PhylogeneticsApplicationTools.h File Reference

#include "../Tree.h"
#include "../Model/SubstitutionModel.h"
#include "../Model/SubstitutionModelSet.h"
#include "../Model/MixedSubstitutionModelSet.h"
#include "../Model/MarkovModulatedSubstitutionModel.h"
#include "../Likelihood/HomogeneousTreeLikelihood.h"
#include "../Likelihood/ClockTreeLikelihood.h"
#include "../Mapping/SubstitutionCount.h"
#include <Bpp/Text/TextTools.h>
#include <Bpp/Text/StringTokenizer.h>
#include <Bpp/Io/OutputStream.h>
#include <Bpp/Numeric/Prob/DiscreteDistribution.h>
#include <Bpp/Numeric/Prob/MultipleDiscreteDistribution.h>
#include <Bpp/Numeric/Function/Optimizer.h>
#include <Bpp/Seq/Container/SiteContainer.h>
#include <Bpp/Seq/Container/VectorSiteContainer.h>
#include <string>
#include <map>

Include dependency graph for PhylogeneticsApplicationTools.h:

This graph shows which files directly or indirectly include this file:

Go to the source code of this file.

Classes
class	bpp::PhylogeneticsApplicationTools
	This class provides some common tools for applications. More...

Namespaces
	bpp