Implementation of the RNApuzzler RNA secondary structure layout algorithm [23]. More...
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Data Structures | |
| struct | vrna_plot_options_puzzler_t |
| Options data structure for RNApuzzler algorithm implementation. More... | |
Functions | |
| int | vrna_plot_coords_puzzler (const char *structure, float **x, float **y, double **arc_coords, vrna_plot_options_puzzler_t *options) |
| Compute nucleotide coordinates for secondary structure plot using the RNApuzzler algorithm [23]. More... | |
| int | vrna_plot_coords_puzzler_pt (short const *const pair_table, float **x, float **y, double **arc_coords, vrna_plot_options_puzzler_t *puzzler) |
| Compute nucleotide coordinates for secondary structure plot using the RNApuzzler algorithm [23]. More... | |
| vrna_plot_options_puzzler_t * | vrna_plot_options_puzzler (void) |
| Create an RNApuzzler options data structure. More... | |
| void | vrna_plot_options_puzzler_free (vrna_plot_options_puzzler_t *options) |
| Free memory occupied by an RNApuzzler options data structure. More... | |
Detailed Description
Implementation of the RNApuzzler RNA secondary structure layout algorithm [23].
