40 #ifndef _AASEA1030INDEX_H_ 41 #define _AASEA1030INDEX_H_ 44 #include "../Alphabet/ProteicAlphabet.h" 45 #include "../Alphabet/AlphabetTools.h" 93 return sea1030_[
static_cast<size_t>(state)];
107 #endif // _AASEA1030INDEX_H_ An alphabet exception thrown when trying to specify a bad char to the alphabet.
AASEA1030Index * clone() const
const Alphabet * getAlphabet() const
Get the alphabet associated to this index.
This alphabet is used to deal NumericAlphabet.
double getIndex(int state) const
Get the index associated to a state.
std::vector< double > sea1030_
virtual ~AASEA1030Index()
double getIndex(const std::string &state) const
Get the index associated to a state.
Percentage of amino acids having a Solvent Exposed Area between 10 and 30 Angström^2 for each type of...
One dimensionnal alphabet index interface.
std::vector< double > * getIndexVector() const
An alphabet exception thrown when trying to specify a bad int to the alphabet.
int charToInt(const std::string &state) const
Give the int description of a state given its string description.