44 #include "../Sequence.h" 85 return "Sequences following the poly format as describe in the phred documentation.";
91 #endif // _PHREDPOLY_H_ const std::string getFormatName() const
This alphabet is used to deal NumericAlphabet.
const std::string getFormatDescription() const
The poly sequence file format from phred software.
const std::string getDataType() const
PhredPoly(double ratio=0.8)
Build a new PhredPoly object.
bool nextSequence(std::istream &input, Sequence &seq) const
Read sequence from stream.
The ISequenceStream interface.