bpp::AbstractTreeParsimonyData Member List

This is the complete list of members for bpp::AbstractTreeParsimonyData, including all inherited members.

AbstractTreeParsimonyData(const TreeTemplate< Node > *tree)	bpp::AbstractTreeParsimonyData	inline
AbstractTreeParsimonyData(const AbstractTreeParsimonyData &atpd)	bpp::AbstractTreeParsimonyData	inline
clone() const =0	bpp::TreeParsimonyData	pure virtual
getArrayPosition(int parentId, int sonId, size_t currentPosition) const =0	bpp::TreeParsimonyData	pure virtual
getNodeData(int nodeId)=0	bpp::TreeParsimonyData	pure virtual
getNodeData(int nodeId) const =0	bpp::TreeParsimonyData	pure virtual
getRootArrayPosition(size_t site) const	bpp::AbstractTreeParsimonyData	inlinevirtual
getTree() const	bpp::AbstractTreeParsimonyData	inlinevirtual
getTreeP_() const	bpp::AbstractTreeParsimonyData	inlineprotected
getWeight(size_t pos) const	bpp::AbstractTreeParsimonyData	inline
operator=(const AbstractTreeParsimonyData &atpd)	bpp::AbstractTreeParsimonyData	inline
rootPatternLinks_	bpp::AbstractTreeParsimonyData	protected
rootWeights_	bpp::AbstractTreeParsimonyData	protected
setTreeP_(const TreeTemplate< Node > *tree)	bpp::AbstractTreeParsimonyData	inlineprotected
tree_	bpp::AbstractTreeParsimonyData	protected
TreeParsimonyData()	bpp::TreeParsimonyData	inline
~AbstractTreeParsimonyData()	bpp::AbstractTreeParsimonyData	inlinevirtual
~TreeParsimonyData()	bpp::TreeParsimonyData	inlinevirtual