59 for (
size_t i = 0; i < numberOfSites; i++) {
virtual void setNumberOfSites(size_t numberOfSites)
virtual void setTree(const Tree &tree)
(Re)-set the phylogenetic tree associated to this mapping.
size_t getNumberOfBranches() const
void setTree(const Tree &tree)
size_t getNumberOfSubstitutionTypes() const
Interface for phylogenetic tree objects.
std::vector< std::vector< std::vector< double > > > mapping_
Substitution numbers storage.
virtual void setNumberOfSites(size_t numberOfSites)
size_t getNumberOfSites() const