bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription Class Reference

#include <Bpp/Phyl/Likelihood/AbstractTreeLikelihood.h>

Inheritance diagram for bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription:

Collaboration diagram for bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription:

Public Member Functions
	ConstNoPartitionSiteModelDescription (const SubstitutionModel *model, const std::vector< int > nodesId)
	ConstNoPartitionSiteModelDescription (const ConstNoPartitionSiteModelDescription &smd)
ConstNoPartitionSiteModelDescription &	operator= (const ConstNoPartitionSiteModelDescription &smd)
const SubstitutionModel *	getModel () const
BranchIterator *	getNewBranchIterator () const

Private Attributes
const SubstitutionModel *	model_
std::vector< int >	nodesId_

Detailed Description

Definition at line 190 of file AbstractTreeLikelihood.h.

Constructor & Destructor Documentation

ConstNoPartitionSiteModelDescription() [1/2]

bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::ConstNoPartitionSiteModelDescription ( const SubstitutionModel *  model, const std::vector< int >  nodesId  )

inline

Definition at line 198 of file AbstractTreeLikelihood.h.

ConstNoPartitionSiteModelDescription() [2/2]

bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::ConstNoPartitionSiteModelDescription ( const ConstNoPartitionSiteModelDescription &  smd )

inline

Definition at line 201 of file AbstractTreeLikelihood.h.

Member Function Documentation

getModel()

const SubstitutionModel* bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::getModel ( ) const

inlinevirtual

Implements bpp::TreeLikelihood::ConstSiteModelDescription.

Definition at line 214 of file AbstractTreeLikelihood.h.

References model_.

getNewBranchIterator()

BranchIterator* bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::getNewBranchIterator ( ) const

inlinevirtual

Implements bpp::TreeLikelihood::ConstSiteModelDescription.

Definition at line 216 of file AbstractTreeLikelihood.h.

References nodesId_.

operator=()

ConstNoPartitionSiteModelDescription& bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::operator= ( const ConstNoPartitionSiteModelDescription &  smd )

inline

Definition at line 206 of file AbstractTreeLikelihood.h.

References model_, and nodesId_.

Member Data Documentation

model_

const SubstitutionModel* bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::model_

private

Definition at line 194 of file AbstractTreeLikelihood.h.

Referenced by getModel(), and operator=().

nodesId_

std::vector<int> bpp::AbstractTreeLikelihood::ConstNoPartitionSiteModelDescription::nodesId_

private

Definition at line 195 of file AbstractTreeLikelihood.h.

Referenced by getNewBranchIterator(), and operator=().

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The documentation for this class was generated from the following file:

• Bpp/Phyl/Likelihood/AbstractTreeLikelihood.h