bpp-seq
2.2.0
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This is the complete list of members for bpp::Stockholm, including all inherited members.
AbstractOAlignment() | bpp::AbstractOAlignment | inline |
checkNames() const | bpp::Stockholm | inline |
checkNames(bool yn) | bpp::Stockholm | inline |
checkNames_ | bpp::Stockholm | private |
getDataType() const | bpp::IOSequence | inline |
getFormatDescription() const | bpp::Stockholm | inline |
getFormatName() const | bpp::Stockholm | inline |
IOSequence() | bpp::IOSequence | inline |
OAlignment() | bpp::OAlignment | inline |
Stockholm(bool checkSequenceNames=true) | bpp::Stockholm | inline |
writeAlignment(std::ostream &output, const SiteContainer &sc) const | bpp::Stockholm | virtual |
writeAlignment(const std::string &path, const SiteContainer &sc, bool overwrite=true) const | bpp::Stockholm | inlinevirtual |
~AbstractOAlignment() | bpp::AbstractOAlignment | inlinevirtual |
~IOSequence() | bpp::IOSequence | inlinevirtual |
~OAlignment() | bpp::OAlignment | inlinevirtual |
~Stockholm() | bpp::Stockholm | inlinevirtual |