#include <Bpp/Seq/Io/Maf/MafStatistics.h>
#include <Bpp/Seq/Container/SiteContainer.h>
#include <Bpp/Phyl/Model/SubstitutionModel.h>
#include <Bpp/Phyl/Model/SubstitutionModelSetTools.h>
#include <Bpp/Phyl/Model/FrequenciesSet/NucleotideFrequenciesSet.h>
#include <Bpp/Phyl/Tree.h>
#include <Bpp/Phyl/Likelihood/DiscreteRatesAcrossSitesTreeLikelihood.h>
#include <Bpp/Numeric/Prob/DiscreteDistribution.h>

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Classes
class	bpp::MaximumLikelihoodModelFitMafStatistics
	Fit a substitution model. More...

Namespaces
	bpp

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