io.h

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#ifndef VIENNA_RNA_PACKAGE_PARAMS_IO_H
#define VIENNA_RNA_PACKAGE_PARAMS_IO_H

#ifdef VRNA_WARN_DEPRECATED
# if defined(__clang__)
#  define DEPRECATED(func, msg) func __attribute__ ((deprecated("", msg)))
# elif defined(__GNUC__)
#  define DEPRECATED(func, msg) func __attribute__ ((deprecated(msg)))
# else
#  define DEPRECATED(func, msg) func
# endif
#else
# define DEPRECATED(func, msg) func
#endif

#define VRNA_PARAMETER_FORMAT_DEFAULT     0


int
vrna_params_load(const char   fname[],
                 unsigned int options);


int
vrna_params_save(const char   fname[],
                 unsigned int options);


int
vrna_params_load_from_string(const char   *string,
                             const char   *name,
                             unsigned int options);


int
vrna_params_load_defaults(void);


int
vrna_params_load_RNA_Turner2004(void);


int
vrna_params_load_RNA_Turner1999(void);


int
vrna_params_load_RNA_Andronescu2007(void);


int
vrna_params_load_RNA_Langdon2018(void);


int
vrna_params_load_RNA_misc_special_hairpins(void);


int
vrna_params_load_DNA_Mathews2004(void);


int
vrna_params_load_DNA_Mathews1999(void);


#ifndef VRNA_DISABLE_BACKWARD_COMPATIBILITY

enum parset {
  UNKNOWN= -1, QUIT,
  S, S_H, HP, HP_H, B, B_H, IL, IL_H, MMH, MMH_H, MMI, MMI_H,
  MMI1N, MMI1N_H, MMI23, MMI23_H, MMM, MMM_H, MME, MME_H, D5, D5_H, D3, D3_H,
  INT11, INT11_H, INT21, INT21_H, INT22, INT22_H, ML, TL,
  TRI, HEX, NIN, MISC
};


const char *
last_parameter_file(void);


DEPRECATED(void
           read_parameter_file(const char fname[]),
           "Use vrna_params_load() instead!");


DEPRECATED(void
           write_parameter_file(const char fname[]),
           "Use vrna_params_save() instead!");


enum  parset
gettype(const char *ident);


char *
settype(enum parset s);


#endif

#endif