Partial implementation of the SiteIterator interface, allowing to loop over a site container. More...

#include <Bpp/Seq/Container/SiteContainerIterator.h>

Inheritance diagram for bpp::AbstractSiteContainerIterator:

Collaboration diagram for bpp::AbstractSiteContainerIterator:

Public Member Functions
	AbstractSiteContainerIterator (const SiteContainer &sites)

	AbstractSiteContainerIterator (const AbstractSiteContainerIterator &asi)

AbstractSiteContainerIterator &	operator= (const AbstractSiteContainerIterator &asi)

virtual	~AbstractSiteContainerIterator ()

virtual const Site *	nextSite ()=0

virtual bool	hasMoreSites () const =0

Protected Attributes
const SiteContainer *	sites_

int	currentPosition_

Detailed Description

Partial implementation of the SiteIterator interface, allowing to loop over a site container.

Definition at line 53 of file SiteContainerIterator.h.

Constructor & Destructor Documentation

◆ AbstractSiteContainerIterator() [1/2]

AbstractSiteContainerIterator::AbstractSiteContainerIterator ( const SiteContainer & sites )

Definition at line 52 of file SiteContainerIterator.cpp.

◆ AbstractSiteContainerIterator() [2/2]

bpp::AbstractSiteContainerIterator::AbstractSiteContainerIterator ( const AbstractSiteContainerIterator & asi )

inline

Definition at line 63 of file SiteContainerIterator.h.

◆ ~AbstractSiteContainerIterator()

virtual bpp::AbstractSiteContainerIterator::~AbstractSiteContainerIterator ( )

inlinevirtual

Definition at line 74 of file SiteContainerIterator.h.

Member Function Documentation

◆ hasMoreSites()

virtual bool bpp::ConstSiteIterator::hasMoreSites ( ) const

pure virtualinherited

Implemented in bpp::CompleteSiteContainerIterator, bpp::NoGapSiteContainerIterator, and bpp::SimpleSiteContainerIterator.

◆ nextSite()

virtual const Site* bpp::ConstSiteIterator::nextSite ( )

pure virtualinherited

Implemented in bpp::CompleteSiteContainerIterator, bpp::NoGapSiteContainerIterator, and bpp::SimpleSiteContainerIterator.

◆ operator=()

AbstractSiteContainerIterator& bpp::AbstractSiteContainerIterator::operator= ( const AbstractSiteContainerIterator & asi )

inline

Definition at line 67 of file SiteContainerIterator.h.

References currentPosition_, and sites_.

Member Data Documentation

◆ currentPosition_

int bpp::AbstractSiteContainerIterator::currentPosition_

protected

Definition at line 58 of file SiteContainerIterator.h.

Referenced by bpp::CompleteSiteContainerIterator::CompleteSiteContainerIterator(), bpp::SimpleSiteContainerIterator::nextSite(), bpp::NoGapSiteContainerIterator::nextSite(), bpp::CompleteSiteContainerIterator::nextSite(), bpp::NoGapSiteContainerIterator::NoGapSiteContainerIterator(), and operator=().

◆ sites_

const SiteContainer* bpp::AbstractSiteContainerIterator::sites_