Various utilities to assist in plotting secondary structures and consensus structures. More...

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Functions
char **	vrna_annotate_covar_db (const char *alignment, const char structure, vrna_md_t *md_p)
	Produce covariance annotation for an alignment given a secondary structure.

vrna_cpair_t *	vrna_annotate_covar_pairs (const char *alignment, vrna_ep_t pl, vrna_ep_t mfel, double threshold, vrna_md_t md)
	Produce covariance annotation for an alignment given a set of base pairs.

Detailed Description

Various utilities to assist in plotting secondary structures and consensus structures.

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Functions