combinatorics.h File Reference

Various implementations that deal with combinatorial aspects of objects. More...

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Functions
unsigned int **	vrna_enumerate_necklaces (const unsigned int *type_counts)
	Enumerate all necklaces with fixed content. More...
unsigned int	vrna_rotational_symmetry_num (const unsigned int *string, size_t string_length)
	Determine the order of rotational symmetry for a string of objects represented by natural numbers. More...
unsigned int	vrna_rotational_symmetry_pos_num (const unsigned int *string, size_t string_length, unsigned int **positions)
	Determine the order of rotational symmetry for a string of objects represented by natural numbers. More...
unsigned int	vrna_rotational_symmetry (const char *string)
	Determine the order of rotational symmetry for a NULL-terminated string of ASCII characters. More...
unsigned int	vrna_rotational_symmetry_pos (const char *string, unsigned int **positions)
	Determine the order of rotational symmetry for a NULL-terminated string of ASCII characters. More...
unsigned int	vrna_rotational_symmetry_db (vrna_fold_compound_t *fc, const char *structure)
	Determine the order of rotational symmetry for a dot-bracket structure. More...
unsigned int	vrna_rotational_symmetry_db_pos (vrna_fold_compound_t *fc, const char *structure, unsigned int **positions)
	Determine the order of rotational symmetry for a dot-bracket structure. More...

Detailed Description

Various implementations that deal with combinatorial aspects of objects.

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