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xmipp_alignPCA_2D/xmipp_angular_accuracy_pca/xmipp_angular_assignment_mag/xmipp_angular_break_symmetry/xmipp_angular_commonline/xmipp_angular_continuous_assign/xmipp_angular_continuous_assign2/xmipp_angular_discrete_assign/xmipp_angular_distance/xmipp_angular_distribution_show/xmipp_angular_estimate_tilt_axis/xmipp_angular_neighbourhood/xmipp_angular_project_library/xmipp_angular_projection_matching/xmipp_angular_rotate/xmipp_angular_sph_alignment/xmipp_art_zernike3d/xmipp_cl2d_clustering/xmipp_classify_analyze_cluster/xmipp_classify_compare_classes/xmipp_classify_evaluate_classes/xmipp_classify_extract_features/xmipp_classify_first_split/xmipp_classify_first_split3/xmipp_classify_kerdensom/xmipp_compare_density/xmipp_compare_views/xmipp_compile/xmipp_continuous_create_residuals/xmipp_coordinates_consensus/xmipp_coordinates_noisy_zones_filter/xmipp_ctf_correct_phase/xmipp_ctf_correct_wiener2d/xmipp_ctf_correct_wiener3d/xmipp_ctf_enhance_psd/xmipp_ctf_estimate_from_micrograph/xmipp_ctf_estimate_from_psd/xmipp_ctf_estimate_from_psd_fast/xmipp_ctf_group/xmipp_ctf_phase_flip/xmipp_ctf_sort_psds/xmipp_cuda_align_significant/xmipp_cuda_angular_continuous_assign2/xmipp_cuda_angular_sph_alignment/xmipp_cuda_forward_art_zernike3d/xmipp_cuda_movie_alignment_correlation/xmipp_cuda_reconstruct_fourier/xmipp_cuda_volume_deform_sph/xmipp_cuda_volume_halves_restoration/xmipp_deepRes_resolution/xmipp_deep_consensus/xmipp_deep_global_assignment/xmipp_deep_global_assignment_predict/xmipp_deep_hand/xmipp_deep_micrograph_cleaner/xmipp_deep_misalignment_detection/xmipp_deep_volume_postprocessing/xmipp_denoising_tv/xmipp_extract_particles/xmipp_flexible_alignment/xmipp_forward_art_zernike3d_subtomos/xmipp_forward_zernike_images/xmipp_forward_zernike_images_priors/xmipp_forward_zernike_subtomos/xmipp_forward_zernike_volume/xmipp_graph_max_cut/xmipp_image_align/xmipp_image_align_tilt_pairs/xmipp_image_assignment_tilt_pair/xmipp_image_convert/xmipp_image_eliminate_byEnergy/xmipp_image_eliminate_empty_particles/xmipp_image_find_center/xmipp_image_header/xmipp_image_histogram/xmipp_image_odd_even/xmipp_image_operate/xmipp_image_peak_high_contrast/xmipp_image_residuals/xmipp_image_resize/xmipp_image_rotational_pca/xmipp_image_sort_by_statistics/xmipp_image_ssnr/xmipp_image_statistics/xmipp_image_vectorize/xmipp_local_volume_adjust/xmipp_matrix_dimred/xmipp_metadata_histogram/xmipp_metadata_import/xmipp_metadata_plot/xmipp_metadata_selfile_create/xmipp_metadata_split/xmipp_metadata_split_3D/xmipp_metadata_utilities/xmipp_metadata_xml/xmipp_micrograph_automatic_picking/xmipp_micrograph_scissor/xmipp_ml_align2d/xmipp_mlf_align2d/xmipp_movie_alignment_correlation/xmipp_movie_estimate_gain/xmipp_movie_filter_dose/xmipp_mpi_angular_accuracy_pca/xmipp_mpi_angular_assignment_mag/xmipp_mpi_angular_class_average/xmipp_mpi_angular_continuous_assign/xmipp_mpi_angular_continuous_assign2/xmipp_mpi_angular_discrete_assign/xmipp_mpi_angular_project_library/xmipp_mpi_angular_projection_matching/xmipp_mpi_angular_sph_alignment/xmipp_mpi_classify_CL2D/xmipp_mpi_classify_CL2D_core_analysis/xmipp_mpi_classify_CLTomo/xmipp_mpi_classify_CLTomo_prog/xmipp_mpi_classify_FTTRI/xmipp_mpi_continuous_create_residuals/xmipp_mpi_ctf_correct_phase/xmipp_mpi_ctf_correct_wiener2d/xmipp_mpi_ctf_sort_psds/xmipp_mpi_cuda_reconstruct_fourier/xmipp_mpi_forward_zernike_images/xmipp_mpi_forward_zernike_images_priors/xmipp_mpi_forward_zernike_subtomos/xmipp_mpi_image_eliminate_byEnergy/xmipp_mpi_image_operate/xmipp_mpi_image_resize/xmipp_mpi_image_rotational_pca/xmipp_mpi_image_sort/xmipp_mpi_image_ssnr/xmipp_mpi_ml_align2d/xmipp_mpi_mlf_align2d/xmipp_mpi_multireference_aligneability/xmipp_mpi_nma_alignment/xmipp_mpi_nma_alignment_vol/xmipp_mpi_performance_test/xmipp_mpi_reconstruct_art/xmipp_mpi_reconstruct_fourier/xmipp_mpi_reconstruct_fourier_accel/xmipp_mpi_reconstruct_significant/xmipp_mpi_reconstruct_wbp/xmipp_mpi_run/xmipp_mpi_subtomo_subtraction/xmipp_mpi_subtract_projection/xmipp_mpi_transform_adjust_image_grey_levels/xmipp_mpi_transform_filter/xmipp_mpi_transform_geometry/xmipp_mpi_transform_mask/xmipp_mpi_transform_normalize/xmipp_mpi_transform_symmetrize/xmipp_mpi_transform_threshold/xmipp_mpi_validation_nontilt/xmipp_mpi_volumeset_align/xmipp_mpi_write_test/xmipp_multireference_aligneability/xmipp_nma_alignment/xmipp_nma_alignment_vol/xmipp_pdb_analysis/xmipp_pdb_center/xmipp_pdb_label_from_volume/xmipp_pdb_nma_deform/xmipp_pdb_reduce_pseudoatoms/xmipp_pdb_select/xmipp_pdb_sph_deform/xmipp_phantom_create/xmipp_phantom_movie/xmipp_phantom_project/xmipp_phantom_simulate_microscope/xmipp_phantom_transform/xmipp_pick_noise/xmipp_preprocess_mics/xmipp_psd_estimate/xmipp_reconstruct_art/xmipp_reconstruct_fourier/xmipp_reconstruct_fourier_accel/xmipp_reconstruct_significant/xmipp_reconstruct_wbp/xmipp_resolution_directional/xmipp_resolution_fsc/xmipp_resolution_fso/xmipp_resolution_localfilter/xmipp_resolution_monogenic_signal/xmipp_resolution_monotomo/xmipp_resolution_pdb_bfactor/xmipp_showj/xmipp_subtomo_subtraction/xmipp_subtract_projection/xmipp_swiftalign_aligned_2d_classification/xmipp_swiftalign_wiener_2d/xmipp_sync_data/xmipp_test_cif_main/xmipp_test_ctf_main/xmipp_test_cuda_fft/xmipp_test_cuda_flexalign_correlate/xmipp_test_cuda_geo_transformer_apply_bspline_transform/xmipp_test_cuda_geo_transformer_produce_and_load_coeffs/xmipp_test_cuda_iterative_alignment_estimator/xmipp_test_cuda_polar_rotation_estimator/xmipp_test_cuda_shift_corr_estimator/xmipp_test_cuda_single_extrema_finder/xmipp_test_cuda_volume_halves_restoration/xmipp_test_dimred_main/xmipp_test_euler_main/xmipp_test_fftw_main/xmipp_test_fftwt/xmipp_test_filename_main/xmipp_test_filters_main/xmipp_test_fringe_processing_main/xmipp_test_funcs_main/xmipp_test_geometry_main/xmipp_test_image_generic_main/xmipp_test_image_main/xmipp_test_iterative_alignment_estimator/xmipp_test_matrix_main/xmipp_test_metadata_db_main/xmipp_test_metadata_vec_main/xmipp_test_movie_filter_dose/xmipp_test_multidim_main/xmipp_test_pocs_main/xmipp_test_polar_main/xmipp_test_polar_rotation_estimator/xmipp_test_polynomials_main/xmipp_test_psd_estimator/xmipp_test_radAvgNonCubic_main/xmipp_test_resolution_frc/xmipp_test_sampling_main/xmipp_test_script_importing_module/xmipp_test_shift_corr_estimator/xmipp_test_single_extrema_finder/xmipp_test_symmetries_main/xmipp_test_transform_window/xmipp_test_transformation_main/xmipp_test_volume_subtraction_main/xmipp_test_wavelets_main/xmipp_tomo_average_subtomos/xmipp_tomo_calculate_landmark_residuals/xmipp_tomo_detect_landmarks/xmipp_tomo_detect_missing_wedge/xmipp_tomo_extract_particlestacks/xmipp_tomo_extract_subtomograms/xmipp_tomo_filter_coordinates/xmipp_tomo_map_back/xmipp_tomo_misalignment_resid_statistics/xmipp_tomo_project/xmipp_tomo_simulate_tilt_series/xmipp_tomo_tiltseries_dose_filter/xmipp_tomogram_reconstruction/xmipp_transform_add_noise/xmipp_transform_adjust_image_grey_levels/xmipp_transform_adjust_volume_grey_levels/xmipp_transform_center_image/xmipp_transform_dimred/xmipp_transform_downsample/xmipp_transform_filter/xmipp_transform_geometry/xmipp_transform_mask/xmipp_transform_mirror/xmipp_transform_morphology/xmipp_transform_normalize/xmipp_transform_randomize_phases/xmipp_transform_symmetrize/xmipp_transform_threshold/xmipp_transform_window/xmipp_validation_nontilt/xmipp_volume_align/xmipp_volume_apply_coefficient_zernike3d/xmipp_volume_apply_deform_sph/xmipp_volume_center/xmipp_volume_consensus/xmipp_volume_correct_bfactor/xmipp_volume_deform_sph/xmipp_volume_find_symmetry/xmipp_volume_from_pdb/xmipp_volume_halves_restoration/xmipp_volume_initial_simulated_annealing/xmipp_volume_local_sharpening/xmipp_volume_segment/xmipp_volume_structure_factor/xmipp_volume_subtraction/xmipp_volume_to_pseudoatoms/xmipp_volume_to_web/xmipp_volumeset_align

filetypes:
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