bpp::GranthamAAChemicalDistance Member List

This is the complete list of members for bpp::GranthamAAChemicalDistance, including all inherited members.

alpha_	bpp::GranthamAAChemicalDistance	private
AlphabetIndex2()	bpp::AlphabetIndex2	inline
clone() const	bpp::GranthamAAChemicalDistance	inlinevirtual
distanceMatrix_	bpp::GranthamAAChemicalDistance	private
getAlphabet() const	bpp::GranthamAAChemicalDistance	inlinevirtual
getIndex(int state1, int state2) const	bpp::GranthamAAChemicalDistance	virtual
getIndex(const std::string &state1, const std::string &state2) const	bpp::GranthamAAChemicalDistance	virtual
getIndexMatrix() const	bpp::GranthamAAChemicalDistance	virtual
GranthamAAChemicalDistance()	bpp::GranthamAAChemicalDistance
GranthamAAChemicalDistance(const GranthamAAChemicalDistance &gd)	bpp::GranthamAAChemicalDistance	inline
isSymmetric() const	bpp::GranthamAAChemicalDistance	inlinevirtual
operator=(const GranthamAAChemicalDistance &gd)	bpp::GranthamAAChemicalDistance	inline
setPC1Sign(bool yn)	bpp::GranthamAAChemicalDistance	inline
setSymmetric(bool yn)	bpp::GranthamAAChemicalDistance	inline
sign_	bpp::GranthamAAChemicalDistance	private
SIGN_ARBITRARY	bpp::GranthamAAChemicalDistance	static
SIGN_NONE	bpp::GranthamAAChemicalDistance	static
SIGN_PC1	bpp::GranthamAAChemicalDistance	static
signMatrix_	bpp::GranthamAAChemicalDistance	private
~AlphabetIndex2()	bpp::AlphabetIndex2	inlinevirtual
~GranthamAAChemicalDistance()	bpp::GranthamAAChemicalDistance	virtual