io.h File Reference

Read and write energy parameter files. More...

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Macros
#define	VRNA_PARAMETER_FORMAT_DEFAULT   0
	Default Energy Parameter File format. More...

Functions
int	vrna_params_load (const char fname[], unsigned int options)
	Load energy parameters from a file. More...
int	vrna_params_save (const char fname[], unsigned int options)
	Save energy parameters to a file. More...
int	vrna_params_load_from_string (const char *string, const char *name, unsigned int options)
	Load energy paramters from string. More...
int	vrna_params_load_defaults (void)
	Load default RNA energy parameter set. More...
int	vrna_params_load_RNA_Turner2004 (void)
	Load Turner 2004 RNA energy parameter set. More...
int	vrna_params_load_RNA_Turner1999 (void)
	Load Turner 1999 RNA energy parameter set. More...
int	vrna_params_load_RNA_Andronescu2007 (void)
	Load Andronsecu 2007 RNA energy parameter set. More...
int	vrna_params_load_RNA_Langdon2018 (void)
	Load Langdon 2018 RNA energy parameter set. More...
int	vrna_params_load_RNA_misc_special_hairpins (void)
	Load Misc Special Hairpin RNA energy parameter set. More...
int	vrna_params_load_DNA_Mathews2004 (void)
	Load Mathews 2004 DNA energy parameter set. More...
int	vrna_params_load_DNA_Mathews1999 (void)
	Load Mathews 1999 DNA energy parameter set. More...
const char *	last_parameter_file (void)
	Get the file name of the parameter file that was most recently loaded. More...
void	read_parameter_file (const char fname[])
	Read energy parameters from a file. More...
void	write_parameter_file (const char fname[])
	Write energy parameters to a file. More...

Detailed Description

Read and write energy parameter files.