This section now details the specific options for each program in the Bio++ Program suite.
• bppml | Bio++ Maximum Likelihood. | |
• bppseqgen | Bio++ Sequence Generator. | |
• bppancestor | Bio++ Ancestral Sequences and Rates reconstruction. | |
• bppmixedlikelihoods | Bio++ Site-Likelihoods Inside Mixed Models. | |
• bppdist | Bio++ Distance Methods. | |
• bpppars | Bio++ Maximum Parsimony. | |
• bppconsense | Bio++ Consensus Trees. | |
• bppphysamp | Bio++ Phylogenetic Sampler. | |
• bppreroot | Bio++ Serial Tree Re-rooting. | |
• bppseqman | Bio++ Sequences Manipulation. | |
• bppalnscore | Bio++ Alignment Scoring | |
• bpptreedraw | Bio++ Tree Drawing. |