaseq-2.9.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 90934
Depends: gensoft-salmon-1.1.0, zlib1g, gensoft-adm-python-2.7.17, libc6, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, gensoft-jellyfish-2.3.0, gensoft-graalvm-ce-java8-20.0.0, gensoft-samtools-1.10, gensoft-bowtie2-2.3.5.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trinityrnaseq-2.9.1_1.0_amd64.deb
Size: 26777420
MD5sum: bee395ac7b1c074ed550300578196cd0
SHA1: dc9c5f0b10da0842f9add049cb081be532456ef6
SHA256: 040f2a85db2915d8b6a5fde95ed88d608d370aaad317b031293a5b657dbcdc6f
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a novel method for the efficient and robust de novo reconstruction of transcriptomes from Illumina RNA-seq data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trnascan-1.3.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1893
Depends: libc6, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trnascan-1.3.1_1.0_amd64.deb
Size: 562104
MD5sum: 67476d34cd2bbb4a6dd873de75b704e8
SHA1: 6c37f17c24fc586eff3a924e715e57bfb83c0d4d
SHA256: 411785246dccd27a999d0ac96b67534050a0ea24cb91b3ce17b8f67bdd4bd116
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tRNA detection in large-scale genome sequence
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trnascan-se-2.0.7
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 18616
Depends: gensoft-adm-perl-5.30.1, gensoft-infernal-1.1.3, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trnascan-se-2.0.7_1.0_amd64.deb
Size: 4353322
MD5sum: 6c190d3270855dade7c46046a94ff779
SHA1: da03c73906dc6d26562cc63bafefae7dac94e5ca
SHA256: d5a0a8f1bf2b387fef73a9ef4f1b8481da4ec9ac26c8653b1dc5b5019c4293b2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An improved tool for transfer RNA detection
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trnascan-se-2.0.9
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 18624
Depends: libc6, gensoft-adm-perl-5.30.1, gensoft-infernal-1.1.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trnascan-se-2.0.9_1.0_amd64.deb
Size: 4354154
MD5sum: cab2a7f03e5ea694382f3983e7cc2aab
SHA1: f7656965f6a33226f466035a96b6f47fef1838f1
SHA256: 1da509987ab576e04388c749e0ef9eb56dbcb939ab256d7af6ccac7abd23e8cc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An improved tool for transfer RNA detection
License: unknown
Vendor: Institut Pasteur

Package: gensoft-trycycler-0.5.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 189131
Depends: libstdc++6, gensoft-minimap2-2.17, gensoft-miniasm-0.3, gensoft-r-4.1.0, gensoft-muscle-3.8.1551, libc6, gensoft-adm-python-3.8.1, libgcc-s1, gensoft-mash-2.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-trycycler-0.5.0_1.0_amd64.deb
Size: 60535220
MD5sum: 31f98778512eb40d9c669f7bf53a436d
SHA1: ba15daca3eca8359b9d03c8ac92e4212d4f3f8ba
SHA256: 41a75920906fbf74b0b8dfc8654bfe841499637d1853050e93912b5584483e8d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A tool for generating consensus long-read assemblies for bacterial genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ttmath-0.9.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 479
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ttmath-0.9.3_1.0_amd64.deb
Size: 106124
MD5sum: f7550f6b65264541bf7839ccd7cb41b6
SHA1: ecb503cf0397a1b42f232ceab4ad0acfb2110f27
SHA256: f253a2a4d0288ce6e2fb450ae27337b0b6b296db6775972a53920d195db70567
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: TTMath is a small library which allows one to perform arithmetic operations with big unsigned integer, big signed integer and big floating point numbers. It provides standard mathematical operations like adding, subtracting, multiplying, dividing. With the library also goes a mathematical parser to help you solving mathematical expressions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-twl-ninja-0.95-cluster-only
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 185
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-twl-ninja-0.95-cluster-only_1.0_amd64.deb
Size: 86176
MD5sum: 77488779606e5b1cbeb0b74762e6419d
SHA1: 5373b021c7548bb6c3e5dfdecb5bd97100f6baf9
SHA256: 3ac221b09c9ba458faa2f979320901ef9d2f9097cd5e1c2022a3e33130850b91
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Nearly Infinite Neighbor Joining Application
License: unknown
Vendor: Institut Pasteur

Package: gensoft-twl-ninja-0.97-cluster-only
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 185
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-twl-ninja-0.97-cluster-only_1.0_amd64.deb
Size: 86232
MD5sum: db688a8c6041a6aebe8035486715be47
SHA1: 084417181867295c50a68aa68255f09ff8abc36c
SHA256: b856044c2ce512c3246e454a53312b4e0476016e5c9e8f3547bc1875e53c68b0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Nearly Infinite Neighbor Joining Application
License: unknown
Vendor: Institut Pasteur

Package: gensoft-twopaco-0.9.4
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1784
Depends: gensoft-tbb-2020.1, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-twopaco-0.9.4_1.0_amd64.deb
Size: 538544
MD5sum: b057bbf5e362f0857d98e18368cc3109
SHA1: 69fa99513c1b607bcd550de43dcea1db4fa3ffcc
SHA256: 0e1f07199d078e3cb1fec76ab77a370226d0685400cd37dedbcf714c30a50824
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A fast constructor of the compressed de Bruijn graph from many genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ubin-0.9.14
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1090710
Depends: gensoft-singularity-3.6.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ubin-0.9.14_1.0_amd64.deb
Size: 1110492838
MD5sum: 73b1d2bd070bf03d3f612bd1dea36557
SHA1: 91b767fa13cb17853d49d54e0dbfacf66ba0ffb6
SHA256: 63dfb7ff77e86d01025a2ecfbf5c301ec771f55e3ae3b815fac1250fcd083da2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Software for manual curation of genomes from metagenomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ucsc-tools-v390
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1363718
Depends: gensoft-adm-python-2.7.17, gensoft-adm-perl-5.30.1, gensoft-libpng-1.6.37, libc6, libssl1.1, gensoft-mysql-client-8.0.19, gensoft-gcc-9.2.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ucsc-tools-v390_1.0_amd64.deb
Size: 495526868
MD5sum: 97441ed38e7290b2d5aefa4e13811d91
SHA1: bd1e309672fc2de5a16c4e4f6d932cb7f21e9e3e
SHA256: 0f486d0b22108614f690b336b13dcb4fc547830b9f326b5267d1c61de9aa12e5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tools and utilities created by the UCSC Genome Browser Group
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ucx-1.9.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 49303
Depends: gensoft-gcc-9.2.0, libnuma1, librdmacm1, gensoft-ucx-1.9.0, libgcc-s1, libnl-route-3-200, libibverbs1, libnl-3-200, libc6, ibverbs-providers
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ucx-1.9.0_1.0_amd64.deb
Size: 13767980
MD5sum: d491acd5c94375468b014d0f20041535
SHA1: 7e0c80b984d545c13a59da65218240e4131096c5
SHA256: 9a97647f20d17c821e5d7b2569f3477361f7fbab83c90e3204689c4c23df3aee
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Unified Communication X (UCX) provides an optimized communication layer for Message Passing (MPI), PGAS/OpenSHMEM libraries and RPC/data-centric applications.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-udunits-2.2.26
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 855
Depends: gensoft-expat-2.2.9, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-udunits-2.2.26_1.0_amd64.deb
Size: 222194
MD5sum: 5a87e9010d98999280e6e3ad7bd12899
SHA1: bf9a518abd88c2812af48a49840eba601a93c5b5
SHA256: 7736bb29686c7e71e1666accb25c3ba17e0030379b034441c4826f9e340f6e7a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: UDUNITS package supports units of physical quantities. Its C library provides for arithmetic manipulation of units and for conversion of numeric values between compatible units.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-ultraplex-1.2.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 22641
Depends: gensoft-adm-python-3.8.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-ultraplex-1.2.5_1.0_amd64.deb
Size: 7003116
MD5sum: 48ac19bb8606dededcdaf38f0dcf35e0
SHA1: 9bb6c94396d7d14451171ae02de8c20879b913bb
SHA256: 08c05b7b99f2dc79528153a0200a36f3b50b90540181d5325ef1d560a007e721
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an all-in-one software package for processing and demultiplexing fastq files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-umi-tools-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 272608
Depends: libbz2-1.0, zlib1g, gensoft-adm-python-3.8.1, libssl1.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-umi-tools-1.0.1_1.0_amd64.deb
Size: 85127154
MD5sum: a272d033c59814ed2d4d8fe9278568f7
SHA1: 371a8b729535cd3d43a92af8f301413b8b5e59cd
SHA256: 4e413f771bc17d56552d03053326b447b7340ff8e01e88447ac0edf6d8875beb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tools for handling Unique Molecular Identifiers in NGS data sets
License: unknown
Vendor: Institut Pasteur

Package: gensoft-umi-tools-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 272748
Depends: libbz2-1.0, libssl1.1, gensoft-adm-python-3.8.1, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-umi-tools-1.1.0_1.0_amd64.deb
Size: 85173110
MD5sum: f312b8f1773a273383caefbf19f2f012
SHA1: 057b7eaaadee06a7522eefb75e12a144dc2ba90d
SHA256: 896e3b6b3384f53e12cfbff967a310ef6ada53112b982be0b58804d83c329f61
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Tools for handling Unique Molecular Identifiers in NGS data sets
License: unknown
Vendor: Institut Pasteur

Package: gensoft-unicycler-0.4.8
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12901
Depends: gensoft-racon-1.4.3, gensoft-gcc-9.2.0, libc6, gensoft-samtools-1.10, gensoft-blast+-2.10.0, gensoft-pilon-1.23, gensoft-adm-python-3.8.1, gensoft-bowtie2-2.3.5.1, gensoft-spades-3.14.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-unicycler-0.4.8_1.0_amd64.deb
Size: 4089936
MD5sum: 909f670bbae86b100ea6017088aced02
SHA1: 8d8e5b6f3d731ec5bc194258aa8561b1669e1957
SHA256: 1d00148bfeba473678b3bd44a6a93339653989c407f757067b097ed0465ad6cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Unicycler is an assembly pipeline for bacterial genomes. It can assemble Illumina-only read sets where it functions as a SPAdes-optimiser. It can also assembly long-read-only sets (PacBio or Nanopore) where it runs a miniasm+Racon pipeline. For the best possible assemblies, give it both Illumina reads and long reads, and it will conduct a hybrid assembly.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-unitig-counter-1.1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10035
Depends: gensoft-boost-1.72.0, gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-unitig-counter-1.1.0_1.0_amd64.deb
Size: 3671556
MD5sum: 81e32b0cb932068a4ea5d89cf3d9a37b
SHA1: 4a28c6a47c026bc8c4baada4eb076d8e16e06788
SHA256: ed45a52ae439463612731f565841513748be3638055cb14a7faadb4f49873bc7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Uses a compressed de Bruijn graph to count unitigs in bacterial populations. This is a slightly modified version of the unitig and graph steps in DBGWAS software, repurposed for input into pyseer
License: unknown
Vendor: Institut Pasteur

Package: gensoft-unrar-6.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 300
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-unrar-6.0.2_1.0_amd64.deb
Size: 145970
MD5sum: 41ed3f71a01f9b6e871a857afce4ccc8
SHA1: 8c8291a288d3c2650611f274303d1737ee69fc60
SHA256: 30b738990b7bf1a6af87387a8e41ce9d90f965de5ac6d6935cb283035c0c30fc
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The UnRar package contains a RAR extraction utility used for extracting files from RAR archives
License: unknown
Vendor: Institut Pasteur

Package: gensoft-valgrind-3.18.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 270703
Depends: libc6, gensoft-openmpi-4.0.5, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-valgrind-3.18.1_1.0_amd64.deb
Size: 75145300
MD5sum: 54ff1ac4c0a74ef1c78940af28f76418
SHA1: 02b3aedbffabdd983bd86b51d288dfdd0bc816af
SHA256: f7e2337161d14fb92428b18bcb212c6ccf400ab96fdfe28cfadd7ef8e7326353
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: an instrumentation framework for building dynamic analysis tools
License: unknown
Vendor: Institut Pasteur

Package: gensoft-varscan-2.4.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 114
Depends: gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-varscan-2.4.2_1.0_amd64.deb
Size: 116530
MD5sum: f0ac08b8477db5df36d9bbb75eb6b000
SHA1: c642f895b7cf85314a102d9a142f2024dd47bdec
SHA256: d9a9ac7e1feac609bd9d03bcc5b3c7fd034079dce5372a2097e60cebfd66d510
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tool for identifying SNPs and indels in massively parallel sequencing of individual and pooled samples
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vawk-0.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13
Depends: gensoft-adm-python-2.7.17, mawk
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vawk-0.0.1_1.0_amd64.deb
Size: 6130
MD5sum: 890c7cb9ec976540de1ba041234b34d3
SHA1: a152445e58220d2ae9e5e46db1d3c70a6ad5d49d
SHA256: 021162a850d130de6c4dc6e19201965f29c91b3140045a4a3f3d1ce5810b0737
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An awk-like VCF parser
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vcf2mst-a5d5c9d
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 24
Depends: gensoft-grapetree-2.1, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vcf2mst-a5d5c9d_1.0_amd64.deb
Size: 8438
MD5sum: 4e1a08920008e348a73c066eb74495aa
SHA1: f76debe242fd33db5570526187edecddf492a174
SHA256: 3dcd881c012e6d07117cdb8ff9b2156359b9f94e47d0733d3e073ee60df0b432
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Hamming Distance based Minimum Spanning Tree from Samples vcf using graptree
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vcflib-1.0.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 240282
Depends: gensoft-htslib-1.10, gensoft-xz-5.2.4, gensoft-adm-python-3.8.1, zlib1g, libc6, libbz2-1.0, gensoft-gcc-9.2.0, gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vcflib-1.0.1_1.0_amd64.deb
Size: 85829580
MD5sum: 182d1fa3068a4ee1d8cd747184f53d70
SHA1: f940188e94496c663b77a9fe5dcc78acb358ef85
SHA256: a9d5eb67de7efdc06702e2be16c2832d8b71d7206bf9bb07c43c6412c22c9883
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a C++ library for parsing and manipulating VCF files.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vcftools-0.1.16
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 27061
Depends: zlib1g, gensoft-adm-perl-5.30.1, gensoft-gcc-9.2.0, libc6, gensoft-tabix-0.2.6, gensoft-zlib-1.2.11
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vcftools-0.1.16_1.0_amd64.deb
Size: 6762182
MD5sum: 6dac46b0398102d11c416c68bdf0ef00
SHA1: 1223d8afe0ed991e01c1ccb21eb868c9235b2cbe
SHA256: 607ce0e13b9a74c3644d7a3c59432f3f5845eaaf497a2e0548b3da9d02d193e3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A program package designed for working with VCF files
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vcontact2-0.9.19
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 502602
Depends: gensoft-mcl-14-137, gensoft-diamond-2.0.6, gensoft-blast+-2.10.1, gensoft-adm-python-3.8.1, gensoft-clusterone-1.2
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vcontact2-0.9.19_1.0_amd64.deb
Size: 263389176
MD5sum: 05ab62ae059adc192117a1e7816ac178
SHA1: 0ce6554d6c55fd14bbebd2747558f241877658ef
SHA256: 32c6143a00d25334b8212455294801e893ae46e52231606e674f9c9022acece1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool to perform guilt-by-contig-association classification of viral genomic sequence data. It is designed to cluster and provide taxonomic context of viral metagenomic sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-velvet-1.2.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2445
Depends: libc6, zlib1g, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-velvet-1.2.10_1.0_amd64.deb
Size: 1405520
MD5sum: 65a469d23b3a28b43e5cc0674bee5754
SHA1: 5f19af2e96a91a1ec60039b19631b44104da323c
SHA256: 9b7bf30696639770320b73483a10ac5b12e3e02f2c02a3e14f3c7d5c129ab10e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Sequence assembler for very short reads
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vg-1.37.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 39240
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vg-1.37.0_1.0_amd64.deb
Size: 15003802
MD5sum: c14571a04322a9f236ae912f65299598
SHA1: e6c3ab249d4b380e14b69f909217d0105b24bf8d
SHA256: 79d0b1628f522045092914a76e2dad6df47031512536dfc51a5335ac8a89939c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tools for working with genome variation graphs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vg-1.46.0
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 44122
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vg-1.46.0_1.0_amd64.deb
Size: 16673064
MD5sum: 24aa11c8f4c9500b48edf1e6fa2da3a6
SHA1: 5a4043b5c51c279016f7d6fe6b870bf9a3e087db
SHA256: 43c26025fe3a3d4b5da2e0789dfec8170b4c8f97c90e913955695907ba568658
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: tools for working with genome variation graphs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vibrant-1.2.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 11124487
Depends: gensoft-hmmer-3.3, gensoft-prodigal-2.6.3.pp1, libstdc++6, libc6, libgomp1, libgcc-s1, gensoft-adm-python-3.8.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vibrant-1.2.1_2.0_amd64.deb
Size: 3613163840
MD5sum: 8c90e3a305ac563b225fb999b3c6ff18
SHA1: 6b409bdfff37a0e1d543dbca30d793f5db5944e3
SHA256: c9fd1f6e2b5e35f8e08522e11e7f54af6f221a4ae5d3bffeabe919a08d13da74
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for automated recovery and annotation of bacterial and archaeal viruses, determination of genome completeness, and characterization of viral community function from metagenomic assemblies. VIBRANT uses neural networks of protein annotation signatures and genomic features to maximize identification of highly diverse partial or complete viral genomes as well as excise integrated proviruses.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-viennarna-2.4.14
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 244869
Depends: gensoft-adm-perl-5.30.1, libc6, gensoft-gsl-2.6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-viennarna-2.4.14_1.0_amd64.deb
Size: 62689602
MD5sum: e9f5eb643ea4438fca0cbe78a8042d0e
SHA1: b65a99972b17b1ced8d9f745df780efafbfcf957
SHA256: 8e6c797e49429a277d62ea909f7b4ee2a1456a7f77918055d7faab866ed4c3c2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: RNA Secondary Structure Prediction and Comparison
License: unknown
Vendor: Institut Pasteur

Package: gensoft-viptreegen-1.1.3
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 59086
Depends: gensoft-blast+-2.13.0, gensoft-libiconv-1.16, gensoft-gmp-6.2.0, gensoft-libxml2-2.9.10, gensoft-gcc-9.2.0, gensoft-r-4.2.1, gensoft-parallel-20200222, zlib1g, gensoft-ruby-2.7.0, libc6, gensoft-xz-5.2.5
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-viptreegen-1.1.3_1.0_amd64.deb
Size: 23524090
MD5sum: 2151151cd323583b6f65243bc1edfcff
SHA1: 276d57b9d1229cb3fb4b933f3a70c8fc97ad493d
SHA256: cdcb366e4ec6b6098d8164e766a9fda64b85e2e1220c560ceec862876fec61a3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a command line tool for viral proteomic tree generation
License: unknown
Vendor: Institut Pasteur

Package: gensoft-viralcomplete-db9ffa7
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 199061
Depends: zlib1g, libc6, gensoft-adm-python-3.8.1, libgcc-s1, gensoft-blast+-2.13.0, gensoft-prodigal-2.6.3.pp1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-viralcomplete-db9ffa7_1.0_amd64.deb
Size: 66497158
MD5sum: 6ebcd520c98f6f065289e9c3a9d9e121
SHA1: c36139d06ab9a30bad02a9c29bb8c728cb3fe88c
SHA256: e9bb416a9221ee771a49dd5d22b70ff271ca9495dc7a6e815ead1779cf8ec49d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: viralComplete is intended for completeness verification of novel viral contigs
License: unknown
Vendor: Institut Pasteur

Package: gensoft-viralverify-1.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 764537
Depends: gensoft-hmmer-3.3.2, libgcc-s1, gensoft-prodigal-2.6.3.pp1, libc6, zlib1g, gensoft-adm-python-3.8.1, gensoft-blast+-2.13.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-viralverify-1.1_1.0_amd64.deb
Size: 160426816
MD5sum: 635ca0095ecc2ce409c70e82bb286129
SHA1: 7be5bc3539d4f0dbead22962e630e4a2212fd64a
SHA256: e9998d32c620e6c87ff4a2e68d97953ef5f77e8e94b568e08320a251fcbac179
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: viralVerify classifies contigs (output of metaviralSPAdes or other assemblers) as viral, non-viral or uncertain, based on gene content. Also for non-viral contigs it can optionally provide plasmid/non-plasmid classification.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-viridic-1.1
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 470324
Depends: gensoft-apptainer-1.1.9
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-viridic-1.1_1.0_amd64.deb
Size: 477223850
MD5sum: 7e464ad6c691763ac066ff5e65877b0d
SHA1: 89a95f644bd14e4e76591ec8ef42d82c5021ef58
SHA256: b2d55922ded1dc370e1fd5ba149109fc1aeed9341816ab00e21572962f72d466
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: VIRIDIC (Virus Intergenomic Distance Calculator) computes pairwise intergenomic distances/similarities amongst viral genomes.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-viromeqc-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 173163
Depends: gensoft-diamond-0.9.30, gensoft-bowtie2-2.3.5.1, gensoft-adm-python-3.8.1, libc6, gensoft-samtools-1.10
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-viromeqc-1.0_1.0_amd64.deb
Size: 51481918
MD5sum: 2085ca21014ef555ef17ad630acb3674
SHA1: b745738380cb10061c974e3943c74be160af5fa4
SHA256: 9650413cf8980ca59c6b1c36bd8e6e131f21e44d56e4b7145ec9b9ce25b1786a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichment score for each virome. The score is calculated with respect to the expected prokaryotic markers abundances in reference metagenomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-virsorter-1.0.6
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 12883810
Depends: gensoft-diamond-0.9.30, gensoft-libxml2-2.9.10, gensoft-libiconv-1.16, gensoft-adm-perl-5.30.1, gensoft-expat-2.2.9, gensoft-xz-5.2.4, gensoft-hmmer-3.3, gensoft-mcl-14-137, gensoft-muscle-3.8.1551, gensoft-blast+-2.10.0, libc6, gensoft-metageneannotator-2008-8-19
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-virsorter-1.0.6_1.0_amd64.deb
Size: 4184049792
MD5sum: 357ae24cf63a6e0b6c6a885a5c02c5ca
SHA1: 2275dff8e39a18bbb3c9d3b7641f6e7727a0d4fc
SHA256: b8834bae0eabe90017b59f01d3123cfeb6c6dc874cc3c31a83e3461ca6bad47e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: mining viral signal from microbial genomic data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-virsorter-2.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 93733
Depends: gensoft-xz-5.2.4, gensoft-libiconv-1.16, gensoft-diamond-0.9.30, gensoft-blast+-2.10.0, libgcc-s1, gensoft-libxml2-2.9.10, gensoft-adm-perl-5.30.1, gensoft-metageneannotator-2008-8-19, libstdc++6, gensoft-mcl-14-137, gensoft-adm-python-3.8.1, libc6, gensoft-expat-2.2.9, gensoft-muscle-3.8.1551, gensoft-hmmer-3.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-virsorter-2.2.2_1.0_amd64.deb
Size: 51842110
MD5sum: 28543488ced94b46846f45e201d3025f
SHA1: 4eb327a38d614ad07770377fe3779768e905574d
SHA256: bf741d754760398abc69db50c718fd241b48cefaa3113f465f0c505db9eb8ea5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: mining viral signal from microbial genomic data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-virsorter-2.2.3
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 337360
Depends: gensoft-hmmer-3.3.2, gensoft-prodigal-2.6.3.pp1, gensoft-diamond-2.0.14, gensoft-mcl-14-137, gensoft-adm-python-3.8.1, gensoft-muscle-5.1, zlib1g, libgcc-s1, gensoft-blast+-2.12.0, libc6, libstdc++6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-virsorter-2.2.3_2.0_amd64.deb
Size: 111192736
MD5sum: ee2a14de57c35819547674faa9952ad8
SHA1: beb3a5a0a718219ae02b558d8b49442464446242
SHA256: 2b9e8f2352237338e11d79a55750908bc39c8106fcb49f054c1837f5807b7d30
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: mining viral signal from microbial genomic data
License: unknown
Vendor: Institut Pasteur

Package: gensoft-virtualgl-2.6.5
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 5347
Depends: gensoft-xorg-libs-1.1, gensoft-libjpeg-turbo-2.0.6, gensoft-mesa-19.0.8, gensoft-gcc-9.2.0, gensoft-expat-2.2.9, libc6, libssl1.1, zlib1g, libgcc-s1, gensoft-glu-9.0.1, gensoft-libdrm-2.4.100
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-virtualgl-2.6.5_1.0_amd64.deb
Size: 2185766
MD5sum: de8baf35a61e993632cc721af051b35c
SHA1: 1dbdbcd234bc91937a74f44d064ac840c0ffc8b7
SHA256: 06a5070f98cda65befbb289fe199503a3daf0357b8ddb78aa8b2aec0d20de48a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: VirtualGL is an open source toolkit that gives any Unix or Linux remote display software the ability to run OpenGL applications with full 3D hardware acceleration.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-virtualgl-3.0.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 5797
Depends: libssl1.1, libc6, gensoft-libdrm-2.4.100, gensoft-gcc-9.2.0, libgcc-s1, gensoft-expat-2.4.1, zlib1g, gensoft-mesa-19.0.8, gensoft-xorg-libs-1.1, gensoft-glu-9.0.1, gensoft-libjpeg-turbo-2.0.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-virtualgl-3.0.2_1.0_amd64.deb
Size: 2377068
MD5sum: 3a81fcd7e05ca364b56a0b6d52e5a263
SHA1: d6291347671410629e8ac5a5d583707e9a4d47a3
SHA256: b6dd28b4b98c7c696b028d68b692a1ef6533142fb67e34ae84764e608583bb24
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: VirtualGL is an open source toolkit that gives any Unix or Linux remote display software the ability to run OpenGL applications with full 3D hardware acceleration.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vmatch-2.3.1
Version: 2.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 32848
Depends: zlib1g, libc6, gensoft-adm-perl-5.30.1, libbz2-1.0, gensoft-genometools-1.6.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vmatch-2.3.1_2.0_amd64.deb
Size: 10201078
MD5sum: c0bcb03a047d51dd0fa29e3299779d85
SHA1: dfc9af2aeebdecaa1ce212136b8781c34db82a6b
SHA256: 21b92442a1d2ebea00ab636624b84304f01807f076e324faf76d3b83e2881b9b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Transmembrane topology prediction
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vmd-plugins-1.9.3
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 71923
Depends: libc6, libgcc-s1, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vmd-plugins-1.9.3_1.0_amd64.deb
Size: 11706058
MD5sum: fcf96e31fe8c66b3c6afbe2f4e8732eb
SHA1: c754900d1b4d3351da396d36e6af482702843850
SHA256: e2d3d5500da2bd7a04f9f0e528a459f15813e81ca196ae0a9a86745408f1c1a2
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: plugin interfaces which provide a means for extending VMD at run-time without the necessity to recompile the program
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vol-1.5.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 312
Depends: gensoft-coinutils-2.11.4, libc6, gensoft-osi-0.108.6, gensoft-lapack-3.9.0, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vol-1.5.4_1.0_amd64.deb
Size: 102716
MD5sum: 988bf6f13b2d9929ce805b2da73befc5
SHA1: dc03bf5933352a74e9240a8de17684807b6167fc
SHA256: b1ae182e45671765c3a03a4be8a5df11d9062a742d529108a22a95facb5283d1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Vol (Volume Algorithm) is an open-source implementation of a subgradient method that produces primal as well as dual solutions.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vsearch-2.14.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3988
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vsearch-2.14.2_1.0_amd64.deb
Size: 1541074
MD5sum: a2b94678bfd908825bf2744b859d6611
SHA1: 315d468309c651ed308c5e423c5cfcf04b3820b8
SHA256: f430075f9144897d26d6e4cd6fe1140fd6b5c5efb7563f33e8f341fb872c5967
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for processing metagenomic sequences  which supports searching, clustering, chimera detection, dereplication, sorting and masking. An alternative to the USEARCH tool developed by Robert C. Edgar (2010).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vsearch-2.17.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3755
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vsearch-2.17.0_1.0_amd64.deb
Size: 1453070
MD5sum: d2d1331cc5fe86b6a878630693e91d20
SHA1: cbf1b4847e06cfa74997658fb19d2f90f3917d9d
SHA256: 629cbfe22eb3281f112596a0804fe80bf52de794f8611bfcc489bdb65cb2e68d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for processing metagenomic sequences  which supports searching, clustering, chimera detection, dereplication, sorting and masking. An alternative to the USEARCH tool developed by Robert C. Edgar (2010).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vsearch-2.7.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3243
Depends: libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vsearch-2.7.1_1.0_amd64.deb
Size: 1079142
MD5sum: 053657fc67e0c8745c5d2687f590f709
SHA1: 2688e20966d104605d4671e0b413eb635d7221c1
SHA256: 4f58bea617619498a36231d1fb4c9fb01702437b1b448abd0328f4e222fe1cd4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: a tool for processing metagenomic sequences  which supports searching, clustering, chimera detection, dereplication, sorting and masking. An alternative to the USEARCH tool developed by Robert C. Edgar (2010).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vt-0.57721
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 6042
Depends: gensoft-curl-7.68.0, gensoft-gcc-9.2.0, libssl1.1, libc6, gensoft-xz-5.2.4, libbz2-1.0, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vt-0.57721_1.0_amd64.deb
Size: 2256760
MD5sum: f1d408b49ca8fe2811df0bcd7df971ae
SHA1: bdec0844b72a3819c1aaadbe15bf68d7ec183f26
SHA256: c76cc732cebe8d183acbc5bfead1f5750f48095e7b338ceb40254726aea8567e
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: vt is a variant tool set that discovers short variants from Next Generation Sequencing data.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-vtk-8.2.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 465806
Depends: gensoft-xorg-libs-1.1, gensoft-glu-9.0.1, gensoft-libdrm-2.4.100, gensoft-mesa-19.0.8, gensoft-gcc-9.2.0, zlib1g, gensoft-expat-2.2.9, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-vtk-8.2.0_1.0_amd64.deb
Size: 134428224
MD5sum: 233e39989688d60d962c1fc6c4b7ebd3
SHA1: 1c771547c9739b893a651acf155e3ae6cdb5c3ec
SHA256: d3ff8644d0d9f868a0153e37910aa0326118708e26ce667d77a87d513ef099eb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Visualization Toolkit (VTK) is open source software for manipulating and displaying scientific data. It comes with state-of-the-art tools for 3D rendering, a suite of widgets for 3D interaction, and extensive 2D plotting capability.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-w2rap-contigger-docker
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 37249
Depends: gensoft-gcc-9.2.0, zlib1g, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-w2rap-contigger-docker_1.0_amd64.deb
Size: 12476226
MD5sum: 104706e6c38ca0df6ca184de8cb8b5fe
SHA1: caac1c6722eb2495c53b999dde53bb38572d8f6e
SHA256: 990000423a33c042805ae9de234ffcfbd5d423b4f357d57a2478574c88cd0a1b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wayland-1.19.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1293
Depends: gensoft-expat-2.2.9, gensoft-libiconv-1.16, gensoft-libxml2-2.9.10, gensoft-libffi-3.2.1, gensoft-xz-5.2.4
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wayland-1.19.0_1.0_amd64.deb
Size: 403614
MD5sum: e4e4b7921fd833de4fb1a46222d586d6
SHA1: 932b7baee0332355d24e88aadec80ba3d6ba0936
SHA256: cc2c6e9da53d4f78eb4a240e7c7a30ddcbc91ff205762b676a9eaf1ec53b6bfb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Wayland is a protocol for a compositor to talk to its clients as well as a C library implementation of that protocol. The compositor can be a standalone display server running on Linux kernel modesetting and evdev input devices, an X application, or a wayland client itself. The clients can be traditional applications, X servers (rootless or fullscreen) or other display servers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wayland-protocols-1.20
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 408
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wayland-protocols-1.20_1.0_amd64.deb
Size: 88004
MD5sum: 696ae5328f80936832b8b023bc0c77e2
SHA1: 875eec0d3f06e1499c6509652f79f64570d6bea7
SHA256: 8ad61999f19662e72b1e8617fd76bd71a69bfdd4a638946b1da41ab55c12973d
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Wayland is a protocol for a compositor to talk to its clients as well as a C library implementation of that protocol. The compositor can be a standalone display server running on Linux kernel modesetting and evdev input devices, an X application, or a wayland client itself. The clients can be traditional applications, X servers (rootless or fullscreen) or other display servers.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-weblogo-2.8.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 296
Depends: gensoft-imagemagick-6.9.10-91, gensoft-adm-perl-5.30.1, gensoft-ghostscript-9.50
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-weblogo-2.8.2_1.0_amd64.deb
Size: 178504
MD5sum: dd0a915bb25b000ff62610a96fdeda86
SHA1: 6ddbd0f6c85ec7c5c938554607b8fa886c97114e
SHA256: f27efcfe58611b173eb9b1caef702af56da645ddc35d47b7ddc1f610f02e37ae
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: application designed to make the generation of sequence logos as easy and painless as possible
License: unknown
Vendor: Institut Pasteur

Package: gensoft-weblogo-3.7.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 147084
Depends: gensoft-adm-python-3.8.1, gensoft-ghostscript-9.50
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-weblogo-3.7.4_1.0_amd64.deb
Size: 46986344
MD5sum: 5d8a5e3276f66af4b2b330fe47ebbf07
SHA1: 047bcd83d13902cd4ebd1d02d1fdb6f6a96a8fde
SHA256: f4c16e80dab2b40fe0a9d674b72017ec90ec1dfd2023a92563a1ae5708ce6f35
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: application designed to make the generation of sequence logos as easy and painless as possible
License: unknown
Vendor: Institut Pasteur

Package: gensoft-weighbor-1.2.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 102
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-weighbor-1.2.1_1.0_amd64.deb
Size: 46108
MD5sum: 4c0fb00e29d0cfb8a62713967088b539
SHA1: c8e8db1dcfdd1b8dc8483e152e5b8ed8e880ed13
SHA256: 1999eef324014d5a11293ebf51d022e80dd775426d6e87c8a1a7b993a44c071a
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Weighted Neighbor Joining
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wfmash-0.10.2
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 2002
Depends: gensoft-gcc-9.2.0, gensoft-jemalloc-5.2.1, libc6, libbz2-1.0, gensoft-htslib-1.16, zlib1g, gensoft-xz-5.2.5, libssl1.1, gensoft-curl-7.68.0, gensoft-gsl-2.6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wfmash-0.10.2_1.0_amd64.deb
Size: 715284
MD5sum: 61396f6835d1aded7eeba317c9424111
SHA1: 45a3c8f2652e1d890d6f845aba6fc830269eb893
SHA256: 795e2c31ad2c605c2f91133a012bd0ba674beecc3040fc9dd930b2ca75ec7885
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A DNA sequence read mapper based on mash distances and the wavefront alignment algorithm.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wfmash-0.7.0
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 18483
Depends: gensoft-jemalloc-5.2.1, gensoft-gsl-2.6, zlib1g, gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wfmash-0.7.0_1.0_amd64.deb
Size: 4078550
MD5sum: a41b952f17f4a652c303005da71ae488
SHA1: 3a3b623aa944ff91262b7e12d58f7f60279d3b6f
SHA256: 063ecd978faa9aad21872946323e843c3a17e37f3c91676239fd3b20fd260491
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A DNA sequence read mapper based on mash distances and the wavefront alignment algorithm.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wfmash-0.9.1
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 1933
Depends: gensoft-gcc-9.2.0, gensoft-gsl-2.6, libc6, gensoft-jemalloc-5.2.1, libssl1.1, libbz2-1.0, gensoft-xz-5.2.5, gensoft-curl-7.68.0, gensoft-htslib-1.13, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wfmash-0.9.1_1.0_amd64.deb
Size: 699750
MD5sum: 340b4da4da20ba93a9941e6c589b24ca
SHA1: 5e7b54f22b866610e155b5962ebdf65093d1fedd
SHA256: 1975685e92529a8f2047eafb57aa5fdf9be8c02a9996bebe9a4bdfc642db689c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A DNA sequence read mapper based on mash distances and the wavefront alignment algorithm.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wgs-8.3rc2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 65415
Depends: gensoft-gcc-9.2.0, zlib1g, gensoft-adm-perl-5.30.1, libc6, csh, gensoft-graalvm-ce-java8-20.0.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wgs-8.3rc2_1.0_amd64.deb
Size: 33211220
MD5sum: 3ae52618000c9aebd09873232410862a
SHA1: 6525d543066c5f7eebdc7735936a088112c328a2
SHA256: 23f3a0ce075e7b13378c36d3929121973c9ac9e22ddd1730ccc584d6577856b1
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Celera Assembler is a de novo whole-genome shotgun (WGS) DNA sequence assembler. It reconstructs long sequences of genomic DNA from fragmentary data produced by whole-genome shotgun sequencing
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wiggletools-1.2.11
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 115116
Depends: gensoft-adm-python-2.7.17, gensoft-xz-5.2.4, gensoft-libbigwig-0.4.6, zlib1g, libstdc++6, libssl1.1, gensoft-htslib-1.13, gensoft-gsl-2.6, libgcc-s1, libbz2-1.0, libc6, gensoft-curl-7.68.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wiggletools-1.2.11_1.0_amd64.deb
Size: 37840650
MD5sum: ad4db80017a3819ae15a0b3de32d1800
SHA1: 36989bae5aa509aae6e8698bbac2af3e9f280fa3
SHA256: f1d341a4d5d491e76e224ea1f6afce002f640e630399bb717f520bf10c0936f5
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The WiggleTools package allows genomewide data files to be manipulated as numerical functions, equipped with all the standard functional analysis operators (sum, product, product by a scalar, comparators), and derived statistics (mean, median, variance, stddev, t-test, Wilcoxon s rank sum test, etc).
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wise2-2.4.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 13233
Depends: libc6, gensoft-glib-2.58.3
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wise2-2.4.1_1.0_amd64.deb
Size: 5238780
MD5sum: bf014512ee504cb8f2745d6f7f1bd9bf
SHA1: 73a272043a05a2094896c641453b55f1085ee9b8
SHA256: cb45ab8c9cd681b0b1d679c8fbf7f1d5aa3804586d6d0927c30035b782f5d6ed
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A package focused on comparisons of bio polymers, commonly DNA sequence and protein sequence
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wxwidgets-3.0.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 30508
Depends: gensoft-freetype-2.10.1, gensoft-harfbuzz-2.6.4, libbz2-1.0, libc6, gensoft-libffi-3.3, libpcre3, gensoft-cairo-1.16.0, gensoft-libjpeg-turbo-2.0.4, gensoft-gcc-9.2.0, gensoft-gtk+-2.24.32, gensoft-libpng-1.6.37, gensoft-atk-2.9.4, gensoft-glib-2.58.3, gensoft-libtiff-4.1.0, zlib1g, gensoft-pixman-0.38.4, libselinux1, gensoft-xorg-libs-1.1, gensoft-pcre2-10.34, gensoft-pango-1.42.4, gensoft-expat-2.2.9, gensoft-gdk-pixbuf-2.36.12, gensoft-xz-5.2.4, gensoft-fontconfig-2.13.91
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wxwidgets-3.0.2_1.0_amd64.deb
Size: 9811690
MD5sum: 58b3ebfd4862c104a5c97c160adb22e8
SHA1: b91b09f44a2781ed77591b37ae7536549a6ca593
SHA256: 8fcce8fa69a14074244da73f66f6c2279dd1341c14eb141e3bf917453f91f8ef
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: wxWidgets is a C++ library that lets developers create applications for Windows, Mac OS X, Linux and other platforms with a single code base
License: unknown
Vendor: Institut Pasteur

Package: gensoft-wxwidgets-3.1.3
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 32766
Depends: gensoft-fontconfig-2.13.91, gensoft-expat-2.2.9, libblkid1, libfribidi0, gensoft-harfbuzz-2.6.4, gensoft-xz-5.2.4, gensoft-atk-2.9.4, gensoft-libpng-1.6.37, gensoft-pango-1.42.4, gensoft-glib-2.58.3, gensoft-libjpeg-turbo-2.0.4, libselinux1, libpcre2-8-0, gensoft-gdk-pixbuf-2.36.12, libmount1, gensoft-xorg-libs-1.1, gensoft-gcc-9.2.0, libc6, libbz2-1.0, gensoft-libtiff-4.1.0, zlib1g, gensoft-freetype-2.10.1, gensoft-cairo-1.16.0, gensoft-libffi-3.3, gensoft-pixman-0.38.4, gensoft-gtk+-2.24.32, gensoft-pcre2-10.34
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-wxwidgets-3.1.3_1.0_amd64.deb
Size: 10453908
MD5sum: 466490729e5f5cc6b5af8bc41136597b
SHA1: 4bfe14c9a1b01ce1996012b56191910c16e148c0
SHA256: ae269605bb0431bb9fa1c642cf04fe79476e7415c043d9771f0e708c2da45e04
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: wxWidgets is a C++ library that lets developers create applications for Windows, Mac OS X, Linux and other platforms with a single code base
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xcb-util-0.3.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1254
Depends: gensoft-xorg-libs-1.1, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xcb-util-0.3.9_1.0_amd64.deb
Size: 334898
MD5sum: 8c84ac009a25d9b9a29d2b0a74c5999d
SHA1: cfce2a65a852e115319597bff252490f166aa3b4
SHA256: 72b57548b3a20a67b2251b5b0be33bf6498362085044bf6481096e9595574b36
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The XCB util modules provides a number of libraries which sit on top of libxcb, the core X protocol library, and some of the extension libraries. These experimental libraries provide convenience functions and interfaces which make the raw X protocol more usable. Some of the libraries also provide client-side code which is not strictly part of the X protocol but which have traditionally been provided by Xlib.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xdrfile-1.1.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 219
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xdrfile-1.1.4_1.0_amd64.deb
Size: 74716
MD5sum: 985a26974e63b1896a46fb2f858a2039
SHA1: ab35568d174e79e6c4a95cc9392e6316af70b253
SHA256: b520be1d93acc6e74651159f46a4b7ef7f8827534a53a496645599e01aca6850
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: library to read GROMACS trr and xtc files and also to convert from one format to another.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xerces-c-3.2.2
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 129181
Depends: gensoft-curl-7.68.0, zlib1g, libssl1.1, libc6, gensoft-gcc-9.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xerces-c-3.2.2_1.0_amd64.deb
Size: 30316734
MD5sum: 748af1a639303af90d4041684ee5a728
SHA1: 0f087e3162867d2cca3ca0979ad027d91a79e28a
SHA256: c61cbce388f67c5ff840de601432662af9f0033bc8f10aa43b54b94b24310bdf
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A processor for parsing, validating, serializing and manipulating XML.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xorg-libs-1.1
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 139931
Depends: zlib1g, gensoft-freetype-2.10.1, gensoft-fontconfig-2.13.91, gensoft-expat-2.2.9, libc6, libbz2-1.0, gensoft-libpng-1.6.37
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xorg-libs-1.1_1.0_amd64.deb
Size: 39527028
MD5sum: 4a51b5023017983fad8d1a6c824d9687
SHA1: 36247ea31d121a1b2ae02fe8727ad470a11d9bfb
SHA256: 3ec8b9ee0f5f78181ff02bd2c61f6df32f1ae323c7112a5e5cebbee7cf10d9e0
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: the Xorg libraries provide library routines that are used within all X Window applications. this metapackage embeds following protos and libraries - compositeproto-0.4.2 fontsproto-2.1.3 recordproto-1.14.2 bigreqsproto-1.1.2 fixesproto-5.0 xproto-7.0.29 xextproto-7.3.0 xf86dgaproto-2.1 renderproto-0.11.1 randrproto-1.5.0 damageproto-1.2.1 resourceproto-1.2.0 kbproto-1.0.7 inputproto-2.3.2 videoproto-2.3.3 xf86vidmodeproto-2.3.1 glproto-1.4.17 dri2proto-2.8 dri3proto-1.0 presentproto-1.1 libpthread-stubs-0.1 xtrans-1.4.0 libfontenc-1.1.4 libXfont-1.5.4 libXfont2-2.0.4 libICE-1.0.9 libSM-1.2.3 libXau-1.0.9 libFS-1.0.8 libxshmfence-1.3 xcb-proto-1.13 libxcb-1.13 libX11-1.6.9 libXext-1.3.4 libXfixes-5.0.3 libXi-1.7.9 libXt-1.2.0 libXmu-1.1.3 libXpm-3.5.13 libXaw-1.0.13 libXcomposite-0.4.5 libXrender-0.9.10 libXrandr-1.5.2 libXft-2.3.3 libXcursor-1.2.0 libxkbfile-1.1.0 libXdamage-1.1.5 libXres-1.2.0 libXtst-1.2.3 libXv-1.0.11 libXxf86dga-1.1.5 libXxf86vm-1.1.4 libpciaccess-0.16 libXdmcp-1.1.3 xkeyboard-config-2.28 xbitmaps-1.1.2 libXScrnSaver-1.2.3
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xp-clr-1.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 93
Depends: gensoft-gcc-9.2.0, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xp-clr-1.0_1.0_amd64.deb
Size: 32512
MD5sum: 7c80cf3e321cbf0c04d30e3634ef2a9f
SHA1: b14ae3487cbab938b32df5afc4497fbac44e426a
SHA256: 85683d7e1349676bc1e1377aee6b3a411edcf2f4b225fbb83aa50b7a8147e3cb
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: XP-CLR uses allele frequency differentiation at linked loci to detect selective sweeps.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xpdf-4.03
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 22799
Depends: gensoft-nettle-3.5.1, gensoft-gcc-9.2.0, gensoft-libpng-1.6.37, gensoft-glib-2.58.3, gensoft-fontconfig-2.13.91, gensoft-expat-2.2.9, gensoft-gmp-6.2.0, gensoft-icu-65.1, gensoft-pcre2-10.34, gensoft-gnutls-3.6.11, gensoft-harfbuzz-2.6.4, gensoft-ghostscript-9.50, gensoft-qt-5.12.1, gensoft-cups-2.3.1, gensoft-freetype-2.10.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xpdf-4.03_1.0_amd64.deb
Size: 7185236
MD5sum: 0d6f8173f6296a04782b30a80fec55aa
SHA1: b30b729020f2a16aac3eda55613d4d1ca52ea189
SHA256: e881da16aa52227f0800af456d8d9eb55b9417b51dbf10f6498f2b3b339ad653
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Xpdf is a viewer for Adobe free Portable Document Format (PDF) which is both fast and small and comes with some useful command-line utilities
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xpound-na
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 2087
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xpound-na_1.0_amd64.deb
Size: 683614
MD5sum: 6bf28aab574171c98935c96e75e00ac4
SHA1: 0570ba45604630782d5141940be5892c4fe55c82
SHA256: fe0aa687cfb7ef3d0da527939e1a4c4d7e5e9dcdd5f121d45e36835280400ec7
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Software for exon trapping
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xxd-1.10
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 23
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xxd-1.10_1.0_amd64.deb
Size: 10124
MD5sum: c31ddd6271ccfb0d8311578874cf58b0
SHA1: a2f5f57ebd948df02d28150deeba35fcfcc275cd
SHA256: b47d9eb7a6d253cb6c9bed1966d11a435c52cc3132b061f8e45da7ae115155b4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: hexadecimal dump and undump utility in C.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xxr-3.03
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 160
Depends: gensoft-adm-perl-5.30.1
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xxr-3.03_1.0_amd64.deb
Size: 49816
MD5sum: fead9153e864ed1eddde3deca01bfa7d
SHA1: 26649fbc004c06cc2838e577c79dc006522d9855
SHA256: b9f7ef8ba6933c1d78be897ddf433c10b45029e7e9d6cb12bf2b6a54983acab4
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: This software is able to extract putative cassette structures that fulfill the criteria established from analysis of previously known cassettes from integrons and superintegrons
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xz-5.2.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3851
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xz-5.2.4_1.0_amd64.deb
Size: 1131988
MD5sum: dd2452346781fa2f62a5b9a1b6bd10da
SHA1: f8a095a5ec79281d170c2ccef96d3fa9c1f27330
SHA256: 4ac6043992aca6e67bc84b219a3a1dff4502b257455d8792769565fbd6353e7b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: XZ Utils is free general-purpose data compression software with a high compression ratio
License: unknown
Vendor: Institut Pasteur

Package: gensoft-xz-5.2.5
Version: 1.0
Architecture: amd64
Maintainer: hpc@pasteur.fr
Installed-Size: 4083
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-xz-5.2.5_1.0_amd64.deb
Size: 1190984
MD5sum: 195207a5d7926fe9d4c8dd1023c7c41f
SHA1: d8335d39da00bd27bdc9f635f338382613f6bf46
SHA256: 6a91e8173f8eb9f4e3c60b7f04c3883ed89232cc0ae55643b3b3b87b97b47f30
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: XZ Utils is free general-purpose data compression software with a high compression ratio
License: unknown
Vendor: Institut Pasteur

Package: gensoft-yacc-1.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 387
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-yacc-1.9_1.0_amd64.deb
Size: 148958
MD5sum: e28957249ee42a9764f9ee0824981cab
SHA1: 9a0ec50bebc0d76ec374178e959ec3841594fac7
SHA256: 61080289ae8ca57979655a14bc6907e575c668c579412a31e5852a7be96313d3
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: yacc (Yet Another Compiler-Compiler) an LALR parser generator
License: unknown
Vendor: Institut Pasteur

Package: gensoft-yara-v0.9.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 10665
Depends: gensoft-gcc-9.2.0, gensoft-zlib-1.2.11, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-yara-v0.9.11_1.0_amd64.deb
Size: 2274760
MD5sum: 11e207cdab8001ebe4aa74d29263693b
SHA1: d41f30be17e5f9d0896572f38c8b537c7562cdbb
SHA256: 1367b2449f4907c938052e4cc0c057ab8e3df57395d43ae4851e3f93dfcf466b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Yara is yet another read aligner.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-yasm-1.3.0
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 14133
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-yasm-1.3.0_1.0_amd64.deb
Size: 4648912
MD5sum: e191e9e8bf67855158ed43239b2a2756
SHA1: 4d6f9d03a9a75a292d733b09c677695af73e343f
SHA256: 1066fe1d0ca89114857db866891b8c59ae6659d81d2292c280bc471e91aead25
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Yasm is a complete rewrite of the NASM-2.15.05 assembler. It supports the x86 and AMD64 instruction sets, accepts NASM and GAS assembler syntaxes and outputs binary, ELF32 and ELF64 object formats.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-z3-4.8.9
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 1120312
Depends: libc6, gensoft-gcc-9.2.0, gensoft-gmp-6.2.0
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-z3-4.8.9_1.0_amd64.deb
Size: 355459026
MD5sum: a10b2e5c63446cdb57c91b34a6377d8e
SHA1: 7429bf6bc1d561928d3fd39fc24a9d23d319f9c9
SHA256: 21d0fc354b0e053a7898930940347f0b81a1a0b973bdb1e629c36f436943f444
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: The Z3 Theorem Prover
License: unknown
Vendor: Institut Pasteur

Package: gensoft-zlib-1.2.11
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 564
Depends: libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-zlib-1.2.11_1.0_amd64.deb
Size: 210480
MD5sum: 892865170e6bfff508ca84900f560704
SHA1: 04fe48f420cea45f271e83cf36be89b7371a864a
SHA256: e2b7f9cb2ee22655102dabfa193fde48dee305f0dff90ddaf796f423ee6e575b
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: A Massively Spiffy Yet Delicately Unobtrusive Compression Library
License: unknown
Vendor: Institut Pasteur

Package: gensoft-zstd-1.4.4
Version: 1.0
Architecture: amd64
Maintainer: edeveaud@pasteur.fr
Installed-Size: 3417
Depends: libc6, zlib1g
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-zstd-1.4.4_1.0_amd64.deb
Size: 1407734
MD5sum: 4f44417c5f4df9b2674e5e578b797c90
SHA1: 8670676a68858a38dfddf08977a75a01609c1c72
SHA256: 77fba47cc0b26990e03f341fee62f24bd4cdd5ff3373bfe81f06e1ab4ad1fd8c
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Zstandard is a real-time compression algorithm, providing high compression ratios. It offers a very wide range of compression / speed trade-off, while being backed by a very fast decoder. It also offers a special mode for small data, called dictionary compression, and can create dictionaries from any sample set.
License: unknown
Vendor: Institut Pasteur

Package: gensoft-zstd-1.5.4
Version: 1.0
Architecture: amd64
Maintainer: gensoft@pasteur.fr
Installed-Size: 3757
Depends: gensoft-xz-5.2.5, zlib1g, gensoft-lz4-1.9.2, libc6
Filename: /pasteur/zeus/services/p01/gensoft/repos/pub/apt/pool/main/gensoft-zstd-1.5.4_1.0_amd64.deb
Size: 1557962
MD5sum: 764ea60dbbc97185e30a91c5ed6f8427
SHA1: 9455f26315f296dd3df7f9df1d1a33be9af2249f
SHA256: 4a241576a3813a579341b0d7a385f6ada1a4d8d8bd424ea1905f715a6aa8ff69
Section: default
Priority: extra
Homepage: http://example.com/no-uri-given
Description: Zstandard is a real-time compression algorithm, providing high compression ratios. It offers a very wide range of compression / speed trade-off, while being backed by a very fast decoder. It also offers a special mode for small data, called dictionary compression, and can create dictionaries from any sample set.
License: unknown
Vendor: Institut Pasteur