43 #include "../AbstractBiblioSubstitutionModel.h" 84 std::auto_ptr<CodonDistancePhaseFrequenciesSubstitutionModel>
pmodel_;
95 #ifndef NO_VIRTUAL_COV 103 std::string
getName()
const {
return "MG94"; }
Interface for all substitution models.
SubstitutionModel & getModel()
Partial implementation of the SubstitutionModel interface for models that are set for matching the bi...
const SubstitutionModel & getModel() const
Parametrize a set of state frequencies.
MG94 & operator=(const MG94 &mg94)
Interface for reversible substitution models.
The Muse and Gaut (1994) substitution model for codons.
std::string getName() const
Get the name of the model.
MG94(const GeneticCode *gc, FrequenciesSet *codonFreqs)
std::auto_ptr< CodonDistancePhaseFrequenciesSubstitutionModel > pmodel_