structures.h File Reference

Various functions for plotting RNA secondary structures. More...

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Functions
int	vrna_file_PS_rnaplot (const char *seq, const char *structure, const char *file, vrna_md_t *md_p)
	Produce a secondary structure graph in PostScript and write it to 'filename'. More...
int	vrna_file_PS_rnaplot_a (const char *seq, const char *structure, const char *file, const char *pre, const char *post, vrna_md_t *md_p)
	Produce a secondary structure graph in PostScript including additional annotation macros and write it to 'filename'. More...
int	gmlRNA (char *string, char *structure, char *ssfile, char option)
	Produce a secondary structure graph in Graph Meta Language (gml) and write it to a file. More...
int	ssv_rna_plot (char *string, char *structure, char *ssfile)
	Produce a secondary structure graph in SStructView format. More...
int	svg_rna_plot (char *string, char *structure, char *ssfile)
	Produce a secondary structure plot in SVG format and write it to a file. More...
int	xrna_plot (char *string, char *structure, char *ssfile)
	Produce a secondary structure plot for further editing in XRNA. More...
int	PS_rna_plot (char *string, char *structure, char *file)
	Produce a secondary structure graph in PostScript and write it to 'filename'. More...
int	PS_rna_plot_a (char *string, char *structure, char *file, char *pre, char *post)
	Produce a secondary structure graph in PostScript including additional annotation macros and write it to 'filename'. More...
int	PS_rna_plot_a_gquad (char *string, char *structure, char *ssfile, char *pre, char *post)
	Produce a secondary structure graph in PostScript including additional annotation macros and write it to 'filename' (detect and draw g-quadruplexes) More...

Detailed Description

Various functions for plotting RNA secondary structures.