The RNA folding grammar as implemented in RNAlib. More...

Detailed Description

The RNA folding grammar as implemented in RNAlib.

Collaboration diagram for The RNA Folding Grammar:

Modules
	Fine-tuning of the Implemented Models
	Functions and data structures to fine-tune the implemented secondary structure evaluation model.

	Energy Parameters
	All relevant functions to retrieve and copy pre-calculated energy parameter sets as well as reading/writing the energy parameter set from/to file(s).

	Extending the Folding Grammar with Additional Domains
	This module covers simple and straight-forward extensions to the RNA folding grammar.

	Constraining the RNA Folding Grammar
	This module provides general functions that allow for an easy control of constrained secondary structure prediction and evaluation.

Files
file	grammar.h
	Implementations for the RNA folding grammar.

Data Structure Documentation

struct vrna_gr_aux_s

Data Fields
vrna_callback_gr_cond *	cb_proc
	A callback for pre- and post-processing of auxiliary grammar rules.