bpp::SequenceNotAlignedException Class Reference

Exception thrown when a sequence is not align with others. More...

#include <Bpp/Seq/SequenceExceptions.h>

Inheritance diagram for bpp::SequenceNotAlignedException:

Collaboration diagram for bpp::SequenceNotAlignedException:

Public Member Functions
	SequenceNotAlignedException (const std::string &text, const Sequence *seq)
	Build a new SequenceNotAlignedException object. More...
virtual	~SequenceNotAlignedException () throw ()
virtual const Sequence *	getSequence () const
	Get the sequence that threw the exception. More...

Detailed Description

Exception thrown when a sequence is not align with others.

Typically, this may occur when you try to add a bad sequence to a site container.

Definition at line 141 of file SequenceExceptions.h.

Constructor & Destructor Documentation

SequenceNotAlignedException()

SequenceNotAlignedException::SequenceNotAlignedException	(	const std::string &	text,
		const Sequence *	seq
	)

Build a new SequenceNotAlignedException object.

Parameters

text	A message to be passed to the exception hierarchy.
seq	A const pointer toward the sequence that threw the exception.

Definition at line 64 of file SequenceExceptions.cpp.

~SequenceNotAlignedException()

virtual bpp::SequenceNotAlignedException::~SequenceNotAlignedException ( ) throw ( )

inlinevirtual

Definition at line 155 of file SequenceExceptions.h.

Member Function Documentation

getSequence()

virtual const Sequence* bpp::SequenceException::getSequence ( ) const

inlinevirtualinherited

Get the sequence that threw the exception.

Returns

A const pointer toward the sequence.

Definition at line 93 of file SequenceExceptions.h.

References bpp::SequenceException::sequence_.

---

The documentation for this class was generated from the following files:

• Bpp/Seq/SequenceExceptions.h
• Bpp/Seq/SequenceExceptions.cpp