OptimizationTools.cpp File Reference

#include "OptimizationTools.h"
#include "Likelihood/PseudoNewtonOptimizer.h"
#include "Likelihood/GlobalClockTreeLikelihoodFunctionWrapper.h"
#include "NNISearchable.h"
#include "NNITopologySearch.h"
#include "Io/Newick.h"
#include <Bpp/App/ApplicationTools.h>
#include <Bpp/Numeric/ParameterList.h>
#include <Bpp/Numeric/Function/BfgsMultiDimensions.h>
#include <Bpp/Numeric/Function/ReparametrizationFunctionWrapper.h>
#include <Bpp/Numeric/Function/ThreePointsNumericalDerivative.h>
#include <Bpp/Numeric/Function/ConjugateGradientMultiDimensions.h>
#include <Bpp/Numeric/Function/TwoPointsNumericalDerivative.h>
#include <Bpp/Numeric/Function/DownhillSimplexMethod.h>
#include <Bpp/Seq/Io/Fasta.h>

Include dependency graph for OptimizationTools.cpp:

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