bpp::DRTreeParsimonyLeafData Class Reference

Parsimony data structure for a leaf. More...

#include <Bpp/Phyl/Parsimony/DRTreeParsimonyData.h>

Inheritance diagram for bpp::DRTreeParsimonyLeafData:

Collaboration diagram for bpp::DRTreeParsimonyLeafData:

Public Member Functions
	DRTreeParsimonyLeafData ()
	DRTreeParsimonyLeafData (const DRTreeParsimonyLeafData &tpld)
DRTreeParsimonyLeafData &	operator= (const DRTreeParsimonyLeafData &tpld)
DRTreeParsimonyLeafData *	clone () const
const Node *	getNode () const
	Get the node associated to this data structure. More...
void	setNode (const Node *node)
	Set the node associated to this data. More...
std::vector< Bitset > &	getBitsetsArray ()
const std::vector< Bitset > &	getBitsetsArray () const

Private Attributes
std::vector< Bitset >	leafBitsets_
const Node *	leaf_

Detailed Description

Parsimony data structure for a leaf.

This class is for use with the DRTreeParsimonyData class.

Store the vector of bitsets associated to a leaf.

See also

DRTreeParsimonyData

Definition at line 142 of file DRTreeParsimonyData.h.

Constructor & Destructor Documentation

DRTreeParsimonyLeafData() [1/2]

bpp::DRTreeParsimonyLeafData::DRTreeParsimonyLeafData ( )

inline

Definition at line 150 of file DRTreeParsimonyData.h.

Referenced by clone().

DRTreeParsimonyLeafData() [2/2]

bpp::DRTreeParsimonyLeafData::DRTreeParsimonyLeafData ( const DRTreeParsimonyLeafData &  tpld )

inline

Definition at line 155 of file DRTreeParsimonyData.h.

Member Function Documentation

clone()

DRTreeParsimonyLeafData* bpp::DRTreeParsimonyLeafData::clone ( ) const

inlinevirtual

Implements bpp::TreeParsimonyNodeData.

Definition at line 168 of file DRTreeParsimonyData.h.

References DRTreeParsimonyLeafData().

getBitsetsArray() [1/2]

std::vector<Bitset>& bpp::DRTreeParsimonyLeafData::getBitsetsArray ( )

inline

Definition at line 174 of file DRTreeParsimonyData.h.

References leafBitsets_.

Referenced by bpp::DRTreeParsimonyData::init().

getBitsetsArray() [2/2]

const std::vector<Bitset>& bpp::DRTreeParsimonyLeafData::getBitsetsArray ( ) const

inline

Definition at line 178 of file DRTreeParsimonyData.h.

References leafBitsets_.

getNode()

const Node* bpp::DRTreeParsimonyLeafData::getNode ( ) const

inlinevirtual

Get the node associated to this data structure.

Returns

The node associated to this structure.

Implements bpp::TreeParsimonyNodeData.

Definition at line 171 of file DRTreeParsimonyData.h.

References leaf_.

operator=()

DRTreeParsimonyLeafData& bpp::DRTreeParsimonyLeafData::operator= ( const DRTreeParsimonyLeafData &  tpld )

inline

Definition at line 160 of file DRTreeParsimonyData.h.

References leaf_, and leafBitsets_.

setNode()

void bpp::DRTreeParsimonyLeafData::setNode ( const Node *  node )

inlinevirtual

Set the node associated to this data.

Parameters

node	A pointer toward the node to be associated to this data.

Implements bpp::TreeParsimonyNodeData.

Definition at line 172 of file DRTreeParsimonyData.h.

References leaf_.

Referenced by bpp::DRTreeParsimonyData::init().

Member Data Documentation

leaf_

const Node* bpp::DRTreeParsimonyLeafData::leaf_

private

Definition at line 147 of file DRTreeParsimonyData.h.

Referenced by getNode(), operator=(), and setNode().

leafBitsets_

std::vector<Bitset> bpp::DRTreeParsimonyLeafData::leafBitsets_

mutableprivate

Definition at line 146 of file DRTreeParsimonyData.h.

Referenced by getBitsetsArray(), and operator=().

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The documentation for this class was generated from the following file:

• Bpp/Phyl/Parsimony/DRTreeParsimonyData.h