bpp::IOSubstitutionModelFactory Class Reference

Utilitary class for creating substitution model readers and writers. More...

#include <Bpp/Phyl/Io/IoSubstitutionModelFactory.h>

Collaboration diagram for bpp::IOSubstitutionModelFactory:

Public Member Functions
	IOSubstitutionModelFactory ()
	Creates a new factory object. More...
virtual	~IOSubstitutionModelFactory ()
virtual ISubstitutionModel *	createReader (const std::string &format) throw (Exception)
	Get a new dynamically created ISubstitutionModel object. More...
virtual OSubstitutionModel *	createWriter (const std::string &format) throw (Exception)
	Get a new dynamically created OSubstitutionModel object. More...

Static Public Attributes
static const std::string	BPPO_FORMAT = "Bpp0"

Detailed Description

Utilitary class for creating substitution model readers and writers.

See also

IOSequenceFactory

IOTreeFactory

Definition at line 60 of file IoSubstitutionModelFactory.h.

Constructor & Destructor Documentation

IOSubstitutionModelFactory()

bpp::IOSubstitutionModelFactory::IOSubstitutionModelFactory ( )

inline

Creates a new factory object.

Example:

ISubstitutionModel * modReader = IOSubstitutionModelFactory().createReader(IOSubstitutionModelFactory::BPP_FORMAT);
SubstitutionModel * model = modReader->read(...);
delete modReader;

Definition at line 77 of file IoSubstitutionModelFactory.h.

~IOSubstitutionModelFactory()

virtual bpp::IOSubstitutionModelFactory::~IOSubstitutionModelFactory ( )

inlinevirtual

Definition at line 78 of file IoSubstitutionModelFactory.h.

Member Function Documentation

createReader()

ISubstitutionModel * IOSubstitutionModelFactory::createReader ( const std::string &  format ) throw ( Exception )

virtual

Get a new dynamically created ISubstitutionModel object.

Parameters

format

The input file format.

Returns

A pointer toward a new ISubstitutionModel object.

Exceptions

Exception

If the format name do not match any available format.

Definition at line 46 of file IoSubstitutionModelFactory.cpp.

References bpp::BppOSubstitutionModelFormat::ALL.

createWriter()

OSubstitutionModel * IOSubstitutionModelFactory::createWriter ( const std::string &  format ) throw ( Exception )

virtual

Get a new dynamically created OSubstitutionModel object.

Parameters

format

The output file format.

Returns

A pointer toward a new OSubstitutionModel object.

Exceptions

Exception

If the format name do not match any available format.

Definition at line 52 of file IoSubstitutionModelFactory.cpp.

References bpp::BppOSubstitutionModelFormat::ALL.

Member Data Documentation

BPPO_FORMAT

const std::string IOSubstitutionModelFactory::BPPO_FORMAT = "Bpp0"

static

Definition at line 63 of file IoSubstitutionModelFactory.h.

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The documentation for this class was generated from the following files:

• Bpp/Phyl/Io/IoSubstitutionModelFactory.h
• Bpp/Phyl/Io/IoSubstitutionModelFactory.cpp